HEADER LIGASE 31-DEC-69 6YKX TITLE Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound TITLE 2 11j COMPND MOL_ID: 1; COMPND 2 MOLECULE: Leucine--tRNA ligase; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 EC: 6.1.1.4; COMPND 6 FRAGMENT: Leucyl-tRNA ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.41 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 829 REMARK 465 GLY A 830 REMARK 465 LYS A 831 REMARK 465 ILE A 832 REMARK 465 THR A 833 REMARK 465 VAL A 834 REMARK 465 ALA A 835 REMARK 465 ALA A 836 REMARK 465 ASP A 837 REMARK 465 ALA A 838 REMARK 465 SER A 839 REMARK 465 LYS A 840 REMARK 465 GLU A 851 REMARK 465 GLY A 852 REMARK 465 ALA A 853 REMARK 465 VAL A 854 REMARK 465 LYS A 855 REMARK 465 PHE A 856 REMARK 465 MET A 857 REMARK 465 GLU A 858 REMARK 465 GLY A 859 REMARK 465 LYS A 860 REMARK 465 PRO A 861 REMARK 465 ALA A 862 REMARK 465 LYS A 863 REMARK 465 LYS A 864 DBREF 6YKX A 1 876 UNP A0A5K1KQ A0A5K1KQ39_ 3 878 SEQRES 1 A 63 LYS SER GLU ILE GLU VAL MET VAL GLN VAL ASN GLY LYS SEQRES 2 A 63 LEU ARG GLY LYS ILE THR VAL ALA ALA ASP ALA SER LYS SEQRES 3 A 63 ALA ASP LEU GLU ALA ALA ALA LEU ALA ASN GLU GLY ALA SEQRES 4 A 63 VAL LYS PHE MET GLU GLY LYS PRO ALA LYS LYS ILE ILE SEQRES 5 A 63 VAL VAL PRO GLY ARG LEU VAL ASN ILE VAL VAL ATOM 1 N LYS A 814 -35.772 -7.501 -64.087 1.00 84.83 ATOM 2 CA LYS A 814 -36.835 -8.487 -64.023 1.00 93.84 ATOM 3 C LYS A 814 -37.723 -8.329 -65.255 1.00 99.97 ATOM 4 O LYS A 814 -37.951 -7.210 -65.728 1.00 98.88 ATOM 5 CB LYS A 814 -37.617 -8.367 -62.707 1.00 93.82 ATOM 6 CG LYS A 814 -36.821 -8.959 -61.521 1.00 92.37 ATOM 7 CD LYS A 814 -37.606 -9.025 -60.205 1.00 90.95 ATOM 8 CE LYS A 814 -37.087 -10.142 -59.276 1.00 85.07 ATOM 9 NZ LYS A 814 -37.535 -11.511 -59.662 1.00 81.84 ATOM 10 N SER A 815 -38.182 -9.464 -65.790 1.00103.85 ATOM 11 CA SER A 815 -38.650 -9.544 -67.170 1.00105.53 ATOM 12 C SER A 815 -39.958 -8.784 -67.369 1.00109.72 ATOM 13 O SER A 815 -40.779 -8.654 -66.458 1.00113.83 ATOM 14 CB SER A 815 -38.820 -11.008 -67.590 1.00101.92 ATOM 15 OG SER A 815 -38.577 -11.185 -68.980 1.00 98.45 ATOM 16 N GLU A 816 -40.153 -8.306 -68.595 1.00112.56 ATOM 17 CA GLU A 816 -41.201 -7.339 -68.892 1.00117.38 ATOM 18 C GLU A 816 -42.603 -7.934 -68.774 1.00117.23 ATOM 19 O GLU A 816 -42.839 -9.120 -69.028 1.00116.67 