HEADER MEMBRANE PROTEIN 31-DEC-69 6WHW TITLE GluN1b-GluN2B NMDA receptor in complex with GluN2B antagonist SDZ TITLE 2 220-040, class 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Ionotropic glutamate receptor , NMDA receptor GluN1b; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO C 606 REMARK 465 PHE C 607 REMARK 465 GLY C 608 REMARK 465 ARG C 609 REMARK 465 PHE C 610 REMARK 465 LYS C 611 REMARK 465 VAL C 612 REMARK 465 ASN C 613 REMARK 465 SER C 614 REMARK 465 GLN C 615 REMARK 465 SER C 616 REMARK 465 GLU C 617 REMARK 465 SER C 618 REMARK 465 THR C 619 REMARK 465 ASP C 620 REMARK 465 ALA C 621 REMARK 465 LEU C 622 DBREF 6WHW C 1 959 PDB 6WHW 6WHW 1 959 SEQRES 1 C 111 ARG SER THR LEU ASP SER PHE MET GLN PRO PHE GLN SER SEQRES 2 C 111 THR LEU TRP LEU LEU VAL GLY LEU SER VAL HIS VAL VAL SEQRES 3 C 111 ALA VAL MET LEU TYR LEU LEU ASP ARG PHE SER PRO PHE SEQRES 4 C 111 GLY ARG PHE LYS VAL ASN SER GLN SER GLU SER THR ASP SEQRES 5 C 111 ALA LEU THR LEU SER SER ALA MET TRP PHE SER TRP GLY SEQRES 6 C 111 VAL LEU LEU ASN SER GLY ILE GLY GLU GLY ALA PRO ARG SEQRES 7 C 111 SER PHE SER ALA ARG ILE LEU GLY MET VAL TRP ALA GLY SEQRES 8 C 111 PHE ALA MET ILE ILE VAL ALA SER TYR THR ALA ASN LEU SEQRES 9 C 111 ALA ALA PHE LEU VAL LEU ASP SEQRES 1 C 37 PRO ALA THR LEU THR CYS GLU ASN MET ALA GLY VAL PHE SEQRES 2 C 37 MET LEU VAL ALA GLY GLY ILE VAL ALA GLY ILE PHE LEU SEQRES 3 C 37 ILE PHE ILE GLU ILE ALA TYR LYS ARG HIS LYS ATOM 1 N PRO C 826 185.409 167.514 146.310 1.00 94.13 ATOM 2 CA PRO C 826 184.000 167.215 146.043 1.00 94.13 ATOM 3 C PRO C 826 183.773 165.974 145.199 1.00 94.13 ATOM 4 O PRO C 826 182.706 165.829 144.599 1.00 94.13 ATOM 5 CB PRO C 826 183.511 168.474 145.327 1.00 94.13 ATOM 6 CG PRO C 826 184.472 169.523 145.725 1.00 94.13 ATOM 7 CD PRO C 826 185.780 168.831 145.780 1.00 94.13 ATOM 8 N ALA C 827 184.757 165.077 145.141 1.00 96.38 ATOM 9 CA ALA C 827 184.558 163.715 144.638 1.00 96.38 ATOM 10 C ALA C 827 184.193 163.697 143.151 1.00 96.38 ATOM 11 O ALA C 827 183.050 163.472 142.765 1.00 96.38 ATOM 12 CB ALA C 827 183.494 162.978 145.457 1.00 96.38 ATOM 13 N THR C 828 185.204 163.977 142.333 1.00 88.78 ATOM 14 CA THR C 828 185.074 163.870 140.885 1.00 88.78 ATOM 15 C THR C 828 184.355 162.591 140.476 1.00 88.78 ATOM 16 O THR C 828 184.438 161.559 141.146 1.00 88.78 ATOM 17 CB THR C 828 186.450 163.895 140.222 1.00 88.78 ATOM 18 OG1 THR C 828 186.294 163.940 138.800 1.00 88.78 ATOM 19 CG2 THR C 828 187.240 162.654 140.586 1.00 88.78 ATOM 20 N LEU C 829 183.641 162.670 139.356 1.00 93.89 ATOM 21 CA LEU C 829 182.934 161.527 138.808 1.00 93.89 ATOM 22 C LEU C 829 183.935 160.472 138.375 1.00 