HEADER DNA BINDING PROTEIN/DNA 31-DEC-69 6VOY TITLE Cryo-EM structure of HTLV-1 instasome COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-binding protein 7d; COMPND 3 CHAIN: A, B, C, D; COMPND 4 MUTATION: YES; COMPND 5 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 132 REMARK 465 LYS B 133 DBREF 6VOY B -74 -11 UNP P39476 DN7D_SACS2 1 64 DBREF 6VOY B 1 295 UNP A0A1Y1CA A0A1Y1CAW1_ 569 863 SEQRES 1 B 38 SER PRO ALA GLU LEU HIS SER PHE THR HIS CYS GLY GLN SEQRES 2 B 38 THR ALA LEU THR LEU GLN GLY ALA THR THR THR GLU ALA SEQRES 3 B 38 SER ASN ILE LEU ARG SER CYS HIS ALA CYS ARG LYS ATOM 1 N SER B 1 159.256 145.942 125.041 1.00226.30 ATOM 2 CA SER B 1 159.155 144.489 124.978 1.00226.30 ATOM 3 C SER B 1 160.497 143.738 125.007 1.00226.30 ATOM 4 O SER B 1 160.616 142.757 125.738 1.00226.30 ATOM 5 CB SER B 1 158.350 144.067 123.741 1.00226.30 ATOM 6 OG SER B 1 158.947 144.491 122.531 1.00226.30 ATOM 7 N PRO B 2 161.507 144.168 124.237 1.00226.37 ATOM 8 CA PRO B 2 162.746 143.378 124.223 1.00226.37 ATOM 9 C PRO B 2 163.430 143.259 125.571 1.00226.37 ATOM 10 O PRO B 2 163.955 142.185 125.871 1.00226.37 ATOM 11 CB PRO B 2 163.620 144.093 123.183 1.00226.37 ATOM 12 CG PRO B 2 162.684 144.920 122.398 1.00226.37 ATOM 13 CD PRO B 2 161.649 145.351 123.374 1.00226.37 ATOM 14 N ALA B 3 163.398 144.286 126.424 1.00232.83 ATOM 15 CA ALA B 3 163.964 144.095 127.758 1.00232.83 ATOM 16 C ALA B 3 163.101 143.183 128.617 1.00232.83 ATOM 17 O ALA B 3 163.632 142.340 129.363 1.00232.83 ATOM 18 CB ALA B 3 164.154 145.441 128.455 1.00232.83 ATOM 19 N GLU B 4 161.791 143.166 128.384 1.00224.68 ATOM 20 CA GLU B 4 161.045 142.254 129.228 1.00224.68 ATOM 21 C GLU B 4 161.093 140.873 128.618 1.00224.68 ATOM 22 O GLU B 4 161.200 139.882 129.349 1.00224.68 ATOM 23 CB GLU B 4 159.599 142.715 129.369 1.00224.68 ATOM 24 CG GLU B 4 158.895 142.068 130.540 1.00224.68 ATOM 25 CD GLU B 4 158.509 140.633 130.268 1.00224.68 ATOM 26 OE1 GLU B 4 158.061 140.339 129.142 1.00224.68 ATOM 27 OE2 GLU B 4 158.683 139.795 131.175 1.00224.68 ATOM 28 N LEU B 5 160.910 140.780 127.300 1.00226.65 ATOM 29 CA LEU B 5 160.995 139.474 126.672 1.00226.65 ATOM 30 C LEU B 5 162.344 138.861 127.004 1.00226.65 ATOM 31 O LEU B 5 162.447 137.659 127.243 1.00226.65 ATOM 32 CB LEU B 5 160.802 139.612 125.161 1.00226.65 ATOM 33 CG LEU B 5 160.766 138.392 124.235 1.00226.65 ATOM 34 CD1 LEU B 5 160.246 138.826 122.883 1.00226.65 ATOM 35 CD2 LEU B 5 162.122 137.726 124.050 1.00226.65 ATOM 36 N HIS B 6 163.352 