HEADER LIGASE 31-DEC-69 6YKT TITLE Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound TITLE 2 11e COMPND MOL_ID: 1; COMPND 2 MOLECULE: Leucine--tRNA ligase; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 EC: 6.1.1.4; COMPND 6 FRAGMENT: Leucyl-tRNA ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.32 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 829 REMARK 465 GLY A 830 REMARK 465 LYS A 831 REMARK 465 ILE A 832 REMARK 465 THR A 833 REMARK 465 VAL A 834 REMARK 465 ALA A 835 REMARK 465 ALA A 836 REMARK 465 ASP A 837 REMARK 465 ALA A 838 REMARK 465 SER A 839 REMARK 465 LYS A 840 REMARK 465 GLU A 851 REMARK 465 GLY A 852 REMARK 465 ALA A 853 REMARK 465 VAL A 854 REMARK 465 LYS A 855 REMARK 465 PHE A 856 REMARK 465 MET A 857 REMARK 465 GLU A 858 REMARK 465 GLY A 859 REMARK 465 LYS A 860 REMARK 465 PRO A 861 REMARK 465 ALA A 862 REMARK 465 LYS A 863 REMARK 465 LYS A 864 DBREF 6YKT A 1 876 UNP A0A5K1KQ A0A5K1KQ39_ 3 878 SEQRES 1 A 63 LYS SER GLU ILE GLU VAL MET VAL GLN VAL ASN GLY LYS SEQRES 2 A 63 LEU ARG GLY LYS ILE THR VAL ALA ALA ASP ALA SER LYS SEQRES 3 A 63 ALA ASP LEU GLU ALA ALA ALA LEU ALA ASN GLU GLY ALA SEQRES 4 A 63 VAL LYS PHE MET GLU GLY LYS PRO ALA LYS LYS ILE ILE SEQRES 5 A 63 VAL VAL PRO GLY ARG LEU VAL ASN ILE VAL VAL ATOM 1 N LYS A 814 -35.859 -7.586 -64.099 1.00 94.19 ATOM 2 CA LYS A 814 -37.008 -8.467 -63.975 1.00 96.21 ATOM 3 C LYS A 814 -37.798 -8.477 -65.279 1.00105.79 ATOM 4 O LYS A 814 -37.647 -7.597 -66.131 1.00105.89 ATOM 5 CB LYS A 814 -37.890 -8.038 -62.798 1.00 89.45 ATOM 6 CG LYS A 814 -37.184 -8.141 -61.447 1.00 82.63 ATOM 7 CD LYS A 814 -37.976 -7.470 -60.333 1.00 78.50 ATOM 8 N SER A 815 -38.638 -9.502 -65.427 1.00111.31 ATOM 9 CA SER A 815 -39.341 -9.734 -66.681 1.00114.16 ATOM 10 C SER A 815 -40.237 -8.550 -67.041 1.00127.14 ATOM 11 O SER A 815 -40.575 -7.705 -66.207 1.00133.03 ATOM 12 CB SER A 815 -40.163 -11.022 -66.604 1.00104.12 ATOM 13 OG SER A 815 -40.918 -11.085 -65.407 1.00 98.81 ATOM 14 N GLU A 816 -40.616 -8.498 -68.315 1.00129.96 ATOM 15 CA GLU A 816 -41.385 -7.393 -68.867 1.00133.41 ATOM 16 C GLU A 816 -42.233 -7.927 -70.009 1.00132.14 ATOM 17 O GLU A 816 -41.772 -8.766 -70.787 1.00131.05 ATOM 18 CB GLU A 816 -40.462 -6.271 -69.365 1.00136.99 ATOM 19 CG GLU A 816 -41.118 -5.265 -70.304 1.00141.12 ATOM 20 CD