HEADER PROTON TRANSPORT 31-DEC-69 6VQJ TITLE Mammalian V-ATPase from rat brain collar and peripheral stalks TITLE 2 rotational state 2 (from focused refinement) COMPND MOL_ID: 4; COMPND 2 MOLECULE: V-type proton ATPase 116 kDa subunit a isoform 1; COMPND 3 CHAIN: a; EXPDTA ELECTRON MICROSCOPY DBREF 6VQJ a 1 838 UNP P25286 VPP1_RAT 1 838 SEQRES 1 a 30 LEU ALA GLN LEU PHE LEU GLN SER GLU ALA ALA TYR CYS SEQRES 2 a 30 CYS VAL SER GLU LEU GLU GLU LEU GLY LYS VAL GLN PHE SEQRES 3 a 30 ARG ASP LEU ASN SEQRES 1 a 25 CYS ASN ILE ASP VAL THR GLN LYS CYS LEU ILE ALA GLU SEQRES 2 a 25 VAL TRP CYS PRO VAL THR ASP LEU ASP SER ILE GLN ATOM 1 N LEU a 12 158.888 136.110 240.021 1.00 81.17 ATOM 2 CA LEU a 12 158.619 134.740 240.448 1.00 81.17 ATOM 3 C LEU a 12 158.280 133.855 239.245 1.00 81.17 ATOM 4 O LEU a 12 159.145 133.165 238.712 1.00 81.17 ATOM 5 CB LEU a 12 157.501 134.692 241.501 1.00 81.17 ATOM 6 N ALA a 13 157.018 133.861 238.834 1.00 64.01 ATOM 7 CA ALA a 13 156.553 133.012 237.750 1.00 64.01 ATOM 8 C ALA a 13 156.718 133.681 236.396 1.00 64.01 ATOM 9 O ALA a 13 156.762 134.904 236.288 1.00 64.01 ATOM 10 CB ALA a 13 155.076 132.681 237.950 1.00 64.01 ATOM 11 N GLN a 14 156.829 132.868 235.353 1.00 56.76 ATOM 12 CA GLN a 14 157.002 133.400 234.010 1.00 56.76 ATOM 13 C GLN a 14 155.647 133.322 233.319 1.00 56.76 ATOM 14 O GLN a 14 155.152 132.227 233.040 1.00 56.76 ATOM 15 CB GLN a 14 158.066 132.620 233.249 1.00 56.76 ATOM 16 N LEU a 15 155.060 134.487 233.038 1.00 70.68 ATOM 17 CA LEU a 15 153.738 134.606 232.419 1.00 70.68 ATOM 18 C LEU a 15 153.848 134.864 230.919 1.00 70.68 ATOM 19 O LEU a 15 154.493 135.837 230.507 1.00 70.68 ATOM 20 CB LEU a 15 152.922 135.721 233.069 1.00 70.68 ATOM 21 N PHE a 16 153.240 133.989 230.113 1.00 62.89 ATOM 22 CA PHE a 16 153.321 134.073 228.661 1.00 62.89 ATOM 23 C PHE a 16 151.959 134.543 228.179 1.00 62.89 ATOM 24 O PHE a 16 150.984 133.786 228.218 1.00 62.89 ATOM 25 CB PHE a 16 153.694 132.732 228.040 1.00 62.89 ATOM 26 N LEU a 17 151.888 135.797 227.771 1.00 64.03 ATOM 27 CA LEU a 17 150.649 136.435 227.357 1.00 64.03 ATOM 28 C LEU a 17 150.696 136.838 225.888 1.00 64.03 ATOM 29 O LEU a 17 151.619 137.545 225.477 1.00 64.03 ATOM 30 CB LEU a 17 150.368 137.650 228.238 1.00 64.03 ATOM 31 N GLN a 18 149.736 136.358 225.093 1.00 79.47 ATOM 32 CA GLN a 18 149.640 136.788 223.699 1.00 79.47 ATOM 33 C GLN a 18 149.421 138.299 223.665 1.00 79.47 ATOM 34 O GLN a 18 148.786 138.865 224.556 1.00 79.47 ATOM 35 CB GLN a 18 148.497 136.076 222.981 1.00 79.47 ATOM 36 N SER a 19 149.927 138.953 222.614 1.00 76.41 ATOM 37 CA SER a 19 149.928 140.416 222.593 