HEADER LIGASE 31-DEC-69 6Q8B TITLE Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with TITLE 2 5'-O-(N-(L-Leucyl)-Sulfamoyl)N3-methyluridine COMPND MOL_ID: 1; COMPND 2 MOLECULE: Leucine--tRNA ligase; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 EC: 6.1.1.4; COMPND 6 FRAGMENT: Leucyl-tRNA ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.20 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 591 REMARK 465 GLU A 592 REMARK 465 ASN A 593 REMARK 465 ASP A 594 REMARK 465 LYS A 595 REMARK 465 GLY A 596 REMARK 465 GLY A 597 REMARK 465 LYS A 598 REMARK 465 ASP A 599 REMARK 465 PHE A 610 REMARK 465 ASP A 611 REMARK 465 ASP A 612 REMARK 465 LYS A 613 REMARK 465 GLY A 614 REMARK 465 ARG A 615 REMARK 465 PRO A 616 REMARK 465 VAL A 617 REMARK 465 SER A 618 REMARK 465 ALA A 619 REMARK 465 VAL A 620 REMARK 465 LEU A 621 REMARK 465 LYS A 622 REMARK 465 ALA A 623 REMARK 465 ASP A 624 REMARK 465 GLY A 625 REMARK 465 LEU A 626 DBREF 6Q8B A 1 876 UNP A0A1D3HN A0A1D3HNX6_ 3 878 SEQRES 1 A 51 VAL VAL CYS GLU THR TYR TYR ARG GLU ASN ASP LYS GLY SEQRES 2 A 51 GLY LYS ASP TRP ILE ASN PRO ALA ASP VAL GLU LEU THR SEQRES 3 A 51 PHE ASP ASP LYS GLY ARG PRO VAL SER ALA VAL LEU LYS SEQRES 4 A 51 ALA ASP GLY LEU PRO VAL VAL ILE SER GLY THR GLU ATOM 1 N VAL A 583 -16.203 -7.160 -26.716 1.00 48.99 ATOM 2 CA VAL A 583 -16.780 -8.476 -26.503 1.00 60.39 ATOM 3 C VAL A 583 -17.019 -8.645 -25.010 1.00 60.44 ATOM 4 O VAL A 583 -16.105 -8.437 -24.205 1.00 47.37 ATOM 5 CB VAL A 583 -15.867 -9.586 -27.048 1.00 61.08 ATOM 6 CG1 VAL A 583 -16.449 -10.954 -26.725 1.00 61.16 ATOM 7 CG2 VAL A 583 -15.660 -9.386 -28.553 1.00 50.09 ATOM 8 N VAL A 584 -18.249 -9.016 -24.640 1.00 59.31 ATOM 9 CA VAL A 584 -18.625 -9.145 -23.240 1.00 47.90 ATOM 10 C VAL A 584 -19.067 -10.576 -22.957 1.00 57.35 ATOM 11 O VAL A 584 -19.396 -11.352 -23.861 1.00 49.47 ATOM 12 CB VAL A 584 -19.725 -8.144 -22.840 1.00 49.39 ATOM 13 CG1 VAL A 584 -19.235 -6.707 -23.074 1.00 43.59 ATOM 14 CG2 VAL A 584 -21.008 -8.424 -23.615 1.00 46.24 ATOM 15 N CYS A 585 -19.050 -10.922 -21.674 1.00 54.79 ATOM 16 CA CYS A 585 -19.361 -12.273 -21.242 1.00 54.77 ATOM 17 C CYS A 585 -19.803 -12.210 -19.794 1.00 46.94 ATOM 18 O CYS A 585 -19.370 -11.337 -19.040 1.00 46.76 ATOM 19 CB CYS A 585 -18.153 -13.213 -21.391 1.00 60.92 ATOM 20 SG CYS A 585 -18.449 -14.918 -20.840 1.00 67.24 ATOM 21 N GLU A 586 -20.682 -13.135 -19.426 1.00 51.14 ATOM 22 CA GLU A 586 -21.067 -13.318 -18.036 1.00 61.50 ATOM 23 C GLU A 586 -19.839 -13.608 -17.184 1.00 66.88 ATOM 24 O GLU A 586 -18.841 -14.161 -17.658 1.00 64.33 ATOM 25 CB GLU