HEADER TRANSFERASE 31-DEC-69 6YYK TITLE Crystal Structure of 1,5-dimethylindoline-2,3-dione covalently bound TITLE 2 to the PH domain of Bruton's tyrosine kinase mutant R28C COMPND MOL_ID: 1; COMPND 2 MOLECULE: Tyrosine-protein kinase BTK; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.10.2; COMPND 5 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.04 ANGSTORMS DBREF 6YYK A 2 170 UNP Q06187 BTK_HUMAN 2 170 SEQRES 1 A 33 ASP LEU VAL GLN LYS TYR HIS PRO CYS PHE TRP ILE ASP SEQRES 2 A 33 GLY GLN TYR LEU CYS CYS SER GLN THR ALA LYS ASN ALA SEQRES 3 A 33 MET GLY CYS GLN ILE LEU GLU ATOM 1 N ASP A 137 -1.283 0.511 30.027 1.00 90.88 ATOM 2 CA ASP A 137 -1.462 -0.732 30.828 1.00 86.32 ATOM 3 C ASP A 137 -0.167 -1.119 31.564 1.00 76.37 ATOM 4 O ASP A 137 -0.111 -2.247 32.069 1.00 88.64 ATOM 5 CB ASP A 137 -1.995 -1.868 29.946 1.00 94.67 ATOM 6 CG ASP A 137 -3.345 -1.579 29.303 1.00100.93 ATOM 7 OD1 ASP A 137 -4.340 -1.495 30.051 1.00103.68 ATOM 8 OD2 ASP A 137 -3.393 -1.440 28.058 1.00 91.64 ATOM 9 N LEU A 138 0.827 -0.236 31.681 1.00 70.46 ATOM 10 CA LEU A 138 2.155 -0.625 32.243 1.00 70.02 ATOM 11 C LEU A 138 1.956 -1.191 33.654 1.00 66.51 ATOM 12 O LEU A 138 1.180 -0.595 34.402 1.00 70.20 ATOM 13 CB LEU A 138 3.125 0.566 32.257 1.00 69.39 ATOM 14 CG LEU A 138 3.605 1.070 30.894 1.00 74.26 ATOM 15 CD1 LEU A 138 4.481 2.305 31.057 1.00 75.53 ATOM 16 CD2 LEU A 138 4.354 -0.005 30.116 1.00 73.15 ATOM 17 N VAL A 139 2.629 -2.295 34.003 1.00 57.55 ATOM 18 CA VAL A 139 2.417 -3.007 35.297 1.00 61.00 ATOM 19 C VAL A 139 3.584 -2.709 36.235 1.00 58.78 ATOM 20 O VAL A 139 4.580 -2.237 35.757 1.00 56.54 ATOM 21 CB VAL A 139 2.204 -4.525 35.122 1.00 65.77 ATOM 22 CG1 VAL A 139 0.988 -4.812 34.248 1.00 66.36 ATOM 23 CG2 VAL A 139 3.445 -5.234 34.585 1.00 65.63 ATOM 24 N GLN A 140 3.421 -2.975 37.532 1.00 67.26 ATOM 25 CA GLN A 140 4.376 -2.622 38.617 1.00 76.47 ATOM 26 C GLN A 140 4.919 -3.912 39.231 1.00 77.78 ATOM 27 O GLN A 140 5.783 -3.839 40.158 1.00 59.14 ATOM 28 CB GLN A 140 3.665 -1.811 39.708 1.00 85.05 ATOM 29 CG GLN A 140 3.513 -0.332 39.391 1.00 88.90 ATOM 30 CD GLN A 140 2.926 0.409 40.570 1.00105.42 ATOM 31 OE1 GLN A 140 2.318 -0.192 41.459 1.00114.04 ATOM 32 NE2 GLN A 140 3.110 1.723 40.590 1.00 95.11 ATOM 33 N LYS A 141 4.387 -5.046 38.763 1.00 80.28 ATOM 34 CA LYS A 141 4.779 -6.401 39.222 1.00 85.25 ATOM 35 C LYS A 141 5.229 -7.221 37.999 1.00 74.21 ATOM 36 O LYS A 141 4.784 -6.913 36.876 1.00 