1.00 76.41 ATOM 38 C SER a 19 148.543 140.993 222.841 1.00 76.41 ATOM 39 O SER a 19 148.362 141.869 223.709 1.00 76.41 ATOM 40 CB SER a 19 150.459 140.909 221.248 1.00 76.41 ATOM 41 N GLU a 20 147.534 140.462 222.150 1.00 75.12 ATOM 42 CA GLU a 20 146.237 141.095 222.299 1.00 75.12 ATOM 43 C GLU a 20 145.775 140.852 223.714 1.00 75.12 ATOM 44 O GLU a 20 145.302 141.760 224.404 1.00 75.12 ATOM 45 CB GLU a 20 145.249 140.522 221.283 1.00 75.12 ATOM 46 N ALA a 21 145.991 139.629 224.172 1.00 73.69 ATOM 47 CA ALA a 21 145.578 139.264 225.508 1.00 73.69 ATOM 48 C ALA a 21 146.353 140.113 226.490 1.00 73.69 ATOM 49 O ALA a 21 145.815 140.559 227.500 1.00 73.69 ATOM 50 CB ALA a 21 145.808 137.776 225.756 1.00 73.69 ATOM 51 N ALA a 22 147.618 140.387 226.146 1.00 76.94 ATOM 52 CA ALA a 22 148.521 141.139 227.004 1.00 76.94 ATOM 53 C ALA a 22 147.999 142.523 227.298 1.00 76.94 ATOM 54 O ALA a 22 148.117 143.004 228.429 1.00 76.94 ATOM 55 CB ALA a 22 149.899 141.243 226.350 1.00 76.94 ATOM 56 N TYR a 23 147.379 143.171 226.324 1.00 59.23 ATOM 57 CA TYR a 23 146.851 144.487 226.656 1.00 59.23 ATOM 58 C TYR a 23 145.780 144.365 227.733 1.00 59.23 ATOM 59 O TYR a 23 145.860 145.026 228.785 1.00 59.23 ATOM 60 CB TYR a 23 146.294 145.160 225.406 1.00 59.23 ATOM 61 N CYS a 24 144.930 143.352 227.599 1.00 56.97 ATOM 62 CA CYS a 24 143.848 143.167 228.551 1.00 56.97 ATOM 63 C CYS a 24 144.408 142.742 229.886 1.00 56.97 ATOM 64 O CYS a 24 143.962 143.218 230.940 1.00 56.97 ATOM 65 CB CYS a 24 142.868 142.119 228.031 1.00 56.97 ATOM 66 N CYS a 25 145.407 141.877 229.864 1.00 60.83 ATOM 67 CA CYS a 25 145.864 141.324 231.116 1.00 60.83 ATOM 68 C CYS a 25 146.583 142.406 231.893 1.00 60.83 ATOM 69 O CYS a 25 146.396 142.516 233.106 1.00 60.83 ATOM 70 CB CYS a 25 146.776 140.131 230.854 1.00 60.83 ATOM 71 N VAL a 26 147.455 143.176 231.239 1.00 51.15 ATOM 72 CA VAL a 26 148.210 144.121 232.040 1.00 51.15 ATOM 73 C VAL a 26 147.217 145.076 232.663 1.00 51.15 ATOM 74 O VAL a 26 147.317 145.430 233.840 1.00 51.15 ATOM 75 CB VAL a 26 149.255 144.860 231.191 1.00 51.15 ATOM 76 N SER a 27 146.216 145.477 231.870 1.00 66.62 ATOM 77 CA SER a 27 145.195 146.411 232.333 1.00 66.62 ATOM 78 C SER a 27 144.497 145.905 233.589 1.00 66.62 ATOM 79 O SER a 27 144.479 146.570 234.640 1.00 66.62 ATOM 80 CB SER a 27 144.178 146.653 231.217 1.00 66.62 ATOM 81 N GLU a 28 144.049 144.653 233.535 1.00 75.73 ATOM 82 CA GLU a 28 143.281 144.082 234.630 1.00 75.73 ATOM 83 C GLU a 28 144.163 143.837 235.829 1.00 75.73 ATOM 84 O GLU a 28 143.731 144.018 236.969 1.00 75.73 ATOM 85 CB GLU a 28 142.601 142.789 234.191 1.00 75.73 