HEADER PROTON TRANSPORT 31-DEC-69 6VQI TITLE Mammalian V-ATPase from rat brain collar and peripheral stalks TITLE 2 rotational state 1 (from focused refinement) COMPND MOL_ID: 4; COMPND 2 MOLECULE: V-type proton ATPase 116 kDa subunit a isoform 1; COMPND 3 CHAIN: a; EXPDTA ELECTRON MICROSCOPY DBREF 6VQI a 1 838 UNP P25286 VPP1_RAT 1 838 SEQRES 1 a 30 LEU ALA GLN LEU PHE LEU GLN SER GLU ALA ALA TYR CYS SEQRES 2 a 30 CYS VAL SER GLU LEU GLU GLU LEU GLY LYS VAL GLN PHE SEQRES 3 a 30 ARG ASP LEU ASN SEQRES 1 a 25 CYS ASN ILE ASP VAL THR GLN LYS CYS LEU ILE ALA GLU SEQRES 2 a 25 VAL TRP CYS PRO VAL THR ASP LEU ASP SER ILE GLN ATOM 1 N LEU a 12 158.228 134.510 240.870 1.00126.27 ATOM 2 CA LEU a 12 158.397 134.890 239.474 1.00126.27 ATOM 3 C LEU a 12 157.895 133.782 238.550 1.00126.27 ATOM 4 O LEU a 12 158.304 132.629 238.656 1.00126.27 ATOM 5 CB LEU a 12 159.860 135.216 239.182 1.00126.27 ATOM 6 N ALA a 13 157.003 134.166 237.643 1.00137.79 ATOM 7 CA ALA a 13 156.327 133.282 236.702 1.00137.79 ATOM 8 C ALA a 13 156.353 133.913 235.320 1.00137.79 ATOM 9 O ALA a 13 156.518 135.122 235.191 1.00137.79 ATOM 10 CB ALA a 13 154.891 132.999 237.126 1.00137.79 ATOM 11 N GLN a 14 156.279 133.102 234.272 1.00134.42 ATOM 12 CA GLN a 14 156.390 133.636 232.923 1.00134.42 ATOM 13 C GLN a 14 155.111 133.316 232.163 1.00134.42 ATOM 14 O GLN a 14 154.551 132.229 232.299 1.00134.42 ATOM 15 CB GLN a 14 157.604 133.065 232.192 1.00134.42 ATOM 16 N LEU a 15 154.651 134.275 231.367 1.00133.64 ATOM 17 CA LEU a 15 153.425 134.160 230.593 1.00133.64 ATOM 18 C LEU a 15 153.721 134.420 229.124 1.00133.64 ATOM 19 O LEU a 15 154.377 135.408 228.779 1.00133.64 ATOM 20 CB LEU a 15 152.366 135.135 231.106 1.00133.64 ATOM 21 N PHE a 16 153.238 133.519 228.274 1.00132.48 ATOM 22 CA PHE a 16 153.269 133.631 226.821 1.00132.48 ATOM 23 C PHE a 16 151.871 133.715 226.230 1.00132.48 ATOM 24 O PHE a 16 151.005 132.902 226.572 1.00132.48 ATOM 25 CB PHE a 16 154.003 132.442 226.205 1.00132.48 ATOM 26 N LEU a 17 151.640 134.707 225.368 1.00152.50 ATOM 27 CA LEU a 17 150.341 134.777 224.702 1.00152.50 ATOM 28 C LEU a 17 150.464 135.618 223.439 1.00152.50 ATOM 29 O LEU a 17 151.449 136.323 223.244 1.00152.50 ATOM 30 CB LEU a 17 149.281 135.369 225.627 1.00152.50 ATOM 31 N GLN a 18 149.416 135.598 222.613 1.00182.32 ATOM 32 CA GLN a 18 149.513 136.264 221.321 1.00182.32 ATOM 33 C GLN a 18 149.505 137.770 221.529 1.00182.32 ATOM 34 O GLN a 18 148.937 138.273 222.500 1.00182.32 ATOM 35 CB GLN a 18 148.361 135.852 220.410 1.00182.32 ATOM 36 N SER a 19 150.129 138.499 220.601 1.00203.42 ATOM 37 CA SER a 19 150.235 139.931 220.842 