52.80 ATOM 37 CB LYS A 141 3.620 -7.032 40.006 1.00 95.58 ATOM 38 CG LYS A 141 3.300 -6.380 41.351 1.00100.53 ATOM 39 CD LYS A 141 2.349 -7.194 42.235 1.00105.93 ATOM 40 CE LYS A 141 2.870 -7.466 43.637 1.00103.66 ATOM 41 NZ LYS A 141 2.244 -8.668 44.243 1.00 98.32 ATOM 42 N TYR A 142 6.079 -8.230 38.220 1.00 65.28 ATOM 43 CA TYR A 142 6.594 -9.141 37.172 1.00 62.21 ATOM 44 C TYR A 142 7.087 -10.454 37.791 1.00 60.54 ATOM 45 O TYR A 142 7.414 -10.490 38.998 1.00 57.47 ATOM 46 CB TYR A 142 7.719 -8.433 36.411 1.00 60.19 ATOM 47 CG TYR A 142 9.101 -8.615 36.986 1.00 59.79 ATOM 48 CD1 TYR A 142 9.396 -8.326 38.313 1.00 67.90 ATOM 49 CD2 TYR A 142 10.144 -9.026 36.175 1.00 59.67 ATOM 50 CE1 TYR A 142 10.679 -8.474 38.826 1.00 65.01 ATOM 51 CE2 TYR A 142 11.427 -9.169 36.669 1.00 55.75 ATOM 52 CZ TYR A 142 11.699 -8.900 37.994 1.00 62.54 ATOM 53 OH TYR A 142 12.972 -9.087 38.440 1.00 60.49 ATOM 54 N HIS A 143 7.174 -11.500 36.963 1.00 65.11 ATOM 55 CA HIS A 143 7.809 -12.803 37.304 1.00 62.21 ATOM 56 C HIS A 143 9.286 -12.721 36.943 1.00 63.09 ATOM 57 O HIS A 143 9.658 -12.666 35.774 1.00 69.70 ATOM 58 CB HIS A 143 7.071 -13.944 36.612 1.00 56.06 ATOM 59 CG HIS A 143 5.625 -13.947 36.950 1.00 55.29 ATOM 60 ND1 HIS A 143 5.127 -14.510 38.115 1.00 49.08 ATOM 61 CD2 HIS A 143 4.572 -13.422 36.292 1.00 59.25 ATOM 62 CE1 HIS A 143 3.825 -14.323 38.152 1.00 60.35 ATOM 63 NE2 HIS A 143 3.452 -13.649 37.045 1.00 55.66 ATOM 64 N PRO A 144 10.181 -12.657 37.939 1.00 62.89 ATOM 65 CA PRO A 144 11.610 -12.644 37.657 1.00 62.69 ATOM 66 C PRO A 144 12.099 -13.955 37.012 1.00 60.23 ATOM 67 O PRO A 144 13.154 -13.931 36.446 1.00 71.95 ATOM 68 CB PRO A 144 12.281 -12.449 39.031 1.00 60.96 ATOM 69 CG PRO A 144 11.157 -12.041 39.958 1.00 64.10 ATOM 70 CD PRO A 144 9.881 -12.616 39.376 1.00 63.20 ATOM 71 N CYS A 145 11.356 -15.059 37.128 1.00 66.43 ATOM 72 CA CYS A 145 11.765 -16.405 36.631 1.00 60.86 ATOM 73 C CYS A 145 10.904 -16.807 35.432 1.00 53.52 ATOM 74 O CYS A 145 9.897 -16.135 35.141 1.00 54.07 ATOM 75 CB CYS A 145 11.697 -17.453 37.735 1.00 56.37 ATOM 76 SG CYS A 145 12.934 -17.212 39.049 1.00 65.93 ATOM 77 N PHE A 146 11.299 -17.885 34.780 1.00 62.86 ATOM 78 CA PHE A 146 10.573 -18.331 33.576 1.00 64.86 ATOM 79 C PHE A 146 9.329 -19.111 33.968 1.00 68.45 ATOM 80 O PHE A 146 9.238 -19.682 35.040 1.00 68.33 ATOM 81 CB PHE A 146 11.394 -19.333 32.758 1.00 56.67 ATOM 82 CG PHE A 146 12.541 -18.780 31.961 1.00 49.18 ATOM 83 