93.89 ATOM 23 O LEU C 829 185.149 160.652 138.470 1.00 93.89 ATOM 24 CB LEU C 829 182.071 161.938 137.625 1.00 93.89 ATOM 25 CG LEU C 829 181.043 163.023 137.885 1.00 93.89 ATOM 26 CD1 LEU C 829 180.252 163.263 136.635 1.00 93.89 ATOM 27 CD2 LEU C 829 180.143 162.587 138.999 1.00 93.89 ATOM 28 N THR C 830 183.428 159.362 137.867 1.00109.54 ATOM 29 CA THR C 830 184.320 158.264 137.566 1.00109.54 ATOM 30 C THR C 830 183.677 157.366 136.525 1.00109.54 ATOM 31 O THR C 830 182.651 157.706 135.930 1.00109.54 ATOM 32 CB THR C 830 184.675 157.484 138.833 1.00109.54 ATOM 33 OG1 THR C 830 185.503 156.372 138.473 1.00109.54 ATOM 34 CG2 THR C 830 183.422 156.986 139.503 1.00109.54 ATOM 35 N CYS C 831 184.292 156.212 136.311 1.00117.27 ATOM 36 CA CYS C 831 183.982 155.398 135.155 1.00117.27 ATOM 37 C CYS C 831 182.742 154.555 135.398 1.00117.27 ATOM 38 O CYS C 831 182.189 153.978 134.457 1.00117.27 ATOM 39 CB CYS C 831 185.187 154.510 134.871 1.00 30.00 ATOM 40 SG CYS C 831 185.605 154.435 133.167 1.00 30.00 ATOM 41 N GLU C 832 182.321 154.453 136.656 1.00124.54 ATOM 42 CA GLU C 832 181.332 153.484 137.099 1.00124.54 ATOM 43 C GLU C 832 179.935 154.065 137.205 1.00124.54 ATOM 44 O GLU C 832 178.999 153.326 137.521 1.00124.54 ATOM 45 CB GLU C 832 181.740 152.922 138.460 1.00124.54 ATOM 46 CG GLU C 832 181.699 153.960 139.554 1.00124.54 ATOM 47 CD GLU C 832 182.276 153.465 140.861 1.00124.54 ATOM 48 OE1 GLU C 832 182.710 152.297 140.915 1.00124.54 ATOM 49 OE2 GLU C 832 182.312 154.253 141.829 1.00124.54 ATOM 50 N ASN C 833 179.773 155.360 136.991 1.00112.51 ATOM 51 CA ASN C 833 178.455 155.966 137.003 1.00112.51 ATOM 52 C ASN C 833 178.098 156.650 135.703 1.00112.51 ATOM 53 O ASN C 833 176.907 156.746 135.391 1.00112.51 ATOM 54 CB ASN C 833 178.344 156.967 138.152 1.00112.51 ATOM 55 CG ASN C 833 179.637 157.657 138.418 1.00112.51 ATOM 56 OD1 ASN C 833 180.640 157.370 137.771 1.00112.51 ATOM 57 ND2 ASN C 833 179.642 158.554 139.390 1.00112.51 ATOM 58 N MET C 834 179.072 157.087 134.918 1.00107.86 ATOM 59 CA MET C 834 178.825 157.516 133.553 1.00107.86 ATOM 60 C MET C 834 178.601 156.339 132.616 1.00107.86 ATOM 61 O MET C 834 178.477 156.539 131.407 1.00107.86 ATOM 62 CB MET C 834 179.995 158.357 133.051 1.00107.86 ATOM 63 CG MET C 834 180.225 159.621 133.848 1.00107.86 ATOM 64 SD MET C 834 178.880 160.797 133.718 1.00107.86 ATOM 65 CE MET C 834 179.147 161.370 132.050 1.00107.86 ATOM 66 N ALA C 835 178.534 155.122 133.148 1.00112.47 ATOM 67 CA ALA C 835 178.412 153.932 132.322 1.00112.47 ATOM 68 C ALA C 835 177.134 153.900 131.506 1.00112.47 ATOM 69 O ALA C 835 177.042 153.107 130.566 1.00112.47 ATOM 70 CB ALA C 835 