HEADER LIGASE 31-DEC-69 6YKW TITLE Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound TITLE 2 11h COMPND MOL_ID: 1; COMPND 2 MOLECULE: Leucine--tRNA ligase; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 EC: 6.1.1.4; COMPND 6 FRAGMENT: Leucyl-tRNA ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.46 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 829 REMARK 465 GLY A 830 REMARK 465 LYS A 831 REMARK 465 ILE A 832 REMARK 465 THR A 833 REMARK 465 VAL A 834 REMARK 465 ALA A 835 REMARK 465 ALA A 836 REMARK 465 ASP A 837 REMARK 465 ALA A 838 REMARK 465 SER A 839 REMARK 465 LYS A 840 REMARK 465 GLU A 851 REMARK 465 GLY A 852 REMARK 465 ALA A 853 REMARK 465 VAL A 854 REMARK 465 LYS A 855 REMARK 465 PHE A 856 REMARK 465 MET A 857 REMARK 465 GLU A 858 REMARK 465 GLY A 859 REMARK 465 LYS A 860 REMARK 465 PRO A 861 REMARK 465 ALA A 862 REMARK 465 LYS A 863 REMARK 465 LYS A 864 DBREF 6YKW A 1 876 UNP A0A5K1KQ A0A5K1KQ39_ 3 878 SEQRES 1 A 63 LYS SER GLU ILE GLU VAL MET VAL GLN VAL ASN GLY LYS SEQRES 2 A 63 LEU ARG GLY LYS ILE THR VAL ALA ALA ASP ALA SER LYS SEQRES 3 A 63 ALA ASP LEU GLU ALA ALA ALA LEU ALA ASN GLU GLY ALA SEQRES 4 A 63 VAL LYS PHE MET GLU GLY LYS PRO ALA LYS LYS ILE ILE SEQRES 5 A 63 VAL VAL PRO GLY ARG LEU VAL ASN ILE VAL VAL ATOM 1 N LYS A 814 -35.781 -7.835 -64.353 1.00103.04 ATOM 2 CA LYS A 814 -36.892 -8.772 -64.357 1.00108.47 ATOM 3 C LYS A 814 -37.619 -8.744 -65.698 1.00112.73 ATOM 4 O LYS A 814 -37.463 -7.823 -66.504 1.00111.10 ATOM 5 CB LYS A 814 -37.866 -8.454 -63.222 1.00107.87 ATOM 6 CG LYS A 814 -37.219 -8.412 -61.847 1.00106.49 ATOM 7 CD LYS A 814 -38.251 -8.181 -60.756 1.00107.02 ATOM 8 CE LYS A 814 -39.213 -9.353 -60.648 1.00110.25 ATOM 9 NZ LYS A 814 -38.509 -10.613 -60.283 1.00111.98 ATOM 10 N SER A 815 -38.423 -9.779 -65.930 1.00116.95 ATOM 11 CA SER A 815 -39.181 -9.879 -67.168 1.00117.36 ATOM 12 C SER A 815 -40.273 -8.818 -67.212 1.00121.16 ATOM 13 O SER A 815 -40.934 -8.540 -66.207 1.00122.80 ATOM 14 CB SER A 815 -39.796 -11.272 -67.304 1.00114.05 ATOM 15 OG SER A 815 -38.795 -12.275 -67.308 1.00111.79 ATOM 16 N GLU A 816 -40.462 -8.225 -68.387 1.00124.03 ATOM 17 CA GLU A 816 -41.453 -7.174 -68.568 1.00125.75 ATOM 18 C GLU A 816 -42.768 -7.775 -69.050 1.00123.72 ATOM 19 O GLU A 816 -42.786 -8.591 -69.978 1.00120.76 ATOM 20 CB GLU A 816 -40.946 -6.118 -69.554 1.00130.50 ATOM 21 CG GLU A 816 -40.578 -6.649 -70.932 1.00133.29 ATOM 22 CD GLU A 816 -39.926 -5.597 -71.808 1.00135.08 ATOM 23 OE1 GLU A 816 -38.792 -5.178 -71.492 1.00136.31 ATOM 24 OE2 GLU A 816 -40.551 -5.182 -72.806 1.00136.93 ATOM 25 N ILE A 817 -43.861 -7.384 -68.404 1.00122.62 ATOM 26 CA ILE A 