HEADER BLOOD CLOTTING 31-DEC-69 6ZUU TITLE Crystal structure of Thrombin in complex with compound30 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Prothrombin; COMPND 3 CHAIN: L; COMPND 4 EC: 3.4.21.5; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.94 ANGSTORMS DBREF 6ZUU L -5 17 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 L 27 ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SER SEQRES 2 L 27 LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER TYR SEQRES 3 L 27 ILE ATOM 1 N ALA L 1B 14.659 20.058 16.200 1.00 48.28 ATOM 2 CA ALA L 1B 15.676 20.854 15.388 1.00 45.03 ATOM 3 C ALA L 1B 17.040 20.191 15.551 1.00 41.53 ATOM 4 O ALA L 1B 17.792 20.200 14.642 1.00 39.03 ATOM 5 CB ALA L 1B 15.711 22.348 15.821 1.00 47.17 ATOM 6 N ASP L 1A 17.316 19.572 16.705 1.00 39.44 ATOM 7 CA ASP L 1A 18.589 18.895 16.928 1.00 38.45 ATOM 8 C ASP L 1A 18.684 17.426 16.602 1.00 32.69 ATOM 9 O ASP L 1A 19.726 16.789 16.882 1.00 30.27 ATOM 10 CB ASP L 1A 18.925 19.013 18.408 1.00 44.03 ATOM 11 CG ASP L 1A 20.220 19.553 18.596 1.00 49.30 ATOM 12 OD1 ASP L 1A 20.637 20.308 17.668 1.00 54.09 ATOM 13 OD2 ASP L 1A 20.784 19.302 19.695 1.00 59.40 ATOM 14 N CYS L 1 17.631 16.857 16.037 1.00 29.71 ATOM 15 CA CYS L 1 17.609 15.383 15.887 1.00 28.44 ATOM 16 C CYS L 1 18.793 14.940 15.027 1.00 26.49 ATOM 17 O CYS L 1 19.251 15.671 14.099 1.00 25.46 ATOM 18 CB CYS L 1 16.218 14.920 15.298 1.00 28.32 ATOM 19 SG CYS L 1 15.944 15.408 13.560 1.00 27.40 ATOM 20 N GLY L 2 19.351 13.814 15.406 1.00 25.71 ATOM 21 CA GLY L 2 20.265 13.038 14.579 1.00 25.32 ATOM 22 C GLY L 2 21.646 13.633 14.528 1.00 25.25 ATOM 23 O GLY L 2 22.492 13.215 13.692 1.00 24.28 ATOM 24 N LEU L 3 21.908 14.571 15.431 1.00 25.56 ATOM 25 CA LEU L 3 23.245 15.180 15.610 1.00 25.87 ATOM 26 C LEU L 3 23.784 14.779 16.973 1.00 25.72 ATOM 27 O LEU L 3 23.257 15.168 18.022 1.00 25.36 ATOM 28 CB LEU L 3 23.142 16.677 15.554 1.00 28.26 ATOM 29 CG LEU L 3 22.670 17.200 14.210 1.00 28.55 ATOM 30 CD1 LEU L 3 22.345 18.691 14.336 1.00 30.34 ATOM 31 CD2 LEU L 3 23.686 16.909 13.130 1.00 28.56 ATOM 32 N ARG L 4 24.813 13.934 16.972 1.00 24.61 ATOM 33 CA ARG L 4 25.258 13.332 18.207 1.00 25.08 ATOM 34 C ARG L 4 26.167 14.250 19.006 1.00 25.37 ATOM 35 O ARG L 4 27.129 14.776 18.468 1.00 25.58 ATOM 36 CB ARG L 4 25.968 11.960 17.929 1.00 24.40 ATOM 37 CG ARG L 4 25.067 10.995 17.158 1.00 