1.00203.42 ATOM 38 C SER a 19 148.883 140.635 220.812 1.00203.42 ATOM 39 O SER a 19 148.672 141.589 221.583 1.00203.42 ATOM 40 CB SER a 19 151.174 140.556 219.813 1.00203.42 ATOM 41 N GLU a 20 147.924 140.134 220.031 1.00201.50 ATOM 42 CA GLU a 20 146.632 140.805 220.039 1.00201.50 ATOM 43 C GLU a 20 146.001 140.600 221.399 1.00201.50 ATOM 44 O GLU a 20 145.476 141.533 222.015 1.00201.50 ATOM 45 CB GLU a 20 145.739 140.263 218.929 1.00201.50 ATOM 46 N ALA a 21 146.056 139.361 221.873 1.00212.44 ATOM 47 CA ALA a 21 145.565 139.028 223.197 1.00212.44 ATOM 48 C ALA a 21 146.339 139.791 224.263 1.00212.44 ATOM 49 O ALA a 21 145.777 140.186 225.284 1.00212.44 ATOM 50 CB ALA a 21 145.663 137.521 223.424 1.00212.44 ATOM 51 N ALA a 22 147.647 139.964 224.041 1.00205.44 ATOM 52 CA ALA a 22 148.507 140.682 224.976 1.00205.44 ATOM 53 C ALA a 22 148.059 142.111 225.224 1.00205.44 ATOM 54 O ALA a 22 148.058 142.562 226.372 1.00205.44 ATOM 55 CB ALA a 22 149.945 140.676 224.465 1.00205.44 ATOM 56 N TYR a 23 147.666 142.842 224.183 1.00201.32 ATOM 57 CA TYR a 23 147.228 144.213 224.447 1.00201.32 ATOM 58 C TYR a 23 146.044 144.213 225.406 1.00201.32 ATOM 59 O TYR a 23 146.062 144.886 226.452 1.00201.32 ATOM 60 CB TYR a 23 146.868 144.919 223.145 1.00201.32 ATOM 61 N CYS a 24 145.050 143.377 225.118 1.00206.58 ATOM 62 CA CYS a 24 143.850 143.350 225.943 1.00206.58 ATOM 63 C CYS a 24 144.203 142.872 227.337 1.00206.58 ATOM 64 O CYS a 24 143.710 143.410 228.336 1.00206.58 ATOM 65 CB CYS a 24 142.792 142.448 225.315 1.00206.58 ATOM 66 N CYS a 25 145.029 141.833 227.415 1.00196.53 ATOM 67 CA CYS a 25 145.307 141.221 228.695 1.00196.53 ATOM 68 C CYS a 25 146.007 142.229 229.579 1.00196.53 ATOM 69 O CYS a 25 145.694 142.348 230.765 1.00196.53 ATOM 70 CB CYS a 25 146.158 139.966 228.502 1.00196.53 ATOM 71 N VAL a 26 146.988 142.939 229.021 1.00184.23 ATOM 72 CA VAL a 26 147.728 143.899 229.819 1.00184.23 ATOM 73 C VAL a 26 146.756 144.930 230.343 1.00184.23 ATOM 74 O VAL a 26 146.819 145.335 231.506 1.00184.23 ATOM 75 CB VAL a 26 148.854 144.544 228.994 1.00184.23 ATOM 76 N SER a 27 145.847 145.378 229.479 1.00180.04 ATOM 77 CA SER a 27 144.854 146.353 229.908 1.00180.04 ATOM 78 C SER a 27 144.039 145.827 231.084 1.00180.04 ATOM 79 O SER a 27 143.876 146.506 232.111 1.00180.04 ATOM 80 CB SER a 27 143.942 146.708 228.737 1.00180.04 ATOM 81 N GLU a 28 143.580 144.584 230.984 1.00165.81 ATOM 82 CA GLU a 28 142.772 144.050 232.070 1.00165.81 ATOM 83 C GLU a 28 143.591 143.916 233.339 1.00165.81 ATOM 84 O GLU a 28 143.098 144.213 234.433 1.00165.81 ATOM 85 CB GLU a 28 142.179 142.707 231.667 1.00165.81 