817 -45.201 -7.824 -68.776 1.00123.65 ATOM 27 C ILE A 817 -45.787 -6.732 -69.664 1.00122.90 ATOM 28 O ILE A 817 -46.269 -5.707 -69.176 1.00122.11 ATOM 29 CB ILE A 817 -46.074 -8.092 -67.548 1.00125.38 ATOM 30 N GLU A 818 -45.743 -6.950 -70.976 1.00121.22 ATOM 31 CA GLU A 818 -46.170 -5.962 -71.955 1.00118.44 ATOM 32 C GLU A 818 -47.432 -6.436 -72.662 1.00131.77 ATOM 33 O GLU A 818 -47.545 -7.608 -73.033 1.00132.66 ATOM 34 CB GLU A 818 -45.064 -5.698 -72.982 1.00111.93 ATOM 35 CG GLU A 818 -45.224 -4.397 -73.750 1.00107.23 ATOM 36 CD GLU A 818 -44.938 -3.176 -72.895 1.00100.57 ATOM 37 OE1 GLU A 818 -44.231 -3.315 -71.873 1.00 88.33 ATOM 38 OE2 GLU A 818 -45.421 -2.078 -73.243 1.00101.18 ATOM 39 N VAL A 819 -48.378 -5.515 -72.848 1.00139.38 ATOM 40 CA VAL A 819 -49.638 -5.820 -73.517 1.00146.61 ATOM 41 C VAL A 819 -50.269 -4.528 -74.019 1.00144.97 ATOM 42 O VAL A 819 -49.739 -3.435 -73.791 1.00148.56 ATOM 43 CB VAL A 819 -50.600 -6.575 -72.581 1.00150.46 ATOM 44 N MET A 820 -51.405 -4.645 -74.704 1.00138.41 ATOM 45 CA MET A 820 -52.123 -3.497 -75.242 1.00134.25 ATOM 46 C MET A 820 -53.573 -3.559 -74.787 1.00130.56 ATOM 47 O MET A 820 -54.218 -4.606 -74.901 1.00133.01 ATOM 48 CB MET A 820 -52.045 -3.461 -76.772 1.00134.66 ATOM 49 N VAL A 821 -54.079 -2.440 -74.278 1.00124.09 ATOM 50 CA VAL A 821 -55.439 -2.374 -73.764 1.00120.58 ATOM 51 C VAL A 821 -56.391 -1.985 -74.889 1.00128.75 ATOM 52 O VAL A 821 -55.998 -1.395 -75.898 1.00135.13 ATOM 53 CB VAL A 821 -55.548 -1.391 -72.580 1.00110.85 ATOM 54 CG1 VAL A 821 -54.746 -1.900 -71.393 1.00102.76 ATOM 55 CG2 VAL A 821 -55.072 -0.008 -72.995 1.00106.52 ATOM 56 N GLN A 822 -57.666 -2.323 -74.708 1.00120.73 ATOM 57 CA GLN A 822 -58.692 -2.022 -75.702 1.00119.02 ATOM 58 C GLN A 822 -60.023 -1.845 -74.989 1.00119.41 ATOM 59 O GLN A 822 -60.472 -2.751 -74.282 1.00120.39 ATOM 60 CB GLN A 822 -58.786 -3.131 -76.752 1.00117.96 ATOM 61 N VAL A 823 -60.649 -0.687 -75.179 1.00114.98 ATOM 62 CA VAL A 823 -61.922 -0.358 -74.547 1.00115.17 ATOM 63 C VAL A 823 -62.989 -0.304 -75.631 1.00124.22 ATOM 64 O VAL A 823 -62.915 0.528 -76.544 1.00128.92 ATOM 65 CB VAL A 823 -61.848 0.971 -73.779 1.00112.80 ATOM 66 N ASN A 824 -63.978 -1.196 -75.529 1.00125.08 ATOM 67 CA ASN A 824 -65.104 -1.259 -76.463 1.00118.73 ATOM 68 C ASN A 824 -64.646 -1.498 -77.900 1.00124.84 ATOM 69 O ASN A 824 -65.279 -1.030 -78.850 1.00124.32 ATOM 70 CB ASN A 824 -65.967 0.004 -76.381 1.00112.79 ATOM 71 N GLY A 825 -63.545 -2.227 -78.073 1.00135.31 ATOM 72 CA GLY A 825 -63.071 -2.570 -79.400 1.00143.01 ATOM 73 C GLY A 825 -61.803 -1.852 -79.815 1.00148.43 ATOM 74 O GLY A 825 -60.806 -2.493 -80.160 1.00151.53 