178.483 152.679 133.192 1.00112.47 ATOM 71 N GLY C 836 176.150 154.729 131.839 1.00108.03 ATOM 72 CA GLY C 836 174.915 154.716 131.080 1.00108.03 ATOM 73 C GLY C 836 175.096 155.222 129.664 1.00108.03 ATOM 74 O GLY C 836 174.690 154.563 128.705 1.00108.03 ATOM 75 N VAL C 837 175.716 156.388 129.511 1.00104.31 ATOM 76 CA VAL C 837 175.803 156.983 128.187 1.00104.31 ATOM 77 C VAL C 837 176.632 156.122 127.252 1.00104.31 ATOM 78 O VAL C 837 176.297 155.982 126.072 1.00104.31 ATOM 79 CB VAL C 837 176.368 158.403 128.288 1.00104.31 ATOM 80 CG1 VAL C 837 175.374 159.300 128.970 1.00104.31 ATOM 81 CG2 VAL C 837 177.658 158.391 129.050 1.00104.31 ATOM 82 N PHE C 838 177.713 155.524 127.743 1.00112.34 ATOM 83 CA PHE C 838 178.492 154.653 126.878 1.00112.34 ATOM 84 C PHE C 838 177.696 153.417 126.488 1.00112.34 ATOM 85 O PHE C 838 177.808 152.934 125.355 1.00112.34 ATOM 86 CB PHE C 838 179.798 154.277 127.562 1.00112.34 ATOM 87 CG PHE C 838 180.630 155.461 127.954 1.00112.34 ATOM 88 CD1 PHE C 838 180.428 156.093 129.163 1.00112.34 ATOM 89 CD2 PHE C 838 181.612 155.942 127.112 1.00112.34 ATOM 90 CE1 PHE C 838 181.188 157.177 129.524 1.00112.34 ATOM 91 CE2 PHE C 838 182.376 157.027 127.471 1.00112.34 ATOM 92 CZ PHE C 838 182.162 157.644 128.677 1.00112.34 ATOM 93 N MET C 839 176.870 152.908 127.398 1.00117.20 ATOM 94 CA MET C 839 175.961 151.836 127.025 1.00117.20 ATOM 95 C MET C 839 175.032 152.279 125.905 1.00117.20 ATOM 96 O MET C 839 174.793 151.523 124.958 1.00117.20 ATOM 97 CB MET C 839 175.159 151.377 128.239 1.00 30.00 ATOM 98 N LEU C 840 174.510 153.501 125.983 1.00114.62 ATOM 99 CA LEU C 840 173.556 153.909 124.963 1.00114.62 ATOM 100 C LEU C 840 174.251 154.128 123.632 1.00114.62 ATOM 101 O LEU C 840 173.681 153.826 122.583 1.00114.62 ATOM 102 CB LEU C 840 172.821 155.181 125.391 1.00 30.00 ATOM 103 CG LEU C 840 171.833 155.766 124.378 1.00 30.00 ATOM 104 CD1 LEU C 840 170.699 154.789 124.110 1.00 30.00 ATOM 105 CD2 LEU C 840 171.292 157.102 124.863 1.00 30.00 ATOM 106 N VAL C 841 175.493 154.606 123.626 1.00115.04 ATOM 107 CA VAL C 841 176.141 154.766 122.334 1.00115.04 ATOM 108 C VAL C 841 176.521 153.417 121.747 1.00115.04 ATOM 109 O VAL C 841 176.394 153.221 120.533 1.00115.04 ATOM 110 CB VAL C 841 177.358 155.701 122.415 1.00115.04 ATOM 111 CG1 VAL C 841 178.337 155.215 123.427 1.00115.04 ATOM 112 CG2 VAL C 841 178.025 155.820 121.062 1.00115.04 ATOM 113 N ALA C 842 176.942 152.460 122.573 1.00117.09 ATOM 114 CA ALA C 842 177.141 151.112 122.057 1.00117.09 ATOM 115 C ALA C 842 175.861 150.572 121.432 1.00117.09 ATOM 116 O ALA C 842 175.855 150.164 120.263 1.00117.09 ATOM 117 CB ALA C 842 177.627 150.189 