ATOM 86 N LEU a 29 145.400 143.437 235.601 1.00 69.94 ATOM 87 CA LEU a 29 146.198 143.016 236.726 1.00 69.94 ATOM 88 C LEU a 29 146.676 144.261 237.421 1.00 69.94 ATOM 89 O LEU a 29 146.755 144.304 238.651 1.00 69.94 ATOM 90 CB LEU a 29 147.377 142.172 236.260 1.00 69.94 ATOM 91 N GLU a 30 146.897 145.308 236.636 1.00 65.40 ATOM 92 CA GLU a 30 147.351 146.567 237.181 1.00 65.40 ATOM 93 C GLU a 30 146.256 147.133 238.056 1.00 65.40 ATOM 94 O GLU a 30 146.523 147.674 239.136 1.00 65.40 ATOM 95 CB GLU a 30 147.720 147.526 236.055 1.00 65.40 ATOM 96 N GLU a 31 145.006 147.007 237.611 1.00 53.47 ATOM 97 CA GLU a 31 143.949 147.469 238.489 1.00 53.47 ATOM 98 C GLU a 31 143.824 146.550 239.694 1.00 53.47 ATOM 99 O GLU a 31 143.567 147.020 240.806 1.00 53.47 ATOM 100 CB GLU a 31 142.630 147.537 237.729 1.00 53.47 ATOM 101 N LEU a 32 143.988 145.240 239.497 1.00 60.22 ATOM 102 CA LEU a 32 143.946 144.335 240.638 1.00 60.22 ATOM 103 C LEU a 32 145.050 144.656 241.638 1.00 60.22 ATOM 104 O LEU a 32 144.814 144.668 242.851 1.00 60.22 ATOM 105 CB LEU a 32 144.059 142.893 240.150 1.00 60.22 ATOM 106 N GLY a 33 146.265 144.902 241.144 1.00 59.78 ATOM 107 CA GLY a 33 147.361 145.374 241.975 1.00 59.78 ATOM 108 C GLY a 33 148.119 144.408 242.870 1.00 59.78 ATOM 109 O GLY a 33 148.688 144.855 243.866 1.00 59.78 ATOM 110 N LYS a 34 148.176 143.113 242.570 1.00 54.51 ATOM 111 CA LYS a 34 148.891 142.226 243.483 1.00 54.51 ATOM 112 C LYS a 34 150.172 141.610 242.930 1.00 54.51 ATOM 113 O LYS a 34 150.730 140.715 243.566 1.00 54.51 ATOM 114 CB LYS a 34 147.954 141.111 243.947 1.00 54.51 ATOM 115 N VAL a 35 150.652 142.035 241.780 1.00 55.84 ATOM 116 CA VAL a 35 151.851 141.424 241.234 1.00 55.84 ATOM 117 C VAL a 35 152.837 142.516 240.857 1.00 55.84 ATOM 118 O VAL a 35 152.452 143.653 240.570 1.00 55.84 ATOM 119 CB VAL a 35 151.553 140.504 240.036 1.00 55.84 ATOM 120 N GLN a 36 154.123 142.182 240.915 1.00 61.36 ATOM 121 CA GLN a 36 155.174 143.121 240.524 1.00 61.36 ATOM 122 C GLN a 36 156.054 142.471 239.463 1.00 61.36 ATOM 123 O GLN a 36 156.585 141.377 239.679 1.00 61.36 ATOM 124 CB GLN a 36 156.005 143.571 241.729 1.00 61.36 ATOM 125 N PHE a 37 156.197 143.138 238.319 1.00 65.61 ATOM 126 CA PHE a 37 157.061 142.691 237.229 1.00 65.61 ATOM 127 C PHE a 37 158.472 143.265 237.341 1.00 65.61 ATOM 128 O PHE a 37 158.655 144.401 237.785 1.00 65.61 ATOM 129 CB PHE a 37 156.453 143.070 235.877 1.00 65.61 ATOM 130 N ARG a 38 159.467 142.467 236.950 1.00 67.48 ATOM 131 CA ARG a 38 160.847 142.930 236.849 1.00 67.48 ATOM 132 C ARG a 38 161.175 143.271 235.396 1.00 67.48 ATOM 133 O ARG a 38 160.601 