HEADER IMMUNE SYSTEM 31-DEC-69 6PE9 TITLE Crystal Structure of CD40 complexed to FAB516 COMPND MOL_ID: 3; COMPND 2 MOLECULE: Tumor necrosis factor receptor superfamily member 5; COMPND 3 CHAIN: G, I, J, U, V; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.13 ANGSTORMS DBREF 6PE9 J 21 193 UNP P25942 TNR5_HUMAN 21 193 SEQRES 1 J 29 CYS HIS GLN HIS LYS TYR CYS ASP PRO ASN LEU GLY LEU SEQRES 2 J 29 ARG VAL GLN GLN LYS GLY THR SER GLU THR ASP THR ILE SEQRES 3 J 29 CYS THR CYS ATOM 1 N CYS J 77 339.671 -6.249 149.083 1.00126.64 ATOM 2 CA CYS J 77 338.234 -6.038 149.198 1.00122.84 ATOM 3 C CYS J 77 337.776 -4.773 148.468 1.00121.74 ATOM 4 O CYS J 77 338.394 -3.715 148.582 1.00124.76 ATOM 5 CB CYS J 77 337.887 -5.957 150.687 1.00122.09 ATOM 6 SG CYS J 77 336.147 -5.874 151.138 1.00126.40 ATOM 7 N HIS J 78 336.673 -4.884 147.726 1.00120.79 ATOM 8 CA HIS J 78 336.074 -3.734 147.055 1.00118.13 ATOM 9 C HIS J 78 335.698 -2.649 148.061 1.00120.50 ATOM 10 O HIS J 78 335.579 -2.899 149.259 1.00122.67 ATOM 11 CB HIS J 78 334.817 -4.149 146.297 1.00119.66 ATOM 12 CG HIS J 78 335.085 -4.911 145.043 1.00123.28 ATOM 13 ND1 HIS J 78 335.925 -4.446 144.054 1.00126.97 ATOM 14 CD2 HIS J 78 334.608 -6.099 144.604 1.00122.76 ATOM 15 CE1 HIS J 78 335.966 -5.321 143.067 1.00124.21 ATOM 16 NE2 HIS J 78 335.173 -6.332 143.374 1.00124.15 ATOM 17 N GLN J 79 335.471 -1.433 147.554 1.00121.98 ATOM 18 CA GLN J 79 335.146 -0.279 148.387 1.00120.40 ATOM 19 C GLN J 79 333.816 0.349 147.973 1.00117.80 ATOM 20 O GLN J 79 333.370 0.221 146.830 1.00117.75 ATOM 21 CB GLN J 79 336.258 0.776 148.330 1.00120.20 ATOM 22 N HIS J 80 333.202 1.061 148.919 1.00115.21 ATOM 23 CA HIS J 80 331.821 1.505 148.763 1.00110.81 ATOM 24 C HIS J 80 331.652 2.458 147.594 1.00112.33 ATOM 25 O HIS J 80 332.500 3.310 147.330 1.00116.45 ATOM 26 CB HIS J 80 331.338 2.191 150.034 1.00110.19 ATOM 27 CG HIS J 80 330.996 1.244 151.135 1.00110.68 ATOM 28 ND1 HIS J 80 331.401 1.438 152.436 1.00113.36 ATOM 29 CD2 HIS J 80 330.277 0.099 151.132 1.00111.35 ATOM 30 CE1 HIS J 80 330.954 0.449 153.187 1.00113.80 ATOM 31 NE2 HIS J 80 330.269 -0.377 152.420 1.00112.01 ATOM 32 N LYS J 81 330.533 2.310 146.900 1.00112.96 ATOM 33 CA LYS J 81 330.113 3.301 145.927 1.00113.85 ATOM 34 C LYS J 81 329.634 4.547 146.656 1.00117.30 ATOM 35 O LYS J 81 328.952 4.459 147.682 1.00114.92 ATOM 36 CB LYS J 81 329.000 2.728 