ATOM 86 N LEU a 29 144.847 143.492 233.219 1.00180.19 ATOM 87 CA LEU a 29 145.649 143.293 234.419 1.00180.19 ATOM 88 C LEU a 29 145.936 144.626 235.084 1.00180.19 ATOM 89 O LEU a 29 145.963 144.716 236.314 1.00180.19 ATOM 90 CB LEU a 29 146.951 142.573 234.076 1.00180.19 ATOM 91 N GLU a 30 146.089 145.677 234.280 1.00174.82 ATOM 92 CA GLU a 30 146.336 147.005 234.822 1.00174.82 ATOM 93 C GLU a 30 145.121 147.450 235.600 1.00174.82 ATOM 94 O GLU a 30 145.236 148.141 236.617 1.00174.82 ATOM 95 CB GLU a 30 146.654 148.001 233.710 1.00174.82 ATOM 96 N GLU a 31 143.946 147.065 235.121 1.00174.27 ATOM 97 CA GLU a 31 142.753 147.417 235.868 1.00174.27 ATOM 98 C GLU a 31 142.680 146.599 237.147 1.00174.27 ATOM 99 O GLU a 31 142.242 147.100 238.187 1.00174.27 ATOM 100 CB GLU a 31 141.512 147.190 235.012 1.00174.27 ATOM 101 N LEU a 32 143.098 145.336 237.095 1.00190.81 ATOM 102 CA LEU a 32 143.098 144.531 238.310 1.00190.81 ATOM 103 C LEU a 32 144.109 145.067 239.320 1.00190.81 ATOM 104 O LEU a 32 143.796 145.218 240.507 1.00190.81 ATOM 105 CB LEU a 32 143.397 143.074 237.969 1.00190.81 ATOM 106 N GLY a 33 145.326 145.358 238.867 1.00176.77 ATOM 107 CA GLY a 33 146.357 145.970 239.693 1.00176.77 ATOM 108 C GLY a 33 147.064 145.089 240.704 1.00176.77 ATOM 109 O GLY a 33 147.594 145.611 241.688 1.00176.77 ATOM 110 N LYS a 34 147.098 143.773 240.503 1.00139.75 ATOM 111 CA LYS a 34 147.702 142.856 241.460 1.00139.75 ATOM 112 C LYS a 34 148.963 142.181 240.939 1.00139.75 ATOM 113 O LYS a 34 149.471 141.267 241.591 1.00139.75 ATOM 114 CB LYS a 34 146.686 141.797 241.883 1.00139.75 ATOM 115 N VAL a 35 149.470 142.586 239.786 1.00141.90 ATOM 116 CA VAL a 35 150.582 141.908 239.129 1.00141.90 ATOM 117 C VAL a 35 151.646 142.923 238.758 1.00141.90 ATOM 118 O VAL a 35 151.323 144.033 238.327 1.00141.90 ATOM 119 CB VAL a 35 150.112 141.147 237.877 1.00141.90 ATOM 120 N GLN a 36 152.913 142.570 238.953 1.00136.50 ATOM 121 CA GLN a 36 153.993 143.458 238.551 1.00136.50 ATOM 122 C GLN a 36 154.894 142.771 237.533 1.00136.50 ATOM 123 O GLN a 36 155.537 141.767 237.840 1.00136.50 ATOM 124 CB GLN a 36 154.797 143.920 239.765 1.00136.50 ATOM 125 N PHE a 37 154.954 143.334 236.338 1.00110.64 ATOM 126 CA PHE a 37 155.721 142.800 235.224 1.00110.64 ATOM 127 C PHE a 37 157.184 143.207 235.340 1.00110.64 ATOM 128 O PHE a 37 157.509 144.273 235.861 1.00110.64 ATOM 129 CB PHE a 37 155.150 143.282 233.893 1.00110.64 ATOM 130 N ARG a 38 158.073 142.337 234.871 1.00 93.70 ATOM 131 CA ARG a 38 159.500 142.615 234.914 1.00 93.70 ATOM 132 C ARG a 38 159.956 142.929 233.498 1.00 93.70 ATOM 133 O ARG a 38 159.383 