HEADER PROTON TRANSPORT 31-DEC-69 6VQK TITLE Mammalian V-ATPase from rat brain collar and peripheral stalks TITLE 2 rotational state 3 (from focused refinement) COMPND MOL_ID: 4; COMPND 2 MOLECULE: V-type proton ATPase 116 kDa subunit a isoform 1; COMPND 3 CHAIN: a; EXPDTA ELECTRON MICROSCOPY DBREF 6VQK a 1 838 UNP P25286 VPP1_RAT 1 838 SEQRES 1 a 30 LEU ALA GLN LEU PHE LEU GLN SER GLU ALA ALA TYR CYS SEQRES 2 a 30 CYS VAL SER GLU LEU GLU GLU LEU GLY LYS VAL GLN PHE SEQRES 3 a 30 ARG ASP LEU ASN SEQRES 1 a 25 CYS ASN ILE ASP VAL THR GLN LYS CYS LEU ILE ALA GLU SEQRES 2 a 25 VAL TRP CYS PRO VAL THR ASP LEU ASP SER ILE GLN ATOM 1 N LEU a 12 159.661 135.521 239.777 1.00 99.96 ATOM 2 CA LEU a 12 160.099 136.112 238.483 1.00 99.96 ATOM 3 C LEU a 12 159.609 135.227 237.332 1.00 99.96 ATOM 4 O LEU a 12 160.438 134.857 236.478 1.00 99.96 ATOM 5 CB LEU a 12 161.626 136.231 238.478 1.00 99.96 ATOM 6 N ALA a 13 158.315 134.892 237.325 1.00115.82 ATOM 7 CA ALA a 13 157.739 134.047 236.252 1.00115.82 ATOM 8 C ALA a 13 157.676 134.832 234.937 1.00115.82 ATOM 9 O ALA a 13 157.585 136.073 234.995 1.00115.82 ATOM 10 CB ALA a 13 156.381 133.538 236.665 1.00115.82 ATOM 11 N GLN a 14 157.757 134.135 233.798 1.00 84.58 ATOM 12 CA GLN a 14 157.744 134.813 232.473 1.00 84.58 ATOM 13 C GLN a 14 156.437 134.482 231.744 1.00 84.58 ATOM 14 O GLN a 14 156.077 133.289 231.687 1.00 84.58 ATOM 15 CB GLN a 14 158.948 134.366 231.643 1.00 84.58 ATOM 16 N LEU a 15 155.775 135.501 231.188 1.00 70.95 ATOM 17 CA LEU a 15 154.565 135.288 230.422 1.00 70.95 ATOM 18 C LEU a 15 154.879 135.726 229.006 1.00 70.95 ATOM 19 O LEU a 15 155.685 136.632 228.784 1.00 70.95 ATOM 20 CB LEU a 15 153.378 136.067 230.985 1.00 70.95 ATOM 21 N PHE a 16 154.254 135.053 228.052 1.00 76.33 ATOM 22 CA PHE a 16 154.490 135.305 226.639 1.00 76.33 ATOM 23 C PHE a 16 153.211 135.312 225.821 1.00 76.33 ATOM 24 O PHE a 16 152.432 134.357 225.896 1.00 76.33 ATOM 25 CB PHE a 16 155.454 134.258 226.066 1.00 76.33 ATOM 26 N LEU a 17 152.986 136.381 225.056 1.00117.35 ATOM 27 CA LEU a 17 151.730 136.462 224.311 1.00117.35 ATOM 28 C LEU a 17 151.778 137.612 223.313 1.00117.35 ATOM 29 O LEU a 17 152.656 138.476 223.362 1.00117.35 ATOM 30 CB LEU a 17 150.534 136.640 225.250 1.00117.35 ATOM 31 N GLN a 18 150.768 137.636 222.442 1.00126.60 ATOM 32 CA GLN a 18 150.717 138.596 221.352 1.00126.60 ATOM 33 C GLN a 18 150.593 140.018 221.869 1.00126.60 ATOM 34 O GLN a 18 150.051 140.273 222.947 1.00126.60 ATOM 35 CB GLN a 18 149.542 138.289 220.428 1.00126.60 ATOM 36 N SER a 19 151.107 140.950 221.072 1.00125.54 ATOM 37 CA SER a 19 151.112 142.336 221.501 