ATOM 20 CB GLU A 816 -41.014 -6.774 -70.300 1.00122.12 ATOM 21 CG GLU A 816 -41.716 -5.448 -70.543 1.00126.95 ATOM 22 CD GLU A 816 -40.756 -4.281 -70.551 1.00129.20 ATOM 23 OE1 GLU A 816 -39.904 -4.225 -71.466 1.00130.21 ATOM 24 OE2 GLU A 816 -40.854 -3.426 -69.642 1.00129.05 ATOM 25 N ILE A 817 -43.537 -7.073 -68.389 1.00114.26 ATOM 26 CA ILE A 817 -44.964 -7.357 -68.406 1.00111.09 ATOM 27 C ILE A 817 -45.551 -6.352 -69.396 1.00119.10 ATOM 28 O ILE A 817 -45.813 -5.200 -69.028 1.00121.53 ATOM 29 CB ILE A 817 -45.595 -7.225 -67.012 1.00 98.86 ATOM 30 CG1 ILE A 817 -44.837 -8.045 -65.949 1.00 89.59 ATOM 31 CG2 ILE A 817 -47.055 -7.664 -67.029 1.00 97.67 ATOM 32 CD1 ILE A 817 -44.365 -9.441 -66.376 1.00 84.20 ATOM 33 N GLU A 818 -45.745 -6.769 -70.657 1.00120.37 ATOM 34 CA GLU A 818 -46.071 -5.869 -71.765 1.00120.80 ATOM 35 C GLU A 818 -47.388 -6.269 -72.430 1.00125.75 ATOM 36 O GLU A 818 -47.597 -7.450 -72.734 1.00128.20 ATOM 37 CB GLU A 818 -44.936 -5.861 -72.802 1.00115.26 ATOM 38 CG GLU A 818 -45.379 -5.701 -74.251 1.00115.05 ATOM 39 N VAL A 819 -48.258 -5.291 -72.667 1.00124.11 ATOM 40 CA VAL A 819 -49.546 -5.532 -73.320 1.00124.22 ATOM 41 C VAL A 819 -50.170 -4.191 -73.681 1.00118.39 ATOM 42 O VAL A 819 -49.751 -3.143 -73.177 1.00120.14 ATOM 43 CB VAL A 819 -50.476 -6.367 -72.397 1.00127.04 ATOM 44 N MET A 820 -51.177 -4.223 -74.553 1.00112.22 ATOM 45 CA MET A 820 -51.974 -3.059 -74.923 1.00110.00 ATOM 46 C MET A 820 -53.383 -3.193 -74.353 1.00107.98 ATOM 47 O MET A 820 -53.791 -4.264 -73.900 1.00104.62 ATOM 48 CB MET A 820 -52.027 -2.892 -76.448 1.00110.05 ATOM 49 N VAL A 821 -54.135 -2.085 -74.390 1.00109.88 ATOM 50 CA VAL A 821 -55.434 -1.976 -73.726 1.00110.65 ATOM 51 C VAL A 821 -56.411 -1.214 -74.622 1.00114.34 ATOM 52 O VAL A 821 -56.013 -0.332 -75.389 1.00117.81 ATOM 53 CB VAL A 821 -55.297 -1.285 -72.343 1.00106.00 ATOM 54 CG1 VAL A 821 -54.650 -2.226 -71.330 1.00102.81 ATOM 55 CG2 VAL A 821 -54.480 0.005 -72.458 1.00101.81 ATOM 56 N GLN A 822 -57.703 -1.553 -74.524 1.00113.30 ATOM 57 CA GLN A 822 -58.711 -0.908 -75.367 1.00111.18 ATOM 58 C GLN A 822 -60.095 -0.947 -74.725 1.00114.31 ATOM 59 O GLN A 822 -60.587 -2.018 -74.358 1.00115.45 ATOM 60 CB GLN A 822 -58.757 -1.556 -76.761 1.00107.43 ATOM 61 CG GLN A 822 -59.093 -3.044 -76.771 1.00106.12 