HEADER TRANSFERASE 31-DEC-69 6YYG TITLE Crystal Structure of 5-(trifluoromethoxy)indoline-2,3-dione TITLE 2 covalently bound to the PH domain of Bruton's tyrosine kinase mutant COMPND MOL_ID: 1; COMPND 2 MOLECULE: Tyrosine-protein kinase BTK; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 2.7.10.2; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.95 ANGSTORMS DBREF 6YYG A 2 170 UNP Q06187 BTK_HUMAN 36 204 SEQRES 1 A 34 SER ASP LEU VAL GLN LYS TYR HIS PRO CYS PHE TRP ILE SEQRES 2 A 34 ASP GLY GLN TYR LEU CYS CYS SER GLN THR ALA LYS ASN SEQRES 3 A 34 ALA MET GLY CYS GLN ILE LEU GLU ATOM 1 N SER A 136 32.353 15.859 83.206 1.00 40.79 ATOM 2 CA SER A 136 32.185 15.953 84.682 1.00 47.53 ATOM 3 C SER A 136 31.225 14.903 85.263 1.00 48.24 ATOM 4 O SER A 136 31.462 14.478 86.408 1.00 50.45 ATOM 5 CB SER A 136 31.808 17.349 85.112 1.00 50.91 ATOM 6 OG SER A 136 30.442 17.614 84.831 1.00 55.76 ATOM 7 N ASP A 137 30.148 14.558 84.545 1.00 48.19 ATOM 8 CA ASP A 137 29.109 13.656 85.120 1.00 45.00 ATOM 9 C ASP A 137 29.055 12.266 84.468 1.00 40.36 ATOM 10 O ASP A 137 27.933 11.809 84.191 1.00 41.75 ATOM 11 CB ASP A 137 27.729 14.317 85.074 1.00 49.56 ATOM 12 CG ASP A 137 27.710 15.721 85.652 1.00 57.98 ATOM 13 OD1 ASP A 137 28.360 15.934 86.692 1.00 61.49 ATOM 14 OD2 ASP A 137 27.048 16.591 85.055 1.00 60.60 ATOM 15 N LEU A 138 30.198 11.615 84.243 1.00 38.30 ATOM 16 CA LEU A 138 30.196 10.228 83.696 1.00 41.27 ATOM 17 C LEU A 138 29.592 9.277 84.738 1.00 40.87 ATOM 18 O LEU A 138 30.026 9.336 85.885 1.00 45.39 ATOM 19 CB LEU A 138 31.624 9.799 83.356 1.00 41.29 ATOM 20 CG LEU A 138 32.263 10.525 82.174 1.00 42.61 ATOM 21 CD1 LEU A 138 33.698 10.054 81.967 1.00 41.07 ATOM 22 CD2 LEU A 138 31.447 10.328 80.902 1.00 38.05 ATOM 23 N VAL A 139 28.627 8.431 84.375 1.00 40.50 ATOM 24 CA VAL A 139 28.064 7.432 85.338 1.00 38.09 ATOM 25 C VAL A 139 28.818 6.118 85.143 1.00 38.15 ATOM 26 O VAL A 139 29.391 5.931 84.045 1.00 40.25 ATOM 27 CB VAL A 139 26.532 7.322 85.207 1.00 39.34 ATOM 28 CG1 VAL A 139 25.889 8.646 85.569 1.00 36.76 ATOM 29 CG2 VAL A 139 26.070 6.871 83.833 1.00 39.43 ATOM 30 N GLN A 140 28.918 5.300 86.198 1.00 38.98 ATOM 31 CA GLN A 140 29.555 3.955 86.170 1.00 40.10 ATOM 32 C GLN A 140 28.455 2.902 86.219 1.00 35.70 ATOM 33 O GLN A 140 28.756 1.736 86.555 1.00 32.49 ATOM 34 CB GLN A 140 30.516 3.731 87.345 1.00 52.79 ATOM 35 CG GLN A 140 31.630 4.763 87.489 1.00 59.89 ATOM 36 CD GLN A 140 32.275 4.712 88.860 1.00 74.85 ATOM 