23.91 ATOM 38 CD ARG L 4 25.894 9.761 16.761 1.00 22.97 ATOM 39 NE ARG L 4 26.788 10.106 15.658 1.00 22.76 ATOM 40 CZ ARG L 4 27.717 9.302 15.142 1.00 23.08 ATOM 41 NH1 ARG L 4 27.945 8.052 15.630 1.00 23.76 ATOM 42 NH2 ARG L 4 28.480 9.782 14.195 1.00 23.74 ATOM 43 N PRO L 5 25.908 14.396 20.323 1.00 25.72 ATOM 44 CA PRO L 5 26.706 15.264 21.168 1.00 26.29 ATOM 45 C PRO L 5 28.181 14.932 21.144 1.00 26.40 ATOM 46 O PRO L 5 29.044 15.864 21.069 1.00 25.93 ATOM 47 CB PRO L 5 26.082 15.089 22.559 1.00 27.01 ATOM 48 CG PRO L 5 24.684 14.707 22.295 1.00 27.07 ATOM 49 CD PRO L 5 24.738 13.895 21.040 1.00 26.21 ATOM 50 N LEU L 6 28.506 13.637 21.020 1.00 25.36 ATOM 51 CA LEU L 6 29.919 13.220 20.982 1.00 25.98 ATOM 52 C LEU L 6 30.526 13.084 19.625 1.00 25.47 ATOM 53 O LEU L 6 31.723 12.824 19.512 1.00 26.29 ATOM 54 CB LEU L 6 30.172 12.004 21.862 1.00 25.75 ATOM 55 CG LEU L 6 29.946 12.206 23.341 1.00 27.35 ATOM 56 CD1 LEU L 6 30.061 10.876 24.061 1.00 27.29 ATOM 57 CD2 LEU L 6 30.843 13.299 24.005 1.00 28.75 ATOM 58 N PHE L 7 29.736 13.308 18.572 1.00 25.95 ATOM 59 CA PHE L 7 30.247 13.199 17.204 1.00 26.22 ATOM 60 C PHE L 7 29.935 14.428 16.352 1.00 26.83 ATOM 61 O PHE L 7 30.714 15.354 16.380 1.00 28.24 ATOM 62 CB PHE L 7 29.798 11.850 16.644 1.00 25.26 ATOM 63 CG PHE L 7 30.485 10.753 17.320 1.00 25.44 ATOM 64 CD1 PHE L 7 31.769 10.400 16.964 1.00 26.24 ATOM 65 CD2 PHE L 7 29.888 10.084 18.386 1.00 26.01 ATOM 66 CE1 PHE L 7 32.461 9.382 17.631 1.00 26.35 ATOM 67 CE2 PHE L 7 30.558 9.058 19.011 1.00 25.65 ATOM 68 CZ PHE L 7 31.823 8.706 18.641 1.00 26.55 ATOM 69 N GLU L 8 28.755 14.532 15.724 1.00 27.25 ATOM 70 CA GLU L 8 28.489 15.660 14.844 1.00 28.00 ATOM 71 C GLU L 8 28.641 17.008 15.618 1.00 29.23 ATOM 72 O GLU L 8 29.169 18.047 15.082 1.00 27.16 ATOM 73 CB GLU L 8 27.088 15.547 14.280 1.00 28.16 ATOM 74 CG GLU L 8 26.928 14.514 13.182 1.00 28.02 ATOM 75 CD GLU L 8 26.934 13.061 13.724 1.00 27.34 ATOM 76 OE1 GLU L 8 26.638 12.848 14.923 1.00 28.82 ATOM 77 OE2 GLU L 8 27.310 12.163 13.002 1.00 26.98 ATOM 78 N LYS L 9 28.193 17.001 16.885 1.00 31.02 ATOM 79 CA LYS L 9 28.113 18.260 17.688 1.00 32.72 ATOM 80 C LYS L 9 29.490 18.850 17.925 1.00 33.27 ATOM 81 O LYS L 9 29.628 20.064 17.951 1.00 34.48 ATOM 82 CB LYS L 9 27.319 18.091 19.009 1.00 35.85 ATOM 83 CG LYS L 9 27.095 19.412 19.783 1.00 41.06 ATOM 84 CD LYS L 9 26.289 19.211 