145.051 1.00116.88 ATOM 37 CG LYS J 81 328.279 3.738 144.178 1.00118.77 ATOM 38 CD LYS J 81 326.785 3.440 144.115 1.00119.25 ATOM 39 CE LYS J 81 326.493 2.110 143.430 1.00123.95 ATOM 40 NZ LYS J 81 325.043 1.739 143.491 1.00123.90 ATOM 41 N TYR J 82 330.007 5.714 146.133 1.00122.24 ATOM 42 CA TYR J 82 329.675 6.993 146.750 1.00122.09 ATOM 43 C TYR J 82 328.562 7.680 145.977 1.00119.85 ATOM 44 O TYR J 82 328.566 7.702 144.743 1.00116.24 ATOM 45 CB TYR J 82 330.892 7.921 146.817 1.00124.79 ATOM 46 CG TYR J 82 330.599 9.274 147.442 1.00124.68 ATOM 47 CD1 TYR J 82 329.938 9.367 148.657 1.00124.54 ATOM 48 CD2 TYR J 82 330.992 10.454 146.822 1.00126.60 ATOM 49 CE1 TYR J 82 329.671 10.592 149.238 1.00123.35 ATOM 50 CE2 TYR J 82 330.726 11.688 147.398 1.00127.19 ATOM 51 CZ TYR J 82 330.065 11.747 148.606 1.00124.36 ATOM 52 OH TYR J 82 329.790 12.958 149.195 1.00123.42 ATOM 53 N CYS J 83 327.622 8.254 146.711 1.00121.77 ATOM 54 CA CYS J 83 326.485 8.952 146.130 1.00124.08 ATOM 55 C CYS J 83 326.587 10.422 146.508 1.00126.77 ATOM 56 O CYS J 83 326.030 10.869 147.511 1.00126.69 ATOM 57 CB CYS J 83 325.195 8.335 146.590 1.00125.68 ATOM 58 SG CYS J 83 325.127 6.613 146.140 1.00125.15 ATOM 59 N ASP J 84 327.311 11.160 145.688 1.00130.07 ATOM 60 CA ASP J 84 327.491 12.595 145.799 1.00131.61 ATOM 61 C ASP J 84 326.145 13.295 145.660 1.00131.92 ATOM 62 O ASP J 84 325.525 13.233 144.590 1.00130.66 ATOM 63 CB ASP J 84 328.471 13.062 144.720 1.00134.74 ATOM 64 CG ASP J 84 329.146 14.368 145.064 1.00138.72 ATOM 65 OD1 ASP J 84 329.133 14.747 146.255 1.00140.57 ATOM 66 OD2 ASP J 84 329.698 15.010 144.140 1.00139.05 ATOM 67 N PRO J 85 325.650 13.955 146.709 1.00131.93 ATOM 68 CA PRO J 85 324.470 14.810 146.526 1.00130.84 ATOM 69 C PRO J 85 324.726 15.923 145.536 1.00133.23 ATOM 70 O PRO J 85 323.780 16.409 144.906 1.00131.77 ATOM 71 CB PRO J 85 324.202 15.348 147.938 1.00128.70 ATOM 72 CG PRO J 85 325.528 15.307 148.607 1.00129.78 ATOM 73 CD PRO J 85 326.225 14.091 148.059 1.00131.02 ATOM 74 N ASN J 86 325.991 16.314 145.355 1.00136.53 ATOM 75 CA ASN J 86 326.420 17.272 144.342 1.00135.43 ATOM 76 C ASN J 86 326.214 16.753 142.926 1.00135.44 ATOM 77 O ASN J 86 326.614 17.427 141.971 1.00135.19 ATOM 78 CB ASN J 86 327.893 17.637 144.563 1.00135.04 ATOM 79 CG ASN J 86 328.179 18.116 145.989 1.00135.73 ATOM 80 OD1 ASN J 86 328.282 17.319 146.926 1.00131.07 ATOM 81 