HEADER HYDROLASE 31-DEC-69 6T7H TITLE Crystal structure of Thrombin in complex with macrocycle N14-PR4-A COMPND MOL_ID: 1; COMPND 2 MOLECULE: Prothrombin; COMPND 3 CHAIN: B, L; COMPND 4 EC: 3.4.21.5; COMPND 5 Missing density; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.32 ANGSTORMS DBREF 6T7H B -4 15 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 B 30 GLU ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SEQRES 2 B 30 SER LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER SEQRES 3 B 30 TYR ILE ASP GLY ATOM 1 N GLU B 1C -3.844 13.005 8.222 1.00103.43 ATOM 2 CA GLU B 1C -5.279 13.199 7.815 1.00120.00 ATOM 3 C GLU B 1C -5.315 13.835 6.423 1.00107.77 ATOM 4 O GLU B 1C -5.016 13.164 5.437 1.00101.98 ATOM 5 CB GLU B 1C -6.048 13.978 8.896 1.00131.05 ATOM 6 CG GLU B 1C -6.475 13.149 10.112 1.00126.94 ATOM 7 CD GLU B 1C -5.422 12.755 11.150 1.00129.50 ATOM 8 OE1 GLU B 1C -4.329 13.369 11.166 1.00120.59 ATOM 9 OE2 GLU B 1C -5.696 11.830 11.958 1.00101.49 ATOM 10 N ALA B 1B -5.681 15.125 6.359 1.00 97.42 ATOM 11 CA ALA B 1B -5.666 15.909 5.131 1.00 89.19 ATOM 12 C ALA B 1B -4.298 16.573 4.975 1.00 79.81 ATOM 13 O ALA B 1B -3.981 17.138 3.927 1.00 68.19 ATOM 14 CB ALA B 1B -6.791 16.924 5.142 1.00 83.50 ATOM 15 N ASP B 1A -3.478 16.462 6.025 1.00 72.00 ATOM 16 CA ASP B 1A -2.156 17.062 6.028 1.00 67.09 ATOM 17 C ASP B 1A -1.060 16.021 5.741 1.00 64.96 ATOM 18 O ASP B 1A 0.139 16.312 5.824 1.00 59.39 ATOM 19 CB ASP B 1A -1.945 17.791 7.351 1.00 70.80 ATOM 20 CG ASP B 1A -0.799 18.773 7.256 1.00 80.80 ATOM 21 OD1 ASP B 1A -0.534 19.259 6.132 1.00 86.29 ATOM 22 OD2 ASP B 1A -0.170 19.025 8.292 1.00 88.64 ATOM 23 N CYS B 1 -1.457 14.802 5.356 1.00 55.84 ATOM 24 CA CYS B 1 -0.499 13.717 5.181 1.00 56.02 ATOM 25 C CYS B 1 0.548 14.031 4.114 1.00 52.76 ATOM 26 O CYS B 1 0.245 14.547 3.040 1.00 55.39 ATOM 27 CB CYS B 1 -1.182 12.409 4.808 1.00 52.13 ATOM 28 SG CYS B 1 -1.958 12.460 3.171 1.00 54.19 ATOM 29 N GLY B 2 1.794 13.661 4.415 1.00 50.63 ATOM 30 CA GLY B 2 2.805 13.491 3.385 1.00 47.05 ATOM 31 C GLY B 2 3.556 14.779 3.076 1.00 48.72 ATOM 32 O GLY B 2 4.367 14.821 2.155 1.00 48.22 ATOM 33 N LEU B 3 3.277 15.819 3.865 1.00 51.40 ATOM 34 CA LEU B 3 4.025 17.059 3.798 1.00 53.75 ATOM 35 C LEU B 3 4.878 17.184 5.055 1.00 50.93 ATOM 36 O LEU B 3 4.354 17.242 6.165 1.00 52.47 ATOM 37 CB LEU B 3 3.039 18.225 3.674 1.00 55.42 ATOM 38 CG LEU B 3 2.259 18.300 2.359 1.00 53.56 ATOM 39 CD1 LEU B 3 1.104 19.291 2.483 1.00 52.78 ATOM 40 CD2 LEU B 3 3.163 18.693 1.199 1.00 49.26 ATOM 41 N ARG B 4 6.200 17.194 4.865 1.00 48.48 ATOM 42 CA ARG B 4 7.106 17.033 5.989 1.00 49.08 ATOM 43 