CD1 PHE A 146 12.350 -18.282 30.693 1.00 50.26 ATOM 84 CD2 PHE A 146 13.820 -18.756 32.489 1.00 49.06 ATOM 85 CE1 PHE A 146 13.407 -17.767 29.971 1.00 50.27 ATOM 86 CE2 PHE A 146 14.876 -18.242 31.763 1.00 51.45 ATOM 87 CZ PHE A 146 14.666 -17.743 30.512 1.00 48.62 ATOM 88 N TRP A 147 8.367 -19.023 33.078 1.00 68.29 ATOM 89 CA TRP A 147 7.176 -19.885 33.066 1.00 74.94 ATOM 90 C TRP A 147 7.654 -21.142 32.340 1.00 76.92 ATOM 91 O TRP A 147 8.004 -21.040 31.182 1.00 77.17 ATOM 92 CB TRP A 147 6.076 -19.177 32.292 1.00 83.70 ATOM 93 CG TRP A 147 4.990 -20.068 31.788 1.00 94.76 ATOM 94 CD1 TRP A 147 4.919 -20.675 30.573 1.00105.22 ATOM 95 CD2 TRP A 147 3.780 -20.411 32.470 1.00 92.01 ATOM 96 NE1 TRP A 147 3.759 -21.386 30.458 1.00101.17 ATOM 97 CE2 TRP A 147 3.043 -21.243 31.608 1.00 94.38 ATOM 98 CE3 TRP A 147 3.267 -20.121 33.732 1.00 92.70 ATOM 99 CZ2 TRP A 147 1.813 -21.777 31.966 1.00 98.57 ATOM 100 CZ3 TRP A 147 2.042 -20.639 34.078 1.00103.62 ATOM 101 CH2 TRP A 147 1.329 -21.458 33.210 1.00107.50 ATOM 102 N ILE A 148 7.792 -22.243 33.060 1.00 76.46 ATOM 103 CA ILE A 148 8.266 -23.555 32.527 1.00 80.17 ATOM 104 C ILE A 148 7.356 -24.683 33.036 1.00 80.44 ATOM 105 O ILE A 148 7.139 -24.779 34.270 1.00 72.82 ATOM 106 CB ILE A 148 9.739 -23.802 32.898 1.00 79.15 ATOM 107 CG1 ILE A 148 10.680 -22.991 32.008 1.00 98.30 ATOM 108 CG2 ILE A 148 10.069 -25.281 32.817 1.00 82.89 ATOM 109 CD1 ILE A 148 12.165 -23.251 32.234 1.00105.11 ATOM 110 N ASP A 149 6.896 -25.539 32.116 1.00 84.51 ATOM 111 CA ASP A 149 6.086 -26.753 32.412 1.00 85.14 ATOM 112 C ASP A 149 4.861 -26.329 33.229 1.00 88.19 ATOM 113 O ASP A 149 4.699 -26.855 34.341 1.00 85.48 ATOM 114 CB ASP A 149 6.890 -27.821 33.170 1.00 84.54 ATOM 115 CG ASP A 149 8.009 -28.481 32.376 1.00 92.58 ATOM 116 OD1 ASP A 149 7.729 -28.934 31.242 1.00 94.61 ATOM 117 OD2 ASP A 149 9.157 -28.550 32.904 1.00 84.36 ATOM 118 N GLY A 150 4.087 -25.359 32.729 1.00 89.20 ATOM 119 CA GLY A 150 2.751 -25.000 33.249 1.00 83.81 ATOM 120 C GLY A 150 2.759 -24.090 34.477 1.00 80.43 ATOM 121 O GLY A 150 1.661 -23.715 34.928 1.00 82.09 ATOM 122 N GLN A 151 3.920 -23.721 35.018 1.00 86.11 ATOM 123 CA GLN A 151 4.008 -22.837 36.214 1.00 87.80 ATOM 124 C GLN A 151 5.161 -21.834 36.037 1.00 83.16 ATOM 125 O GLN A 151 6.126 -22.169 35.336 1.00 74.29 ATOM 126 CB GLN A 151 4.170 -23.684 37.481 1.00 85.24 ATOM 127 CG GLN A 151 5.451 -24.517 37.516 1.00 91.63 ATOM 128 CD GLN A 151 5.634 -25.294 