ATOM 62 CD GLN A 822 -59.231 -3.619 -78.172 1.00104.38 ATOM 63 OE1 GLN A 822 -60.336 -3.720 -78.708 1.00107.87 ATOM 64 NE2 GLN A 822 -58.110 -4.017 -78.762 1.00 99.26 ATOM 65 N VAL A 823 -60.726 0.223 -74.614 1.00115.25 ATOM 66 CA VAL A 823 -62.084 0.361 -74.094 1.00117.27 ATOM 67 C VAL A 823 -63.031 0.498 -75.281 1.00120.69 ATOM 68 O VAL A 823 -63.026 1.522 -75.973 1.00124.37 ATOM 69 CB VAL A 823 -62.210 1.563 -73.148 1.00117.86 ATOM 70 N ASN A 824 -63.848 -0.536 -75.509 1.00121.45 ATOM 71 CA ASN A 824 -64.811 -0.584 -76.617 1.00121.67 ATOM 72 C ASN A 824 -64.108 -0.547 -77.975 1.00125.90 ATOM 73 O ASN A 824 -64.406 0.283 -78.838 1.00123.44 ATOM 74 CB ASN A 824 -65.850 0.537 -76.506 1.00118.83 ATOM 75 N GLY A 825 -63.161 -1.466 -78.161 1.00129.37 ATOM 76 CA GLY A 825 -62.503 -1.636 -79.443 1.00135.68 ATOM 77 C GLY A 825 -61.382 -0.656 -79.733 1.00136.90 ATOM 78 O GLY A 825 -60.379 -1.022 -80.355 1.00138.37 ATOM 79 N LYS A 826 -61.540 0.590 -79.291 1.00134.94 ATOM 80 CA LYS A 826 -60.595 1.657 -79.597 1.00129.28 ATOM 81 C LYS A 826 -59.488 1.692 -78.546 1.00124.46 ATOM 82 O LYS A 826 -59.757 1.910 -77.360 1.00127.37 ATOM 83 CB LYS A 826 -61.316 3.003 -79.662 1.00128.58 ATOM 84 N LEU A 827 -58.248 1.491 -78.980 1.00115.77 ATOM 85 CA LEU A 827 -57.109 1.597 -78.073 1.00107.68 ATOM 86 C LEU A 827 -56.837 3.060 -77.735 1.00103.96 ATOM 87 O LEU A 827 -55.692 3.512 -77.765 1.00 98.86 ATOM 88 CB LEU A 827 -55.857 0.952 -78.680 1.00103.37 ATOM 89 N ALA A 840 -57.092 -11.265 -64.011 1.00115.65 ATOM 90 CA ALA A 840 -56.980 -11.029 -62.574 1.00118.16 ATOM 91 C ALA A 840 -55.692 -10.271 -62.203 1.00123.07 ATOM 92 O ALA A 840 -55.780 -9.248 -61.530 1.00123.14 ATOM 93 CB ALA A 840 -57.050 -12.341 -61.816 1.00115.36 ATOM 94 N ASP A 841 -54.519 -10.762 -62.616 1.00126.56 ATOM 95 CA ASP A 841 -53.293 -9.998 -62.372 1.00129.25 ATOM 96 C ASP A 841 -53.022 -8.947 -63.451 1.00124.28 ATOM 97 O ASP A 841 -52.428 -7.906 -63.150 1.00126.42 ATOM 98 CB ASP A 841 -52.074 -10.941 -62.226 1.00131.21 ATOM 99 CG ASP A 841 -51.894 -11.881 -63.401 1.00134.69 ATOM 100 OD1 ASP A 841 -52.705 -12.818 -63.544 1.00137.28 ATOM 101 OD2 ASP A 841 -50.916 -11.703 -64.168 1.00133.93 ATOM 102 N LEU A 842 -53.464 -9.198 -64.692 1.00117.72 ATOM 103 CA LEU A 842 -53.422 -8.190 -65.750 1.00104.54 ATOM 104 C