142.438 232.524 1.00 93.70 ATOM 134 CB ARG a 38 160.290 141.425 235.463 1.00 93.70 ATOM 135 N ASP a 39 161.001 143.742 233.388 1.00107.91 ATOM 136 CA ASP a 39 161.602 144.044 232.094 1.00107.91 ATOM 137 C ASP a 39 162.553 142.955 231.619 1.00107.91 ATOM 138 O ASP a 39 163.565 142.670 232.268 1.00107.91 ATOM 139 CB ASP a 39 162.334 145.380 232.156 1.00107.91 ATOM 140 N LEU a 40 162.218 142.359 230.484 1.00107.02 ATOM 141 CA LEU a 40 162.923 141.220 229.925 1.00107.02 ATOM 142 C LEU a 40 164.017 141.661 228.971 1.00107.02 ATOM 143 O LEU a 40 164.772 140.822 228.473 1.00107.02 ATOM 144 CB LEU a 40 161.948 140.293 229.202 1.00107.02 ATOM 145 N ASN a 41 164.118 142.959 228.722 1.00 90.86 ATOM 146 CA ASN a 41 165.083 143.527 227.784 1.00 90.86 ATOM 147 C ASN a 41 165.678 144.762 228.427 1.00 90.86 ATOM 148 O ASN a 41 165.398 145.895 228.022 1.00 90.86 ATOM 149 CB ASN a 41 164.416 143.860 226.449 1.00 90.86 TER ATOM 1 N CYS a 310 159.411 144.392 228.223 1.00107.38 ATOM 2 CA CYS a 310 159.162 142.995 227.905 1.00107.38 ATOM 3 C CYS a 310 160.122 142.569 226.807 1.00107.38 ATOM 4 O CYS a 310 160.910 143.373 226.299 1.00107.38 ATOM 5 CB CYS a 310 157.709 142.785 227.469 1.00107.38 ATOM 6 N ASN a 311 160.067 141.290 226.446 1.00 93.22 ATOM 7 CA ASN a 311 160.850 140.788 225.327 1.00 93.22 ATOM 8 C ASN a 311 159.891 140.268 224.272 1.00 93.22 ATOM 9 O ASN a 311 159.180 139.281 224.490 1.00 93.22 ATOM 10 CB ASN a 311 161.807 139.685 225.773 1.00 93.22 ATOM 11 N ILE a 312 159.893 140.949 223.134 1.00121.55 ATOM 12 CA ILE a 312 159.039 140.618 222.005 1.00121.55 ATOM 13 C ILE a 312 159.704 139.515 221.203 1.00121.55 ATOM 14 O ILE a 312 160.874 139.637 220.824 1.00121.55 ATOM 15 CB ILE a 312 158.783 141.855 221.132 1.00121.55 ATOM 16 N ASP a 313 158.978 138.433 220.950 1.00131.71 ATOM 17 CA ASP a 313 159.644 137.357 220.248 1.00131.71 ATOM 18 C ASP a 313 159.816 137.783 218.798 1.00131.71 ATOM 19 O ASP a 313 159.136 138.687 218.306 1.00131.71 ATOM 20 CB ASP a 313 158.841 136.062 220.338 1.00131.71 ATOM 21 N VAL a 314 160.738 137.130 218.108 1.00162.08 ATOM 22 CA VAL a 314 161.064 137.571 216.759 1.00162.08 ATOM 23 C VAL a 314 160.265 136.813 215.714 1.00162.08 ATOM 24 O VAL a 314 159.824 137.393 214.720 1.00162.08 ATOM 25 CB VAL a 314 162.578 137.436 216.516 1.00162.08 ATOM 26 N THR a 315 160.054 135.524 215.928 1.00196.55 ATOM 27 CA THR a 315 159.473 134.677 214.901 1.00196.55 ATOM 28 C THR a 315 157.952 134.622 214.915 1.00196.55 ATOM 29 O THR a 315 157.364 134.157 213.934 1.00196.55 ATOM 30 CB THR a 315 160.032 133.263 215.032 1.00196.55 ATOM 31 N GLN a 316 157.294 135.070 215.976 1.00168.50 