139.719 127.165 1.00240.65 ATOM 37 CA HIS B 6 164.698 139.306 127.513 1.00240.65 ATOM 38 C HIS B 6 164.657 138.602 128.859 1.00240.65 ATOM 39 O HIS B 6 164.931 137.391 128.971 1.00240.65 ATOM 40 CB HIS B 6 165.424 140.654 127.667 1.00240.65 ATOM 41 CG HIS B 6 166.586 140.674 128.614 1.00240.65 ATOM 42 ND1 HIS B 6 167.027 141.838 129.187 1.00240.65 ATOM 43 CD2 HIS B 6 167.476 139.721 128.984 1.00240.65 ATOM 44 CE1 HIS B 6 168.080 141.593 129.946 1.00240.65 ATOM 45 NE2 HIS B 6 168.398 140.324 129.810 1.00240.65 ATOM 46 N SER B 7 164.241 139.343 129.890 1.00223.15 ATOM 47 CA SER B 7 164.343 138.792 131.235 1.00223.15 ATOM 48 C SER B 7 163.411 137.607 131.434 1.00223.15 ATOM 49 O SER B 7 163.718 136.697 132.211 1.00223.15 ATOM 50 CB SER B 7 164.076 139.865 132.284 1.00223.15 ATOM 51 OG SER B 7 164.140 139.308 133.582 1.00223.15 ATOM 52 N PHE B 8 162.277 137.604 130.737 1.00193.37 ATOM 53 CA PHE B 8 161.335 136.492 130.777 1.00193.37 ATOM 54 C PHE B 8 161.872 135.230 130.121 1.00193.37 ATOM 55 O PHE B 8 161.658 134.125 130.628 1.00193.37 ATOM 56 CB PHE B 8 160.055 136.930 130.066 1.00193.37 ATOM 57 CG PHE B 8 158.816 136.220 130.522 1.00193.37 ATOM 58 CD1 PHE B 8 158.102 136.674 131.612 1.00193.37 ATOM 59 CD2 PHE B 8 158.343 135.123 129.832 1.00193.37 ATOM 60 CE1 PHE B 8 156.954 136.029 132.019 1.00193.37 ATOM 61 CE2 PHE B 8 157.202 134.478 130.235 1.00193.37 ATOM 62 CZ PHE B 8 156.506 134.930 131.329 1.00193.37 ATOM 63 N THR B 9 162.582 135.367 129.009 1.00199.19 ATOM 64 CA THR B 9 162.996 134.208 128.239 1.00199.19 ATOM 65 C THR B 9 164.363 133.631 128.540 1.00199.19 ATOM 66 O THR B 9 164.628 132.521 128.077 1.00199.19 ATOM 67 CB THR B 9 162.808 134.422 126.738 1.00199.19 ATOM 68 OG1 THR B 9 163.859 135.255 126.230 1.00199.19 ATOM 69 CG2 THR B 9 161.435 135.000 126.441 1.00199.19 ATOM 70 N HIS B 10 165.256 134.283 129.281 1.00234.12 ATOM 71 CA HIS B 10 166.292 135.166 128.767 1.00234.12 ATOM 72 C HIS B 10 167.509 134.525 128.095 1.00234.12 ATOM 73 O HIS B 10 168.618 134.461 128.628 1.00234.12 ATOM 74 CB HIS B 10 166.757 136.145 129.821 1.00234.12 ATOM 75 CG HIS B 10 167.858 136.984 129.306 1.00234.12 ATOM 76 ND1 HIS B 10 168.455 136.731 128.093 1.00234.12 ATOM 77 CD2 HIS B 10 168.203 138.244 129.632 1.00234.12 ATOM 78 CE1 HIS B 10 169.279 137.717 127.807 1.00234.12 ATOM 79 NE2 HIS B 10 169.161 138.640 128.735 1.00234.12 ATOM 80 N CYS B 11 167.255 133.986 126.907 1.00231.25 ATOM 81 CA CYS B 11 168.334 133.645 125.990 1.00231.25 ATOM 82 C CYS B 11 168.739 