1.00125.54 ATOM 38 C SER a 19 149.696 142.866 221.680 1.00125.54 ATOM 39 O SER a 19 149.476 143.758 222.499 1.00125.54 ATOM 40 CB SER a 19 151.886 143.191 220.501 1.00125.54 ATOM 41 N GLU a 20 148.731 142.366 220.900 1.00114.25 ATOM 42 CA GLU a 20 147.355 142.827 221.077 1.00114.25 ATOM 43 C GLU a 20 146.793 142.289 222.377 1.00114.25 ATOM 44 O GLU a 20 146.199 143.032 223.183 1.00114.25 ATOM 45 CB GLU a 20 146.495 142.390 219.894 1.00114.25 ATOM 46 N ALA a 21 147.047 141.007 222.632 1.00111.41 ATOM 47 CA ALA a 21 146.624 140.442 223.891 1.00111.41 ATOM 48 C ALA a 21 147.385 141.133 224.995 1.00111.41 ATOM 49 O ALA a 21 146.843 141.372 226.077 1.00111.41 ATOM 50 CB ALA a 21 146.873 138.939 223.924 1.00111.41 ATOM 51 N ALA a 22 148.647 141.464 224.733 1.00117.79 ATOM 52 CA ALA a 22 149.409 142.183 225.741 1.00117.79 ATOM 53 C ALA a 22 148.790 143.546 226.023 1.00117.79 ATOM 54 O ALA a 22 148.764 143.983 227.173 1.00117.79 ATOM 55 CB ALA a 22 150.856 142.328 225.286 1.00117.79 ATOM 56 N TYR a 23 148.335 144.263 224.988 1.00118.63 ATOM 57 CA TYR a 23 147.702 145.559 225.218 1.00118.63 ATOM 58 C TYR a 23 146.544 145.406 226.185 1.00118.63 ATOM 59 O TYR a 23 146.442 146.111 227.205 1.00118.63 ATOM 60 CB TYR a 23 147.228 146.158 223.895 1.00118.63 ATOM 61 N CYS a 24 145.693 144.419 225.902 1.00124.95 ATOM 62 CA CYS a 24 144.502 144.263 226.724 1.00124.95 ATOM 63 C CYS a 24 144.912 143.872 228.132 1.00124.95 ATOM 64 O CYS a 24 144.350 144.359 229.125 1.00124.95 ATOM 65 CB CYS a 24 143.568 143.221 226.119 1.00124.95 ATOM 66 N CYS a 25 145.900 142.981 228.225 1.00132.17 ATOM 67 CA CYS a 25 146.283 142.452 229.517 1.00132.17 ATOM 68 C CYS a 25 146.868 143.563 230.348 1.00132.17 ATOM 69 O CYS a 25 146.680 143.593 231.562 1.00132.17 ATOM 70 CB CYS a 25 147.285 141.311 229.351 1.00132.17 ATOM 71 N VAL a 26 147.699 144.405 229.731 1.00139.88 ATOM 72 CA VAL a 26 148.297 145.484 230.494 1.00139.88 ATOM 73 C VAL a 26 147.179 146.333 231.038 1.00139.88 ATOM 74 O VAL a 26 147.219 146.783 232.187 1.00139.88 ATOM 75 CB VAL a 26 149.265 146.296 229.618 1.00139.88 ATOM 76 N SER a 27 146.143 146.550 230.220 1.00127.73 ATOM 77 CA SER a 27 145.028 147.355 230.689 1.00127.73 ATOM 78 C SER a 27 144.456 146.722 231.950 1.00127.73 ATOM 79 O SER a 27 144.313 147.369 233.005 1.00127.73 ATOM 80 CB SER a 27 143.971 147.464 229.591 1.00127.73 ATOM 81 N GLU a 28 144.262 145.405 231.880 1.00126.96 ATOM 82 CA GLU a 28 143.602 144.686 232.957 1.00126.96 ATOM 83 C GLU a 28 144.486 144.627 234.190 1.00126.96 ATOM 84 O GLU a 28 144.012 144.813 235.315 1.00126.96 ATOM 85 CB GLU a 28 143.237 143.278 232.483 1.00126.96 