ATOM 32 CA GLN a 316 155.843 134.983 216.025 1.00168.50 ATOM 33 C GLN a 316 155.294 136.246 216.653 1.00168.50 ATOM 34 O GLN a 316 155.969 136.896 217.454 1.00168.50 ATOM 35 CB GLN a 316 155.372 133.760 216.821 1.00168.50 ATOM 36 N LYS a 317 154.055 136.588 216.306 1.00153.92 ATOM 37 CA LYS a 317 153.468 137.791 216.880 1.00153.92 ATOM 38 C LYS a 317 152.854 137.446 218.235 1.00153.92 ATOM 39 O LYS a 317 151.653 137.556 218.481 1.00153.92 ATOM 40 CB LYS a 317 152.438 138.384 215.928 1.00153.92 ATOM 41 N CYS a 318 153.737 137.015 219.122 1.00135.77 ATOM 42 CA CYS a 318 153.357 136.580 220.445 1.00135.77 ATOM 43 C CYS a 318 154.375 137.162 221.405 1.00135.77 ATOM 44 O CYS a 318 155.530 137.391 221.039 1.00135.77 ATOM 45 CB CYS a 318 153.308 135.052 220.552 1.00135.77 ATOM 46 N LEU a 319 153.947 137.407 222.629 1.00126.14 ATOM 47 CA LEU a 319 154.770 138.091 223.604 1.00126.14 ATOM 48 C LEU a 319 154.977 137.187 224.804 1.00126.14 ATOM 49 O LEU a 319 154.023 136.555 225.285 1.00126.14 ATOM 50 CB LEU a 319 154.129 139.407 224.033 1.00126.14 ATOM 51 N ILE a 320 156.225 137.083 225.244 1.00121.80 ATOM 52 CA ILE a 320 156.555 136.358 226.455 1.00121.80 ATOM 53 C ILE a 320 157.021 137.409 227.444 1.00121.80 ATOM 54 O ILE a 320 157.752 138.334 227.073 1.00121.80 ATOM 55 CB ILE a 320 157.639 135.292 226.220 1.00121.80 ATOM 56 N ALA a 321 156.598 137.278 228.695 1.00137.61 ATOM 57 CA ALA a 321 157.063 138.176 229.739 1.00137.61 ATOM 58 C ALA a 321 157.153 137.443 231.064 1.00137.61 ATOM 59 O ALA a 321 156.356 136.545 231.330 1.00137.61 ATOM 60 CB ALA a 321 156.143 139.391 229.875 1.00137.61 ATOM 61 N GLU a 322 158.105 137.819 231.910 1.00134.69 ATOM 62 CA GLU a 322 158.035 137.297 233.263 1.00134.69 ATOM 63 C GLU a 322 157.443 138.374 234.163 1.00134.69 ATOM 64 O GLU a 322 157.756 139.560 234.030 1.00134.69 ATOM 65 CB GLU a 322 159.416 136.885 233.770 1.00134.69 ATOM 66 N VAL a 323 156.620 137.939 235.102 1.00140.60 ATOM 67 CA VAL a 323 155.910 138.797 236.035 1.00140.60 ATOM 68 C VAL a 323 156.038 138.208 237.427 1.00140.60 ATOM 69 O VAL a 323 156.162 136.991 237.602 1.00140.60 ATOM 70 CB VAL a 323 154.426 138.985 235.662 1.00140.60 ATOM 71 N TRP a 324 156.025 139.075 238.413 1.00124.92 ATOM 72 CA TRP a 324 155.847 138.667 239.787 1.00124.92 ATOM 73 C TRP a 324 154.362 138.816 240.063 1.00124.92 ATOM 74 O TRP a 324 153.714 139.741 239.556 1.00124.92 ATOM 75 CB TRP a 324 156.682 139.514 240.742 1.00124.92 ATOM 76 N CYS a 325 153.818 137.899 240.852 1.00111.54 ATOM 77 CA CYS a 325 152.433 138.020 241.268 1.00111.54 ATOM 78 C CYS a 325 152.255 137.272 242.570 1.00111.54 ATOM 79 O CYS