142.701 234.467 1.00 67.48 ATOM 134 CB ARG a 38 161.820 141.870 237.373 1.00 67.48 ATOM 135 N ASP a 39 162.108 144.208 235.203 1.00 66.95 ATOM 136 CA ASP a 39 162.697 144.495 233.891 1.00 66.95 ATOM 137 C ASP a 39 163.744 143.457 233.505 1.00 66.95 ATOM 138 O ASP a 39 164.831 143.408 234.083 1.00 66.95 ATOM 139 CB ASP a 39 163.302 145.893 233.867 1.00 66.95 ATOM 140 N LEU a 40 163.428 142.665 232.494 1.00 57.23 ATOM 141 CA LEU a 40 164.206 141.523 232.036 1.00 57.23 ATOM 142 C LEU a 40 165.290 141.900 231.049 1.00 57.23 ATOM 143 O LEU a 40 166.140 141.066 230.728 1.00 57.23 ATOM 144 CB LEU a 40 163.298 140.480 231.386 1.00 57.23 ATOM 145 N ASN a 41 165.294 143.138 230.584 1.00 61.83 ATOM 146 CA ASN a 41 166.204 143.596 229.539 1.00 61.83 ATOM 147 C ASN a 41 166.687 144.987 229.880 1.00 61.83 ATOM 148 O ASN a 41 166.315 145.979 229.246 1.00 61.83 ATOM 149 CB ASN a 41 165.517 143.571 228.175 1.00 61.83 TER ATOM 1 N CYS a 310 158.956 144.541 230.428 1.00 68.91 ATOM 2 CA CYS a 310 158.677 143.179 230.011 1.00 68.91 ATOM 3 C CYS a 310 159.859 142.610 229.243 1.00 68.91 ATOM 4 O CYS a 310 160.799 143.320 228.885 1.00 68.91 ATOM 5 CB CYS a 310 157.405 143.121 229.164 1.00 68.91 ATOM 6 N ASN a 311 159.794 141.301 229.000 1.00 90.22 ATOM 7 CA ASN a 311 160.674 140.596 228.077 1.00 90.22 ATOM 8 C ASN a 311 159.925 140.155 226.831 1.00 90.22 ATOM 9 O ASN a 311 158.928 139.431 226.919 1.00 90.22 ATOM 10 CB ASN a 311 161.299 139.377 228.751 1.00 90.22 ATOM 11 N ILE a 312 160.411 140.598 225.681 1.00111.13 ATOM 12 CA ILE a 312 159.759 140.331 224.410 1.00111.13 ATOM 13 C ILE a 312 160.333 139.030 223.869 1.00111.13 ATOM 14 O ILE a 312 161.549 138.907 223.684 1.00111.13 ATOM 15 CB ILE a 312 159.972 141.485 223.424 1.00111.13 ATOM 16 N ASP a 313 159.465 138.063 223.615 1.00155.30 ATOM 17 CA ASP a 313 159.929 136.783 223.121 1.00155.30 ATOM 18 C ASP a 313 160.174 136.872 221.623 1.00155.30 ATOM 19 O ASP a 313 159.680 137.771 220.939 1.00155.30 ATOM 20 CB ASP a 313 158.917 135.680 223.418 1.00155.30 ATOM 21 N VAL a 314 160.955 135.930 221.111 1.00184.79 ATOM 22 CA VAL a 314 161.205 135.876 219.686 1.00184.79 ATOM 23 C VAL a 314 160.343 134.834 218.987 1.00184.79 ATOM 24 O VAL a 314 159.863 135.077 217.881 1.00184.79 ATOM 25 CB VAL a 314 162.701 135.612 219.430 1.00184.79 ATOM 26 N THR a 315 160.084 133.689 219.617 1.00174.93 ATOM 27 CA THR a 315 159.353 132.675 218.868 1.00174.93 ATOM 28 C THR a 315 157.872 132.983 218.723 1.00174.93 ATOM 29 O THR a 315 157.237 132.498 217.779 1.00174.93 ATOM 30 CB THR a 315 159.526 131.315 219.544 1.00174.93 ATOM 31 N GLN a 316 157.318 133.784 219.612 1.00130.89 