GLU A 816 -40.189 -4.813 -71.420 1.00144.27 ATOM 21 OE1 GLU A 816 -39.070 -5.359 -71.522 1.00144.20 ATOM 22 OE2 GLU A 816 -40.579 -3.916 -72.198 1.00146.67 ATOM 23 N ILE A 817 -43.471 -7.447 -70.105 1.00132.04 ATOM 24 CA ILE A 817 -44.323 -7.826 -71.226 1.00127.29 ATOM 25 C ILE A 817 -45.379 -6.751 -71.464 1.00122.21 ATOM 26 O ILE A 817 -46.290 -6.555 -70.652 1.00119.85 ATOM 27 CB ILE A 817 -44.938 -9.222 -70.996 1.00122.37 ATOM 28 CG1 ILE A 817 -45.859 -9.611 -72.149 1.00116.29 ATOM 29 CG2 ILE A 817 -45.628 -9.323 -69.632 1.00122.96 ATOM 30 CD1 ILE A 817 -46.136 -11.078 -72.181 1.00110.75 ATOM 31 N GLU A 818 -45.244 -6.031 -72.578 1.00118.50 ATOM 32 CA GLU A 818 -46.142 -4.929 -72.898 1.00113.65 ATOM 33 C GLU A 818 -47.440 -5.476 -73.479 1.00117.92 ATOM 34 O GLU A 818 -47.425 -6.222 -74.465 1.00118.74 ATOM 35 CB GLU A 818 -45.472 -3.957 -73.869 1.00105.19 ATOM 36 CG GLU A 818 -44.659 -4.619 -74.970 1.00100.66 ATOM 37 N VAL A 819 -48.561 -5.113 -72.862 1.00118.24 ATOM 38 CA VAL A 819 -49.885 -5.518 -73.312 1.00118.63 ATOM 39 C VAL A 819 -50.681 -4.268 -73.660 1.00114.49 ATOM 40 O VAL A 819 -50.615 -3.259 -72.949 1.00116.34 ATOM 41 CB VAL A 819 -50.618 -6.357 -72.245 1.00119.07 ATOM 42 N MET A 820 -51.427 -4.334 -74.759 1.00106.40 ATOM 43 CA MET A 820 -52.246 -3.209 -75.182 1.00103.03 ATOM 44 C MET A 820 -53.542 -3.169 -74.386 1.00105.48 ATOM 45 O MET A 820 -54.160 -4.204 -74.123 1.00 99.43 ATOM 46 CB MET A 820 -52.553 -3.297 -76.677 1.00 93.86 ATOM 47 N VAL A 821 -53.945 -1.963 -73.997 1.00111.31 ATOM 48 CA VAL A 821 -55.198 -1.729 -73.288 1.00110.22 ATOM 49 C VAL A 821 -56.219 -1.198 -74.285 1.00108.85 ATOM 50 O VAL A 821 -55.908 -0.310 -75.088 1.00112.05 ATOM 51 CB VAL A 821 -54.998 -0.750 -72.117 1.00104.83 ATOM 52 CG1 VAL A 821 -54.366 -1.465 -70.932 1.00100.14 ATOM 53 CG2 VAL A 821 -54.131 0.434 -72.548 1.00 99.42 ATOM 54 N GLN A 822 -57.435 -1.745 -74.244 1.00105.51 ATOM 55 CA GLN A 822 -58.495 -1.323 -75.154 1.00104.74 ATOM 56 C GLN A 822 -59.849 -1.563 -74.502 1.00106.88 ATOM 57 O GLN A 822 -60.102 -2.652 -73.981 1.00109.67 ATOM 58 CB GLN A 822 -58.413 -2.071 -76.490 1.00 98.19 ATOM 59 N VAL A 823 -60.709 -0.548 -74.535 1.00104.89 ATOM 60 CA VAL A 823 -62.055 -0.622 -73.977 1.00111.66 ATOM 61 C VAL A 823 -63.050 -0.486 -75.121 1.00121.41 ATOM 62 O VAL A 823 -62.977 