HEADER LIGASE 31-DEC-69 6YKV TITLE Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound TITLE 2 11g COMPND MOL_ID: 1; COMPND 2 MOLECULE: Leucine--tRNA ligase; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 EC: 6.1.1.4; COMPND 6 FRAGMENT: Leucyl-tRNA ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.43 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 829 REMARK 465 GLY A 830 REMARK 465 LYS A 831 REMARK 465 ILE A 832 REMARK 465 THR A 833 REMARK 465 VAL A 834 REMARK 465 ALA A 835 REMARK 465 ALA A 836 REMARK 465 ASP A 837 REMARK 465 ALA A 838 REMARK 465 SER A 839 REMARK 465 LYS A 840 REMARK 465 GLU A 851 REMARK 465 GLY A 852 REMARK 465 ALA A 853 REMARK 465 VAL A 854 REMARK 465 LYS A 855 REMARK 465 PHE A 856 REMARK 465 MET A 857 REMARK 465 GLU A 858 REMARK 465 GLY A 859 REMARK 465 LYS A 860 REMARK 465 PRO A 861 REMARK 465 ALA A 862 REMARK 465 LYS A 863 REMARK 465 LYS A 864 DBREF 6YKV A 1 876 UNP A0A5K1KQ A0A5K1KQ39_ 3 878 SEQRES 1 A 63 LYS SER GLU ILE GLU VAL MET VAL GLN VAL ASN GLY LYS SEQRES 2 A 63 LEU ARG GLY LYS ILE THR VAL ALA ALA ASP ALA SER LYS SEQRES 3 A 63 ALA ASP LEU GLU ALA ALA ALA LEU ALA ASN GLU GLY ALA SEQRES 4 A 63 VAL LYS PHE MET GLU GLY LYS PRO ALA LYS LYS ILE ILE SEQRES 5 A 63 VAL VAL PRO GLY ARG LEU VAL ASN ILE VAL VAL ATOM 1 N LYS A 814 -35.804 -7.152 -64.412 1.00 89.67 ATOM 2 CA LYS A 814 -37.037 -7.921 -64.358 1.00 91.69 ATOM 3 C LYS A 814 -37.696 -7.941 -65.731 1.00 93.89 ATOM 4 O LYS A 814 -37.611 -6.976 -66.495 1.00 85.02 ATOM 5 CB LYS A 814 -38.001 -7.342 -63.320 1.00 93.02 ATOM 6 N SER A 815 -38.357 -9.054 -66.038 1.00101.06 ATOM 7 CA SER A 815 -38.932 -9.293 -67.357 1.00108.53 ATOM 8 C SER A 815 -40.452 -9.236 -67.264 1.00113.61 ATOM 9 O SER A 815 -41.075 -10.098 -66.634 1.00119.03 ATOM 10 CB SER A 815 -38.470 -10.638 -67.913 1.00109.57 ATOM 11 N GLU A 816 -41.042 -8.222 -67.890 1.00113.25 ATOM 12 CA GLU A 816 -42.480 -8.115 -68.077 1.00109.24 ATOM 13 C GLU A 816 -42.765 -7.949 -69.566 1.00114.14 ATOM 14 O GLU A 816 -41.859 -7.728 -70.373 1.00110.26 ATOM 15 CB GLU A 816 -43.065 -6.946 -67.269 1.00102.43 ATOM 16 CG GLU A 816 -44.546 -7.093 -66.935 1.00 99.42 ATOM 17 CD GLU A 816 -45.400 -6.009 -67.564 1.00103.13 ATOM 18 OE1 GLU A 816 -44.892 -4.883 -67.755 1.00102.82 ATOM 19 OE2 GLU A 816 -46.579 -6.283 -67.871 1.00104.04 ATOM 20 N ILE A 817 -44.039 -8.064 -69.931 1.00121.11 ATOM 21 CA ILE A 817 -44.465 -8.069 -71.326 1.00125.69 ATOM 22 C ILE A 817 -45.171 -6.758 -71.643 1.00124.49 ATOM 23 O ILE A 817 -45.921 -6.227 -70.816 1.00124.30 ATOM 24 CB ILE A 817 -45.377 -9.275 -71.621 1.00128.75 ATOM 25 CG1 ILE A 817 -44.746 -10.556 -71.074 1.00128.49 ATOM 26 CG2 ILE