37 OE1 GLN A 140 32.587 5.736 89.471 1.00 84.63 ATOM 38 NE2 GLN A 140 32.481 3.509 89.377 1.00 79.58 ATOM 39 N LYS A 141 27.213 3.317 85.951 1.00 33.05 ATOM 40 CA LYS A 141 26.034 2.410 85.982 1.00 32.87 ATOM 41 C LYS A 141 25.155 2.711 84.765 1.00 28.66 ATOM 42 O LYS A 141 24.961 3.901 84.461 1.00 29.63 ATOM 43 CB LYS A 141 25.246 2.618 87.278 1.00 36.17 ATOM 44 CG LYS A 141 25.941 2.142 88.547 1.00 40.68 ATOM 45 CD LYS A 141 25.179 2.483 89.808 1.00 44.72 ATOM 46 CE LYS A 141 25.875 2.011 91.067 1.00 46.20 ATOM 47 NZ LYS A 141 25.219 2.534 92.287 1.00 46.19 ATOM 48 N TYR A 142 24.611 1.673 84.126 1.00 26.49 ATOM 49 CA TYR A 142 23.787 1.889 82.909 1.00 27.27 ATOM 50 C TYR A 142 22.702 0.816 82.783 1.00 28.43 ATOM 51 O TYR A 142 22.722 -0.175 83.538 1.00 29.61 ATOM 52 CB TYR A 142 24.672 1.875 81.662 1.00 28.52 ATOM 53 CG TYR A 142 24.913 0.504 81.084 1.00 29.82 ATOM 54 CD1 TYR A 142 25.575 -0.471 81.808 1.00 32.92 ATOM 55 CD2 TYR A 142 24.480 0.182 79.809 1.00 32.24 ATOM 56 CE1 TYR A 142 25.799 -1.733 81.283 1.00 35.26 ATOM 57 CE2 TYR A 142 24.697 -1.073 79.268 1.00 31.95 ATOM 58 CZ TYR A 142 25.359 -2.035 80.008 1.00 35.86 ATOM 59 OH TYR A 142 25.577 -3.272 79.479 1.00 37.29 ATOM 60 N HIS A 143 21.749 1.065 81.881 1.00 26.94 ATOM 61 CA HIS A 143 20.653 0.113 81.565 1.00 29.06 ATOM 62 C HIS A 143 21.028 -0.653 80.297 1.00 29.03 ATOM 63 O HIS A 143 21.145 -0.012 79.238 1.00 27.06 ATOM 64 CB HIS A 143 19.334 0.865 81.367 1.00 26.95 ATOM 65 CG HIS A 143 18.907 1.579 82.598 1.00 29.38 ATOM 66 ND1 HIS A 143 17.971 1.060 83.459 1.00 27.88 ATOM 67 CD2 HIS A 143 19.309 2.746 83.134 1.00 28.23 ATOM 68 CE1 HIS A 143 17.815 1.872 84.478 1.00 31.99 ATOM 69 NE2 HIS A 143 18.613 2.909 84.293 1.00 25.67 ATOM 70 N PRO A 144 21.197 -1.991 80.352 1.00 31.79 ATOM 71 CA PRO A 144 21.559 -2.783 79.175 1.00 32.40 ATOM 72 C PRO A 144 20.370 -3.017 78.230 1.00 31.90 ATOM 73 O PRO A 144 20.599 -3.400 77.101 1.00 33.58 ATOM 74 CB PRO A 144 21.986 -4.143 79.752 1.00 33.71 ATOM 75 CG PRO A 144 22.038 -3.941 81.254 1.00 33.61 ATOM 76 CD PRO A 144 21.070 -2.816 81.548 1.00 30.97 ATOM 77 N CYS A 145 19.149 -2.750 78.702 1.00 27.78 ATOM 78 CA CYS A 145 17.925 -2.986 77.892 1.00 31.24 ATOM 79 C CYS A 145 17.193 -1.670 77.615 1.00 30.99 ATOM 80 O CYS A 145 17.424 -0.688 78.344 1.00 29.34 ATOM 81 CB CYS A 145 16.999 -3.980 78.579 1.00 30.97 ATOM 82 SG CYS A 145 17.700 -5.647 78.662 1.00 38.42 ATOM 83 N PHE A 146 16.388 -1.665 76.549 1.00 31.69 ATOM 84 CA PHE A 146 