ATOM 86 N LEU a 29 145.785 144.416 233.993 1.00148.63 ATOM 87 CA LEU a 29 146.691 144.219 235.110 1.00148.63 ATOM 88 C LEU a 29 146.934 145.542 235.804 1.00148.63 ATOM 89 O LEU a 29 147.079 145.585 237.033 1.00148.63 ATOM 90 CB LEU a 29 147.998 143.594 234.623 1.00148.63 ATOM 91 N GLU a 30 146.950 146.633 235.032 1.00152.00 ATOM 92 CA GLU a 30 147.199 147.942 235.608 1.00152.00 ATOM 93 C GLU a 30 146.024 148.333 236.475 1.00152.00 ATOM 94 O GLU a 30 146.207 148.892 237.563 1.00152.00 ATOM 95 CB GLU a 30 147.431 148.975 234.509 1.00152.00 ATOM 96 N GLU a 31 144.801 148.065 236.006 1.00145.53 ATOM 97 CA GLU a 31 143.696 148.393 236.890 1.00145.53 ATOM 98 C GLU a 31 143.660 147.433 238.076 1.00145.53 ATOM 99 O GLU a 31 143.286 147.837 239.181 1.00145.53 ATOM 100 CB GLU a 31 142.377 148.365 236.126 1.00145.53 ATOM 101 N LEU a 32 144.032 146.161 237.867 1.00138.49 ATOM 102 CA LEU a 32 144.126 145.214 238.981 1.00138.49 ATOM 103 C LEU a 32 145.120 145.673 240.039 1.00138.49 ATOM 104 O LEU a 32 144.846 145.588 241.239 1.00138.49 ATOM 105 CB LEU a 32 144.521 143.835 238.463 1.00138.49 ATOM 106 N GLY a 33 146.292 146.137 239.607 1.00123.68 ATOM 107 CA GLY a 33 147.282 146.732 240.479 1.00123.68 ATOM 108 C GLY a 33 148.139 145.782 241.288 1.00123.68 ATOM 109 O GLY a 33 148.809 146.237 242.218 1.00123.68 ATOM 110 N LYS a 34 148.153 144.484 240.983 1.00100.89 ATOM 111 CA LYS a 34 148.922 143.547 241.798 1.00100.89 ATOM 112 C LYS a 34 150.152 142.965 241.108 1.00100.89 ATOM 113 O LYS a 34 150.705 141.979 241.602 1.00100.89 ATOM 114 CB LYS a 34 148.017 142.409 242.272 1.00100.89 ATOM 115 N VAL a 35 150.601 143.535 239.998 1.00102.71 ATOM 116 CA VAL a 35 151.705 142.961 239.239 1.00102.71 ATOM 117 C VAL a 35 152.894 143.902 239.286 1.00102.71 ATOM 118 O VAL a 35 152.763 145.096 238.998 1.00102.71 ATOM 119 CB VAL a 35 151.301 142.678 237.788 1.00102.71 ATOM 120 N GLN a 36 154.051 143.366 239.635 1.00 90.50 ATOM 121 CA GLN a 36 155.289 144.120 239.524 1.00 90.50 ATOM 122 C GLN a 36 156.091 143.550 238.359 1.00 90.50 ATOM 123 O GLN a 36 156.554 142.404 238.417 1.00 90.50 ATOM 124 CB GLN a 36 156.082 144.060 240.823 1.00 90.50 ATOM 125 N PHE a 37 156.250 144.362 237.322 1.00 78.98 ATOM 126 CA PHE a 37 156.925 144.000 236.085 1.00 78.98 ATOM 127 C PHE a 37 158.428 144.239 236.202 1.00 78.98 ATOM 128 O PHE a 37 158.870 145.134 236.926 1.00 78.98 ATOM 129 CB PHE a 37 156.353 144.795 234.911 1.00 78.98 ATOM 130 N ARG a 38 159.211 143.436 235.493 1.00 77.25 ATOM 131 CA ARG a 38 160.652 143.639 235.397 1.00 77.25 ATOM 132 C ARG a 38 160.972 144.162 234.002 1.00 77.25 ATOM 133 O ARG a 38 160.300 