C ARG B 4 7.345 18.396 6.635 1.00 50.63 ATOM 44 O ARG B 4 7.790 19.314 5.944 1.00 44.24 ATOM 45 CB ARG B 4 8.448 16.456 5.512 1.00 44.34 ATOM 46 CG ARG B 4 8.336 15.077 4.870 1.00 46.21 ATOM 47 CD ARG B 4 9.648 14.599 4.303 1.00 36.22 ATOM 48 NE ARG B 4 9.948 15.370 3.106 1.00 42.89 ATOM 49 CZ ARG B 4 11.064 15.255 2.396 1.00 41.53 ATOM 50 NH1 ARG B 4 11.217 15.969 1.292 1.00 40.33 ATOM 51 NH2 ARG B 4 11.983 14.368 2.750 1.00 39.06 ATOM 52 N PRO B 5 7.114 18.570 7.963 1.00 46.33 ATOM 53 CA PRO B 5 7.434 19.832 8.637 1.00 50.64 ATOM 54 C PRO B 5 8.768 20.453 8.248 1.00 53.78 ATOM 55 O PRO B 5 8.826 21.657 8.040 1.00 55.67 ATOM 56 CB PRO B 5 7.364 19.457 10.116 1.00 48.14 ATOM 57 CG PRO B 5 6.206 18.460 10.128 1.00 46.97 ATOM 58 CD PRO B 5 6.436 17.631 8.870 1.00 48.13 ATOM 59 N LEU B 6 9.822 19.639 8.101 1.00 50.20 ATOM 60 CA LEU B 6 11.158 20.206 7.980 1.00 46.90 ATOM 61 C LEU B 6 11.612 20.287 6.516 1.00 50.91 ATOM 62 O LEU B 6 12.757 20.661 6.226 1.00 56.90 ATOM 63 CB LEU B 6 12.139 19.447 8.888 1.00 50.22 ATOM 64 CG LEU B 6 11.965 19.694 10.393 1.00 54.10 ATOM 65 CD1 LEU B 6 12.756 18.699 11.222 1.00 47.88 ATOM 66 CD2 LEU B 6 12.337 21.124 10.791 1.00 55.45 ATOM 67 N PHE B 7 10.707 19.974 5.578 1.00 50.97 ATOM 68 CA PHE B 7 11.032 20.037 4.156 1.00 48.81 ATOM 69 C PHE B 7 9.966 20.822 3.391 1.00 56.70 ATOM 70 O PHE B 7 10.137 22.013 3.121 1.00 55.92 ATOM 71 CB PHE B 7 11.390 18.647 3.614 1.00 48.84 ATOM 72 CG PHE B 7 12.723 18.176 4.151 1.00 48.77 ATOM 73 CD1 PHE B 7 13.911 18.553 3.532 1.00 46.55 ATOM 74 CD2 PHE B 7 12.801 17.448 5.329 1.00 44.62 ATOM 75 CE1 PHE B 7 15.146 18.205 4.058 1.00 44.08 ATOM 76 CE2 PHE B 7 14.035 17.112 5.864 1.00 49.72 ATOM 77 CZ PHE B 7 15.202 17.467 5.217 1.00 45.74 ATOM 78 N GLU B 8 8.856 20.155 3.056 1.00 54.96 ATOM 79 CA GLU B 8 7.874 20.764 2.174 1.00 56.47 ATOM 80 C GLU B 8 7.287 22.032 2.791 1.00 59.91 ATOM 81 O GLU B 8 7.091 23.012 2.084 1.00 63.57 ATOM 82 CB GLU B 8 6.759 19.782 1.837 1.00 50.96 ATOM 83 CG GLU B 8 7.161 18.793 0.763 1.00 50.82 ATOM 84 CD GLU B 8 7.962 17.598 1.259 1.00 45.79 ATOM 85 OE1 GLU B 8 7.908 17.297 2.479 1.00 44.33 ATOM 86 OE2 GLU B 8 8.642 16.983 0.424 1.00 41.16 ATOM 87 N LYS B 9 7.035 21.997 4.104 1.00 60.03 ATOM 88 CA LYS B 9 6.334 23.035 4.836 1.00 62.90 ATOM 89 C LYS B 9 7.207 24.274 5.017 1.00 64.49 ATOM 90 O LYS B 9 6.709 25.327 5.402 1.00 71.28 ATOM 91 CB LYS B 9 5.787 22.486 6.156 1.00 63.23 ATOM 92 CG LYS B 9 4.361 21.984 6.015 1.00 69.97 ATOM 93 CD LYS B 9 3.821 21.294 7.230 1.00 71.85 ATOM 94 CE LYS B 9 2.352 20.994 7.055 1.00 68.31 ATOM 95 NZ LYS B 9 1.858 20.253 8.229 1.00 78.52 ATOM 96 N LYS B 10 