123.172 1.00117.09 ATOM 118 N GLY C 843 174.765 150.574 122.192 1.00121.97 ATOM 119 CA GLY C 843 173.486 150.143 121.659 1.00121.97 ATOM 120 C GLY C 843 173.095 150.851 120.385 1.00121.97 ATOM 121 O GLY C 843 172.467 150.243 119.515 1.00121.97 ATOM 122 N GLY C 844 173.461 152.122 120.251 1.00123.76 ATOM 123 CA GLY C 844 173.274 152.790 118.980 1.00123.76 ATOM 124 C GLY C 844 174.090 152.151 117.877 1.00123.76 ATOM 125 O GLY C 844 173.601 151.965 116.761 1.00123.76 ATOM 126 N ILE C 845 175.347 151.811 118.172 1.00127.03 ATOM 127 CA ILE C 845 176.148 151.096 117.183 1.00127.03 ATOM 128 C ILE C 845 175.419 149.845 116.731 1.00127.03 ATOM 129 O ILE C 845 175.299 149.578 115.529 1.00127.03 ATOM 130 CB ILE C 845 177.539 150.738 117.731 1.00127.03 ATOM 131 CG1 ILE C 845 178.155 151.907 118.480 1.00127.03 ATOM 132 CG2 ILE C 845 178.446 150.323 116.599 1.00127.03 ATOM 133 CD1 ILE C 845 178.305 153.142 117.651 1.00127.03 ATOM 134 N VAL C 846 174.915 149.066 117.687 1.00129.82 ATOM 135 CA VAL C 846 174.228 147.823 117.350 1.00129.82 ATOM 136 C VAL C 846 173.077 148.090 116.393 1.00129.82 ATOM 137 O VAL C 846 173.098 147.646 115.240 1.00129.82 ATOM 138 CB VAL C 846 173.746 147.113 118.627 1.00129.82 ATOM 139 CG1 VAL C 846 172.799 145.987 118.278 1.00129.82 ATOM 140 CG2 VAL C 846 174.930 146.562 119.394 1.00129.82 ATOM 141 N ALA C 847 172.078 148.854 116.844 1.00131.72 ATOM 142 CA ALA C 847 170.865 149.049 116.058 1.00131.72 ATOM 143 C ALA C 847 171.175 149.467 114.632 1.00131.72 ATOM 144 O ALA C 847 170.417 149.137 113.712 1.00131.72 ATOM 145 CB ALA C 847 169.968 150.089 116.726 1.00131.72 ATOM 146 N GLY C 848 172.286 150.172 114.430 1.00133.61 ATOM 147 CA GLY C 848 172.666 150.559 113.087 1.00133.61 ATOM 148 C GLY C 848 172.903 149.367 112.184 1.00133.61 ATOM 149 O GLY C 848 172.458 149.351 111.033 1.00133.61 ATOM 150 N ILE C 849 173.607 148.351 112.687 1.00135.22 ATOM 151 CA ILE C 849 173.896 147.207 111.839 1.00135.22 ATOM 152 C ILE C 849 172.623 146.476 111.455 1.00135.22 ATOM 153 O ILE C 849 172.621 145.712 110.486 1.00135.22 ATOM 154 CB ILE C 849 174.892 146.254 112.517 1.00135.22 ATOM 155 CG1 ILE C 849 174.164 145.311 113.471 1.00135.22 ATOM 156 CG2 ILE C 849 175.954 147.043 113.253 1.00135.22 ATOM 157 CD1 ILE C 849 175.043 144.227 114.035 1.00135.22 ATOM 158 N PHE C 850 171.531 146.687 112.187 1.00135.82 ATOM 159 CA PHE C 850 170.252 146.150 111.748 1.00135.82 ATOM 160 C PHE C 850 169.601 147.072 110.732 1.00135.82 ATOM 161 O PHE C 850 169.391 146.689 109.577 1.00135.82 ATOM 162 CB PHE C 850 169.320 145.940 112.940 1.00135.82 ATOM 163 CG PHE C 850 169.767 144.864 113.877 1.00135.82 ATOM 164 CD1 PHE C 850 