ATOM 32 CA GLN a 316 155.890 134.008 219.628 1.00130.89 ATOM 33 C GLN a 316 155.595 135.478 219.793 1.00130.89 ATOM 34 O GLN a 316 156.369 136.217 220.401 1.00130.89 ATOM 35 CB GLN a 316 155.213 133.247 220.765 1.00130.89 ATOM 36 N LYS a 317 154.473 135.911 219.241 1.00 87.72 ATOM 37 CA LYS a 317 154.123 137.298 219.463 1.00 87.72 ATOM 38 C LYS a 317 153.387 137.298 220.800 1.00 87.72 ATOM 39 O LYS a 317 152.175 137.492 220.908 1.00 87.72 ATOM 40 CB LYS a 317 153.275 137.831 218.318 1.00 87.72 ATOM 41 N CYS a 318 154.177 137.038 221.837 1.00 60.62 ATOM 42 CA CYS a 318 153.709 136.883 223.205 1.00 60.62 ATOM 43 C CYS a 318 154.805 137.414 224.103 1.00 60.62 ATOM 44 O CYS a 318 155.987 137.229 223.805 1.00 60.62 ATOM 45 CB CYS a 318 153.389 135.429 223.554 1.00 60.62 ATOM 46 N LEU a 319 154.433 138.066 225.187 1.00 59.21 ATOM 47 CA LEU a 319 155.434 138.503 226.134 1.00 59.21 ATOM 48 C LEU a 319 155.382 137.643 227.382 1.00 59.21 ATOM 49 O LEU a 319 154.304 137.314 227.885 1.00 59.21 ATOM 50 CB LEU a 319 155.235 139.969 226.511 1.00 59.21 ATOM 51 N ILE a 320 156.558 137.262 227.851 1.00 85.16 ATOM 52 CA ILE a 320 156.711 136.411 229.020 1.00 85.16 ATOM 53 C ILE a 320 157.458 137.253 230.036 1.00 85.16 ATOM 54 O ILE a 320 158.457 137.896 229.690 1.00 85.16 ATOM 55 CB ILE a 320 157.469 135.110 228.700 1.00 85.16 ATOM 56 N ALA a 321 156.979 137.268 231.274 1.00 84.18 ATOM 57 CA ALA a 321 157.684 138.042 232.284 1.00 84.18 ATOM 58 C ALA a 321 157.825 137.302 233.602 1.00 84.18 ATOM 59 O ALA a 321 157.009 136.440 233.942 1.00 84.18 ATOM 60 CB ALA a 321 156.968 139.374 232.554 1.00 84.18 ATOM 61 N GLU a 322 158.891 137.628 234.329 1.00 78.19 ATOM 62 CA GLU a 322 159.004 137.162 235.699 1.00 78.19 ATOM 63 C GLU a 322 158.170 138.094 236.559 1.00 78.19 ATOM 64 O GLU a 322 158.425 139.303 236.605 1.00 78.19 ATOM 65 CB GLU a 322 160.457 137.157 236.156 1.00 78.19 ATOM 66 N VAL a 323 157.190 137.539 237.241 1.00 80.04 ATOM 67 CA VAL a 323 156.209 138.301 237.989 1.00 80.04 ATOM 68 C VAL a 323 156.218 137.762 239.402 1.00 80.04 ATOM 69 O VAL a 323 156.131 136.544 239.591 1.00 80.04 ATOM 70 CB VAL a 323 154.800 138.210 237.378 1.00 80.04 ATOM 71 N TRP a 324 156.316 138.630 240.392 1.00 65.91 ATOM 72 CA TRP a 324 156.204 138.136 241.748 1.00 65.91 ATOM 73 C TRP a 324 154.779 138.385 242.198 1.00 65.91 ATOM 74 O TRP a 324 154.156 139.386 241.825 1.00 65.91 ATOM 75 CB TRP a 324 157.199 138.818 242.683 1.00 65.91 ATOM 76 N CYS a 325 154.265 137.445 242.982 1.00 61.51 ATOM 77 CA CYS a 325 152.934 137.514 243.460 1.00 61.51 ATOM 78 C CYS a 325 152.839 136.747 244.770 1.00 61.51 ATOM 79 O CYS