15.613 -0.482 76.101 1.00 33.38 ATOM 85 C PHE A 146 14.528 -0.119 77.114 1.00 37.64 ATOM 86 O PHE A 146 13.962 -1.018 77.765 1.00 36.97 ATOM 87 CB PHE A 146 14.831 -0.821 74.830 1.00 30.87 ATOM 88 CG PHE A 146 15.624 -0.841 73.550 1.00 32.30 ATOM 89 CD1 PHE A 146 16.056 0.338 72.966 1.00 31.29 ATOM 90 CD2 PHE A 146 15.912 -2.037 72.915 1.00 31.05 ATOM 91 CE1 PHE A 146 16.777 0.318 71.783 1.00 30.16 ATOM 92 CE2 PHE A 146 16.633 -2.055 71.732 1.00 33.13 ATOM 93 CZ PHE A 146 17.063 -0.878 71.169 1.00 28.18 ATOM 94 N TRP A 147 14.240 1.180 77.210 1.00 37.45 ATOM 95 CA TRP A 147 13.104 1.668 78.029 1.00 42.02 ATOM 96 C TRP A 147 11.891 1.671 77.095 1.00 45.99 ATOM 97 O TRP A 147 11.921 2.419 76.103 1.00 49.20 ATOM 98 CB TRP A 147 13.392 3.079 78.552 1.00 43.67 ATOM 99 CG TRP A 147 12.155 3.877 78.827 1.00 56.73 ATOM 100 CD1 TRP A 147 11.246 4.329 77.915 1.00 61.09 ATOM 101 CD2 TRP A 147 11.686 4.323 80.111 1.00 60.88 ATOM 102 NE1 TRP A 147 10.247 5.023 78.541 1.00 65.53 ATOM 103 CE2 TRP A 147 10.488 5.033 79.889 1.00 64.16 ATOM 104 CE3 TRP A 147 12.159 4.191 81.420 1.00 59.29 ATOM 105 CZ2 TRP A 147 9.764 5.613 80.929 1.00 62.54 ATOM 106 CZ3 TRP A 147 11.440 4.759 82.447 1.00 67.24 ATOM 107 CH2 TRP A 147 10.262 5.463 82.202 1.00 66.33 ATOM 108 N ILE A 148 10.885 0.840 77.378 1.00 49.19 ATOM 109 CA ILE A 148 9.694 0.763 76.482 1.00 51.61 ATOM 110 C ILE A 148 8.420 0.616 77.321 1.00 53.21 ATOM 111 O ILE A 148 8.451 -0.120 78.320 1.00 46.91 ATOM 112 CB ILE A 148 9.864 -0.385 75.466 1.00 51.06 ATOM 113 CG1 ILE A 148 8.711 -0.446 74.462 1.00 60.25 ATOM 114 CG2 ILE A 148 10.068 -1.712 76.178 1.00 53.09 ATOM 115 CD1 ILE A 148 8.931 -1.428 73.335 1.00 61.83 ATOM 116 N ASP A 149 7.328 1.239 76.870 1.00 61.19 ATOM 117 CA ASP A 149 6.008 1.173 77.556 1.00 66.17 ATOM 118 C ASP A 149 6.103 1.682 79.000 1.00 59.09 ATOM 119 O ASP A 149 5.508 1.042 79.885 1.00 65.09 ATOM 120 CB ASP A 149 5.365 -0.210 77.425 1.00 71.93 ATOM 121 CG ASP A 149 5.147 -0.625 75.981 1.00 77.62 ATOM 122 OD1 ASP A 149 4.719 0.233 75.187 1.00 88.74 ATOM 123 OD2 ASP A 149 5.421 -1.797 75.661 1.00 79.53 ATOM 124 N GLY A 150 6.854 2.765 79.223 1.00 51.84 ATOM 125 CA GLY A 150 6.945 3.409 80.549 1.00 47.18 ATOM 126 C GLY A 150 7.948 2.800 81.518 1.00 48.16 ATOM 127 O GLY A 150 7.966 3.260 82.673 1.00 42.25 ATOM 128 N GLN A 151 8.753 1.817 81.101 1.00 44.62 ATOM 129 CA GLN A 151 9.741 1.243 82.058 1.00 48.62 ATOM 130 C GLN A 151 10.934 0.616 81.326 1.00 42.09 ATOM 131 O GLN A 151 10.837 