ND2 ASN J 86 328.323 19.425 146.149 1.00138.57 ATOM 82 N LEU J 87 325.620 15.565 142.782 1.00135.99 ATOM 83 CA LEU J 87 325.204 15.020 141.500 1.00136.66 ATOM 84 C LEU J 87 323.718 14.689 141.443 1.00134.72 ATOM 85 O LEU J 87 323.227 14.317 140.372 1.00134.11 ATOM 86 CB LEU J 87 326.012 13.752 141.171 1.00136.64 ATOM 87 CG LEU J 87 327.539 13.857 141.248 1.00136.85 ATOM 88 CD1 LEU J 87 328.189 12.488 141.158 1.00135.13 ATOM 89 CD2 LEU J 87 328.066 14.763 140.147 1.00139.49 ATOM 90 N GLY J 88 322.989 14.821 142.550 1.00133.53 ATOM 91 CA GLY J 88 321.592 14.440 142.598 1.00130.95 ATOM 92 C GLY J 88 321.394 13.019 143.089 1.00130.80 ATOM 93 O GLY J 88 320.710 12.224 142.439 1.00131.15 ATOM 94 N LEU J 89 321.989 12.686 144.234 1.00130.43 ATOM 95 CA LEU J 89 321.995 11.322 144.750 1.00128.11 ATOM 96 C LEU J 89 321.633 11.309 146.226 1.00127.88 ATOM 97 O LEU J 89 322.259 12.011 147.026 1.00127.56 ATOM 98 CB LEU J 89 323.365 10.667 144.556 1.00126.70 ATOM 99 CG LEU J 89 323.569 9.863 143.275 1.00124.79 ATOM 100 CD1 LEU J 89 322.434 8.869 143.120 1.00126.41 ATOM 101 CD2 LEU J 89 323.691 10.758 142.052 1.00128.09 ATOM 102 N ARG J 90 320.638 10.496 146.584 1.00127.17 ATOM 103 CA ARG J 90 320.281 10.235 147.972 1.00124.65 ATOM 104 C ARG J 90 320.542 8.768 148.294 1.00120.33 ATOM 105 O ARG J 90 320.385 7.891 147.442 1.00121.17 ATOM 106 CB ARG J 90 318.813 10.586 148.259 1.00123.04 ATOM 107 N VAL J 91 320.931 8.509 149.540 1.00115.91 ATOM 108 CA VAL J 91 321.440 7.203 149.956 1.00112.85 ATOM 109 C VAL J 91 320.250 6.315 150.310 1.00111.53 ATOM 110 O VAL J 91 319.682 6.429 151.397 1.00110.46 ATOM 111 CB VAL J 91 322.416 7.327 151.128 1.00109.88 ATOM 112 CG1 VAL J 91 322.861 5.965 151.590 1.00107.17 ATOM 113 CG2 VAL J 91 323.609 8.152 150.722 1.00112.72 ATOM 114 N GLN J 92 319.890 5.401 149.406 1.00111.97 ATOM 115 CA GLN J 92 318.766 4.511 149.665 1.00108.81 ATOM 116 C GLN J 92 319.121 3.389 150.627 1.00105.02 ATOM 117 O GLN J 92 318.238 2.900 151.333 1.00106.26 ATOM 118 CB GLN J 92 318.233 3.922 148.361 1.00112.76 ATOM 119 CG GLN J 92 316.875 3.249 148.512 1.00114.11 ATOM 120 CD GLN J 92 316.682 2.071 147.569 1.00115.93 ATOM 121 OE1 GLN J 92 316.053 2.200 146.518 1.00118.24 ATOM 122 NE2 GLN J 92 317.229 0.919 147.939 1.00113.99 ATOM 123 N GLN J 93 320.382 2.963 150.681 1.00105.63 ATOM 124 CA GLN J 93 320.788 1.924 151.631 1.00105.29 ATOM 125 C GLN J 