ATOM 75 N LYS A 826 -61.829 -0.522 -79.792 1.00148.01 ATOM 76 CA LYS A 826 -60.687 0.266 -80.223 1.00141.26 ATOM 77 C LYS A 826 -59.606 0.285 -79.144 1.00138.32 ATOM 78 O LYS A 826 -59.828 -0.089 -77.990 1.00140.21 ATOM 79 CB LYS A 826 -61.120 1.690 -80.569 1.00139.96 ATOM 80 N LEU A 827 -58.417 0.732 -79.537 1.00130.61 ATOM 81 CA LEU A 827 -57.284 0.813 -78.623 1.00123.41 ATOM 82 C LEU A 827 -57.464 1.952 -77.624 1.00124.54 ATOM 83 O LEU A 827 -56.867 3.018 -77.770 1.00123.89 ATOM 84 CB LEU A 827 -55.979 0.998 -79.400 1.00118.21 ATOM 85 N ALA A 840 -56.456 -12.290 -64.986 1.00158.80 ATOM 86 CA ALA A 840 -56.347 -12.121 -63.542 1.00161.57 ATOM 87 C ALA A 840 -55.236 -11.137 -63.189 1.00158.03 ATOM 88 O ALA A 840 -55.500 -10.039 -62.698 1.00157.93 ATOM 89 CB ALA A 840 -56.101 -13.462 -62.868 1.00165.05 ATOM 90 N ASP A 841 -53.989 -11.540 -63.444 1.00151.72 ATOM 91 CA ASP A 841 -52.857 -10.671 -63.142 1.00145.17 ATOM 92 C ASP A 841 -52.788 -9.495 -64.109 1.00140.83 ATOM 93 O ASP A 841 -52.455 -8.373 -63.709 1.00140.26 ATOM 94 CB ASP A 841 -51.556 -11.472 -63.177 1.00142.04 ATOM 95 N LEU A 842 -53.100 -9.730 -65.382 1.00132.99 ATOM 96 CA LEU A 842 -53.075 -8.679 -66.389 1.00120.40 ATOM 97 C LEU A 842 -54.368 -7.875 -66.440 1.00116.70 ATOM 98 O LEU A 842 -54.399 -6.822 -67.086 1.00118.97 ATOM 99 CB LEU A 842 -52.789 -9.279 -67.770 1.00114.71 ATOM 100 CG LEU A 842 -52.060 -8.382 -68.773 1.00111.80 ATOM 101 CD1 LEU A 842 -50.662 -8.049 -68.272 1.00110.27 ATOM 102 CD2 LEU A 842 -52.000 -9.044 -70.140 1.00113.46 ATOM 103 N GLU A 843 -55.430 -8.342 -65.780 1.00117.80 ATOM 104 CA GLU A 843 -56.686 -7.601 -65.769 1.00120.29 ATOM 105 C GLU A 843 -56.697 -6.534 -64.681 1.00133.18 ATOM 106 O GLU A 843 -57.238 -5.442 -64.886 1.00136.69 ATOM 107 CB GLU A 843 -57.861 -8.563 -65.586 1.00 83.80 ATOM 108 N ALA A 844 -56.109 -6.832 -63.519 1.00157.80 ATOM 109 CA ALA A 844 -56.049 -5.844 -62.448 1.00164.31 ATOM 110 C ALA A 844 -55.073 -4.721 -62.774 1.00160.02 ATOM 111 O ALA A 844 -55.277 -3.579 -62.345 1.00169.17 ATOM 112 CB ALA A 844 -55.667 -6.517 -61.130 1.00169.35 ATOM 113 N ALA A 845 -54.011 -5.021 -63.525 1.00142.39 ATOM 114 CA ALA A 845 -53.078 -3.983 -63.949 1.00124.52 ATOM 115 C ALA A 845 -53.668 -3.120 -65.057 1.00123.36 ATOM 116 O ALA A 845 -53.437 -1.906 -65.090 1.00115.42 ATOM 117 CB ALA A 845 -51.763 -4.613 -64.407 1.00110.90 ATOM 118 N ALA A 846 -54.431 -3.726 -65.971 1.00125.87 ATOM 119 CA ALA A 846 -55.062 -2.955 -67.037 1.00128.88 ATOM 120 C ALA A 846 -56.175 -2.071 -66.493 1.00138.21 ATOM 121 O ALA A 846 -56.342 -0.930 -66.938 1.00141.91 ATOM 122 CB ALA A 846 -55.599 -3.892 -68.118 1.00126.62 ATOM 