8.498 24.142 4.715 1.00 65.06 ATOM 97 CA LYS B 10 9.434 25.242 4.839 1.00 57.09 ATOM 98 C LYS B 10 10.029 25.497 3.470 1.00 55.13 ATOM 99 O LYS B 10 11.042 26.182 3.361 1.00 60.13 ATOM 100 CB LYS B 10 10.596 24.850 5.750 1.00 67.45 ATOM 101 CG LYS B 10 10.261 24.711 7.225 1.00 65.95 ATOM 102 CD LYS B 10 11.476 24.325 8.040 1.00 75.20 ATOM 103 CE LYS B 10 12.571 25.371 8.043 1.00 73.04 ATOM 104 NZ LYS B 10 13.437 25.231 9.237 1.00 84.59 ATOM 105 N SER B 11 9.399 24.916 2.441 1.00 54.89 ATOM 106 CA SER B 11 9.928 25.028 1.094 1.00 56.66 ATOM 107 C SER B 11 11.421 24.693 1.123 1.00 60.15 ATOM 108 O SER B 11 12.256 25.534 0.800 1.00 76.34 ATOM 109 CB SER B 11 9.670 26.424 0.524 1.00 52.65 ATOM 110 OG SER B 11 8.291 26.753 0.619 1.00 50.11 ATOM 111 N LEU B 12 11.747 23.478 1.580 1.00 60.60 ATOM 112 CA LEU B 12 13.097 22.936 1.518 1.00 60.40 ATOM 113 C LEU B 12 13.054 21.515 0.953 1.00 52.08 ATOM 114 O LEU B 12 12.182 20.728 1.315 1.00 55.99 ATOM 115 CB LEU B 12 13.708 22.953 2.926 1.00 64.36 ATOM 116 CG LEU B 12 14.186 24.307 3.458 1.00 66.23 ATOM 117 CD1 LEU B 12 14.576 24.189 4.927 1.00 58.43 ATOM 118 CD2 LEU B 12 15.357 24.848 2.639 1.00 62.04 ATOM 119 N GLU B 13 14.009 21.202 0.072 1.00 51.30 ATOM 120 CA GLU B 13 14.163 19.903 -0.575 1.00 52.13 ATOM 121 C GLU B 13 15.248 19.064 0.118 1.00 53.73 ATOM 122 O GLU B 13 16.316 19.574 0.480 1.00 50.33 ATOM 123 CB GLU B 13 14.634 20.132 -2.012 1.00 49.21 ATOM 124 CG GLU B 13 13.601 20.849 -2.868 1.00 63.95 ATOM 125 CD GLU B 13 13.796 20.779 -4.379 1.00 68.66 ATOM 126 OE1 GLU B 13 12.871 21.206 -5.094 1.00 68.74 ATOM 127 OE2 GLU B 13 14.859 20.277 -4.844 1.00 73.14 ATOM 128 N ASP B 14 15.018 17.750 0.238 1.00 43.87 ATOM 129 CA ASP B 14 16.077 16.891 0.756 1.00 44.95 ATOM 130 C ASP B 14 17.096 16.669 -0.353 1.00 47.19 ATOM 131 O ASP B 14 16.838 17.019 -1.506 1.00 44.66 ATOM 132 CB ASP B 14 15.560 15.581 1.371 1.00 41.85 ATOM 133 CG ASP B 14 14.905 14.590 0.399 1.00 41.30 ATOM 134 OD1 ASP B 14 15.576 14.142 -0.557 1.00 39.31 ATOM 135 OD2 ASP B 14 13.739 14.225 0.644 1.00 38.98 ATOM 136 N LYS B 14A 18.218 16.038 0.001 1.00 41.02 ATOM 137 CA LYS B 14A 19.353 15.881 -0.899 1.00 46.38 ATOM 138 C LYS B 14A 19.099 14.882 -2.032 1.00 46.22 ATOM 139 O LYS B 14A 19.935 14.777 -2.934 1.00 41.41 ATOM 140 CB LYS B 14A 20.594 15.429 -0.111 1.00 56.66 ATOM 141 CG LYS B 14A 21.127 16.429 0.916 1.00 63.05 ATOM 142 CD LYS B 14A 22.205 15.877 1.837 1.00 72.82 ATOM 143 CE LYS B 14A 22.832 16.911 2.756 1.00 73.14 ATOM 144 NZ LYS B 14A 24.135 16.436 3.282 1.00 76.45 ATOM 145 N THR B 14B 18.014 14.088 -1.999 1.00 40.07 ATOM 146 CA THR B 14B 17.954 13.104 -3.075 1.00 