38.801 1.00 98.45 ATOM 129 OE1 GLN A 151 6.738 -25.720 39.140 1.00100.58 ATOM 130 NE2 GLN A 151 4.552 -25.479 39.542 1.00100.11 ATOM 131 N TYR A 152 5.050 -20.645 36.643 1.00 72.23 ATOM 132 CA TYR A 152 6.197 -19.750 36.932 1.00 68.58 ATOM 133 C TYR A 152 7.090 -20.478 37.939 1.00 72.52 ATOM 134 O TYR A 152 6.535 -21.138 38.830 1.00 71.60 ATOM 135 CB TYR A 152 5.709 -18.378 37.412 1.00 67.22 ATOM 136 CG TYR A 152 5.187 -17.524 36.289 1.00 65.89 ATOM 137 CD1 TYR A 152 6.046 -17.048 35.307 1.00 68.83 ATOM 138 CD2 TYR A 152 3.837 -17.238 36.154 1.00 68.94 ATOM 139 CE1 TYR A 152 5.583 -16.305 34.227 1.00 60.14 ATOM 140 CE2 TYR A 152 3.355 -16.494 35.081 1.00 65.33 ATOM 141 CZ TYR A 152 4.233 -16.025 34.111 1.00 66.63 ATOM 142 OH TYR A 152 3.807 -15.287 33.041 1.00 60.24 ATOM 143 N LEU A 153 8.415 -20.412 37.779 1.00 67.83 ATOM 144 CA LEU A 153 9.380 -21.043 38.723 1.00 69.18 ATOM 145 C LEU A 153 9.572 -20.127 39.931 1.00 69.83 ATOM 146 O LEU A 153 10.209 -20.555 40.923 1.00 68.49 ATOM 147 CB LEU A 153 10.718 -21.284 38.024 1.00 71.51 ATOM 148 CG LEU A 153 10.720 -22.377 36.960 1.00 82.07 ATOM 149 CD1 LEU A 153 11.843 -22.135 35.963 1.00 84.73 ATOM 150 CD2 LEU A 153 10.851 -23.756 37.592 1.00 83.44 ATOM 151 N CYS A 154 9.111 -18.883 39.824 1.00 69.84 ATOM 152 CA CYS A 154 9.251 -17.882 40.905 1.00 73.61 ATOM 153 C CYS A 154 8.107 -18.085 41.923 1.00 75.67 ATOM 154 O CYS A 154 8.398 -18.068 43.118 1.00 69.11 ATOM 155 CB CYS A 154 9.352 -16.463 40.343 1.00 65.54 ATOM 156 SG CYS A 154 8.287 -16.166 38.914 1.00 65.54 ATOM 157 N CYS A 155 6.869 -18.336 41.489 1.00 69.63 ATOM 158 CA CYS A 155 5.669 -18.280 42.373 1.00 74.15 ATOM 159 C CYS A 155 4.690 -19.447 42.145 1.00 72.40 ATOM 160 O CYS A 155 3.561 -19.336 42.607 1.00 74.87 ATOM 161 CB CYS A 155 4.936 -16.971 42.116 1.00 66.94 ATOM 162 SG CYS A 155 4.283 -16.880 40.426 1.00 74.46 ATOM 163 N SER A 156 5.066 -20.473 41.381 1.00 75.84 ATOM 164 CA SER A 156 4.253 -21.680 41.043 1.00 74.94 ATOM 165 C SER A 156 2.871 -21.322 40.466 1.00 72.42 ATOM 166 O SER A 156 2.087 -22.253 40.157 1.00 68.78 ATOM 167 CB SER A 156 4.162 -22.573 42.235 1.00 66.46 ATOM 168 OG SER A 156 5.435 -22.650 42.860 1.00 74.11 ATOM 169 N GLN A 157 2.576 -20.038 40.256 1.00 68.22 ATOM 170 CA GLN A 157 1.275 -19.625 39.671 1.00 73.21 ATOM 171 C GLN A 157 1.201 -20.249 38.283 1.00 73.19 ATOM 172 O GLN A 157 2.253 -20.223 37.615 1.00 75.34 ATOM 173 CB GLN A 157 1.162 -18.107 39.605 1.00 76.37 ATOM 