93 322.281 2.039 151.892 1.00105.60 ATOM 126 O GLN J 93 323.083 1.850 150.974 1.00107.71 ATOM 127 CB GLN J 93 320.442 0.525 151.111 1.00109.67 ATOM 128 CG GLN J 93 320.735 -0.600 152.112 1.00109.15 ATOM 129 CD GLN J 93 320.774 -1.981 151.475 1.00110.02 ATOM 130 OE1 GLN J 93 319.751 -2.654 151.366 1.00111.17 ATOM 131 NE2 GLN J 93 321.962 -2.415 151.066 1.00111.15 ATOM 132 N LYS J 94 322.651 2.327 153.139 1.00103.39 ATOM 133 CA LYS J 94 324.055 2.497 153.484 1.00102.59 ATOM 134 C LYS J 94 324.829 1.222 153.187 1.00104.59 ATOM 135 O LYS J 94 324.347 0.116 153.429 1.00107.46 ATOM 136 CB LYS J 94 324.196 2.869 154.964 1.00 98.58 ATOM 137 N GLY J 95 326.031 1.378 152.645 1.00105.45 ATOM 138 CA GLY J 95 326.861 0.220 152.368 1.00108.34 ATOM 139 C GLY J 95 327.410 -0.401 153.643 1.00109.08 ATOM 140 O GLY J 95 327.822 0.290 154.575 1.00109.48 ATOM 141 N THR J 96 327.422 -1.727 153.675 1.00111.57 ATOM 142 CA THR J 96 327.903 -2.508 154.808 1.00111.01 ATOM 143 C THR J 96 329.079 -3.363 154.352 1.00110.56 ATOM 144 O THR J 96 329.610 -3.187 153.257 1.00111.68 ATOM 145 CB THR J 96 326.784 -3.371 155.392 1.00111.84 ATOM 146 OG1 THR J 96 326.592 -4.524 154.566 1.00111.17 ATOM 147 CG2 THR J 96 325.487 -2.585 155.446 1.00111.21 ATOM 148 N SER J 97 329.494 -4.293 155.208 1.00110.36 ATOM 149 CA SER J 97 330.617 -5.149 154.847 1.00111.83 ATOM 150 C SER J 97 330.269 -6.114 153.716 1.00113.04 ATOM 151 O SER J 97 331.154 -6.497 152.944 1.00113.20 ATOM 152 CB SER J 97 331.114 -5.912 156.078 1.00110.25 ATOM 153 OG SER J 97 330.043 -6.315 156.907 1.00108.41 ATOM 154 N GLU J 98 328.999 -6.512 153.588 1.00114.45 ATOM 155 CA GLU J 98 328.600 -7.530 152.618 1.00111.34 ATOM 156 C GLU J 98 327.595 -7.033 151.587 1.00108.92 ATOM 157 O GLU J 98 327.096 -7.839 150.796 1.00107.22 ATOM 158 CB GLU J 98 328.040 -8.769 153.328 1.00109.47 ATOM 159 CG GLU J 98 327.145 -8.470 154.518 1.00112.90 ATOM 160 CD GLU J 98 327.834 -8.730 155.856 1.00114.11 ATOM 161 OE1 GLU J 98 327.133 -8.880 156.878 1.00113.74 ATOM 162 OE2 GLU J 98 329.076 -8.818 155.888 1.00115.42 ATOM 163 N THR J 99 327.290 -5.738 151.565 1.00110.94 ATOM 164 CA THR J 99 326.436 -5.157 150.538 1.00113.09 ATOM 165 C THR J 99 327.051 -3.859 150.047 1.00114.40 ATOM 166 O THR J 99 327.612 -3.096 150.836 1.00115.07 ATOM 167 CB THR J 99 325.026 -4.856 151.052 1.00111.47 ATOM 168 OG1 THR J 99 325.116 -4.103 152.264 1.00110.30 