A 817 -45.628 -9.408 -73.115 1.00130.46 ATOM 27 CD1 ILE A 817 -45.629 -11.772 -71.199 1.00128.98 ATOM 28 N GLU A 818 -44.925 -6.238 -72.844 1.00122.30 ATOM 29 CA GLU A 818 -45.576 -5.019 -73.315 1.00117.27 ATOM 30 C GLU A 818 -46.993 -5.358 -73.763 1.00125.91 ATOM 31 O GLU A 818 -47.186 -6.037 -74.777 1.00129.01 ATOM 32 CB GLU A 818 -44.774 -4.393 -74.452 1.00107.76 ATOM 33 CG GLU A 818 -45.426 -3.170 -75.079 1.00102.83 ATOM 34 N VAL A 819 -47.984 -4.885 -73.013 1.00127.31 ATOM 35 CA VAL A 819 -49.389 -5.165 -73.284 1.00129.68 ATOM 36 C VAL A 819 -50.082 -3.871 -73.686 1.00131.02 ATOM 37 O VAL A 819 -49.815 -2.807 -73.115 1.00134.27 ATOM 38 CB VAL A 819 -50.085 -5.802 -72.065 1.00129.18 ATOM 39 N MET A 820 -50.969 -3.967 -74.671 1.00129.49 ATOM 40 CA MET A 820 -51.766 -2.839 -75.128 1.00126.79 ATOM 41 C MET A 820 -53.198 -2.975 -74.625 1.00126.50 ATOM 42 O MET A 820 -53.698 -4.082 -74.413 1.00126.46 ATOM 43 CB MET A 820 -51.755 -2.743 -76.655 1.00125.77 ATOM 44 N VAL A 821 -53.856 -1.833 -74.439 1.00126.83 ATOM 45 CA VAL A 821 -55.213 -1.790 -73.913 1.00126.07 ATOM 46 C VAL A 821 -56.140 -1.204 -74.968 1.00126.17 ATOM 47 O VAL A 821 -55.716 -0.440 -75.842 1.00130.10 ATOM 48 CB VAL A 821 -55.294 -0.973 -72.604 1.00123.48 ATOM 49 N GLN A 822 -57.417 -1.575 -74.886 1.00121.33 ATOM 50 CA GLN A 822 -58.434 -1.027 -75.772 1.00123.76 ATOM 51 C GLN A 822 -59.760 -0.967 -75.028 1.00128.26 ATOM 52 O GLN A 822 -60.100 -1.883 -74.275 1.00128.42 ATOM 53 CB GLN A 822 -58.575 -1.851 -77.060 1.00123.41 ATOM 54 CG GLN A 822 -59.150 -3.248 -76.877 1.00123.31 ATOM 55 CD GLN A 822 -59.336 -3.975 -78.195 1.00120.31 ATOM 56 OE1 GLN A 822 -58.738 -3.611 -79.208 1.00118.43 ATOM 57 NE2 GLN A 822 -60.172 -5.007 -78.190 1.00118.64 ATOM 58 N VAL A 823 -60.498 0.119 -75.238 1.00130.00 ATOM 59 CA VAL A 823 -61.778 0.352 -74.579 1.00133.27 ATOM 60 C VAL A 823 -62.862 0.291 -75.646 1.00134.62 ATOM 61 O VAL A 823 -62.935 1.165 -76.520 1.00137.99 ATOM 62 CB VAL A 823 -61.804 1.693 -73.835 1.00135.33 ATOM 63 N ASN A 824 -63.702 -0.744 -75.575 1.00131.65 ATOM 64 CA ASN A 824 -64.800 -0.947 -76.522 1.00126.59 ATOM 65 C ASN A 824 -64.289 -1.049 -77.958 1.00132.42 ATOM 66 O ASN A 824 -64.919 -0.561 -78.898 1.00130.24 ATOM 67 CB ASN A 824 -65.854 0.156 -76.395 1.00123.64 ATOM 68 N GLY A 825 -63.132 -1.686 -78.129 1.00138.23 ATOM 69 CA GLY A 825 -62.596 -1.934 -79.453 1.00144.13 ATOM 70 C GLY A 825 -61.410 -1.072 -79.834 1.00146.00 ATOM 71 O GLY A 825 -60.406 -1.581 -80.340 1.00144.10 ATOM 72 N LYS A 826 -61.514 0.235 -79.604 1.00147.27 ATOM 73 CA LYS A 826 -60.448 1.158 -79.973 1.00140.32 ATOM 74 C LYS A 826 -59.377 1.189 -78.889 1.00139.91 