123 N LEU A 847 -56.950 -2.580 -65.531 1.00145.46 ATOM 124 CA LEU A 847 -58.008 -1.780 -64.926 1.00150.38 ATOM 125 C LEU A 847 -57.457 -0.653 -64.064 1.00155.67 ATOM 126 O LEU A 847 -58.203 0.272 -63.724 1.00158.77 ATOM 127 CB LEU A 847 -58.931 -2.670 -64.092 1.00150.58 ATOM 128 N ALA A 848 -56.173 -0.709 -63.701 1.00155.81 ATOM 129 CA ALA A 848 -55.581 0.368 -62.914 1.00154.94 ATOM 130 C ALA A 848 -55.387 1.623 -63.755 1.00155.78 ATOM 131 O ALA A 848 -55.653 2.736 -63.286 1.00158.82 ATOM 132 CB ALA A 848 -54.252 -0.089 -62.314 1.00149.15 ATOM 133 N ASN A 849 -54.930 1.461 -64.996 1.00148.76 ATOM 134 CA ASN A 849 -54.689 2.575 -65.914 1.00141.13 ATOM 135 C ASN A 849 -53.774 3.634 -65.304 1.00139.76 ATOM 136 O ASN A 849 -54.233 4.695 -64.881 1.00142.49 ATOM 137 CB ASN A 849 -56.013 3.213 -66.346 1.00136.86 ATOM 138 CG ASN A 849 -56.791 2.342 -67.313 1.00131.02 ATOM 139 OD1 ASN A 849 -56.209 1.624 -68.127 1.00124.00 ATOM 140 ND2 ASN A 849 -58.116 2.403 -67.232 1.00135.12 ATOM 141 N ILE A 864 -65.292 -8.993 -71.084 1.00109.04 ATOM 142 CA ILE A 864 -64.050 -8.446 -70.555 1.00115.04 ATOM 143 C ILE A 864 -63.018 -9.554 -70.381 1.00124.10 ATOM 144 O ILE A 864 -62.265 -9.568 -69.407 1.00120.60 ATOM 145 CB ILE A 864 -64.287 -7.709 -69.226 1.00114.25 ATOM 146 N ILE A 865 -62.991 -10.483 -71.331 1.00134.10 ATOM 147 CA ILE A 865 -62.050 -11.596 -71.311 1.00141.32 ATOM 148 C ILE A 865 -60.813 -11.206 -72.108 1.00149.64 ATOM 149 O ILE A 865 -60.904 -10.532 -73.141 1.00154.05 ATOM 150 CB ILE A 865 -62.704 -12.877 -71.866 1.00137.71 ATOM 151 CG1 ILE A 865 -61.715 -14.046 -71.851 1.00131.77 ATOM 152 CG2 ILE A 865 -63.255 -12.642 -73.266 1.00138.78 ATOM 153 CD1 ILE A 865 -61.212 -14.406 -70.469 1.00124.51 ATOM 154 N VAL A 866 -59.650 -11.619 -71.620 1.00150.41 ATOM 155 CA VAL A 866 -58.387 -11.277 -72.239 1.00150.31 ATOM 156 C VAL A 866 -57.906 -12.447 -73.089 1.00148.80 ATOM 157 O VAL A 866 -58.431 -13.555 -73.021 1.00156.21 ATOM 158 CB VAL A 866 -57.326 -10.875 -71.189 1.00147.52 ATOM 159 N VAL A 867 -56.895 -12.196 -73.904 1.00133.27 ATOM 160 CA VAL A 867 -56.237 -13.225 -74.708 1.00121.35 ATOM 161 C VAL A 867 -54.969 -13.654 -73.978 1.00118.97 ATOM 162 O VAL A 867 -54.140 -12.793 -73.654 1.00106.03 ATOM 163 CB VAL A 867 -55.908 -12.717 -76.124 1.00106.76 ATOM 164 CG1 VAL A 867 -54.961 -13.675 -76.828 1.00106.47 ATOM 165 CG2 VAL A 867 -57.183 -12.534 -76.930 1.00 98.14 ATOM 166 N PRO A 868 -54.780 -14.951 -73.704 1.00126.93 ATOM 167 CA PRO A 868 -53.600 -15.383 -72.942 1.00126.14 ATOM 168 C PRO A 868 -52.294 -15.043 -73.641 1.00126.11 ATOM 169 O PRO A 868 -51.673 -15.900 -74.279 1.00127.46 ATOM 170 CB PRO A 868 -53.795 -16.900 -72.818 1.00126.55 ATOM 171 CG PRO A 868 -54.709 -17.261 -73.944 1.00130.30 ATOM 172 CD PRO A 868 -55.624 -16.087 -74.113 1.00132.09 ATOM 173 N GLY A 869 -51.872 -13.786 -73.523 1.00124.41 ATOM 174 CA GLY A 869 -50.651 -13.336 -74.159 1.00125.19 ATOM 175 C GLY A 869 -50.346 -11.872 -73.924 1.00126.33 ATOM 176 O GLY A 869 -49.783 -11.505 -72.887 1.00124.93 ATOM 177 N ARG A 870 -50.709 -11.025 -74.883 1.00129.80 ATOM 178 CA ARG A 870 -50.461 -9.589 -74.799 1.00126.46 ATOM 179 C ARG A 870 -51.637 -8.825 -75.398 1.00120.70 ATOM 180 O ARG A 870 -51.479 -7.977 -76.277 1.00125.05 ATOM 181 CB ARG A 870 -49.151 -9.221 -75.493 1.00126.98 ATOM 182 N LEU A 871 -52.841 -9.127 -74.919 1.00110.05 ATOM 183 CA LEU A 871 -54.046 -8.467 -75.403 1.00102.05 ATOM 184 C LEU A 871 -55.108 -8.515 -74.316 1.00114.83 ATOM 185 O LEU A 871 -55.433 -9.593 -73.810 1.00114.28 ATOM 186 CB LEU A 871 -54.565 -9.129 -76.685 1.00 98.87 ATOM 187 CG LEU A 871 -55.830 -8.522 -77.295 1.00 84.82 ATOM 188 N VAL A 872 -55.642 -7.349 -73.963 1.00124.14 ATOM 189 CA VAL A 872 -56.696 -7.229 -72.964 1.00125.88 ATOM 190 C VAL A 872 -57.789 -6.338 -73.538 1.00129.21 ATOM 191 O VAL A 872 -57.518 -5.204 -73.951 1.00132.91 ATOM 192 CB VAL A 872 -56.171 -6.667 -71.631 1.00115.06 ATOM 193 CG1 VAL A 872 -55.506 -7.765 -70.820 1.00107.95 ATOM 194 CG2 VAL A 872 -55.186 -5.535 -71.879 1.00111.84 ATOM 195 N ASN A 873 -59.015 -6.851 -73.573 1.00131.40 ATOM 196 CA ASN A 873 -60.164 -6.117 -74.082 1.00136.16 ATOM 197 C ASN A 873 -61.116 -5.791 -72.939 1.00142.57 ATOM 198 O ASN A 873 -61.395 -6.643 -72.089 1.00145.09 ATOM 199 CB ASN A 873 -60.894 -6.921 -75.161 1.00137.67 ATOM 200 N ILE A 874 -61.607 -4.554 -72.920 1.00139.76 ATOM 201 CA ILE A 874 -62.504 -4.066 -71.876 1.00139.01 ATOM 202 C ILE A 874 -63.901 -3.938 -72.468 1.00135.83 ATOM 203 O ILE A 874 -64.182 -3.008 -73.235 1.00137.32 ATOM 204 CB ILE A 874 -62.033 -2.728 -71.299 1.00139.28 ATOM 205 N VAL A 875 -64.781 -4.873 -72.115 1.00131.02 ATOM 206 CA VAL A 875 -66.172 -4.854 -72.569 1.00126.11 ATOM 207 C VAL A 875 -66.939 -3.918 -71.638 1.00129.84 ATOM 208 O VAL A 875 -67.345 -4.307 -70.541 1.00135.13 ATOM 209 CB VAL A 875 -66.786 -6.255 -72.597 1.00118.43 ATOM 210 N VAL A 876 -67.146 -2.679 -72.074 1.00127.16 ATOM 211 CA VAL A 876 -67.830 -1.683 -71.259 1.00128.90 ATOM 212 C VAL A 876 -69.315 -1.647 -71.609 1.00143.33 ATOM 213 O VAL A 876 -70.167 -1.477 -70.736 1.00148.27 ATOM 214 CB VAL A 876 -67.182 -0.292 -71.426 1.00120.73 ATOM 215 CG1 VAL A 876 -67.188 0.134 -72.888 1.00118.65 ATOM 216 CG2 VAL A 876 -67.887 0.738 -70.557 1.00123.36 ATOM 217 OXT VAL A 876 -69.704 -1.800 -72.767 1.00148.18 TER