A 586 -22.062 -14.477 -17.919 1.00 74.74 ATOM 26 CG GLU A 586 -23.246 -14.249 -16.991 1.00 81.59 ATOM 27 CD GLU A 586 -24.436 -15.119 -17.367 1.00 88.95 ATOM 28 OE1 GLU A 586 -24.429 -16.323 -17.026 1.00 85.49 ATOM 29 OE2 GLU A 586 -25.372 -14.604 -18.024 1.00 92.08 ATOM 30 N THR A 587 -19.919 -13.226 -15.915 1.00 68.45 ATOM 31 CA THR A 587 -18.884 -13.511 -14.938 1.00 69.35 ATOM 32 C THR A 587 -19.424 -14.479 -13.893 1.00 69.16 ATOM 33 O THR A 587 -20.632 -14.712 -13.798 1.00 67.18 ATOM 34 CB THR A 587 -18.386 -12.226 -14.271 1.00 69.12 ATOM 35 OG1 THR A 587 -19.488 -11.574 -13.630 1.00 73.94 ATOM 36 CG2 THR A 587 -17.753 -11.297 -15.308 1.00 54.41 ATOM 37 N TYR A 588 -18.507 -15.070 -13.128 1.00 65.58 ATOM 38 CA TYR A 588 -18.850 -16.136 -12.192 1.00 65.94 ATOM 39 C TYR A 588 -17.844 -16.126 -11.053 1.00 76.60 ATOM 40 O TYR A 588 -16.655 -15.895 -11.280 1.00 76.49 ATOM 41 CB TYR A 588 -18.850 -17.522 -12.862 1.00 61.87 ATOM 42 CG TYR A 588 -19.630 -17.634 -14.168 1.00 60.77 ATOM 43 CD1 TYR A 588 -20.952 -18.061 -14.180 1.00 59.64 ATOM 44 CD2 TYR A 588 -19.039 -17.323 -15.385 1.00 59.55 ATOM 45 CE1 TYR A 588 -21.672 -18.158 -15.373 1.00 61.46 ATOM 46 CE2 TYR A 588 -19.748 -17.418 -16.579 1.00 59.74 ATOM 47 CZ TYR A 588 -21.065 -17.837 -16.570 1.00 61.48 ATOM 48 OH TYR A 588 -21.773 -17.935 -17.762 1.00 59.44 ATOM 49 N TYR A 589 -18.316 -16.390 -9.836 1.00 90.48 ATOM 50 CA TYR A 589 -17.402 -16.579 -8.704 1.00 98.78 ATOM 51 C TYR A 589 -17.956 -17.520 -7.620 1.00 95.44 ATOM 52 O TYR A 589 -19.117 -17.430 -7.209 1.00 90.58 ATOM 53 CB TYR A 589 -17.043 -15.232 -8.080 1.00103.04 ATOM 54 CG TYR A 589 -18.180 -14.603 -7.316 1.00109.13 ATOM 55 CD1 TYR A 589 -19.192 -13.924 -7.979 1.00105.72 ATOM 56 CD2 TYR A 589 -18.250 -14.699 -5.932 1.00111.85 ATOM 57 CE1 TYR A 589 -20.233 -13.352 -7.290 1.00105.81 ATOM 58 CE2 TYR A 589 -19.289 -14.129 -5.234 1.00112.04 ATOM 59 CZ TYR A 589 -20.279 -13.458 -5.919 1.00110.14 ATOM 60 OH TYR A 589 -21.318 -12.882 -5.234 1.00110.77 ATOM 61 N TRP A 599 -13.491 -15.672 -8.679 1.00 78.52 ATOM 62 CA TRP A 599 -13.832 -15.344 -10.059 1.00 81.64 ATOM 63 C TRP A 599 -13.403 -16.459 -11.015 1.00 82.09 ATOM 64 O TRP A 599 -12.231 -16.547 -11.407 1.00 67.92 ATOM 65 CB TRP A 599 -13.190 -14.018 -10.476 1.00 84.53 ATOM 66 CG TRP A 599 -13.869 -12.793 -9.903 1.00 94.87 ATOM 67 CD1 TRP A 599 -13.285 -11.814 -9.151 1.00 93.07 ATOM 68 CD2 TRP A 599 -15.252 -12.414 -10.046 1.00 99.89 ATOM 69 NE1 TRP A 599 -14.213 -10.858 -8.811 1.00 92.62 ATOM 70 CE2 TRP A 599 -15.426 -11.201 -9.347 1.00 96.67 ATOM 71 CE3 TRP A 599 -16.356 -12.982 -10.691 1.00 99.71 ATOM 72 CZ2 TRP A 599 -16.658 -10.549 -9.276 1.00 95.07 ATOM 73 CZ3 TRP A 599 -17.579 -12.332 -10.617 1.00 98.00 ATOM 74 CH2 TRP A 599 -17.718 -11.129 -9.916 1.00 96.84 ATOM 75 N ILE A 600 -14.376 -17.301 -11.397 1.00 85.08 ATOM 76 CA ILE A 600 -14.127 -18.520 -12.156 1.00 74.56 ATOM 77 C ILE A 600 -14.293 -18.240 -13.640 1.00 78.10 ATOM 78 O ILE A 600 -15.265 -17.607 -14.068 1.00 81.81 ATOM 79 CB ILE A 600 -15.071 -19.652 -11.705 1.00 76.76 ATOM 80 N ASN A 601 -13.352 -18.736 -14.429 1.00 73.10 ATOM 81 CA ASN A 601 -13.443 -18.606 -15.870 1.00 72.88 ATOM 82 C ASN A 601 -14.657 -19.375 -16.394 1.00 79.16 ATOM 83 O ASN A 601 -14.975 -20.454 -15.888 1.00 80.84 ATOM 84 CB ASN A 601 -12.163 -19.122 -16.525 1.00 73.66 ATOM 85 CG ASN A 601 -12.049 -18.723 -17.986 1.00 77.10 ATOM 86 OD1 ASN A 601 -12.426 -19.485 -18.879 1.00 76.71 ATOM 87 ND2 ASN A 601 -11.526 -17.523 -18.236 1.00 79.04 ATOM 88 N PRO A 602 -15.362 -18.835 -17.393 1.00 73.07 ATOM 89 CA PRO A 602 -16.539 -19.532 -17.946 1.00 75.79 ATOM 90 C PRO A 602 -16.264 -20.921 -18.533 1.00 83.42 ATOM 91 O PRO A 602 -17.232 -21.633 -18.848 1.00 74.39 ATOM 92 CB PRO A 602 -17.027 -18.568 -19.034 1.00 66.05 ATOM 93 CG PRO A 602 -16.632 -17.222 -18.501 1.00 70.43 ATOM 94 CD PRO A 602 -15.316 -17.421 -17.797 1.00 67.99 ATOM 95 N ALA A 603 -15.003 -21.319 -18.717 1.00 85.98 ATOM 96 CA ALA A 603 -14.707 -22.676 -19.163 1.00 87.89 ATOM 97 C ALA A 603 -14.613 -23.665 -18.010 1.00 96.61 ATOM 98 O ALA A 603 -14.608 -24.875 -18.256 1.00106.87 ATOM 99 CB ALA A 603 -13.413 -22.712 -19.984 1.00 75.53 ATOM 100 N ASP A 604 -14.534 -23.182 -16.771 1.00100.76 ATOM 101 CA ASP A 604 -14.642 -24.015 -15.580 1.00104.21 ATOM 102 C ASP A 604 -16.079 -24.147 -15.095 1.00106.61 ATOM 103 O ASP A 604 -16.312 -24.728 -14.030 1.00114.58 ATOM 104 CB ASP A 604 -13.783 -23.448 -14.440 1.00102.51 ATOM 105 CG ASP A 604 -12.364 -23.118 -14.872 1.00107.02 ATOM 106 OD1 ASP A 604 -11.762 -22.199 -14.274 1.00107.39 ATOM 107 OD2 ASP A 604 -11.849 -23.777 -15.800 1.00109.91 ATOM 108 N VAL A 605 -17.044 -23.608 -15.836 1.00102.25 ATOM 109 CA VAL A 605 -18.424 -23.516 -15.379 1.00 97.73 ATOM 110 C VAL A 605 -19.350 -24.088 -16.446 1.00 96.71 ATOM 111 O VAL A 605 -19.143 -23.878 -17.648 1.00 87.10 ATOM 112 CB VAL A 605 -18.825 -22.058 -15.042 1.00 84.57 ATOM 113 CG1 VAL A 605 -20.027 -22.040 -14.118 1.00 90.78 ATOM 114 CG2 VAL A 605 -17.674 -21.300 -14.396 1.00 73.74 ATOM 115 N GLU A 606 -20.354 -24.840 -15.997 1.00101.32 ATOM 116 CA GLU A 606 -21.535 -25.167 -16.783 1.00101.33 ATOM 117 C GLU A 606 -22.749 -24.971 -15.885 1.00105.21 ATOM 118 O GLU A 606 -22.653 -25.086 -14.657 1.00 98.82 ATOM 119 CB GLU A 606 -21.490 -26.606 -17.337 1.00 97.98 ATOM 120 N LEU A 607 -23.890 -24.661 -16.499 1.00111.11 ATOM 121 CA LEU A 607 -25.060 -24.235 -15.746 1.00118.05 ATOM 122 C LEU A 607 -26.269 -25.104 -16.066 1.00113.85 ATOM 123 O LEU A 607 -26.300 -25.843 -17.055 1.00110.92 ATOM 124 CB LEU A 607 -25.393 -22.760 -16.021 1.00123.04 ATOM 125 N THR A 608 -27.271 -24.993 -15.201 1.00110.35 ATOM 126 CA THR A 608 -28.528 -25.711 -15.346 1.00104.79 ATOM 127 C THR A 608 -29.386 -25.099 -16.449 1.00 98.77 ATOM 128 O THR A 608 -29.960 -25.811 -17.271 1.00 99.38 ATOM 129 CB THR A 608 -29.316 -25.708 -14.020 1.00102.75 ATOM 130 OG1 THR A 608 -29.606 -24.358 -13.634 1.00106.82 ATOM 131 CG2 THR A 608 -28.501 -26.361 -12.928 1.00 95.43 ATOM 132 N PRO A 626 -21.299 -25.602 -7.371 1.00125.70 ATOM 133 CA PRO A 626 -22.071 -24.408 -6.999 1.00122.06 ATOM 134 C PRO A 626 -21.251 -23.119 -7.046 1.00113.60 ATOM 135 O PRO A 626 -20.292 -22.985 -6.284 1.00108.52 ATOM 136 CB PRO A 626 -22.518 -24.715 -5.564 1.00122.25 ATOM 137 CG PRO A 626 -21.533 -25.717 -5.061 1.00124.05 ATOM 138 CD PRO A 626 -21.187 -26.557 -6.253 1.00125.62 ATOM 139 N VAL A 627 -21.634 -22.190 -7.930 1.00115.15 ATOM 140 CA VAL A 627 -20.954 -20.908 -8.093 1.00112.04 ATOM 141 C VAL A 627 -21.983 -19.820 -8.381 1.00105.52 ATOM 142 O VAL A 627 -23.117 -20.095 -8.781 1.00105.07 ATOM 143 CB VAL A 627 -19.896 -20.941 -9.221 1.00111.06 ATOM 144 N VAL A 628 -21.560 -18.569 -8.193 1.00 97.53 ATOM 145 CA VAL A 628 -22.438 -17.408 -8.331 1.00 93.71 ATOM 146 C VAL A 628 -22.334 -16.851 -9.749 1.00 87.40 ATOM 147 O VAL A 628 -21.278 -16.351 -10.157 1.00 82.05 ATOM 148 CB VAL A 628 -22.096 -16.328 -7.294 1.00 81.55 ATOM 149 N ILE A 629 -23.445 -16.907 -10.483 1.00 79.28 ATOM 150 CA ILE A 629 -23.510 -16.454 -11.876 1.00 82.41 ATOM 151 C ILE A 629 -23.802 -14.955 -11.848 1.00 90.70 ATOM 152 O ILE A 629 -24.956 -14.523 -11.802 1.00 90.64 ATOM 153 CB ILE A 629 -24.554 -17.231 -12.675 1.00 80.14 ATOM 154 N SER A 630 -22.735 -14.149 -11.913 1.00 89.55 ATOM 155 CA SER A 630 -22.817 -12.697 -11.773 1.00 86.42 ATOM 156 C SER A 630 -23.063 -11.980 -13.104 1.00 88.09 ATOM 157 O SER A 630 -23.633 -12.564 -14.033 1.00 91.29 ATOM 158 CB SER A 630 -21.541 -12.170 -11.118 1.00 81.73 ATOM 159 OG SER A 630 -21.522 -10.757 -11.124 1.00 81.10 ATOM 160 N GLY A 631 -22.625 -10.699 -13.214 1.00 74.16 ATOM 161 CA GLY A 631 -23.060 -9.845 -14.301 1.00 70.84 ATOM 162 C GLY A 631 -22.194 -9.899 -15.561 1.00 65.25 ATOM 163 O GLY A 631 -21.030 -10.299 -15.548 1.00 58.06 ATOM 164 N THR A 632 -22.788 -9.457 -16.670 1.00 65.84 ATOM 165 CA THR A 632 -22.132 -9.485 -17.975 1.00 56.17 ATOM 166 C THR A 632 -21.307 -8.215 -18.178 1.00 58.34 ATOM 167 O THR A 632 -21.810 -7.101 -17.996 1.00 56.22 ATOM 168 CB THR A 632 -23.176 -9.653 -19.082 1.00 53.65 ATOM 169 OG1 THR A 632 -23.856 -10.893 -18.888 1.00 53.72 ATOM 170 CG2 THR A 632 -22.524 -9.656 -20.479 1.00 50.82 ATOM 171 N GLU A 633 -20.032 -8.383 -18.528 1.00 57.04 ATOM 172 CA GLU A 633 -19.162 -7.231 -18.724 1.00 42.33 ATOM 173 C GLU A 633 -18.022 -7.619 -19.652 1.00 47.79 ATOM 174 O GLU A 633 -17.845 -8.794 -19.994 1.00 47.12 ATOM 175 CB GLU A 633 -18.644 -6.694 -17.386 1.00 55.32 ATOM 176 CG GLU A 633 -17.493 -7.475 -16.776 1.00 65.06 ATOM 177 CD GLU A 633 -16.984 -6.825 -15.498 1.00 67.63 ATOM 178 OE1 GLU A 633 -17.815 -6.214 -14.792 1.00 60.90 ATOM 179 OE2 GLU A 633 -15.767 -6.921 -15.205 1.00 68.39 ATOM 180 N L3U A 901 -0.503 -3.162 -28.591 1.00 37.54 ATOM 181 CA L3U A 901 -1.596 -2.170 -28.509 1.00 37.72 ATOM 182 C L3U A 901 -2.809 -2.880 -27.879 1.00 37.02 ATOM 183 O L3U A 901 -3.854 -2.331 -27.535 1.00 38.89 ATOM 184 CB L3U A 901 -1.925 -1.594 -29.886 1.00 38.09 ATOM 185 CG L3U A 901 -0.885 -0.600 -30.396 1.00 35.84 ATOM 186 CD1 L3U A 901 -0.859 0.614 -29.481 1.00 28.67 ATOM 187 CD2 L3U A 901 -1.202 -0.195 -31.825 1.00 31.79 ATOM 188 C1' L3U A 901 -8.282 -5.371 -29.460 1.00 48.76 ATOM 189 C2 L3U A 901 -10.457 -6.113 -28.697 1.00 60.27 ATOM 190 C2' L3U A 901 -7.722 -4.015 -29.064 1.00 47.02 ATOM 191 C3' L3U A 901 -6.547 -3.901 -30.045 1.00 41.72 ATOM 192 C3U L3U A 901 -12.689 -6.676 -27.907 1.00 58.02 ATOM 193 C4 L3U A 901 -10.768 -6.941 -26.392 1.00 59.48 ATOM 194 C4' L3U A 901 -6.075 -5.352 -30.193 1.00 39.42 ATOM 195 C5 L3U A 901 -9.352 -6.818 -26.213 1.00 47.42 ATOM 196 C5' L3U A 901 -4.790 -5.675 -29.469 1.00 39.11 ATOM 197 C6 L3U A 901 -8.579 -6.344 -27.202 1.00 49.58 ATOM 198 N1 L3U A 901 -9.113 -5.984 -28.412 1.00 48.23 ATOM 199 N3 L3U A 901 -11.248 -6.578 -27.655 1.00 61.78 ATOM 200 N3S L3U A 901 -2.664 -4.280 -27.647 1.00 36.40 ATOM 201 O1S L3U A 901 -4.404 -4.834 -25.904 1.00 38.62 ATOM 202 O2 L3U A 901 -10.929 -5.889 -29.797 1.00 57.45 ATOM 203 O2' L3U A 901 -8.744 -3.045 -29.234 1.00 49.45 ATOM 204 O2S L3U A 901 -3.093 -6.535 -27.136 1.00 46.32 ATOM 205 O3' L3U A 901 -6.905 -3.382 -31.322 1.00 48.09 ATOM 206 O4 L3U A 901 -11.558 -7.286 -25.518 1.00 72.73 ATOM 207 O4' L3U A 901 -7.150 -6.184 -29.689 1.00 42.35 ATOM 208 O5' L3U A 901 -5.010 -5.312 -28.082 1.00 45.71 ATOM 209 S L3U A 901 -3.766 -5.287 -27.085 1.00 40.29 TER