134.947 125.285 1.00231.25 ATOM 83 O CYS B 11 168.275 136.030 125.648 1.00231.25 ATOM 84 CB CYS B 11 167.881 132.581 125.001 1.00231.25 ATOM 85 SG CYS B 11 166.950 133.265 123.613 1.00231.25 ATOM 86 N GLY B 12 169.588 134.883 124.258 1.00259.86 ATOM 87 CA GLY B 12 170.982 135.269 124.418 1.00259.86 ATOM 88 C GLY B 12 171.403 136.544 123.702 1.00259.86 ATOM 89 O GLY B 12 171.143 137.645 124.197 1.00259.86 ATOM 90 N GLN B 13 172.096 136.419 122.568 1.00276.36 ATOM 91 CA GLN B 13 172.660 137.557 121.838 1.00276.36 ATOM 92 C GLN B 13 172.223 137.617 120.379 1.00276.36 ATOM 93 O GLN B 13 172.045 138.713 119.840 1.00276.36 ATOM 94 CB GLN B 13 174.198 137.536 121.924 1.00276.36 ATOM 95 CG GLN B 13 174.886 136.300 121.347 1.00276.36 ATOM 96 CD GLN B 13 174.623 135.040 122.151 1.00276.36 ATOM 97 OE1 GLN B 13 174.422 135.098 123.362 1.00276.36 ATOM 98 NE2 GLN B 13 174.642 133.894 121.485 1.00276.36 ATOM 99 N THR B 14 172.055 136.468 119.726 1.00276.50 ATOM 100 CA THR B 14 171.929 136.409 118.273 1.00276.50 ATOM 101 C THR B 14 170.525 136.790 117.822 1.00276.50 ATOM 102 O THR B 14 170.335 137.751 117.071 1.00276.50 ATOM 103 CB THR B 14 172.270 135.010 117.763 1.00276.50 ATOM 104 OG1 THR B 14 171.124 134.162 117.910 1.00276.50 ATOM 105 CG2 THR B 14 173.434 134.427 118.538 1.00276.50 ATOM 106 N ALA B 15 169.532 136.049 118.299 1.00279.61 ATOM 107 CA ALA B 15 168.180 135.983 117.766 1.00279.61 ATOM 108 C ALA B 15 167.285 137.090 118.282 1.00279.61 ATOM 109 O ALA B 15 166.059 136.956 118.221 1.00279.61 ATOM 110 CB ALA B 15 167.557 134.620 118.072 1.00279.61 ATOM 111 N LEU B 16 167.869 138.157 118.822 1.00293.59 ATOM 112 CA LEU B 16 167.112 139.274 119.367 1.00293.59 ATOM 113 C LEU B 16 166.994 140.449 118.407 1.00293.59 ATOM 114 O LEU B 16 165.974 141.148 118.434 1.00293.59 ATOM 115 CB LEU B 16 167.787 139.787 120.641 1.00293.59 ATOM 116 CG LEU B 16 167.527 139.070 121.962 1.00293.59 ATOM 117 CD1 LEU B 16 166.061 139.188 122.316 1.00293.59 ATOM 118 CD2 LEU B 16 167.981 137.613 121.927 1.00293.59 ATOM 119 N THR B 17 167.965 140.656 117.512 1.00306.25 ATOM 120 CA THR B 17 167.836 141.772 116.582 1.00306.25 ATOM 121 C THR B 17 166.715 141.529 115.591 1.00306.25 ATOM 122 O THR B 17 166.146 142.494 115.065 1.00306.25 ATOM 123 CB THR B 17 169.153 142.003 115.828 1.00306.25 ATOM 124 OG1 THR B 17 169.108 143.265 115.149 1.00306.25 ATOM 125 CG2 THR B 17 169.396 140.901 114.805 1.00306.25 ATOM 126 N LEU B 18 166.277 140.283 115.461 1.00297.29 ATOM 127 CA LEU B 18 165.192 139.963 