a 325 153.012 136.343 242.863 1.00111.54 ATOM 80 CB CYS a 325 151.489 137.464 240.200 1.00111.54 ATOM 81 N PRO a 326 151.261 137.648 243.366 1.00137.43 ATOM 82 CA PRO a 326 150.935 136.851 244.547 1.00137.43 ATOM 83 C PRO a 326 150.518 135.444 244.173 1.00137.43 ATOM 84 O PRO a 326 149.823 135.224 243.182 1.00137.43 ATOM 85 CB PRO a 326 149.771 137.620 245.177 1.00137.43 ATOM 86 N VAL a 327 150.917 134.489 245.012 1.00162.22 ATOM 87 CA VAL a 327 150.588 133.101 244.731 1.00162.22 ATOM 88 C VAL a 327 149.096 132.919 244.879 1.00162.22 ATOM 89 O VAL a 327 148.439 132.292 244.045 1.00162.22 ATOM 90 CB VAL a 327 151.373 132.164 245.660 1.00162.22 ATOM 91 N THR a 328 148.532 133.517 245.916 1.00143.18 ATOM 92 CA THR a 328 147.178 133.205 246.310 1.00143.18 ATOM 93 C THR a 328 146.233 133.797 245.293 1.00143.18 ATOM 94 O THR a 328 145.095 133.342 245.160 1.00143.18 ATOM 95 CB THR a 328 146.875 133.746 247.701 1.00143.18 ATOM 96 N ASP a 329 146.719 134.794 244.564 1.00149.47 ATOM 97 CA ASP a 329 145.971 135.581 243.602 1.00149.47 ATOM 98 C ASP a 329 146.184 135.090 242.183 1.00149.47 ATOM 99 O ASP a 329 145.673 135.699 241.237 1.00149.47 ATOM 100 CB ASP a 329 146.371 137.052 243.710 1.00149.47 ATOM 101 N LEU a 330 146.901 133.982 242.017 1.00172.80 ATOM 102 CA LEU a 330 147.168 133.495 240.674 1.00172.80 ATOM 103 C LEU a 330 145.870 133.115 239.989 1.00172.80 ATOM 104 O LEU a 330 145.699 133.380 238.795 1.00172.80 ATOM 105 CB LEU a 330 148.123 132.305 240.719 1.00172.80 ATOM 106 N ASP a 331 144.926 132.525 240.727 1.00168.14 ATOM 107 CA ASP a 331 143.704 132.117 240.054 1.00168.14 ATOM 108 C ASP a 331 142.994 133.359 239.563 1.00168.14 ATOM 109 O ASP a 331 142.389 133.363 238.481 1.00168.14 ATOM 110 CB ASP a 331 142.815 131.323 241.003 1.00168.14 ATOM 111 N SER a 332 143.078 134.430 240.345 1.00176.46 ATOM 112 CA SER a 332 142.371 135.641 239.980 1.00176.46 ATOM 113 C SER a 332 142.984 136.182 238.704 1.00176.46 ATOM 114 O SER a 332 142.279 136.650 237.799 1.00176.46 ATOM 115 CB SER a 332 142.451 136.665 241.110 1.00176.46 ATOM 116 N ILE a 333 144.306 136.045 238.598 1.00188.79 ATOM 117 CA ILE a 333 145.024 136.519 237.429 1.00188.79 ATOM 118 C ILE a 333 144.604 135.718 236.215 1.00188.79 ATOM 119 O ILE a 333 144.408 136.273 235.129 1.00188.79 ATOM 120 CB ILE a 333 146.541 136.431 237.666 1.00188.79 ATOM 121 N GLN a 334 144.516 134.400 236.355 1.00211.25 ATOM 122 CA GLN a 334 144.144 133.601 235.199 1.00211.25 ATOM 123 C GLN a 334 142.728 133.927 234.753 1.00211.25 ATOM 124 O GLN a 334 142.438 133.933 233.554 1.00211.25 ATOM 125 CB GLN a 334 144.274 132.116 235.518 1.00211.25 TER