HEADER Ribosome/TRANSLATION 31-DEC-69 6W2S TITLE Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) TITLE 2 bound to the small ribosomal subunit in the open state (Class 1) COMPND MOL_ID: 38; COMPND 2 MOLECULE: Eukaryotic translation initiation factor 3 subunit E; COMPND 3 CHAIN: 3; EXPDTA ELECTRON MICROSCOPY DBREF 6W2S 3 -16 445 UNP G1SUC8 G1SUC8_RABI 1 462 SEQRES 1 3 26 ALA VAL SER PRO TYR GLN GLN VAL ILE GLU LYS THR LYS SEQRES 2 3 26 SER LEU SER PHE ARG SER GLN MET LEU ALA MET ASN ILE ATOM 1 N ALA 3 397 202.302 223.843 356.216 1.00173.24 ATOM 2 CA ALA 3 397 201.006 224.497 355.909 1.00172.80 ATOM 3 C ALA 3 397 199.854 223.723 356.564 1.00172.82 ATOM 4 O ALA 3 397 199.982 222.491 356.724 1.00172.16 ATOM 5 CB ALA 3 397 200.812 224.588 354.415 1.00172.10 ATOM 6 N VAL 3 398 198.774 224.431 356.916 1.00172.69 ATOM 7 CA VAL 3 398 197.504 223.858 357.458 1.00172.35 ATOM 8 C VAL 3 398 196.416 224.016 356.389 1.00172.30 ATOM 9 O VAL 3 398 195.707 225.045 356.407 1.00172.68 ATOM 10 CB VAL 3 398 197.097 224.516 358.793 1.00171.45 ATOM 11 CG1 VAL 3 398 195.808 223.925 359.354 1.00170.62 ATOM 12 CG2 VAL 3 398 198.212 224.429 359.826 1.00171.12 ATOM 13 N SER 3 399 196.317 223.038 355.482 1.00172.04 ATOM 14 CA SER 3 399 195.203 222.869 354.511 1.00171.98 ATOM 15 C SER 3 399 194.986 224.165 353.728 1.00172.80 ATOM 16 O SER 3 399 193.949 224.811 353.874 1.00172.12 ATOM 17 CB SER 3 399 193.963 222.427 355.251 1.00171.39 ATOM 18 OG SER 3 399 192.858 222.300 354.377 1.00171.03 ATOM 19 N PRO 3 400 195.958 224.595 352.886 1.00173.76 ATOM 20 CA PRO 3 400 195.915 225.919 352.261 1.00174.03 ATOM 21 C PRO 3 400 195.003 225.978 351.023 1.00175.12 ATOM 22 O PRO 3 400 195.475 225.715 349.927 1.00175.26 ATOM 23 CB PRO 3 400 197.394 226.154 351.912 1.00173.20 ATOM 24 CG PRO 3 400 197.914 224.771 351.572 1.00173.19 ATOM 25 CD PRO 3 400 197.151 223.829 352.483 1.00173.34 ATOM 26 N TYR 3 401 193.722 226.306 351.231 1.00176.03 ATOM 27 CA TYR 3 401 192.683 226.434 350.170 1.00176.73 ATOM 28 C TYR 3 401 191.997 227.809 350.190 1.00175.33 ATOM 29 O TYR 3 401 191.313 228.110 349.191 1.00175.42 ATOM 30 CB TYR 3 401 191.656 225.307 350.303 1.00178.26 ATOM 31 CG TYR 3 401 192.271 223.933 350.240 1.00180.15 ATOM 32 CD1 TYR 3 401 192.624 223.358 349.028 1.00180.86 ATOM 33 CD2 TYR 3 401 192.542 223.223 351.397 1.00181.16 ATOM 34 CE1 TYR 3 401 193.209 222.103 348.968 1.00181.36 ATOM 35 CE2 TYR 3 401 193.126 221.967 351.354 1.00181.34 ATOM 36 CZ TYR 3 401 193.461 221.404 350.138 1.00181.49 ATOM 37 OH TYR 3 401 194.036 220.167 350.136 1.00180.97 ATOM 38 N GLN 3 402 192.163 228.614 351.250 1.00173.42 ATOM 39 CA GLN 3 402 191.579 229.981 351.344 1.00172.04 ATOM 40 C GLN 3 402 192.325 230.930 350.394 1.00172.29 ATOM 41 O GLN 3 402 191.745 231.969 350.018 1.00172.44 ATOM 42 CB GLN 3 402 191.599 230.505 352.780 1.00170.92 ATOM 43 CG GLN 3 402 190.757 231.765 352.966 1.00170.42 ATOM 44 CD GLN 3 402 189.915 231.762 354.218 1.00169.74 ATOM 45 OE1 GLN 3 402 190.087 230.934 355.110 1.00169.36 ATOM 46 NE2 GLN 3 402 188.988 