21.085 1.00 45.28 ATOM 85 CE LYS L 9 26.645 20.191 22.225 1.00 49.24 ATOM 86 NZ LYS L 9 26.517 19.423 23.526 1.00 52.12 ATOM 87 N LYS L 10 30.513 17.996 18.058 1.00 32.73 ATOM 88 CA LYS L 10 31.917 18.367 18.148 1.00 34.98 ATOM 89 C LYS L 10 32.778 18.148 16.927 1.00 33.46 ATOM 90 O LYS L 10 33.993 18.182 17.049 1.00 34.25 ATOM 91 CB LYS L 10 32.592 17.412 19.097 1.00 36.39 ATOM 92 CG LYS L 10 31.971 17.263 20.409 1.00 38.00 ATOM 93 CD LYS L 10 32.659 16.096 21.119 1.00 37.13 ATOM 94 CE LYS L 10 33.701 16.595 22.008 1.00 38.88 ATOM 95 NZ LYS L 10 33.955 15.630 23.096 1.00 41.31 ATOM 96 N SER L 11 32.180 17.842 15.802 1.00 31.72 ATOM 97 CA SER L 11 32.854 17.515 14.554 1.00 31.28 ATOM 98 C SER L 11 33.922 16.426 14.692 1.00 31.53 ATOM 99 O SER L 11 35.043 16.581 14.198 1.00 32.47 ATOM 100 CB SER L 11 33.403 18.802 13.898 1.00 32.66 ATOM 101 OG SER L 11 33.780 18.547 12.554 1.00 32.28 ATOM 102 N LEU L 12 33.562 15.334 15.370 1.00 30.79 ATOM 103 CA LEU L 12 34.340 14.105 15.368 1.00 32.05 ATOM 104 C LEU L 12 33.562 13.022 14.603 1.00 30.79 ATOM 105 O LEU L 12 32.374 12.989 14.713 1.00 30.24 ATOM 106 CB LEU L 12 34.569 13.618 16.826 1.00 32.75 ATOM 107 CG LEU L 12 35.412 14.503 17.752 1.00 34.65 ATOM 108 CD1 LEU L 12 35.658 13.797 19.070 1.00 34.89 ATOM 109 CD2 LEU L 12 36.731 14.828 17.056 1.00 36.27 ATOM 110 N GLU L 13 34.250 12.198 13.822 1.00 31.17 ATOM 111 CA GLU L 13 33.634 11.098 13.110 1.00 31.92 ATOM 112 C GLU L 13 33.802 9.801 13.888 1.00 30.05 ATOM 113 O GLU L 13 34.856 9.574 14.497 1.00 28.83 ATOM 114 CB GLU L 13 34.322 10.878 11.795 1.00 34.43 ATOM 115 CG GLU L 13 34.062 11.908 10.798 1.00 39.12 ATOM 116 CD GLU L 13 34.633 11.508 9.424 1.00 44.03 ATOM 117 OE1 GLU L 13 35.127 10.318 9.219 1.00 47.91 ATOM 118 OE2 GLU L 13 34.532 12.425 8.563 1.00 44.26 ATOM 119 N ASP L 14 32.802 8.905 13.841 1.00 29.26 ATOM 120 CA ASP L 14 32.993 7.587 14.493 1.00 28.27 ATOM 121 C ASP L 14 33.841 6.760 13.515 1.00 30.12 ATOM 122 O ASP L 14 34.026 7.155 12.308 1.00 28.57 ATOM 123 CB ASP L 14 31.653 6.943 14.900 1.00 27.36 ATOM 124 CG ASP L 14 30.768 6.530 13.735 1.00 26.09 ATOM 125 OD1 ASP L 14 31.309 5.864 12.853 1.00 25.85 ATOM 126 OD2 ASP L 14 29.548 6.891 13.723 1.00 24.86 ATOM 127 N LYS L 14A 34.339 5.611 13.975 1.00 32.41 ATOM 128 CA LYS L 14A 35.257 4.808 13.136 1.00 34.02 ATOM 129 C LYS L 14A 34.661 4.191 11.829 1.00 32.05 ATOM 130 