114.555 1.00297.29 ATOM 128 C LEU B 18 163.852 140.330 115.161 1.00297.29 ATOM 129 O LEU B 18 162.808 140.073 114.552 1.00297.29 ATOM 130 CB LEU B 18 165.252 138.493 114.135 1.00297.29 ATOM 131 CG LEU B 18 165.141 137.423 115.213 1.00297.29 ATOM 132 CD1 LEU B 18 163.711 136.948 115.346 1.00297.29 ATOM 133 CD2 LEU B 18 166.057 136.273 114.890 1.00297.29 ATOM 134 N GLN B 19 163.875 140.927 116.350 1.00298.24 ATOM 135 CA GLN B 19 162.690 141.477 116.975 1.00298.24 ATOM 136 C GLN B 19 162.690 142.995 116.933 1.00298.24 ATOM 137 O GLN B 19 161.650 143.605 117.202 1.00298.24 ATOM 138 CB GLN B 19 162.564 140.988 118.425 1.00298.24 ATOM 139 CG GLN B 19 162.299 139.496 118.552 1.00298.24 ATOM 140 CD GLN B 19 163.556 138.664 118.395 1.00298.24 ATOM 141 OE1 GLN B 19 164.487 139.064 117.708 1.00298.24 ATOM 142 NE2 GLN B 19 163.590 137.504 119.036 1.00298.24 ATOM 143 N GLY B 20 163.825 143.621 116.603 1.00307.40 ATOM 144 CA GLY B 20 163.843 145.063 116.441 1.00307.40 ATOM 145 C GLY B 20 165.037 145.811 116.993 1.00307.40 ATOM 146 O GLY B 20 165.162 147.017 116.762 1.00307.40 ATOM 147 N ALA B 21 165.921 145.134 117.715 1.00321.74 ATOM 148 CA ALA B 21 167.079 145.815 118.270 1.00321.74 ATOM 149 C ALA B 21 168.191 145.865 117.230 1.00321.74 ATOM 150 O ALA B 21 168.330 144.968 116.397 1.00321.74 ATOM 151 CB ALA B 21 167.569 145.118 119.538 1.00321.74 ATOM 152 N THR B 22 168.970 146.936 117.262 1.00339.17 ATOM 153 CA THR B 22 170.041 147.070 116.290 1.00339.17 ATOM 154 C THR B 22 171.247 146.257 116.741 1.00339.17 ATOM 155 O THR B 22 171.212 145.541 117.744 1.00339.17 ATOM 156 CB THR B 22 170.412 148.538 116.139 1.00339.17 ATOM 157 OG1 THR B 22 171.090 148.972 117.323 1.00339.17 ATOM 158 CG2 THR B 22 169.164 149.381 115.945 1.00339.17 ATOM 159 N THR B 23 172.359 146.433 116.030 1.00348.85 ATOM 160 CA THR B 23 173.599 145.733 116.348 1.00348.85 ATOM 161 C THR B 23 174.073 146.105 117.745 1.00348.85 ATOM 162 O THR B 23 174.233 145.253 118.638 1.00348.85 ATOM 163 CB THR B 23 174.654 146.105 115.309 1.00348.85 ATOM 164 OG1 THR B 23 175.009 147.482 115.473 1.00348.85 ATOM 165 CG2 THR B 23 174.109 145.904 113.911 1.00348.85 ATOM 166 N THR B 24 174.342 147.390 117.938 1.00349.30 ATOM 167 CA THR B 24 174.933 147.797 119.193 1.00349.30 ATOM 168 C THR B 24 173.924 147.622 120.309 1.00349.30 ATOM 169 O THR B 24 174.305 147.305 121.431 1.00349.30 ATOM 170 CB THR B 24 175.457 149.230 119.105 1.00349.30 ATOM 171 OG1 THR B 24 176.534 149.282 118.160 1.00349.30 ATOM 172 CG2 THR B 24 175.975 