ATOM 169 CG2 THR J 99 324.260 -6.132 151.306 1.00115.08 ATOM 170 N ASP J 100 326.929 -3.603 148.747 1.00113.95 ATOM 171 CA ASP J 100 327.317 -2.310 148.211 1.00113.48 ATOM 172 C ASP J 100 326.282 -1.260 148.616 1.00113.62 ATOM 173 O ASP J 100 325.332 -1.529 149.359 1.00112.52 ATOM 174 CB ASP J 100 327.473 -2.387 146.694 1.00115.25 ATOM 175 CG ASP J 100 328.362 -1.286 146.138 1.00116.24 ATOM 176 OD1 ASP J 100 328.957 -0.543 146.941 1.00114.55 ATOM 177 OD2 ASP J 100 328.472 -1.163 144.900 1.00117.19 ATOM 178 N THR J 101 326.474 -0.042 148.131 1.00112.43 ATOM 179 CA THR J 101 325.561 1.045 148.434 1.00114.35 ATOM 180 C THR J 101 324.524 1.167 147.323 1.00116.16 ATOM 181 O THR J 101 324.857 1.099 146.136 1.00115.94 ATOM 182 CB THR J 101 326.330 2.360 148.609 1.00115.27 ATOM 183 OG1 THR J 101 327.503 2.132 149.397 1.00111.53 ATOM 184 CG2 THR J 101 325.474 3.392 149.317 1.00115.26 ATOM 185 N ILE J 102 323.260 1.323 147.720 1.00116.20 ATOM 186 CA ILE J 102 322.133 1.476 146.802 1.00118.72 ATOM 187 C ILE J 102 321.650 2.916 146.896 1.00117.73 ATOM 188 O ILE J 102 321.437 3.425 148.003 1.00115.97 ATOM 189 CB ILE J 102 320.988 0.503 147.140 1.00116.30 ATOM 190 CG1 ILE J 102 321.513 -0.916 147.350 1.00115.35 ATOM 191 CG2 ILE J 102 319.940 0.507 146.039 1.00118.41 ATOM 192 CD1 ILE J 102 320.448 -1.894 147.796 1.00115.34 ATOM 193 N CYS J 103 321.453 3.567 145.747 1.00119.28 ATOM 194 CA CYS J 103 321.092 4.980 145.749 1.00122.53 ATOM 195 C CYS J 103 319.968 5.282 144.768 1.00125.42 ATOM 196 O CYS J 103 319.801 4.595 143.758 1.00129.59 ATOM 197 CB CYS J 103 322.304 5.855 145.436 1.00125.03 ATOM 198 SG CYS J 103 323.350 6.041 146.881 1.00129.76 ATOM 199 N THR J 104 319.203 6.336 145.085 1.00125.29 ATOM 200 CA THR J 104 318.089 6.802 144.261 1.00129.29 ATOM 201 C THR J 104 318.179 8.299 143.979 1.00129.50 ATOM 202 O THR J 104 319.211 8.933 144.230 1.00127.83 ATOM 203 CB THR J 104 316.736 6.497 144.922 1.00127.87 ATOM 204 OG1 THR J 104 316.821 6.718 146.335 1.00125.47 ATOM 205 CG2 THR J 104 316.287 5.061 144.639 1.00127.65 ATOM 206 N CYS J 105 317.100 8.864 143.442 1.00130.32 ATOM 207 CA CYS J 105 317.028 10.290 143.153 1.00130.85 ATOM 208 C CYS J 105 315.745 10.900 143.720 1.00126.66 ATOM 209 O CYS J 105 315.759 11.991 144.293 1.00122.64 ATOM 210 CB CYS J 105 317.109 10.530 141.644 1.00129.70 ATOM 211 SG CYS J 105 318.636 9.935 140.885 1.00124.79 TER