0.470 -75.904 1.00129.46 ATOM 63 CB VAL A 823 -62.291 0.462 -72.911 1.00112.16 ATOM 64 N ASN A 824 -63.975 -1.443 -75.216 1.00119.52 ATOM 65 CA ASN A 824 -64.958 -1.528 -76.296 1.00118.34 ATOM 66 C ASN A 824 -64.303 -1.692 -77.666 1.00123.16 ATOM 67 O ASN A 824 -64.923 -1.396 -78.693 1.00121.64 ATOM 68 CB ASN A 824 -65.896 -0.314 -76.299 1.00114.01 ATOM 69 N GLY A 825 -63.054 -2.160 -77.702 1.00131.07 ATOM 70 CA GLY A 825 -62.365 -2.453 -78.942 1.00137.91 ATOM 71 C GLY A 825 -61.370 -1.412 -79.411 1.00146.38 ATOM 72 O GLY A 825 -60.693 -1.644 -80.420 1.00145.29 ATOM 73 N LYS A 826 -61.252 -0.281 -78.717 1.00152.90 ATOM 74 CA LYS A 826 -60.376 0.811 -79.124 1.00152.42 ATOM 75 C LYS A 826 -59.313 1.038 -78.059 1.00141.73 ATOM 76 O LYS A 826 -59.623 1.078 -76.864 1.00146.02 ATOM 77 CB LYS A 826 -61.175 2.098 -79.359 1.00156.73 ATOM 78 N LEU A 827 -58.066 1.194 -78.494 1.00127.07 ATOM 79 CA LEU A 827 -56.952 1.435 -77.582 1.00107.04 ATOM 80 C LEU A 827 -57.076 2.790 -76.894 1.00110.88 ATOM 81 O LEU A 827 -56.890 3.834 -77.519 1.00118.18 ATOM 82 CB LEU A 827 -55.620 1.352 -78.330 1.00 96.54 ATOM 83 N ALA A 840 -56.536 -12.250 -64.536 1.00123.96 ATOM 84 CA ALA A 840 -56.480 -11.811 -63.145 1.00125.71 ATOM 85 C ALA A 840 -55.267 -10.916 -62.887 1.00124.22 ATOM 86 O ALA A 840 -55.402 -9.826 -62.330 1.00124.58 ATOM 87 CB ALA A 840 -56.459 -13.012 -62.212 1.00124.86 ATOM 88 N ASP A 841 -54.084 -11.385 -63.294 1.00118.83 ATOM 89 CA ASP A 841 -52.865 -10.604 -63.104 1.00111.59 ATOM 90 C ASP A 841 -52.930 -9.291 -63.880 1.00111.27 ATOM 91 O ASP A 841 -52.797 -8.204 -63.305 1.00107.46 ATOM 92 CB ASP A 841 -51.645 -11.426 -63.526 1.00106.31 ATOM 93 N LEU A 842 -53.142 -9.375 -65.196 1.00110.10 ATOM 94 CA LEU A 842 -53.205 -8.179 -66.029 1.00103.25 ATOM 95 C LEU A 842 -54.546 -7.462 -65.935 1.00105.92 ATOM 96 O LEU A 842 -54.620 -6.270 -66.257 1.00105.73 ATOM 97 CB LEU A 842 -52.911 -8.533 -67.490 1.00 94.31 ATOM 98 CG LEU A 842 -51.492 -9.009 -67.812 1.00 92.49 ATOM 99 CD1 LEU A 842 -51.358 -10.524 -67.658 1.00 94.16 ATOM 100 CD2 LEU A 842 -51.074 -8.558 -69.204 1.00 87.57 ATOM 101 N GLU A 843 -55.605 -8.156 -65.508 1.00105.14 ATOM 102 CA GLU A 843 -56.891 -7.496 -65.321 1.00105.78 ATOM 103 C GLU A 843 -56.810 -6.414 -64.251 1.00122.50 ATOM 104 O GLU A 843 -57.514 -5.400 -64.337 