a 325 153.408 135.648 244.878 1.00 61.51 ATOM 80 CB CYS a 325 151.941 136.961 242.444 1.00 61.51 ATOM 81 N PRO a 326 152.196 137.316 245.779 1.00102.22 ATOM 82 CA PRO a 326 151.943 136.564 247.005 1.00102.22 ATOM 83 C PRO a 326 151.114 135.320 246.761 1.00102.22 ATOM 84 O PRO a 326 150.265 135.267 245.873 1.00102.22 ATOM 85 CB PRO a 326 151.172 137.560 247.877 1.00102.22 ATOM 86 N VAL a 327 151.359 134.325 247.603 1.00121.23 ATOM 87 CA VAL a 327 150.627 133.073 247.524 1.00121.23 ATOM 88 C VAL a 327 149.169 133.332 247.840 1.00121.23 ATOM 89 O VAL a 327 148.265 132.809 247.180 1.00121.23 ATOM 90 CB VAL a 327 151.244 132.032 248.473 1.00121.23 ATOM 91 N THR a 328 148.924 134.181 248.837 1.00106.87 ATOM 92 CA THR a 328 147.578 134.469 249.305 1.00106.87 ATOM 93 C THR a 328 146.674 134.877 248.161 1.00106.87 ATOM 94 O THR a 328 145.512 134.468 248.103 1.00106.87 ATOM 95 CB THR a 328 147.608 135.576 250.355 1.00106.87 ATOM 96 N ASP a 329 147.180 135.674 247.235 1.00101.12 ATOM 97 CA ASP a 329 146.343 136.192 246.169 1.00101.12 ATOM 98 C ASP a 329 146.419 135.347 244.908 1.00101.12 ATOM 99 O ASP a 329 145.866 135.738 243.875 1.00101.12 ATOM 100 CB ASP a 329 146.738 137.633 245.857 1.00101.12 ATOM 101 N LEU a 330 147.060 134.177 244.979 1.00103.49 ATOM 102 CA LEU a 330 147.266 133.387 243.771 1.00103.49 ATOM 103 C LEU a 330 145.956 132.983 243.117 1.00103.49 ATOM 104 O LEU a 330 145.850 133.023 241.881 1.00103.49 ATOM 105 CB LEU a 330 148.090 132.146 244.099 1.00103.49 ATOM 106 N ASP a 331 144.913 132.705 243.898 1.00 93.35 ATOM 107 CA ASP a 331 143.691 132.301 243.225 1.00 93.35 ATOM 108 C ASP a 331 143.096 133.541 242.610 1.00 93.35 ATOM 109 O ASP a 331 142.505 133.501 241.522 1.00 93.35 ATOM 110 CB ASP a 331 142.730 131.650 244.211 1.00 93.35 ATOM 111 N SER a 332 143.254 134.651 243.323 1.00 98.38 ATOM 112 CA SER a 332 142.594 135.880 242.938 1.00 98.38 ATOM 113 C SER a 332 143.166 136.299 241.602 1.00 98.38 ATOM 114 O SER a 332 142.446 136.719 240.690 1.00 98.38 ATOM 115 CB SER a 332 142.810 136.955 243.999 1.00 98.38 ATOM 116 N ILE a 333 144.464 136.057 241.440 1.00 90.60 ATOM 117 CA ILE a 333 145.146 136.472 240.237 1.00 90.60 ATOM 118 C ILE a 333 144.802 135.518 239.129 1.00 90.60 ATOM 119 O ILE a 333 144.723 135.926 237.969 1.00 90.60 ATOM 120 CB ILE a 333 146.664 136.530 240.466 1.00 90.60 ATOM 121 N GLN a 334 144.616 134.233 239.431 1.00101.69 ATOM 122 CA GLN a 334 144.310 133.351 238.318 1.00101.69 ATOM 123 C GLN a 334 142.926 133.675 237.779 1.00101.69 ATOM 124 O GLN a 334 142.704 133.687 236.560 1.00101.69 ATOM 125 CB GLN a 334 144.388 131.895 238.764 1.00101.69 TER