143.811 233.027 1.00 77.25 ATOM 134 CB ARG a 38 161.421 142.344 235.680 1.00 77.25 ATOM 135 N ASP a 39 162.002 145.004 233.901 1.00 86.57 ATOM 136 CA ASP a 39 162.504 145.451 232.604 1.00 86.57 ATOM 137 C ASP a 39 163.362 144.384 231.927 1.00 86.57 ATOM 138 O ASP a 39 164.432 144.025 232.426 1.00 86.57 ATOM 139 CB ASP a 39 163.302 146.741 232.760 1.00 86.57 ATOM 140 N LEU a 40 162.874 143.886 230.795 1.00 89.62 ATOM 141 CA LEU a 40 163.511 142.841 230.004 1.00 89.62 ATOM 142 C LEU a 40 164.657 143.314 229.114 1.00 89.62 ATOM 143 O LEU a 40 165.390 142.475 228.581 1.00 89.62 ATOM 144 CB LEU a 40 162.460 142.150 229.145 1.00 89.62 ATOM 145 N ASN a 41 164.826 144.618 228.918 1.00139.24 ATOM 146 CA ASN a 41 165.870 145.156 228.045 1.00139.24 ATOM 147 C ASN a 41 166.549 146.360 228.667 1.00139.24 ATOM 148 O ASN a 41 166.303 147.507 228.270 1.00139.24 ATOM 149 CB ASN a 41 165.302 145.513 226.674 1.00139.24 TER ATOM 1 N CYS a 310 159.474 145.616 228.484 1.00107.75 ATOM 2 CA CYS a 310 159.261 144.237 228.076 1.00107.75 ATOM 3 C CYS a 310 160.358 143.849 227.101 1.00107.75 ATOM 4 O CYS a 310 161.201 144.670 226.728 1.00107.75 ATOM 5 CB CYS a 310 157.877 144.053 227.453 1.00107.75 ATOM 6 N ASN a 311 160.350 142.582 226.699 1.00115.07 ATOM 7 CA ASN a 311 161.153 142.094 225.586 1.00115.07 ATOM 8 C ASN a 311 160.282 141.654 224.420 1.00115.07 ATOM 9 O ASN a 311 159.283 140.952 224.609 1.00115.07 ATOM 10 CB ASN a 311 162.034 140.922 226.017 1.00115.07 ATOM 11 N ILE a 312 160.663 142.088 223.224 1.00168.53 ATOM 12 CA ILE a 312 159.899 141.831 222.011 1.00168.53 ATOM 13 C ILE a 312 160.421 140.544 221.390 1.00168.53 ATOM 14 O ILE a 312 161.630 140.396 221.166 1.00168.53 ATOM 15 CB ILE a 312 160.015 143.006 221.026 1.00168.53 ATOM 16 N ASP a 313 159.516 139.615 221.115 1.00207.55 ATOM 17 CA ASP a 313 159.904 138.349 220.523 1.00207.55 ATOM 18 C ASP a 313 160.269 138.543 219.057 1.00207.55 ATOM 19 O ASP a 313 159.868 139.510 218.406 1.00207.55 ATOM 20 CB ASP a 313 158.790 137.311 220.647 1.00207.55 ATOM 21 N VAL a 314 161.048 137.599 218.545 1.00252.93 ATOM 22 CA VAL a 314 161.388 137.559 217.135 1.00252.93 ATOM 23 C VAL a 314 160.500 136.578 216.384 1.00252.93 ATOM 24 O VAL a 314 160.120 136.835 215.244 1.00252.93 ATOM 25 CB VAL a 314 162.880 137.215 216.950 1.00252.93 ATOM 26 N THR a 315 160.163 135.450 217.010 1.00256.60 ATOM 27 CA THR a 315 159.411 134.408 216.315 1.00256.60 ATOM 28 C THR a 315 158.021 134.906 215.929 1.00256.60 ATOM 29 O THR a 315 157.579 134.738 214.788 1.00256.60 ATOM 30 CB THR a 315 159.311 133.163 217.187 1.00256.60 ATOM 31 N GLN a 316 157.316 135.517 216.875 1.00201.31 