1.00125.29 ATOM 105 CB GLU A 843 -57.961 -8.527 -64.960 1.00 96.93 ATOM 106 N ALA A 844 -55.953 -6.604 -63.244 1.00131.20 ATOM 107 CA ALA A 844 -55.806 -5.609 -62.187 1.00137.19 ATOM 108 C ALA A 844 -54.957 -4.427 -62.640 1.00137.81 ATOM 109 O ALA A 844 -55.224 -3.284 -62.252 1.00146.39 ATOM 110 CB ALA A 844 -55.201 -6.254 -60.940 1.00138.19 ATOM 111 N ALA A 845 -53.932 -4.680 -63.458 1.00125.94 ATOM 112 CA ALA A 845 -53.064 -3.596 -63.905 1.00112.34 ATOM 113 C ALA A 845 -53.759 -2.716 -64.938 1.00111.27 ATOM 114 O ALA A 845 -53.688 -1.484 -64.859 1.00107.36 ATOM 115 CB ALA A 845 -51.761 -4.164 -64.466 1.00100.93 ATOM 116 N ALA A 846 -54.435 -3.330 -65.916 1.00112.85 ATOM 117 CA ALA A 846 -55.136 -2.550 -66.932 1.00114.89 ATOM 118 C ALA A 846 -56.271 -1.738 -66.327 1.00120.29 ATOM 119 O ALA A 846 -56.566 -0.634 -66.801 1.00124.00 ATOM 120 CB ALA A 846 -55.669 -3.467 -68.032 1.00113.05 ATOM 121 N LEU A 847 -56.923 -2.267 -65.287 1.00122.12 ATOM 122 CA LEU A 847 -57.934 -1.498 -64.575 1.00125.70 ATOM 123 C LEU A 847 -57.325 -0.342 -63.795 1.00135.96 ATOM 124 O LEU A 847 -58.035 0.620 -63.484 1.00140.26 ATOM 125 CB LEU A 847 -58.728 -2.405 -63.633 1.00119.95 ATOM 126 N ALA A 848 -56.030 -0.413 -63.476 1.00139.24 ATOM 127 CA ALA A 848 -55.328 0.688 -62.826 1.00141.36 ATOM 128 C ALA A 848 -55.006 1.829 -63.783 1.00142.52 ATOM 129 O ALA A 848 -54.451 2.844 -63.348 1.00141.91 ATOM 130 CB ALA A 848 -54.039 0.180 -62.171 1.00136.70 ATOM 131 N ASN A 849 -55.340 1.687 -65.063 1.00141.77 ATOM 132 CA ASN A 849 -55.118 2.735 -66.052 1.00136.71 ATOM 133 C ASN A 849 -56.358 3.619 -66.171 1.00138.35 ATOM 134 O ASN A 849 -57.149 3.478 -67.105 1.00138.07 ATOM 135 CB ASN A 849 -54.762 2.119 -67.409 1.00128.38 ATOM 136 CG ASN A 849 -54.177 3.130 -68.378 1.00120.25 ATOM 137 OD1 ASN A 849 -54.572 4.297 -68.397 1.00123.32 ATOM 138 ND2 ASN A 849 -53.228 2.682 -69.192 1.00106.07 ATOM 139 N ILE A 864 -64.658 -8.022 -69.149 1.00109.42 ATOM 140 CA ILE A 864 -63.201 -7.969 -69.178 1.00112.56 ATOM 141 C ILE A 864 -62.604 -9.350 -69.444 1.00123.95 ATOM 142 O ILE A 864 -62.435 -10.149 -68.523 1.00130.34 ATOM 143 CB ILE A 864 -62.640 -7.385 -67.868 1.00105.46 ATOM 144 N ILE A 865 -62.283 -9.623 -70.707 1.00124.26 ATOM 145 CA ILE A 865 -61.638 -10.866 -71.116 1.00125.97 ATOM 146 C ILE A 865 -60.194 -10.561 -71.494 