0.397 80.114 1.00 40.13 ATOM 132 CB GLN A 151 9.070 0.256 83.017 1.00 55.17 ATOM 133 CG GLN A 151 8.473 -0.964 82.333 1.00 59.51 ATOM 134 CD GLN A 151 7.608 -1.756 83.282 1.00 64.89 ATOM 135 OE1 GLN A 151 7.429 -2.962 83.132 1.00 69.38 ATOM 136 NE2 GLN A 151 7.066 -1.077 84.279 1.00 57.68 ATOM 137 N TYR A 152 12.039 0.398 82.046 1.00 38.06 ATOM 138 CA TYR A 152 13.250 -0.248 81.476 1.00 34.82 ATOM 139 C TYR A 152 13.054 -1.766 81.528 1.00 36.08 ATOM 140 O TYR A 152 12.715 -2.270 82.589 1.00 43.16 ATOM 141 CB TYR A 152 14.484 0.137 82.294 1.00 34.53 ATOM 142 CG TYR A 152 15.085 1.474 81.949 1.00 33.65 ATOM 143 CD1 TYR A 152 15.805 1.649 80.780 1.00 34.86 ATOM 144 CD2 TYR A 152 14.952 2.561 82.796 1.00 32.57 ATOM 145 CE1 TYR A 152 16.369 2.870 80.455 1.00 33.22 ATOM 146 CE2 TYR A 152 15.509 3.790 82.487 1.00 35.62 ATOM 147 CZ TYR A 152 16.219 3.945 81.311 1.00 35.65 ATOM 148 OH TYR A 152 16.775 5.149 80.995 1.00 34.17 ATOM 149 N LEU A 153 13.277 -2.472 80.421 1.00 38.02 ATOM 150 CA LEU A 153 13.089 -3.948 80.427 1.00 37.80 ATOM 151 C LEU A 153 14.042 -4.593 81.443 1.00 39.82 ATOM 152 O LEU A 153 13.620 -5.539 82.131 1.00 43.55 ATOM 153 CB LEU A 153 13.353 -4.475 79.015 1.00 39.70 ATOM 154 CG LEU A 153 12.307 -4.088 77.972 1.00 45.37 ATOM 155 CD1 LEU A 153 12.738 -4.523 76.581 1.00 46.11 ATOM 156 CD2 LEU A 153 10.953 -4.683 78.322 1.00 47.75 ATOM 157 N CYS A 154 15.261 -4.061 81.552 1.00 38.01 ATOM 158 CA CYS A 154 16.327 -4.611 82.434 1.00 35.17 ATOM 159 C CYS A 154 15.988 -4.565 83.933 1.00 38.95 ATOM 160 O CYS A 154 16.256 -5.579 84.603 1.00 40.66 ATOM 161 CB CYS A 154 17.637 -3.870 82.196 1.00 33.60 ATOM 162 SG CYS A 154 17.414 -2.093 81.930 1.00 32.53 ATOM 163 N CYS A 155 15.396 -3.478 84.444 1.00 35.74 ATOM 164 CA CYS A 155 15.184 -3.402 85.919 1.00 34.02 ATOM 165 C CYS A 155 13.775 -2.942 86.314 1.00 37.57 ATOM 166 O CYS A 155 13.569 -2.731 87.526 1.00 42.24 ATOM 167 CB CYS A 155 16.177 -2.429 86.536 1.00 34.29 ATOM 168 SG CYS A 155 15.987 -0.743 85.906 1.00 29.62 ATOM 169 N SER A 156 12.883 -2.758 85.335 1.00 35.87 ATOM 170 CA SER A 156 11.460 -2.367 85.526 1.00 37.69 ATOM 171 C SER A 156 11.316 -0.997 86.186 1.00 36.77 ATOM 172 O SER A 156 10.168 -0.678 86.493 1.00 39.35 ATOM 173 CB SER A 156 10.684 -3.403 86.318 1.00 42.09 ATOM 174 OG SER A 156 10.756 -4.677 85.684 1.00 42.68 ATOM 175 N GLN A 157 12.388 -0.205 86.356 1.00 35.72 ATOM 176 CA GLN A 157 12.295 1.176 86.915 1.00 36.17 ATOM 177 C GLN A 157 11.548 2.090 85.915 1.00 