149.699 120.454 1.00349.30 ATOM 173 N GLU B 25 172.650 147.926 120.055 1.00345.93 ATOM 174 CA GLU B 25 171.655 147.703 121.098 1.00345.93 ATOM 175 C GLU B 25 171.506 146.226 121.465 1.00345.93 ATOM 176 O GLU B 25 171.188 145.920 122.610 1.00345.93 ATOM 177 CB GLU B 25 170.312 148.323 120.705 1.00345.93 ATOM 178 CG GLU B 25 170.394 149.814 120.402 1.00345.93 ATOM 179 CD GLU B 25 170.599 150.671 121.640 1.00345.93 ATOM 180 OE1 GLU B 25 170.646 150.120 122.758 1.00345.93 ATOM 181 OE2 GLU B 25 170.719 151.904 121.491 1.00345.93 ATOM 182 N ALA B 26 171.858 145.301 120.570 1.00343.40 ATOM 183 CA ALA B 26 171.920 143.887 120.945 1.00343.40 ATOM 184 C ALA B 26 173.099 143.606 121.865 1.00343.40 ATOM 185 O ALA B 26 172.974 142.922 122.896 1.00343.40 ATOM 186 CB ALA B 26 171.996 143.011 119.698 1.00343.40 ATOM 187 N SER B 27 174.256 144.156 121.529 1.00342.72 ATOM 188 CA SER B 27 175.356 144.013 122.476 1.00342.72 ATOM 189 C SER B 27 175.057 144.738 123.790 1.00342.72 ATOM 190 O SER B 27 175.444 144.267 124.864 1.00342.72 ATOM 191 CB SER B 27 176.665 144.502 121.858 1.00342.72 ATOM 192 OG SER B 27 177.618 144.821 122.857 1.00342.72 ATOM 193 N ASN B 28 174.372 145.884 123.733 1.00337.82 ATOM 194 CA ASN B 28 173.913 146.581 124.932 1.00337.82 ATOM 195 C ASN B 28 172.776 145.864 125.648 1.00337.82 ATOM 196 O ASN B 28 172.430 146.247 126.769 1.00337.82 ATOM 197 CB ASN B 28 173.495 148.003 124.565 1.00337.82 ATOM 198 CG ASN B 28 174.680 148.941 124.456 1.00337.82 ATOM 199 OD1 ASN B 28 175.777 148.529 124.082 1.00337.82 ATOM 200 ND2 ASN B 28 174.466 150.208 124.785 1.00337.82 ATOM 201 N ILE B 29 172.186 144.851 125.021 1.00324.86 ATOM 202 CA ILE B 29 171.341 143.911 125.745 1.00324.86 ATOM 203 C ILE B 29 172.215 142.944 126.515 1.00324.86 ATOM 204 O ILE B 29 171.892 142.550 127.640 1.00324.86 ATOM 205 CB ILE B 29 170.366 143.186 124.800 1.00324.86 ATOM 206 CG1 ILE B 29 169.377 144.167 124.158 1.00324.86 ATOM 207 CG2 ILE B 29 169.650 142.063 125.526 1.00324.86 ATOM 208 CD1 ILE B 29 168.889 145.257 125.073 1.00324.86 ATOM 209 N LEU B 30 173.341 142.558 125.918 1.00325.00 ATOM 210 CA LEU B 30 174.282 141.731 126.674 1.00325.00 ATOM 211 C LEU B 30 174.841 142.512 127.853 1.00325.00 ATOM 212 O LEU B 30 175.086 141.951 128.926 1.00325.00 ATOM 213 CB LEU B 30 175.434 141.232 125.800 1.00325.00 ATOM 214 CG LEU B 30 176.141 139.950 126.275 1.00325.00 ATOM 215 CD1 LEU B 30 175.169 138.908 126.789 1.00325.00 ATOM 216 CD2 LEU B 30 177.035 139.357 125.196 1.00325.00 ATOM 217 N ARG