174 CG GLN A 157 1.025 -17.444 40.969 1.00 81.22 ATOM 175 CD GLN A 157 0.386 -16.083 40.835 1.00 88.11 ATOM 176 OE1 GLN A 157 -0.795 -15.970 40.505 1.00 92.95 ATOM 177 NE2 GLN A 157 1.162 -15.038 41.083 1.00 87.43 ATOM 178 N THR A 158 0.046 -20.798 37.886 1.00 73.21 ATOM 179 CA THR A 158 -0.103 -21.614 36.645 1.00 77.67 ATOM 180 C THR A 158 -0.722 -20.799 35.496 1.00 73.17 ATOM 181 O THR A 158 -0.569 -21.217 34.348 1.00 79.83 ATOM 182 CB THR A 158 -0.866 -22.926 36.890 1.00 75.21 ATOM 183 OG1 THR A 158 -2.267 -22.681 36.981 1.00 77.33 ATOM 184 CG2 THR A 158 -0.402 -23.661 38.129 1.00 78.18 ATOM 185 N ALA A 159 -1.388 -19.681 35.752 1.00 70.16 ATOM 186 CA ALA A 159 -1.846 -18.775 34.673 1.00 76.65 ATOM 187 C ALA A 159 -0.617 -18.110 34.023 1.00 91.31 ATOM 188 O ALA A 159 0.327 -17.746 34.760 1.00 82.95 ATOM 189 CB ALA A 159 -2.808 -17.754 35.223 1.00 75.88 ATOM 190 N LYS A 160 -0.599 -17.984 32.692 1.00 92.31 ATOM 191 CA LYS A 160 0.523 -17.340 31.958 1.00 93.13 ATOM 192 C LYS A 160 0.460 -15.832 32.205 1.00 91.34 ATOM 193 O LYS A 160 1.518 -15.253 32.482 1.00 80.98 ATOM 194 CB LYS A 160 0.508 -17.671 30.460 1.00100.85 ATOM 195 CG LYS A 160 1.712 -18.481 29.988 1.00104.46 ATOM 196 CD LYS A 160 1.561 -19.154 28.629 1.00111.03 ATOM 197 CE LYS A 160 2.892 -19.390 27.935 1.00112.35 ATOM 198 NZ LYS A 160 2.790 -20.299 26.767 1.00114.25 ATOM 199 N ASN A 161 -0.739 -15.248 32.144 1.00 80.48 ATOM 200 CA ASN A 161 -0.984 -13.802 32.367 1.00 85.65 ATOM 201 C ASN A 161 -1.229 -13.540 33.867 1.00 88.45 ATOM 202 O ASN A 161 -1.810 -12.481 34.194 1.00 89.59 ATOM 203 CB ASN A 161 -2.137 -13.312 31.486 1.00 91.49 ATOM 204 CG ASN A 161 -3.462 -13.925 31.882 1.00100.98 ATOM 205 OD1 ASN A 161 -3.495 -15.022 32.439 1.00114.61 ATOM 206 ND2 ASN A 161 -4.551 -13.221 31.615 1.00107.23 ATOM 207 N ALA A 162 -0.804 -14.455 34.750 1.00 81.88 ATOM 208 CA ALA A 162 -0.860 -14.305 36.227 1.00 73.21 ATOM 209 C ALA A 162 -0.109 -13.046 36.664 1.00 74.91 ATOM 210 O ALA A 162 1.026 -12.850 36.194 1.00 76.20 ATOM 211 CB ALA A 162 -0.263 -15.503 36.926 1.00 70.01 ATOM 212 N MET A 163 -0.691 -12.289 37.600 1.00 76.90 ATOM 213 CA MET A 163 -0.084 -11.077 38.193 1.00 65.03 ATOM 214 C MET A 163 1.322 -11.441 38.658 1.00 66.57 ATOM 215 O MET A 163 1.477 -12.556 39.187 1.00 64.08 ATOM 216 CB MET A 163 -0.885 -10.535 39.377 1.00 72.06 ATOM 217 CG MET A 163 -0.500 -9.109 39.731 1.00 75.04 ATOM 218 SD MET A 163 -1.375 -8.553 41.197 1.00 79.42 ATOM 219 