39.01 ATOM 178 O GLN A 157 11.605 1.844 84.699 1.00 39.04 ATOM 179 CB GLN A 157 13.674 1.725 87.271 1.00 36.34 ATOM 180 CG GLN A 157 14.405 0.976 88.381 1.00 35.01 ATOM 181 CD GLN A 157 15.682 1.688 88.774 1.00 34.32 ATOM 182 OE1 GLN A 157 15.680 2.627 89.566 1.00 41.71 ATOM 183 NE2 GLN A 157 16.810 1.256 88.239 1.00 38.63 ATOM 184 N THR A 158 10.824 3.096 86.407 1.00 41.06 ATOM 185 CA THR A 158 9.831 3.877 85.620 1.00 47.54 ATOM 186 C THR A 158 10.170 5.370 85.615 1.00 48.25 ATOM 187 O THR A 158 9.238 6.163 85.411 1.00 61.93 ATOM 188 CB THR A 158 8.411 3.735 86.193 1.00 52.22 ATOM 189 OG1 THR A 158 8.368 4.461 87.420 1.00 49.35 ATOM 190 CG2 THR A 158 7.992 2.300 86.428 1.00 56.12 ATOM 191 N ALA A 159 11.413 5.748 85.913 1.00 46.60 ATOM 192 CA ALA A 159 11.968 7.086 85.609 1.00 44.29 ATOM 193 C ALA A 159 13.071 6.901 84.546 1.00 46.88 ATOM 194 O ALA A 159 14.046 6.167 84.812 1.00 42.67 ATOM 195 CB ALA A 159 12.450 7.747 86.879 1.00 41.45 ATOM 196 N LYS A 160 12.906 7.507 83.365 1.00 46.62 ATOM 197 CA LYS A 160 13.883 7.457 82.240 1.00 45.35 ATOM 198 C LYS A 160 15.280 7.831 82.734 1.00 38.27 ATOM 199 O LYS A 160 16.241 7.350 82.136 1.00 36.98 ATOM 200 CB LYS A 160 13.469 8.389 81.099 1.00 48.20 ATOM 201 CG LYS A 160 12.474 7.777 80.127 1.00 56.46 ATOM 202 CD LYS A 160 12.154 8.659 78.935 1.00 59.98 ATOM 203 CE LYS A 160 10.844 8.296 78.267 1.00 64.08 ATOM 204 NZ LYS A 160 10.132 9.501 77.773 1.00 70.49 ATOM 205 N ASN A 161 15.365 8.642 83.786 1.00 39.41 ATOM 206 CA ASN A 161 16.629 9.118 84.415 1.00 42.94 ATOM 207 C ASN A 161 16.976 8.258 85.648 1.00 36.64 ATOM 208 O ASN A 161 17.938 8.602 86.375 1.00 35.42 ATOM 209 CB ASN A 161 16.523 10.606 84.762 1.00 44.59 ATOM 210 CG ASN A 161 15.365 10.901 85.694 1.00 48.34 ATOM 211 OD1 ASN A 161 14.628 9.998 86.074 1.00 52.47 ATOM 212 ND2 ASN A 161 15.181 12.158 86.056 1.00 48.62 ATOM 213 N ALA A 162 16.261 7.155 85.878 1.00 36.19 ATOM 214 CA ALA A 162 16.609 6.190 86.943 1.00 35.87 ATOM 215 C ALA A 162 18.099 5.821 86.834 1.00 37.16 ATOM 216 O ALA A 162 18.640 5.603 85.698 1.00 35.03 ATOM 217 CB ALA A 162 15.728 4.960 86.867 1.00 36.10 ATOM 218 N MET A 163 18.750 5.698 87.984 1.00 36.34 ATOM 219 CA MET A 163 20.126 5.170 88.061 1.00 36.32 ATOM 220 C MET A 163 20.165 3.798 87.371 1.00 33.98 ATOM 221 O MET A 163 19.206 3.051 87.478 1.00 33.10 ATOM 222 CB MET A 163 20.557 5.070 89.518 1.00 38.33 ATOM 223 CG MET A 163 21.894 4.438 89.704 1.00 40.77 ATOM 224 SD MET A 163 22.291 4.467 91.447 