1.00127.23 ATOM 147 O ILE A 865 -59.911 -9.540 -72.132 1.00130.10 ATOM 148 CB ILE A 865 -62.383 -11.535 -72.288 1.00124.99 ATOM 149 N VAL A 866 -59.281 -11.445 -71.099 1.00123.77 ATOM 150 CA VAL A 866 -57.855 -11.273 -71.353 1.00122.02 ATOM 151 C VAL A 866 -57.379 -12.397 -72.264 1.00115.98 ATOM 152 O VAL A 866 -57.623 -13.578 -71.986 1.00126.40 ATOM 153 CB VAL A 866 -57.036 -11.241 -70.046 1.00120.82 ATOM 154 CG1 VAL A 866 -57.222 -9.914 -69.331 1.00122.12 ATOM 155 CG2 VAL A 866 -57.423 -12.392 -69.127 1.00121.74 ATOM 156 N VAL A 867 -56.715 -12.029 -73.355 1.00103.78 ATOM 157 CA VAL A 867 -56.004 -12.981 -74.202 1.00 90.64 ATOM 158 C VAL A 867 -54.583 -13.106 -73.656 1.00 97.25 ATOM 159 O VAL A 867 -53.857 -12.100 -73.626 1.00 90.33 ATOM 160 CB VAL A 867 -55.997 -12.544 -75.672 1.00 76.61 ATOM 161 CG1 VAL A 867 -54.977 -13.350 -76.463 1.00 72.75 ATOM 162 CG2 VAL A 867 -57.388 -12.712 -76.283 1.00 63.92 ATOM 163 N PRO A 868 -54.154 -14.301 -73.221 1.00105.17 ATOM 164 CA PRO A 868 -52.919 -14.418 -72.429 1.00107.37 ATOM 165 C PRO A 868 -51.684 -13.765 -73.037 1.00106.99 ATOM 166 O PRO A 868 -51.147 -14.238 -74.044 1.00111.08 ATOM 167 CB PRO A 868 -52.732 -15.938 -72.314 1.00106.81 ATOM 168 CG PRO A 868 -54.107 -16.495 -72.418 1.00106.32 ATOM 169 CD PRO A 868 -54.837 -15.599 -73.381 1.00108.75 ATOM 170 N GLY A 869 -51.234 -12.667 -72.425 1.00 98.92 ATOM 171 CA GLY A 869 -49.911 -12.130 -72.645 1.00 90.42 ATOM 172 C GLY A 869 -49.824 -10.934 -73.573 1.00 94.25 ATOM 173 O GLY A 869 -48.852 -10.176 -73.485 1.00 96.74 ATOM 174 N ARG A 870 -50.797 -10.733 -74.450 1.00 96.86 ATOM 175 CA ARG A 870 -50.709 -9.684 -75.461 0.61 95.46 ATOM 176 C ARG A 870 -51.754 -8.593 -75.302 1.00 95.24 ATOM 177 O ARG A 870 -51.443 -7.412 -75.473 1.00103.11 ATOM 178 CB ARG A 870 -50.833 -10.301 -76.866 0.61 93.80 ATOM 179 CG ARG A 870 -50.862 -11.829 -76.881 0.61 90.26 ATOM 180 CD ARG A 870 -50.789 -12.382 -78.301 0.61 89.63 ATOM 181 NE ARG A 870 -52.094 -12.437 -78.957 0.61 90.30 ATOM 182 CZ ARG A 870 -52.263 -12.587 -80.268 0.61 87.61 ATOM 183 NH1 ARG A 870 -53.484 -12.633 -80.786 0.61 87.18 ATOM 184 NH2 ARG A 870 -51.207 -12.679 -81.064 0.61 81.72 ATOM 185 N LEU A 871 -52.993 -8.952 -74.983 1.00 85.84 ATOM 186 CA LEU A 871 -54.068 -7.978 -75.013 1.00 85.74 ATOM 187 C LEU A 871 -54.986 -8.157 -73.814 1.00 98.08 ATOM 188 O LEU A 871 -55.177 -9.268 -73.313 1.00 91.67 ATOM 189 CB LEU A 871 -54.865 -8.096 -76.320 1.00 76.36 ATOM 190 CG LEU A 871 -55.720 -6.900 -76.740 1.00 79.59 ATOM 191 CD1 LEU A 871 -55.532 -6.621 -78.222 1.00 85.36 ATOM 192 CD2 LEU A 871 -57.189 -7.144 -76.421 1.00 81.18 ATOM 193 N VAL A 872 -55.546 -7.037 -73.362 1.00115.51 ATOM 194 CA VAL A 872 -56.589 -7.004 -72.344 1.00120.75 ATOM 195 C VAL A 872 -57.697 -6.084 -72.845 1.00123.01 ATOM 196 O VAL A 872 -57.428 -4.962 -73.289 1.00125.65 ATOM 197 CB VAL A 872 -56.041 -6.539 -70.977 1.00119.73 ATOM 198 CG1 VAL A 872 -55.175 -5.295 -71.133 1.00118.46 ATOM 199 CG2 VAL A 872 -57.175 -6.292 -69.992 1.00120.84 ATOM 200 N ASN A 873 -58.935 -6.571 -72.805 1.00118.75 ATOM 201 CA ASN A 873 -60.093 -5.851 -73.321 1.00114.64 ATOM 202 C ASN A 873 -61.091 -5.661 -72.188 1.00114.22 ATOM 203 O ASN A 873 -61.493 -6.637 -71.547 1.00114.07 ATOM 204 CB ASN A 873 -60.730 -6.622 -74.485 1.00113.53 ATOM 205 CG ASN A 873 -61.709 -5.781 -75.286 1.00114.89 ATOM 206 OD1 ASN A 873 -62.819 -5.502 -74.837 1.00116.82 ATOM 207 ND2 ASN A 873 -61.306 -5.391 -76.492 1.00114.75 ATOM 208 N ILE A 874 -61.484 -4.414 -71.937 1.00114.90 ATOM 209 CA ILE A 874 -62.354 -4.072 -70.814 1.00113.12 ATOM 210 C ILE A 874 -63.762 -3.842 -71.351 1.00113.87 ATOM 211 O ILE A 874 -64.034 -2.826 -72.001 1.00111.40 ATOM 212 CB ILE A 874 -61.839 -2.846 -70.047 1.00107.59 ATOM 213 CG1 ILE A 874 -60.340 -2.993 -69.764 1.00 99.22 ATOM 214 CG2 ILE A 874 -62.616 -2.673 -68.748 1.00107.24 ATOM 215 CD1 ILE A 874 -59.868 -2.294 -68.506 1.00 91.97 ATOM 216 N VAL A 875 -64.663 -4.785 -71.065 1.00115.50 ATOM 217 CA VAL A 875 -66.039 -4.748 -71.550 1.00112.45 ATOM 218 C VAL A 875 -66.780 -3.573 -70.926 1.00118.72 ATOM 219 O VAL A 875 -67.317 -3.679 -69.816 1.00119.54 ATOM 220 CB VAL A 875 -66.767 -6.073 -71.256 1.00104.26 ATOM 221 N VAL A 876 -66.820 -2.451 -71.639 1.00123.45 ATOM 222 CA VAL A 876 -67.487 -1.246 -71.164 1.00127.69 ATOM 223 C VAL A 876 -68.819 -1.081 -71.891 1.00137.56 ATOM 224 O VAL A 876 -69.624 -0.202 -71.580 1.00142.07 ATOM 225 CB VAL A 876 -66.592 -0.002 -71.354 1.00122.36 ATOM 226 CG1 VAL A 876 -66.627 0.467 -72.802 1.00118.33 ATOM 227 CG2 VAL A 876 -67.000 1.114 -70.398 1.00122.66 ATOM 228 OXT VAL A 876 -69.124 -1.831 -72.818 1.00140.16 TER