CE MET A 163 -2.093 -7.032 40.569 1.00 65.65 ATOM 220 N GLY A 164 2.281 -10.538 38.401 1.00 66.99 ATOM 221 CA GLY A 164 3.710 -10.660 38.736 1.00 63.52 ATOM 222 C GLY A 164 3.900 -10.836 40.225 1.00 64.73 ATOM 223 O GLY A 164 3.195 -10.175 41.008 1.00 81.38 ATOM 224 N CYS A 165 4.806 -11.718 40.609 1.00 59.25 ATOM 225 CA CYS A 165 4.989 -12.145 42.012 1.00 59.16 ATOM 226 C CYS A 165 5.977 -11.206 42.694 1.00 62.79 ATOM 227 O CYS A 165 6.264 -11.393 43.883 1.00 67.34 ATOM 228 CB CYS A 165 5.511 -13.571 42.041 1.00 65.16 ATOM 229 SG CYS A 165 7.066 -13.760 41.129 1.00 63.82 ATOM 230 N GLN A 166 6.526 -10.266 41.939 1.00 67.27 ATOM 231 CA GLN A 166 7.647 -9.407 42.382 1.00 72.89 ATOM 232 C GLN A 166 7.341 -7.999 41.885 1.00 75.21 ATOM 233 O GLN A 166 6.765 -7.876 40.786 1.00 69.33 ATOM 234 CB GLN A 166 8.957 -9.972 41.841 1.00 79.77 ATOM 235 CG GLN A 166 10.172 -9.131 42.181 1.00 85.41 ATOM 236 CD GLN A 166 10.488 -9.195 43.653 1.00 95.02 ATOM 237 OE1 GLN A 166 10.851 -8.197 44.270 1.00112.72 ATOM 238 NE2 GLN A 166 10.331 -10.375 44.233 1.00 92.63 ATOM 239 N ILE A 167 7.654 -6.987 42.690 1.00 81.12 ATOM 240 CA ILE A 167 7.328 -5.569 42.358 1.00 86.30 ATOM 241 C ILE A 167 8.601 -4.922 41.816 1.00 77.22 ATOM 242 O ILE A 167 9.675 -5.211 42.353 1.00 76.03 ATOM 243 CB ILE A 167 6.721 -4.825 43.565 1.00 93.69 ATOM 244 CG1 ILE A 167 6.437 -3.346 43.258 1.00103.03 ATOM 245 CG2 ILE A 167 7.582 -5.008 44.804 1.00 93.41 ATOM 246 CD1 ILE A 167 4.957 -2.986 43.155 1.00108.40 ATOM 247 N LEU A 168 8.458 -4.108 40.770 1.00 81.76 ATOM 248 CA LEU A 168 9.570 -3.470 40.011 1.00 88.23 ATOM 249 C LEU A 168 10.183 -2.321 40.823 1.00 92.74 ATOM 250 O LEU A 168 9.399 -1.531 41.386 1.00 91.83 ATOM 251 CB LEU A 168 9.006 -2.958 38.683 1.00 85.25 ATOM 252 CG LEU A 168 8.533 -4.040 37.715 1.00 89.83 ATOM 253 CD1 LEU A 168 7.698 -3.448 36.580 1.00 88.67 ATOM 254 CD2 LEU A 168 9.720 -4.812 37.164 1.00 94.30 ATOM 255 N GLU A 169 11.524 -2.223 40.833 1.00102.37 ATOM 256 CA GLU A 169 12.349 -1.254 41.618 1.00 98.56 ATOM 257 C GLU A 169 12.851 -0.099 40.741 1.00 81.85 ATOM 258 O GLU A 169 12.098 0.612 40.090 1.00 93.11 ATOM 259 CB GLU A 169 13.598 -1.935 42.175 1.00103.87 ATOM 260 CG GLU A 169 13.329 -3.125 43.077 1.00104.21 ATOM 261 CD GLU A 169 14.618 -3.685 43.657 1.00112.11 ATOM 262 OE1 GLU A 169 15.115 -4.720 43.146 1.00109.57 ATOM 263 OE2 GLU A 169 15.146 -3.061 44.598 1.00113.59 ATOM 264 ZN ZN A 201 6.148 -15.201 39.662 1.00 57.44 TER