ATOM 32 CA GLN a 316 155.987 136.061 216.646 1.00201.31 ATOM 33 C GLN a 316 155.929 137.450 217.251 1.00201.31 ATOM 34 O GLN a 316 156.680 137.768 218.178 1.00201.31 ATOM 35 CB GLN a 316 154.897 135.174 217.260 1.00201.31 ATOM 36 N LYS a 317 155.033 138.294 216.730 1.00148.31 ATOM 37 CA LYS a 317 154.996 139.653 217.249 1.00148.31 ATOM 38 C LYS a 317 154.345 139.565 218.618 1.00148.31 ATOM 39 O LYS a 317 153.210 140.002 218.832 1.00148.31 ATOM 40 CB LYS a 317 154.216 140.590 216.331 1.00148.31 ATOM 41 N CYS a 318 155.094 138.998 219.545 1.00151.25 ATOM 42 CA CYS a 318 154.661 138.743 220.899 1.00151.25 ATOM 43 C CYS a 318 155.696 139.324 221.842 1.00151.25 ATOM 44 O CYS a 318 156.857 139.517 221.471 1.00151.25 ATOM 45 CB CYS a 318 154.480 137.240 221.153 1.00151.25 ATOM 46 N LEU a 319 155.259 139.654 223.044 1.00116.04 ATOM 47 CA LEU a 319 156.155 140.114 224.087 1.00116.04 ATOM 48 C LEU a 319 156.166 139.099 225.219 1.00116.04 ATOM 49 O LEU a 319 155.167 138.406 225.466 1.00116.04 ATOM 50 CB LEU a 319 155.738 141.486 224.620 1.00116.04 ATOM 51 N ILE a 320 157.318 138.971 225.869 1.00112.68 ATOM 52 CA ILE a 320 157.414 138.212 227.105 1.00112.68 ATOM 53 C ILE a 320 157.799 139.189 228.202 1.00112.68 ATOM 54 O ILE a 320 158.679 140.039 228.017 1.00112.68 ATOM 55 CB ILE a 320 158.437 137.065 227.008 1.00112.68 ATOM 56 N ALA a 321 157.126 139.066 229.334 1.00109.19 ATOM 57 CA ALA a 321 157.295 139.945 230.477 1.00109.19 ATOM 58 C ALA a 321 157.405 139.131 231.752 1.00109.19 ATOM 59 O ALA a 321 156.819 138.053 231.861 1.00109.19 ATOM 60 CB ALA a 321 156.137 140.944 230.599 1.00109.19 ATOM 61 N GLU a 322 158.159 139.637 232.715 1.00107.67 ATOM 62 CA GLU a 322 158.340 138.922 233.966 1.00107.67 ATOM 63 C GLU a 322 157.710 139.755 235.072 1.00107.67 ATOM 64 O GLU a 322 157.826 140.982 235.080 1.00107.67 ATOM 65 CB GLU a 322 159.823 138.681 234.270 1.00107.67 ATOM 66 N VAL a 323 157.020 139.091 235.993 1.00101.10 ATOM 67 CA VAL a 323 156.440 139.779 237.136 1.00101.10 ATOM 68 C VAL a 323 156.801 138.978 238.370 1.00101.10 ATOM 69 O VAL a 323 156.941 137.753 238.326 1.00101.10 ATOM 70 CB VAL a 323 154.910 139.952 237.028 1.00101.10 ATOM 71 N TRP a 324 156.914 139.671 239.480 1.00 80.21 ATOM 72 CA TRP a 324 157.079 139.022 240.769 1.00 80.21 ATOM 73 C TRP a 324 155.773 139.079 241.538 1.00 80.21 ATOM 74 O TRP a 324 155.308 140.163 241.890 1.00 80.21 ATOM 75 CB TRP a 324 158.208 139.676 241.561 1.00 80.21 ATOM 76 N CYS a 325 155.144 137.931 241.744 1.00 98.00 ATOM 77 CA CYS a 325 153.865 138.003 242.421 1.00 98.00 ATOM 78 C CYS a 325 153.711 136.769 243.289 1.00 98.00 ATOM 79 O CYS