LEU A 842 -54.650 -7.287 -65.725 1.00103.00 ATOM 105 O LEU A 842 -54.554 -6.094 -66.033 1.00 93.64 ATOM 106 CB LEU A 842 -53.318 -8.856 -67.113 1.00 96.10 ATOM 107 CG LEU A 842 -52.052 -9.628 -67.465 1.00 94.27 ATOM 108 CD1 LEU A 842 -52.341 -11.124 -67.532 1.00 96.13 ATOM 109 CD2 LEU A 842 -51.489 -9.122 -68.785 1.00 92.39 ATOM 110 N GLU A 843 -55.811 -7.845 -65.395 1.00108.50 ATOM 111 CA GLU A 843 -57.016 -7.036 -65.287 1.00121.79 ATOM 112 C GLU A 843 -56.961 -6.092 -64.096 1.00130.16 ATOM 113 O GLU A 843 -57.762 -5.152 -64.033 1.00136.79 ATOM 114 CB GLU A 843 -58.252 -7.934 -65.192 1.00124.47 ATOM 115 CG GLU A 843 -58.335 -8.977 -66.293 1.00126.29 ATOM 116 N ALA A 844 -56.033 -6.314 -63.161 1.00131.86 ATOM 117 CA ALA A 844 -55.837 -5.427 -62.019 1.00134.23 ATOM 118 C ALA A 844 -54.863 -4.295 -62.326 1.00136.57 ATOM 119 O ALA A 844 -55.054 -3.171 -61.847 1.00139.86 ATOM 120 CB ALA A 844 -55.343 -6.218 -60.806 1.00131.71 ATOM 121 N ALA A 845 -53.812 -4.566 -63.103 1.00131.22 ATOM 122 CA ALA A 845 -52.929 -3.489 -63.534 1.00124.83 ATOM 123 C ALA A 845 -53.561 -2.676 -64.658 1.00120.55 ATOM 124 O ALA A 845 -53.441 -1.445 -64.682 1.00121.84 ATOM 125 CB ALA A 845 -51.576 -4.054 -63.968 1.00120.43 ATOM 126 N ALA A 846 -54.255 -3.343 -65.585 1.00113.40 ATOM 127 CA ALA A 846 -54.888 -2.664 -66.709 1.00108.02 ATOM 128 C ALA A 846 -56.197 -1.982 -66.340 1.00108.77 ATOM 129 O ALA A 846 -56.765 -1.284 -67.185 1.00117.13 ATOM 130 CB ALA A 846 -55.137 -3.644 -67.856 1.00106.19 ATOM 131 N LEU A 847 -56.712 -2.190 -65.127 1.00104.80 ATOM 132 CA LEU A 847 -57.763 -1.329 -64.603 1.00 98.99 ATOM 133 C LEU A 847 -57.195 -0.122 -63.868 1.00100.29 ATOM 134 O LEU A 847 -57.954 0.794 -63.534 1.00 93.27 ATOM 135 CB LEU A 847 -58.702 -2.114 -63.673 1.00 93.45 ATOM 136 N ALA A 848 -55.876 -0.097 -63.627 1.00103.27 ATOM 137 CA ALA A 848 -55.207 1.031 -62.986 1.00105.08 ATOM 138 C ALA A 848 -54.839 2.100 -64.011 1.00115.31 ATOM 139 O ALA A 848 -53.864 2.835 -63.826 1.00112.09 ATOM 140 CB ALA A 848 -53.960 0.564 -62.235 1.00 94.34 ATOM 141 N ASN A 849 -55.624 2.194 -65.085 1.00125.04 ATOM 142 CA ASN A 849 -55.444 3.197 -66.139 1.00125.14 ATOM 143 C ASN A 849 -56.148 4.512 -65.793 1.00130.56 ATOM 144 O ASN A 849 -57.235 4.806 -66.301 1.00134.31 ATOM 145 CB ASN A 849 -55.970 2.663 -67.477 