B 31 175.042 143.810 127.665 1.00322.22 ATOM 218 CA ARG B 31 175.362 144.715 128.754 1.00322.22 ATOM 219 C ARG B 31 174.203 144.885 129.725 1.00322.22 ATOM 220 O ARG B 31 174.407 145.415 130.822 1.00322.22 ATOM 221 CB ARG B 31 175.764 146.076 128.188 1.00322.22 ATOM 222 CG ARG B 31 176.612 146.918 129.117 1.00322.22 ATOM 223 CD ARG B 31 176.861 148.299 128.535 1.00322.22 ATOM 224 NE ARG B 31 175.755 149.222 128.779 1.00322.22 ATOM 225 CZ ARG B 31 175.560 149.872 129.921 1.00322.22 ATOM 226 NH1 ARG B 31 176.392 149.699 130.937 1.00322.22 ATOM 227 NH2 ARG B 31 174.529 150.693 130.049 1.00322.22 ATOM 228 N SER B 32 173.005 144.440 129.360 1.00315.46 ATOM 229 CA SER B 32 171.835 144.579 130.211 1.00315.46 ATOM 230 C SER B 32 171.598 143.331 131.047 1.00315.46 ATOM 231 O SER B 32 171.927 142.212 130.648 1.00315.46 ATOM 232 CB SER B 32 170.587 144.864 129.377 1.00315.46 ATOM 233 OG SER B 32 170.160 143.689 128.714 1.00315.46 ATOM 234 N CYS B 33 171.037 143.563 132.232 1.00299.42 ATOM 235 CA CYS B 33 170.685 142.628 133.296 1.00299.42 ATOM 236 C CYS B 33 171.918 142.069 133.989 1.00299.42 ATOM 237 O CYS B 33 171.775 141.285 134.935 1.00299.42 ATOM 238 CB CYS B 33 169.777 141.486 132.798 1.00299.42 ATOM 239 SG CYS B 33 170.540 139.974 132.102 1.00299.42 ATOM 240 N HIS B 34 173.125 142.442 133.541 1.00294.09 ATOM 241 CA HIS B 34 174.397 142.234 134.248 1.00294.09 ATOM 242 C HIS B 34 174.558 140.792 134.716 1.00294.09 ATOM 243 O HIS B 34 175.263 140.505 135.686 1.00294.09 ATOM 244 CB HIS B 34 174.546 143.228 135.401 1.00294.09 ATOM 245 CG HIS B 34 174.454 144.662 134.968 1.00294.09 ATOM 246 ND1 HIS B 34 174.828 145.711 135.779 1.00294.09 ATOM 247 CD2 HIS B 34 174.047 145.217 133.801 1.00294.09 ATOM 248 CE1 HIS B 34 174.647 146.850 135.134 1.00294.09 ATOM 249 NE2 HIS B 34 174.175 146.578 133.932 1.00294.09 ATOM 250 N ALA B 35 173.897 139.883 134.010 1.00269.57 ATOM 251 CA ALA B 35 173.860 138.470 134.343 1.00269.57 ATOM 252 C ALA B 35 174.109 137.589 133.138 1.00269.57 ATOM 253 O ALA B 35 174.301 136.379 133.304 1.00269.57 ATOM 254 CB ALA B 35 172.506 138.094 134.965 1.00269.57 ATOM 255 N CYS B 36 174.105 138.155 131.940 1.00269.90 ATOM 256 CA CYS B 36 174.214 137.397 130.720 1.00269.90 ATOM 257 C CYS B 36 175.553 137.583 130.015 1.00269.90 ATOM 258 O CYS B 36 176.516 138.070 130.609 1.00269.90 ATOM 259 CB CYS B 36 173.074 137.839 129.828 1.00269.90 ATOM 260 SG CYS B 36 171.493 137.462 130.613 1.00269.90 ATOM 261 ZN ZN B 301 169.872 139.183 130.135 1.00278.64 TER