232.702 354.291 1.00168.95 ATOM 47 N GLN 3 403 193.580 230.604 350.069 1.00171.96 ATOM 48 CA GLN 3 403 194.364 231.212 348.956 1.00171.29 ATOM 49 C GLN 3 403 193.522 231.235 347.670 1.00171.26 ATOM 50 O GLN 3 403 193.350 232.339 347.120 1.00170.44 ATOM 51 CB GLN 3 403 195.706 230.494 348.759 1.00170.67 ATOM 52 CG GLN 3 403 195.632 228.969 348.714 1.00169.99 ATOM 53 CD GLN 3 403 196.987 228.313 348.601 1.00169.71 ATOM 54 OE1 GLN 3 403 198.010 228.866 349.000 1.00169.74 ATOM 55 NE2 GLN 3 403 197.002 227.106 348.059 1.00168.73 ATOM 56 N VAL 3 404 192.977 230.086 347.244 1.00171.66 ATOM 57 CA VAL 3 404 192.258 229.923 345.940 1.00171.49 ATOM 58 C VAL 3 404 190.802 230.386 346.104 1.00171.53 ATOM 59 O VAL 3 404 190.243 230.889 345.112 1.00171.28 ATOM 60 CB VAL 3 404 192.341 228.483 345.391 1.00170.90 ATOM 61 CG1 VAL 3 404 191.872 228.410 343.942 1.00170.93 ATOM 62 CG2 VAL 3 404 193.744 227.900 345.521 1.00170.61 ATOM 63 N ILE 3 405 190.217 230.220 347.299 1.00171.70 ATOM 64 CA ILE 3 405 188.899 230.803 347.710 1.00171.53 ATOM 65 C ILE 3 405 188.825 232.255 347.219 1.00171.28 ATOM 66 O ILE 3 405 187.843 232.600 346.531 1.00170.65 ATOM 67 CB ILE 3 405 188.716 230.710 349.242 1.00171.00 ATOM 68 CG1 ILE 3 405 188.443 229.274 349.705 1.00170.44 ATOM 69 CG2 ILE 3 405 187.671 231.698 349.755 1.00170.88 ATOM 70 CD1 ILE 3 405 188.126 228.934 351.061 0.00 30.00 ATOM 71 N GLU 3 406 189.829 233.062 347.580 1.00170.57 ATOM 72 CA GLU 3 406 189.959 234.496 347.204 1.00170.18 ATOM 73 C GLU 3 406 190.135 234.622 345.684 1.00170.67 ATOM 74 O GLU 3 406 189.456 235.486 345.092 1.00170.62 ATOM 75 CB GLU 3 406 191.130 235.135 347.956 1.00169.18 ATOM 76 CG GLU 3 406 191.385 236.588 347.590 1.00168.86 ATOM 77 CD GLU 3 406 192.463 236.822 346.544 1.00168.25 ATOM 78 OE1 GLU 3 406 193.626 236.455 346.805 1.00167.85 ATOM 79 OE2 GLU 3 406 192.138 237.369 345.471 1.00167.74 ATOM 80 N LYS 3 407 191.014 233.804 345.088 1.00170.48 ATOM 81 CA LYS 3 407 191.387 233.865 343.645 1.00169.78 ATOM 82 C LYS 3 407 190.144 233.713 342.758 1.00171.00 ATOM 83 O LYS 3 407 190.062 234.439 341.747 1.00169.60 ATOM 84 CB LYS 3 407 192.417 232.787 343.278 1.00167.60 ATOM 85 CG LYS 3 407 193.797 232.900 343.921 1.00165.90 ATOM 86 CD LYS 3 407 194.329 234.311 344.106 1.00164.95 ATOM 87 CE LYS 3 407 194.470 235.087 342.812 1.00164.06 ATOM 88 NZ LYS 3 407 194.454 236.550 343.049 1.00163.22 ATOM 89 N THR 3 408 189.218 232.820 343.125 1.00172.48 ATOM 90 CA THR 3 408 188.017 232.464 342.319 1.00173.00 ATOM 91 C THR 3 408 187.009 233.624 342.291 1.00173.67 ATOM 92 O THR 3 408 186.401 233.824 341.219 1.00173.59 ATOM 93 CB THR 3 408 187.362 231.172 342.826 1.00172.15 ATOM 94 OG1 THR 3 408 187.096 231.327 344.220 1.00171.74 ATOM 95 CG2 THR 3 408 188.212 229.941 342.596 1.00171.47 ATOM 96 N LYS 3 409 186.841 234.356 343.401 1.00173.33 ATOM 97 CA LYS 3 409 185.758 235.368 343.579 1.00172.66 ATOM 98 C LYS 3 409 186.288 236.794 343.396 1.00171.58 ATOM 99 O LYS 3 409 185.762 237.498 342.512 1.00171.25 ATOM 100 CB LYS 3 409 185.092 235.226 