170.763 143.979 113.511 1.00135.82 ATOM 165 CD2 PHE C 850 169.190 144.738 115.127 1.00135.82 ATOM 166 CE1 PHE C 850 171.179 142.992 114.374 1.00135.82 ATOM 167 CE2 PHE C 850 169.602 143.752 115.995 1.00135.82 ATOM 168 CZ PHE C 850 170.597 142.876 115.617 1.00135.82 ATOM 169 N LEU C 851 169.305 148.301 111.136 1.00130.92 ATOM 170 CA LEU C 851 168.552 149.214 110.290 1.00130.92 ATOM 171 C LEU C 851 169.305 149.623 109.038 1.00130.92 ATOM 172 O LEU C 851 168.754 150.369 108.226 1.00130.92 ATOM 173 CB LEU C 851 168.140 150.450 111.089 1.00130.92 ATOM 174 CG LEU C 851 169.241 151.270 111.756 1.00130.92 ATOM 175 CD1 LEU C 851 169.835 152.300 110.818 1.00130.92 ATOM 176 CD2 LEU C 851 168.705 151.927 113.012 1.00130.92 ATOM 177 N ILE C 852 170.542 149.171 108.856 1.00134.82 ATOM 178 CA ILE C 852 171.196 149.422 107.581 1.00134.82 ATOM 179 C ILE C 852 170.562 148.593 106.475 1.00134.82 ATOM 180 O ILE C 852 170.147 149.134 105.446 1.00134.82 ATOM 181 CB ILE C 852 172.711 149.173 107.684 1.00134.82 ATOM 182 CG1 ILE C 852 173.375 149.451 106.336 1.00134.82 ATOM 183 CG2 ILE C 852 173.022 147.779 108.201 1.00134.82 ATOM 184 CD1 ILE C 852 174.874 149.494 106.396 1.00134.82 ATOM 185 N PHE C 853 170.467 147.278 106.664 1.00137.37 ATOM 186 CA PHE C 853 169.960 146.410 105.615 1.00137.37 ATOM 187 C PHE C 853 168.556 146.778 105.190 1.00137.37 ATOM 188 O PHE C 853 168.256 146.735 103.994 1.00137.37 ATOM 189 CB PHE C 853 169.998 144.959 106.077 1.00137.37 ATOM 190 CG PHE C 853 171.375 144.461 106.332 1.00137.37 ATOM 191 CD1 PHE C 853 172.436 144.944 105.592 1.00137.37 ATOM 192 CD2 PHE C 853 171.618 143.525 107.316 1.00137.37 ATOM 193 CE1 PHE C 853 173.713 144.498 105.820 1.00137.37 ATOM 194 CE2 PHE C 853 172.895 143.072 107.549 1.00137.37 ATOM 195 CZ PHE C 853 173.946 143.561 106.800 1.00137.37 ATOM 196 N ILE C 854 167.703 147.158 106.139 1.00131.76 ATOM 197 CA ILE C 854 166.348 147.568 105.801 1.00131.76 ATOM 198 C ILE C 854 166.360 148.647 104.728 1.00131.76 ATOM 199 O ILE C 854 165.469 148.690 103.870 1.00131.76 ATOM 200 CB ILE C 854 165.626 148.016 107.081 1.00131.76 ATOM 201 CG1 ILE C 854 165.517 146.832 108.043 1.00131.76 ATOM 202 CG2 ILE C 854 164.260 148.583 106.762 1.00131.76 ATOM 203 CD1 ILE C 854 164.731 147.125 109.291 1.00131.76 ATOM 204 N GLU C 855 167.376 149.510 104.728 1.00133.23 ATOM 205 CA GLU C 855 167.529 150.444 103.620 1.00133.23 ATOM 206 C GLU C 855 167.717 149.701 102.308 1.00133.23 ATOM 207 O GLU C 855 166.934 149.884 101.368 1.00133.23 ATOM 208 CB GLU C 855 168.707 151.385 103.875 1.00133.23 ATOM 209 CG GLU C 855 169.217 152.090 102.624 1.00133.23 ATOM 210 CD GLU C 855 170.288 153.122 102.918 