ATOM 75 O LYS A 826 -59.689 1.263 -77.696 1.00140.19 ATOM 76 CB LYS A 826 -61.012 2.560 -80.203 1.00131.82 ATOM 77 CG LYS A 826 -61.991 2.651 -81.363 1.00129.09 ATOM 78 N LEU A 827 -58.116 1.135 -79.308 1.00136.03 ATOM 79 CA LEU A 827 -56.992 1.138 -78.376 1.00127.33 ATOM 80 C LEU A 827 -56.853 2.483 -77.673 1.00128.56 ATOM 81 O LEU A 827 -56.931 3.537 -78.304 1.00134.83 ATOM 82 CB LEU A 827 -55.691 0.790 -79.104 1.00121.39 ATOM 83 N ALA A 840 -56.337 -11.276 -64.422 1.00131.61 ATOM 84 CA ALA A 840 -56.071 -11.113 -62.998 1.00134.91 ATOM 85 C ALA A 840 -54.980 -10.074 -62.760 1.00140.93 ATOM 86 O ALA A 840 -55.266 -8.938 -62.379 1.00139.91 ATOM 87 CB ALA A 840 -55.682 -12.446 -62.377 1.00132.63 ATOM 88 N ASP A 841 -53.726 -10.473 -62.987 1.00146.22 ATOM 89 CA ASP A 841 -52.611 -9.549 -62.800 1.00148.28 ATOM 90 C ASP A 841 -52.604 -8.465 -63.871 1.00146.43 ATOM 91 O ASP A 841 -52.289 -7.303 -63.584 1.00151.91 ATOM 92 CB ASP A 841 -51.289 -10.318 -62.797 1.00146.76 ATOM 93 N LEU A 842 -52.950 -8.823 -65.112 1.00136.84 ATOM 94 CA LEU A 842 -53.042 -7.843 -66.187 1.00123.96 ATOM 95 C LEU A 842 -54.331 -7.030 -66.135 1.00121.31 ATOM 96 O LEU A 842 -54.356 -5.904 -66.643 1.00123.40 ATOM 97 CB LEU A 842 -52.931 -8.540 -67.547 1.00118.98 ATOM 98 N GLU A 843 -55.398 -7.575 -65.544 1.00118.21 ATOM 99 CA GLU A 843 -56.645 -6.829 -65.417 1.00114.72 ATOM 100 C GLU A 843 -56.562 -5.767 -64.329 1.00129.39 ATOM 101 O GLU A 843 -57.190 -4.710 -64.454 1.00133.37 ATOM 102 CB GLU A 843 -57.806 -7.787 -65.131 1.00104.34 ATOM 103 CG GLU A 843 -59.185 -7.130 -65.123 1.00 97.05 ATOM 104 N ALA A 844 -55.800 -6.026 -63.262 1.00138.68 ATOM 105 CA ALA A 844 -55.644 -5.030 -62.208 1.00144.36 ATOM 106 C ALA A 844 -54.759 -3.874 -62.654 1.00146.09 ATOM 107 O ALA A 844 -54.925 -2.748 -62.174 1.00151.26 ATOM 108 CB ALA A 844 -55.072 -5.678 -60.948 1.00143.13 ATOM 109 N ALA A 845 -53.815 -4.129 -63.560 1.00139.47 ATOM 110 CA ALA A 845 -52.971 -3.053 -64.068 1.00129.98 ATOM 111 C ALA A 845 -53.732 -2.190 -65.065 1.00124.52 ATOM 112 O ALA A 845 -53.704 -0.956 -64.984 1.00126.01 ATOM 113 CB ALA A 845 -51.704 -3.631 -64.701 1.00124.68 ATOM 114 N ALA A 846 -54.426 -2.824 -66.013 1.00118.05 ATOM 115 CA ALA A 846 -55.226 -2.089 -66.984 1.00113.59 ATOM 116 C ALA A 846 -56.466 -1.456 -66.367 1.00120.75 ATOM 117 O ALA A 846 -57.105 -0.625 -67.020 1.00124.00 ATOM 118 CB ALA A 846 -55.629 -3.008 -68.137 1.00110.86 ATOM 119 N LEU A 847 -56.830 -1.837 -65.140 1.00123.99 ATOM 120 CA LEU A 847 -57.884 -1.129 -64.423 1.00127.76 ATOM 121 C LEU A 847 -57.349 0.123 -63.743 1.00132.80 ATOM 122 O LEU A 847 -58.086 1.101 -63.580 1.00130.44 ATOM 123 CB