1.00 47.02 ATOM 225 CE MET A 163 23.105 6.061 91.563 1.00 49.11 ATOM 226 N GLY A 164 21.264 3.524 86.657 1.00 34.99 ATOM 227 CA GLY A 164 21.480 2.254 85.938 1.00 33.22 ATOM 228 C GLY A 164 21.471 1.060 86.877 1.00 33.34 ATOM 229 O GLY A 164 22.054 1.164 87.969 1.00 33.70 ATOM 230 N CYS A 165 20.836 -0.036 86.452 1.00 33.61 ATOM 231 CA CYS A 165 20.723 -1.280 87.259 1.00 32.44 ATOM 232 C CYS A 165 21.979 -2.150 87.129 1.00 34.48 ATOM 233 O CYS A 165 22.114 -3.095 87.926 1.00 32.20 ATOM 234 CB CYS A 165 19.548 -2.110 86.767 1.00 33.28 ATOM 235 SG CYS A 165 19.713 -2.579 85.026 1.00 29.54 ATOM 236 N GLN A 166 22.841 -1.869 86.149 1.00 34.26 ATOM 237 CA GLN A 166 24.059 -2.701 85.949 1.00 39.09 ATOM 238 C GLN A 166 25.304 -1.808 85.942 1.00 36.56 ATOM 239 O GLN A 166 25.209 -0.661 85.474 1.00 34.15 ATOM 240 CB GLN A 166 23.926 -3.564 84.691 1.00 45.86 ATOM 241 CG GLN A 166 25.149 -4.417 84.377 1.00 54.69 ATOM 242 CD GLN A 166 25.580 -5.296 85.526 1.00 65.52 ATOM 243 OE1 GLN A 166 25.657 -4.861 86.673 1.00 71.27 ATOM 244 NE2 GLN A 166 25.882 -6.547 85.221 1.00 61.41 ATOM 245 N ILE A 167 26.407 -2.310 86.501 1.00 35.91 ATOM 246 CA ILE A 167 27.679 -1.533 86.567 1.00 44.33 ATOM 247 C ILE A 167 28.410 -1.666 85.226 1.00 45.04 ATOM 248 O ILE A 167 28.165 -2.653 84.508 1.00 41.59 ATOM 249 CB ILE A 167 28.543 -2.033 87.742 1.00 49.85 ATOM 250 CG1 ILE A 167 29.412 -0.922 88.335 1.00 59.21 ATOM 251 CG2 ILE A 167 29.365 -3.246 87.336 1.00 53.22 ATOM 252 CD1 ILE A 167 28.668 0.006 89.267 1.00 62.08 ATOM 253 N LEU A 168 29.228 -0.665 84.892 1.00 45.92 ATOM 254 CA LEU A 168 30.049 -0.635 83.646 1.00 50.26 ATOM 255 C LEU A 168 31.453 -1.180 83.950 1.00 60.30 ATOM 256 O LEU A 168 31.983 -0.853 85.037 1.00 58.06 ATOM 257 CB LEU A 168 30.186 0.808 83.158 1.00 48.88 ATOM 258 CG LEU A 168 29.011 1.395 82.396 1.00 49.72 ATOM 259 CD1 LEU A 168 29.299 2.840 82.056 1.00 52.10 ATOM 260 CD2 LEU A 168 28.731 0.603 81.138 1.00 51.65 ATOM 261 N GLU A 169 32.069 -1.892 82.999 1.00 70.61 ATOM 262 CA GLU A 169 33.448 -2.455 83.122 1.00 77.07 ATOM 263 C GLU A 169 34.488 -1.459 82.590 1.00 71.15 ATOM 264 O GLU A 169 34.255 -0.655 81.692 1.00 67.15 ATOM 265 CB GLU A 169 33.543 -3.784 82.372 1.00 87.50 ATOM 266 CG GLU A 169 32.561 -4.825 82.880 1.00 97.94 ATOM 267 CD GLU A 169 32.742 -6.219 82.303 1.00104.68 ATOM 268 OE1 GLU A 169 33.440 -6.351 81.270 1.00102.63 ATOM 269 OE2 GLU A 169 32.183 -7.169 82.891 1.00110.54 ATOM 270 ZN ZN A 203 17.847 -1.078 84.213 1.00 30.34 TER