1.00120.17 ATOM 146 CG ASN A 849 -55.510 1.245 -67.762 1.00111.25 ATOM 147 OD1 ASN A 849 -54.722 0.665 -67.006 1.00103.20 ATOM 148 ND2 ASN A 849 -56.017 0.669 -68.848 1.00108.08 ATOM 149 N ILE A 864 -64.354 -7.567 -69.045 1.00 97.38 ATOM 150 CA ILE A 864 -62.903 -7.441 -68.899 1.00103.45 ATOM 151 C ILE A 864 -62.171 -8.672 -69.441 1.00113.75 ATOM 152 O ILE A 864 -61.620 -9.462 -68.671 1.00114.66 ATOM 153 CB ILE A 864 -62.506 -7.190 -67.429 1.00 98.10 ATOM 154 N ILE A 865 -62.151 -8.818 -70.768 1.00118.88 ATOM 155 CA ILE A 865 -61.475 -9.931 -71.430 1.00123.46 ATOM 156 C ILE A 865 -59.965 -9.759 -71.297 1.00125.84 ATOM 157 O ILE A 865 -59.487 -8.696 -70.884 1.00129.07 ATOM 158 CB ILE A 865 -61.896 -10.036 -72.908 1.00123.91 ATOM 159 N VAL A 866 -59.205 -10.801 -71.640 1.00123.94 ATOM 160 CA VAL A 866 -57.746 -10.765 -71.543 1.00120.81 ATOM 161 C VAL A 866 -57.147 -11.962 -72.274 1.00119.01 ATOM 162 O VAL A 866 -56.806 -12.974 -71.650 1.00118.64 ATOM 163 CB VAL A 866 -57.273 -10.736 -70.075 1.00116.46 ATOM 164 N VAL A 867 -57.011 -11.851 -73.593 1.00116.19 ATOM 165 CA VAL A 867 -56.392 -12.919 -74.391 1.00109.70 ATOM 166 C VAL A 867 -54.945 -13.114 -73.935 1.00115.83 ATOM 167 O VAL A 867 -54.178 -12.131 -73.869 1.00110.58 ATOM 168 CB VAL A 867 -56.468 -12.581 -75.893 1.00 95.31 ATOM 169 CG1 VAL A 867 -55.339 -13.246 -76.657 1.00 91.14 ATOM 170 CG2 VAL A 867 -57.815 -12.988 -76.459 1.00 86.37 ATOM 171 N PRO A 868 -54.519 -14.358 -73.615 1.00120.45 ATOM 172 CA PRO A 868 -53.255 -14.574 -72.882 1.00115.68 ATOM 173 C PRO A 868 -51.999 -13.902 -73.427 1.00106.35 ATOM 174 O PRO A 868 -51.340 -14.442 -74.325 1.00109.91 ATOM 175 CB PRO A 868 -53.097 -16.099 -72.934 1.00118.13 ATOM 176 CG PRO A 868 -54.492 -16.618 -72.993 1.00122.60 ATOM 177 CD PRO A 868 -55.277 -15.612 -73.799 1.00125.00 ATOM 178 N GLY A 869 -51.650 -12.733 -72.870 1.00 98.15 ATOM 179 CA GLY A 869 -50.313 -12.176 -72.950 1.00 90.89 ATOM 180 C GLY A 869 -50.185 -10.896 -73.761 1.00 93.34 ATOM 181 O GLY A 869 -49.275 -10.098 -73.499 1.00 88.00 ATOM 182 N ARG A 870 -51.053 -10.690 -74.747 1.00 99.47 ATOM 183 CA ARG A 870 -50.865 -9.617 -75.718 1.00105.80 ATOM 184 C ARG A 870 -51.830 -8.452 -75.546 1.00107.61 ATOM 185 O ARG A 870 -51.413 -7.295 -75.646 1.00112.83 ATOM 186 CB ARG A 870 -50.989 -10.177 -77.143 