344.953 1.00172.72 ATOM 101 CG LYS 3 409 184.045 234.126 345.060 1.00172.69 ATOM 102 CD LYS 3 409 182.969 234.185 343.988 1.00172.47 ATOM 103 CE LYS 3 409 181.927 233.103 344.141 1.00172.04 ATOM 104 NZ LYS 3 409 182.457 231.772 343.758 1.00171.57 ATOM 105 N SER 3 410 187.287 237.197 344.189 1.00170.47 ATOM 106 CA SER 3 410 187.704 238.612 344.401 1.00169.92 ATOM 107 C SER 3 410 188.086 239.322 343.089 1.00169.19 ATOM 108 O SER 3 410 188.192 240.565 343.127 1.00168.46 ATOM 109 CB SER 3 410 188.817 238.702 345.418 1.00169.79 ATOM 110 OG SER 3 410 188.362 238.287 346.697 1.00169.13 ATOM 111 N LEU 3 411 188.284 238.588 341.983 1.00168.66 ATOM 112 CA LEU 3 411 188.557 239.153 340.630 1.00168.17 ATOM 113 C LEU 3 411 187.282 239.135 339.773 1.00167.51 ATOM 114 O LEU 3 411 186.821 240.230 339.393 1.00167.66 ATOM 115 CB LEU 3 411 189.688 238.359 339.964 1.00168.57 ATOM 116 CG LEU 3 411 191.095 238.657 340.487 1.00167.99 ATOM 117 CD1 LEU 3 411 191.432 237.791 341.692 1.00167.89 ATOM 118 CD2 LEU 3 411 192.136 238.465 339.394 1.00166.93 ATOM 119 N SER 3 412 186.740 237.946 339.482 1.00167.09 ATOM 120 CA SER 3 412 185.640 237.719 338.501 1.00166.97 ATOM 121 C SER 3 412 184.296 238.237 339.034 1.00166.68 ATOM 122 O SER 3 412 183.452 238.616 338.196 1.00166.84 ATOM 123 CB SER 3 412 185.548 236.265 338.107 1.00167.05 ATOM 124 OG SER 3 412 184.556 236.069 337.109 1.00166.64 ATOM 125 N PHE 3 413 184.088 238.245 340.357 1.00165.62 ATOM 126 CA PHE 3 413 182.870 238.799 341.009 1.00164.42 ATOM 127 C PHE 3 413 182.891 240.332 340.939 1.00163.74 ATOM 128 O PHE 3 413 181.818 240.935 340.740 1.00163.04 ATOM 129 CB PHE 3 413 182.736 238.334 342.461 1.00164.01 ATOM 130 CG PHE 3 413 181.404 238.676 343.078 1.00163.85 ATOM 131 CD1 PHE 3 413 180.258 238.004 342.685 1.00163.58 ATOM 132 CD2 PHE 3 413 181.286 239.688 344.022 1.00163.49 ATOM 133 CE1 PHE 3 413 179.027 238.323 343.235 1.00163.48 ATOM 134 CE2 PHE 3 413 180.051 240.005 344.572 1.00163.44 ATOM 135 CZ PHE 3 413 178.923 239.322 344.177 1.00163.41 ATOM 136 N ARG 3 414 184.071 240.937 341.113 1.00163.16 ATOM 137 CA ARG 3 414 184.302 242.400 340.960 1.00162.79 ATOM 138 C ARG 3 414 184.226 242.787 339.474 1.00164.29 ATOM 139 O ARG 3 414 183.937 243.967 339.192 1.00164.69 ATOM 140 CB ARG 3 414 185.649 242.790 341.577 1.00161.42 ATOM 141 CG ARG 3 414 185.884 244.291 341.665 1.00160.76 ATOM 142 CD ARG 3 414 187.065 244.634 342.551 1.00160.35 ATOM 143 NE ARG 3 414 187.426 246.044 342.461 1.00160.35 ATOM 144 CZ ARG 3 414 188.107 246.611 341.461 1.00160.82 ATOM 145 NH1 ARG 3 414 188.522 245.898 340.424 1.00160.50 ATOM 146 NH2 ARG 3 414 188.369 247.908 341.502 1.00161.16 ATOM 147 N SER 3 415 184.490 241.838 338.567 1.00164.70 ATOM 148 CA SER 3 415 184.367 241.995 337.091 1.00164.65 ATOM 149 C SER 3 415 182.898 241.909 336.645 1.00165.10 ATOM 150 O SER 3 415 182.592 242.442 335.559 1.00164.56 ATOM 151 CB SER 3 415 185.215 240.975 336.369 1.00163.55 ATOM 152 OG SER 3 415 185.307 241.279 334.985 1.00163.31 ATOM 153 N GLN 3 416 182.028 241.264 337.436 