1.00133.23 ATOM 211 OE1 GLU C 855 170.860 153.091 104.025 1.00133.23 ATOM 212 OE2 GLU C 855 170.548 153.975 102.046 1.00133.23 ATOM 213 N ILE C 856 168.741 148.846 102.235 1.00134.86 ATOM 214 CA ILE C 856 169.001 148.077 101.023 1.00134.86 ATOM 215 C ILE C 856 167.744 147.362 100.555 1.00134.86 ATOM 216 O ILE C 856 167.479 147.278 99.351 1.00134.86 ATOM 217 CB ILE C 856 170.150 147.085 101.269 1.00134.86 ATOM 218 CG1 ILE C 856 171.310 147.783 101.971 1.00134.86 ATOM 219 CG2 ILE C 856 170.607 146.457 99.964 1.00134.86 ATOM 220 CD1 ILE C 856 172.344 146.831 102.496 1.00134.86 ATOM 221 N ALA C 857 166.948 146.847 101.490 1.00138.51 ATOM 222 CA ALA C 857 165.685 146.229 101.115 1.00138.51 ATOM 223 C ALA C 857 164.758 147.243 100.466 1.00138.51 ATOM 224 O ALA C 857 164.306 147.043 99.333 1.00138.51 ATOM 225 CB ALA C 857 165.024 145.602 102.340 1.00138.51 ATOM 226 N TYR C 858 164.485 148.348 101.154 1.00143.42 ATOM 227 CA TYR C 858 163.574 149.352 100.628 1.00143.42 ATOM 228 C TYR C 858 164.055 149.951 99.315 1.00143.42 ATOM 229 O TYR C 858 163.275 150.629 98.640 1.00143.42 ATOM 230 CB TYR C 858 163.369 150.456 101.663 1.00143.42 ATOM 231 CG TYR C 858 162.224 151.393 101.355 1.00143.42 ATOM 232 CD1 TYR C 858 160.912 151.024 101.607 1.00143.42 ATOM 233 CD2 TYR C 858 162.458 152.654 100.822 1.00143.42 ATOM 234 CE1 TYR C 858 159.864 151.882 101.332 1.00143.42 ATOM 235 CE2 TYR C 858 161.417 153.518 100.544 1.00143.42 ATOM 236 CZ TYR C 858 160.123 153.127 100.800 1.00143.42 ATOM 237 OH TYR C 858 159.087 153.986 100.523 1.00143.42 ATOM 238 N LYS C 859 165.305 149.704 98.929 1.00139.51 ATOM 239 CA LYS C 859 165.820 150.192 97.658 1.00139.51 ATOM 240 C LYS C 859 165.246 149.451 96.460 1.00139.51 ATOM 241 O LYS C 859 165.376 149.937 95.332 1.00139.51 ATOM 242 CB LYS C 859 167.345 150.083 97.631 1.00 30.00 ATOM 243 N ARG C 860 164.625 148.296 96.670 1.00143.31 ATOM 244 CA ARG C 860 164.074 147.507 95.579 1.00143.31 ATOM 245 C ARG C 860 162.569 147.669 95.434 1.00143.31 ATOM 246 O ARG C 860 162.071 147.823 94.314 1.00143.31 ATOM 247 CB ARG C 860 164.415 146.029 95.777 1.00 30.00 ATOM 248 N HIS C 861 161.836 147.652 96.544 1.00147.06 ATOM 249 CA HIS C 861 160.383 147.709 96.533 1.00147.06 ATOM 250 C HIS C 861 159.853 149.136 96.557 1.00147.06 ATOM 251 O HIS C 861 158.723 149.361 97.005 1.00147.06 ATOM 252 CB HIS C 861 159.816 146.928 97.720 1.00 30.00 ATOM 253 N LYS C 862 160.642 150.099 96.094 1.00148.90 ATOM 254 CA LYS C 862 160.211 151.489 96.056 1.00148.90 ATOM 255 C LYS C 862 160.844 152.221 94.877 1.00148.90 ATOM 256 O LYS C 862 161.275 153.367 95.002 1.00148.90 ATOM 257 CB LYS C 862 160.562 152.196 97.366 1.00 30.00 TER