a 325 154.213 135.696 242.932 1.00 98.00 ATOM 80 CB CYS a 325 152.699 138.107 241.430 1.00 98.00 ATOM 81 N PRO a 326 153.037 136.889 244.425 1.00148.25 ATOM 82 CA PRO a 326 152.760 135.718 245.260 1.00148.25 ATOM 83 C PRO a 326 151.726 134.831 244.593 1.00148.25 ATOM 84 O PRO a 326 151.063 135.229 243.631 1.00148.25 ATOM 85 CB PRO a 326 152.236 136.315 246.569 1.00148.25 ATOM 86 N VAL a 327 151.600 133.601 245.099 1.00166.17 ATOM 87 CA VAL a 327 150.676 132.678 244.454 1.00166.17 ATOM 88 C VAL a 327 149.269 133.253 244.500 1.00166.17 ATOM 89 O VAL a 327 148.502 133.105 243.543 1.00166.17 ATOM 90 CB VAL a 327 150.751 131.289 245.112 1.00166.17 ATOM 91 N THR a 328 148.884 133.857 245.636 1.00160.25 ATOM 92 CA THR a 328 147.520 134.369 245.771 1.00160.25 ATOM 93 C THR a 328 147.255 135.277 244.591 1.00160.25 ATOM 94 O THR a 328 146.248 135.152 243.866 1.00160.25 ATOM 95 CB THR a 328 147.353 135.132 247.084 1.00160.25 ATOM 96 N ASP a 329 148.240 136.112 244.313 1.00138.65 ATOM 97 CA ASP a 329 148.067 137.095 243.286 1.00138.65 ATOM 98 C ASP a 329 148.158 136.370 241.963 1.00138.65 ATOM 99 O ASP a 329 147.523 136.788 240.999 1.00138.65 ATOM 100 CB ASP a 329 149.121 138.194 243.413 1.00138.65 ATOM 101 N LEU a 330 149.045 135.372 241.858 1.00135.02 ATOM 102 CA LEU a 330 149.189 134.688 240.577 1.00135.02 ATOM 103 C LEU a 330 147.885 134.014 240.145 1.00135.02 ATOM 104 O LEU a 330 147.553 133.999 238.958 1.00135.02 ATOM 105 CB LEU a 330 150.311 133.652 240.667 1.00135.02 ATOM 106 N ASP a 331 147.121 133.466 241.098 1.00115.67 ATOM 107 CA ASP a 331 145.834 132.874 240.746 1.00115.67 ATOM 108 C ASP a 331 144.864 133.956 240.317 1.00115.67 ATOM 109 O ASP a 331 144.161 133.835 239.294 1.00115.67 ATOM 110 CB ASP a 331 145.279 132.077 241.921 1.00115.67 ATOM 111 N SER a 332 144.910 135.080 241.039 1.00113.12 ATOM 112 CA SER a 332 143.994 136.154 240.701 1.00113.12 ATOM 113 C SER a 332 144.349 136.683 239.329 1.00113.12 ATOM 114 O SER a 332 143.472 137.031 238.537 1.00113.12 ATOM 115 CB SER a 332 144.061 137.259 241.751 1.00113.12 ATOM 116 N ILE a 333 145.646 136.750 239.049 1.00109.09 ATOM 117 CA ILE a 333 146.125 137.255 237.780 1.00109.09 ATOM 118 C ILE a 333 145.717 136.316 236.670 1.00109.09 ATOM 119 O ILE a 333 145.466 136.758 235.558 1.00109.09 ATOM 120 CB ILE a 333 147.648 137.456 237.818 1.00109.09 ATOM 121 N GLN a 334 145.846 135.005 236.879 1.00103.25 ATOM 122 CA GLN a 334 145.459 134.124 235.790 1.00103.25 ATOM 123 C GLN a 334 144.019 134.410 235.417 1.00103.25 ATOM 124 O GLN a 334 143.668 134.510 234.231 1.00103.25 ATOM 125 CB GLN a 334 145.645 132.665 236.191 1.00103.25 TER