1.00107.84 ATOM 187 N LEU A 871 -53.104 -8.723 -75.277 1.00104.14 ATOM 188 CA LEU A 871 -54.139 -7.703 -75.273 1.00102.11 ATOM 189 C LEU A 871 -54.959 -7.794 -73.994 1.00110.74 ATOM 190 O LEU A 871 -55.175 -8.879 -73.449 1.00108.03 ATOM 191 CB LEU A 871 -55.057 -7.844 -76.518 1.00 96.17 ATOM 192 CG LEU A 871 -56.333 -7.009 -76.712 1.00 95.33 ATOM 193 CD1 LEU A 871 -56.695 -7.000 -78.184 1.00 99.86 ATOM 194 CD2 LEU A 871 -57.527 -7.525 -75.917 1.00 96.13 ATOM 195 N VAL A 872 -55.418 -6.633 -73.526 1.00117.58 ATOM 196 CA VAL A 872 -56.382 -6.518 -72.432 1.00119.79 ATOM 197 C VAL A 872 -57.552 -5.681 -72.950 1.00124.61 ATOM 198 O VAL A 872 -57.401 -4.479 -73.207 1.00124.68 ATOM 199 CB VAL A 872 -55.762 -5.890 -71.171 1.00113.91 ATOM 200 CG1 VAL A 872 -56.592 -6.231 -69.944 1.00111.80 ATOM 201 CG2 VAL A 872 -54.309 -6.349 -70.980 1.00108.72 ATOM 202 N ASN A 873 -58.715 -6.313 -73.117 1.00126.99 ATOM 203 CA ASN A 873 -59.921 -5.637 -73.587 1.00128.01 ATOM 204 C ASN A 873 -60.834 -5.350 -72.398 1.00123.36 ATOM 205 O ASN A 873 -61.277 -6.281 -71.717 1.00123.66 ATOM 206 CB ASN A 873 -60.653 -6.483 -74.629 1.00131.39 ATOM 207 N ILE A 874 -61.116 -4.071 -72.152 1.00118.04 ATOM 208 CA ILE A 874 -61.963 -3.653 -71.037 1.00108.80 ATOM 209 C ILE A 874 -63.369 -3.415 -71.587 1.00110.66 ATOM 210 O ILE A 874 -63.621 -2.431 -72.294 1.00106.79 ATOM 211 CB ILE A 874 -61.402 -2.412 -70.319 1.00 97.57 ATOM 212 CG1 ILE A 874 -60.781 -1.424 -71.310 1.00101.89 ATOM 213 CG2 ILE A 874 -60.361 -2.810 -69.256 1.00 86.43 ATOM 214 CD1 ILE A 874 -60.292 -0.139 -70.674 1.00100.18 ATOM 215 N VAL A 875 -64.284 -4.337 -71.279 1.00115.21 ATOM 216 CA VAL A 875 -65.673 -4.253 -71.718 1.00122.82 ATOM 217 C VAL A 875 -66.321 -3.037 -71.073 1.00128.14 ATOM 218 O VAL A 875 -66.676 -3.070 -69.889 1.00129.53 ATOM 219 CB VAL A 875 -66.446 -5.540 -71.374 1.00124.97 ATOM 220 N VAL A 876 -66.486 -1.968 -71.853 1.00129.41 ATOM 221 CA VAL A 876 -66.892 -0.659 -71.341 1.00128.32 ATOM 222 C VAL A 876 -68.131 -0.741 -70.455 1.00133.61 ATOM 223 O VAL A 876 -68.009 -0.707 -69.228 1.00133.14 ATOM 224 CB VAL A 876 -67.118 0.344 -72.502 1.00124.98 ATOM 225 CG1 VAL A 876 -65.788 0.936 -72.955 1.00121.57 ATOM 226 CG2 VAL A 876 -67.848 -0.318 -73.672 1.00124.14 ATOM 227 OXT VAL A 876 -69.266 -0.849 -70.924 1.00137.69 TER