LEU A 847 -58.543 -2.049 -63.395 1.00126.10 ATOM 124 N ALA A 848 -56.078 0.108 -63.339 1.00137.45 ATOM 125 CA ALA A 848 -55.377 1.299 -62.882 1.00141.16 ATOM 126 C ALA A 848 -54.822 2.124 -64.035 1.00146.76 ATOM 127 O ALA A 848 -53.852 2.869 -63.846 1.00145.55 ATOM 128 CB ALA A 848 -54.250 0.912 -61.921 1.00134.48 ATOM 129 N ASN A 849 -55.417 1.994 -65.218 1.00151.14 ATOM 130 CA ASN A 849 -54.969 2.683 -66.421 1.00150.86 ATOM 131 C ASN A 849 -55.000 4.197 -66.238 1.00154.54 ATOM 132 O ASN A 849 -55.975 4.749 -65.729 1.00158.62 ATOM 133 CB ASN A 849 -55.842 2.282 -67.612 1.00149.00 ATOM 134 CG ASN A 849 -55.115 2.392 -68.937 1.00144.89 ATOM 135 OD1 ASN A 849 -55.630 1.975 -69.974 1.00145.47 ATOM 136 ND2 ASN A 849 -53.907 2.941 -68.907 1.00140.70 ATOM 137 N ILE A 864 -64.546 -7.732 -70.115 1.00121.59 ATOM 138 CA ILE A 864 -63.382 -7.556 -69.256 1.00121.40 ATOM 139 C ILE A 864 -62.435 -8.743 -69.391 1.00130.84 ATOM 140 O ILE A 864 -61.669 -9.044 -68.476 1.00131.47 ATOM 141 CB ILE A 864 -63.799 -7.359 -67.789 1.00120.02 ATOM 142 N ILE A 865 -62.490 -9.415 -70.541 1.00139.40 ATOM 143 CA ILE A 865 -61.648 -10.578 -70.799 1.00144.97 ATOM 144 C ILE A 865 -60.275 -10.115 -71.265 1.00146.47 ATOM 145 O ILE A 865 -60.070 -8.928 -71.547 1.00148.74 ATOM 146 CB ILE A 865 -62.296 -11.517 -71.832 1.00147.95 ATOM 147 N VAL A 866 -59.327 -11.045 -71.355 1.00145.54 ATOM 148 CA VAL A 866 -57.953 -10.723 -71.732 1.00141.11 ATOM 149 C VAL A 866 -57.358 -11.904 -72.487 1.00141.42 ATOM 150 O VAL A 866 -57.444 -13.050 -72.034 1.00146.37 ATOM 151 CB VAL A 866 -57.094 -10.365 -70.500 1.00135.07 ATOM 152 CG1 VAL A 866 -57.325 -11.363 -69.372 1.00133.40 ATOM 153 CG2 VAL A 866 -55.619 -10.311 -70.870 1.00132.88 ATOM 154 N VAL A 867 -56.771 -11.624 -73.643 1.00136.05 ATOM 155 CA VAL A 867 -56.007 -12.635 -74.378 1.00127.50 ATOM 156 C VAL A 867 -54.607 -12.718 -73.775 1.00136.74 ATOM 157 O VAL A 867 -53.951 -11.677 -73.609 1.00135.63 ATOM 158 CB VAL A 867 -55.953 -12.294 -75.865 1.00108.10 ATOM 159 CG1 VAL A 867 -54.859 -13.091 -76.562 1.00100.18 ATOM 160 CG2 VAL A 867 -57.305 -12.571 -76.514 1.00 99.82 ATOM 161 N PRO A 868 -54.125 -13.918 -73.424 1.00141.79 ATOM 162 CA PRO A 868 -52.884 -14.028 -72.641 1.00140.82 ATOM 163 C PRO A 868 -51.656 -13.400 -73.285 1.00135.96 ATOM 164 O PRO A 868 -51.180 -13.862 -74.327 1.00141.93 ATOM 165 CB PRO A 868 -52.704 -15.545 -72.493 1.00144.34 ATOM 166 CG PRO A 868 -54.077 -16.105 -72.628 1.00147.46 ATOM 167 CD PRO A 868 -54.773 -15.226 -73.623 1.00147.70 ATOM 168 N GLY A 869 -51.137 -12.338 -72.662 1.00128.34 ATOM 169 CA GLY A 869 -49.824 -11.809 -72.951 1.00119.97 ATOM 170 C GLY A 869 -49.792 -10.605 -73.874 1.00118.95 ATOM 171 O GLY A 869 -48.884 -9.774 -73.755 1.00114.88 ATOM 172 N ARG A 870 -50.751 -10.489 -74.792 1.00121.87 ATOM 173 CA ARG A 870 -50.694 -9.481 -75.842 1.00124.91 ATOM 174 C ARG A 870 -51.689 -8.348 -75.625 1.00131.19 ATOM 175 O ARG A 870 -51.284 -7.192 -75.468 1.00132.29 ATOM 176 CB ARG A 870 -50.923 -10.143 -77.209 1.00124.74 ATOM 177 N LEU A 871 -52.986 -8.643 -75.618 1.00133.21 ATOM 178 CA LEU A 871 -54.020 -7.622 -75.558 1.00133.36 ATOM 179 C LEU A 871 -54.781 -7.697 -74.241 1.00139.21 ATOM 180 O LEU A 871 -54.855 -8.751 -73.603 1.00135.88 ATOM 181 CB LEU A 871 -55.014 -7.761 -76.721 1.00127.23 ATOM 182 CG LEU A 871 -54.535 -7.561 -78.164 1.00120.59 ATOM 183 CD1 LEU A 871 -53.587 -6.372 -78.270 1.00117.74 ATOM 184 CD2 LEU A 871 -53.899 -8.825 -78.733 1.00117.73 ATOM 185 N VAL A 872 -55.343 -6.558 -73.842 1.00145.94 ATOM 186 CA VAL A 872 -56.305 -6.482 -72.748 1.00144.07 ATOM 187 C VAL A 872 -57.390 -5.494 -73.157 1.00150.38 ATOM 188 O VAL A 872 -57.090 -4.402 -73.651 1.00152.17 ATOM 189 CB VAL A 872 -55.648 -6.077 -71.409 1.00132.46 ATOM 190 CG1 VAL A 872 -54.910 -4.748 -71.527 1.00129.24 ATOM 191 CG2 VAL A 872 -56.687 -6.021 -70.295 1.00129.61 ATOM 192 N ASN A 873 -58.650 -5.887 -72.985 1.00152.19 ATOM 193 CA ASN A 873 -59.790 -5.087 -73.414 1.00152.81 ATOM 194 C ASN A 873 -60.661 -4.758 -72.212 1.00148.32 ATOM 195 O ASN A 873 -61.031 -5.653 -71.444 1.00150.69 ATOM 196 CB ASN A 873 -60.609 -5.821 -74.481 1.00155.86 ATOM 197 N ILE A 874 -60.985 -3.479 -72.053 1.00140.78 ATOM 198 CA ILE A 874 -61.824 -3.003 -70.960 1.00129.97 ATOM 199 C ILE A 874 -63.200 -2.702 -71.549 1.00126.71 ATOM 200 O ILE A 874 -63.438 -1.622 -72.099 1.00119.87 ATOM 201 CB ILE A 874 -61.213 -1.784 -70.262 1.00124.47 ATOM 202 CG1 ILE A 874 -60.552 -0.848 -71.279 1.00125.18 ATOM 203 CG2 ILE A 874 -60.200 -2.224 -69.213 1.00115.04 ATOM 204 CD1 ILE A 874 -59.880 0.361 -70.658 1.00124.23 ATOM 205 N VAL A 875 -64.114 -3.665 -71.432 1.00125.47 ATOM 206 CA VAL A 875 -65.463 -3.530 -71.971 1.00128.12 ATOM 207 C VAL A 875 -66.203 -2.432 -71.220 1.00138.21 ATOM 208 O VAL A 875 -66.996 -2.709 -70.314 1.00139.24 ATOM 209 CB VAL A 875 -66.229 -4.864 -71.895 1.00121.71 ATOM 210 N VAL A 876 -65.948 -1.182 -71.593 1.00144.54 ATOM 211 CA VAL A 876 -66.580 -0.041 -70.944 1.00149.11 ATOM 212 C VAL A 876 -67.981 0.171 -71.510 1.00153.49 ATOM 213 O VAL A 876 -68.905 0.548 -70.789 1.00156.13 ATOM 214 CB VAL A 876 -65.718 1.232 -71.094 1.00150.56 ATOM 215 CG1 VAL A 876 -65.509 1.572 -72.564 1.00152.12 ATOM 216 CG2 VAL A 876 -66.347 2.400 -70.348 1.00153.11 ATOM 217 OXT VAL A 876 -68.230 -0.043 -72.697 1.00154.37 TER