1.00166.17 ATOM 154 CA GLN 3 416 180.593 241.026 337.104 1.00167.28 ATOM 155 C GLN 3 416 179.796 242.333 337.240 1.00168.39 ATOM 156 O GLN 3 416 178.988 242.617 336.332 1.00167.97 ATOM 157 CB GLN 3 416 180.009 239.920 337.990 1.00166.73 ATOM 158 CG GLN 3 416 178.542 239.597 337.718 1.00166.74 ATOM 159 CD GLN 3 416 178.280 239.162 336.297 1.00167.05 ATOM 160 OE1 GLN 3 416 177.510 239.785 335.569 1.00167.12 ATOM 161 NE2 GLN 3 416 178.930 238.085 335.887 1.00167.18 ATOM 162 N MET 3 417 180.011 243.092 338.324 1.00168.19 ATOM 163 CA MET 3 417 179.312 244.382 338.602 1.00167.81 ATOM 164 C MET 3 417 179.792 245.485 337.645 1.00167.80 ATOM 165 O MET 3 417 179.124 246.538 337.593 1.00167.92 ATOM 166 CB MET 3 417 179.520 244.834 340.055 1.00167.15 ATOM 167 CG MET 3 417 180.935 245.298 340.389 1.00166.47 ATOM 168 SD MET 3 417 181.200 247.085 340.191 1.00165.95 ATOM 169 CE MET 3 417 180.217 247.734 341.542 1.00164.38 ATOM 170 N LEU 3 418 180.899 245.255 336.928 1.00167.38 ATOM 171 CA LEU 3 418 181.545 246.223 335.998 1.00166.90 ATOM 172 C LEU 3 418 180.612 246.561 334.820 1.00167.82 ATOM 173 O LEU 3 418 180.753 247.679 334.284 1.00167.18 ATOM 174 CB LEU 3 418 182.875 245.625 335.516 1.00164.97 ATOM 175 CG LEU 3 418 183.953 246.623 335.086 1.00163.29 ATOM 176 CD1 LEU 3 418 185.323 246.199 335.598 1.00162.11 ATOM 177 CD2 LEU 3 418 183.981 246.791 333.574 1.00163.37 ATOM 178 N ALA 3 419 179.690 245.658 334.446 1.00168.82 ATOM 179 CA ALA 3 419 178.848 245.752 333.225 1.00169.29 ATOM 180 C ALA 3 419 177.340 245.811 333.530 1.00170.22 ATOM 181 O ALA 3 419 176.570 245.832 332.547 1.00170.14 ATOM 182 CB ALA 3 419 179.163 244.587 332.319 1.00168.57 ATOM 183 N MET 3 420 176.914 245.863 334.803 1.00170.81 ATOM 184 CA MET 3 420 175.482 246.052 335.186 1.00171.20 ATOM 185 C MET 3 420 175.171 247.555 335.328 1.00171.77 ATOM 186 O MET 3 420 174.043 247.885 335.744 1.00171.99 ATOM 187 CB MET 3 420 175.141 245.290 336.476 1.00171.15 ATOM 188 CG MET 3 420 173.638 245.122 336.730 1.00170.90 ATOM 189 SD MET 3 420 172.966 246.105 338.100 1.00170.54 ATOM 190 CE MET 3 420 173.221 244.988 339.478 1.00169.62 ATOM 191 N ASN 3 421 176.104 248.436 334.936 1.00172.26 ATOM 192 CA ASN 3 421 175.906 249.911 334.832 1.00172.49 ATOM 193 C ASN 3 421 175.202 250.265 333.508 1.00173.39 ATOM 194 O ASN 3 421 175.325 251.430 333.073 1.00173.74 ATOM 195 CB ASN 3 421 177.235 250.666 334.986 1.00171.63 ATOM 196 CG ASN 3 421 178.256 250.368 333.905 1.00170.64 ATOM 197 OD1 ASN 3 421 178.101 249.432 333.123 1.00170.27 ATOM 198 ND2 ASN 3 421 179.317 251.158 333.860 1.00170.08 ATOM 199 N ILE 3 422 174.470 249.314 332.908 1.00173.00 ATOM 200 CA ILE 3 422 173.858 249.408 331.549 1.00172.13 ATOM 201 C ILE 3 422 172.336 249.515 331.712 1.00171.00 ATOM 202 O ILE 3 422 171.757 250.593 331.574 1.00169.82 ATOM 203 CB ILE 3 422 174.276 248.192 330.692 1.00171.58 ATOM 204 CG1 ILE 3 422 175.785 248.180 330.428 1.00170.75 ATOM 205 CG2 ILE 3 422 173.485 248.125 329.393 1.00171.19 ATOM 206 CD1 ILE 3 422 176.389 247.066 329.727 0.00 30.00 TER