42.55 ATOM 147 C THR B 14B 16.597 13.064 -3.772 1.00 43.75 ATOM 148 O THR B 14B 16.466 12.339 -4.757 1.00 43.46 ATOM 149 CB THR B 14B 18.454 11.690 -2.725 1.00 39.84 ATOM 150 OG1 THR B 14B 17.579 11.126 -1.755 1.00 40.63 ATOM 151 CG2 THR B 14B 19.887 11.608 -2.244 1.00 39.91 ATOM 152 N GLU B 14C 15.615 13.836 -3.287 1.00 40.59 ATOM 153 CA GLU B 14C 14.281 13.835 -3.884 1.00 42.97 ATOM 154 C GLU B 14C 14.306 14.151 -5.383 1.00 42.02 ATOM 155 O GLU B 14C 13.512 13.600 -6.132 1.00 41.53 ATOM 156 CB GLU B 14C 13.278 14.684 -3.096 1.00 45.18 ATOM 157 CG GLU B 14C 13.602 16.168 -3.063 1.00 49.99 ATOM 158 CD GLU B 14C 12.489 16.910 -2.356 1.00 48.26 ATOM 159 OE1 GLU B 14C 12.626 17.163 -1.130 1.00 46.57 ATOM 160 OE2 GLU B 14C 11.461 17.177 -3.024 1.00 52.72 ATOM 161 N ARG B 14D 15.256 14.995 -5.804 0.46 45.22 ATOM 162 CA ARG B 14D 15.450 15.336 -7.206 0.46 44.96 ATOM 163 C ARG B 14D 15.643 14.077 -8.063 0.46 44.16 ATOM 164 O ARG B 14D 15.229 14.028 -9.222 0.46 45.46 ATOM 165 CB ARG B 14D 16.616 16.320 -7.341 0.46 44.61 ATOM 166 CG ARG B 14D 16.731 16.943 -8.722 0.46 49.64 ATOM 167 CD ARG B 14D 15.463 17.669 -9.146 0.46 50.13 ATOM 168 NE ARG B 14D 15.838 18.793 -9.998 0.46 56.18 ATOM 169 CZ ARG B 14D 15.499 20.062 -9.801 0.46 49.13 ATOM 170 NH1 ARG B 14D 14.722 20.402 -8.785 0.46 41.58 ATOM 171 NH2 ARG B 14D 15.926 20.983 -10.647 0.46 57.26 ATOM 172 N GLU B 14E 16.250 13.038 -7.485 1.00 45.00 ATOM 173 CA GLU B 14E 16.544 11.808 -8.221 1.00 44.68 ATOM 174 C GLU B 14E 15.239 11.115 -8.634 1.00 42.62 ATOM 175 O GLU B 14E 15.158 10.502 -9.696 1.00 42.41 ATOM 176 CB GLU B 14E 17.474 10.925 -7.382 1.00 39.14 ATOM 177 CG GLU B 14E 17.926 9.640 -8.064 1.00 47.77 ATOM 178 CD GLU B 14E 18.574 8.569 -7.180 1.00 52.36 ATOM 179 OE1 GLU B 14E 18.917 8.869 -5.991 1.00 46.62 ATOM 180 OE2 GLU B 14E 18.736 7.426 -7.683 1.00 45.57 ATOM 181 N LEU B 14F 14.216 11.234 -7.782 1.00 41.11 ATOM 182 CA LEU B 14F 12.926 10.605 -8.006 1.00 41.46 ATOM 183 C LEU B 14F 12.228 11.367 -9.135 1.00 41.89 ATOM 184 O LEU B 14F 11.706 10.752 -10.074 1.00 35.40 ATOM 185 CB LEU B 14F 12.063 10.662 -6.727 1.00 40.01 ATOM 186 CG LEU B 14F 12.647 10.092 -5.429 1.00 39.41 ATOM 187 CD1 LEU B 14F 11.672 10.277 -4.282 1.00 35.32 ATOM 188 CD2 LEU B 14F 13.006 8.616 -5.564 1.00 34.78 ATOM 189 N LEU B 14G 12.220 12.704 -9.013 1.00 39.38 ATOM 190 CA LEU B 14G 11.616 13.547 -10.030 1.00 39.85 ATOM 191 C LEU B 14G 12.284 13.287 -11.374 1.00 37.06 ATOM 192 O LEU B 14G 11.598 13.017 -12.354 1.00 41.16 ATOM 193 CB LEU B 14G 11.701 15.013 -9.621 1.00 44.06 ATOM 194 CG LEU B 14G 10.996 15.981 -10.576 1.00 49.52 ATOM 195 CD1 LEU B 14G 9.530 15.607 -10.789 1.00 46.24 ATOM 196 CD2 LEU B 14G 11.115 17.409 -10.079 1.00 43.27 ATOM 197 N GLU B 14H 13.613 13.243 -11.392 1.00 40.24 ATOM 198 CA GLU B 14H 14.322 12.909 -12.624 1.00 43.70 ATOM 199 C GLU B 14H 13.852 11.591 -13.227 1.00 42.49 ATOM 200 O GLU B 14H 13.717 11.507 -14.453 1.00 40.63 ATOM 201 CB GLU B 14H 15.828 12.856 -12.413 1.00 49.17 ATOM 202 CG GLU B 14H 16.388 14.234 -12.110 1.00 58.10 ATOM 203 CD GLU B 14H 17.884 14.292 -11.907 1.00 54.93 ATOM 204 OE1 GLU B 14H 18.499 13.209 -11.769 1.00 68.39 ATOM 205 OE2 GLU B 14H 18.418 15.417 -11.892 1.00 61.11 ATOM 206 N SER B 14I 13.611 10.580 -12.373 1.00 38.05 ATOM 207 CA SER B 14I 13.144 9.278 -12.842 1.00 38.65 ATOM 208 C SER B 14I 11.756 9.387 -13.483 1.00 38.49 ATOM 209 O SER B 14I 11.378 8.534 -14.272 1.00 40.77 ATOM 210 CB SER B 14I 13.139 8.218 -11.742 1.00 37.13 ATOM 211 OG SER B 14I 12.042 8.422 -10.841 1.00 33.35 ATOM 212 N TYR B 14J 10.956 10.385 -13.104 1.00 39.58 ATOM 213 CA TYR B 14J 9.612 10.427 -13.660 1.00 47.68 ATOM 214 C TYR B 14J 9.636 10.983 -15.089 1.00 44.26 ATOM 215 O TYR B 14J 8.761 10.653 -15.890 1.00 43.05 ATOM 216 CB TYR B 14J 8.673 11.267 -12.795 1.00 49.11 ATOM 217 CG TYR B 14J 8.497 10.797 -11.375 1.00 54.00 ATOM 218 CD1 TYR B 14J 8.687 9.467 -11.028 1.00 56.60 ATOM 219 CD2 TYR B 14J 8.115 11.685 -10.378 1.00 53.09 ATOM 220 CE1 TYR B 14J 8.543 9.036 -9.717 1.00 57.57 ATOM 221 CE2 TYR B 14J 7.939 11.265 -9.068 1.00 59.90 ATOM 222 CZ TYR B 14J 8.147 9.932 -8.739 1.00 61.82 ATOM 223 OH TYR B 14J 8.011 9.495 -7.451 1.00 79.94 ATOM 224 N ILE B 14K 10.628 11.840 -15.373 1.00 38.20 ATOM 225 CA ILE B 14K 10.692 12.633 -16.588 1.00 40.80 ATOM 226 C ILE B 14K 11.643 11.981 -17.598 1.00 43.10 ATOM 227 O ILE B 14K 11.301 11.864 -18.775 1.00 39.55 ATOM 228 CB ILE B 14K 11.128 14.087 -16.279 1.00 42.93 ATOM 229 CG1 ILE B 14K 10.336 14.764 -15.150 1.00 42.14 ATOM 230 CG2 ILE B 14K 11.168 14.921 -17.544 1.00 40.55 ATOM 231 CD1 ILE B 14K 8.839 14.681 -15.267 1.00 40.30 ATOM 232 N ASP B 14L 12.839 11.574 -17.142 1.00 45.55 ATOM 233 CA ASP B 14L 13.924 11.182 -18.034 1.00 51.57 ATOM 234 C ASP B 14L 13.698 9.772 -18.567 1.00 60.35 ATOM 235 O ASP B 14L 13.456 8.856 -17.784 1.00 59.52 ATOM 236 CB ASP B 14L 15.303 11.336 -17.379 1.00 49.48 ATOM 237 CG ASP B 14L 15.621 12.798 -17.085 1.00 59.83 ATOM 238 OD1 ASP B 14L 14.958 13.675 -17.687 1.00 52.62 ATOM 239 OD2 ASP B 14L 16.497 13.065 -16.231 1.00 62.75 ATOM 240 N GLY B 14M 13.786 9.643 -19.907 1.00 65.83 ATOM 241 CA GLY B 14M 13.848 8.371 -20.613 1.00 73.65 ATOM 242 C GLY B 14M 15.280 7.853 -20.696 1.00 76.16 ATOM 243 O GLY B 14M 15.438 6.615 -20.765 1.00 79.99 TER