O LYS L 14A 35.420 3.764 10.947 1.00 31.02 ATOM 131 CB LYS L 14A 35.872 3.659 13.935 1.00 37.85 ATOM 132 CG LYS L 14A 36.702 4.043 15.173 1.00 42.10 ATOM 133 CD LYS L 14A 36.996 2.779 15.988 1.00 46.37 ATOM 134 CE LYS L 14A 37.850 2.939 17.251 1.00 51.02 ATOM 135 NZ LYS L 14A 38.900 3.989 17.050 1.00 55.70 ATOM 136 N THR L 14B 33.353 4.090 11.667 1.00 30.20 ATOM 137 CA THR L 14B 32.877 3.443 10.441 1.00 30.42 ATOM 138 C THR L 14B 31.857 4.257 9.654 1.00 29.11 ATOM 139 O THR L 14B 31.338 3.735 8.622 1.00 27.83 ATOM 140 CB THR L 14B 32.243 2.074 10.698 1.00 30.83 ATOM 141 OG1 THR L 14B 31.113 2.255 11.535 1.00 30.86 ATOM 142 CG2 THR L 14B 33.233 1.122 11.374 1.00 32.58 ATOM 143 N GLU L 14C 31.505 5.456 10.113 1.00 26.70 ATOM 144 CA GLU L 14C 30.501 6.224 9.372 1.00 27.28 ATOM 145 C GLU L 14C 30.906 6.534 7.889 1.00 28.36 ATOM 146 O GLU L 14C 30.026 6.602 7.013 1.00 30.24 ATOM 147 CB GLU L 14C 30.085 7.462 10.123 1.00 26.59 ATOM 148 CG GLU L 14C 31.212 8.488 10.239 1.00 27.06 ATOM 149 CD GLU L 14C 30.705 9.803 10.795 1.00 27.37 ATOM 150 OE1 GLU L 14C 30.625 9.920 12.030 1.00 27.19 ATOM 151 OE2 GLU L 14C 30.339 10.676 9.978 1.00 26.25 ATOM 152 N ARG L 14D 32.207 6.595 7.602 1.00 28.64 ATOM 153 CA ARG L 14D 32.734 6.751 6.234 1.00 30.92 ATOM 154 C ARG L 14D 32.335 5.577 5.324 1.00 30.20 ATOM 155 O ARG L 14D 32.113 5.794 4.117 1.00 28.01 ATOM 156 CB ARG L 14D 34.256 6.880 6.268 1.00 33.37 ATOM 157 CG ARG L 14D 35.053 7.226 5.004 1.00 35.19 ATOM 158 CD ARG L 14D 36.543 7.040 5.251 0.01 36.01 ATOM 159 NE ARG L 14D 37.373 7.820 4.341 0.01 36.89 ATOM 160 CZ ARG L 14D 38.686 7.973 4.484 0.01 38.04 ATOM 161 NH1 ARG L 14D 39.314 7.400 5.500 0.01 38.47 ATOM 162 NH2 ARG L 14D 39.370 8.700 3.615 0.01 38.95 ATOM 163 N GLU L 14E 32.252 4.353 5.896 1.00 29.07 ATOM 164 CA GLU L 14E 31.716 3.206 5.103 1.00 29.63 ATOM 165 C GLU L 14E 30.323 3.516 4.586 1.00 28.19 ATOM 166 O GLU L 14E 30.002 3.197 3.442 1.00 29.28 ATOM 167 CB GLU L 14E 31.641 1.928 5.916 1.00 30.56 ATOM 168 CG GLU L 14E 31.527 0.607 5.140 1.00 32.44 ATOM 169 CD GLU L 14E 31.263 -0.562 6.099 1.00 33.45 ATOM 170 OE1 GLU L 14E 31.618 -0.348 7.315 1.00 33.45 ATOM 171 OE2 GLU L 14E 30.732 -1.650 5.667 1.00 32.00 ATOM 172 N LEU L 14F 29.485 4.080 5.432 1.00 26.93 ATOM 173 CA LEU L 14F 28.148 4.477 4.981 1.00 28.65 ATOM 174 C LEU L 14F 28.237 5.493 3.803 1.00 27.40 ATOM 175 O LEU L 14F 27.690 5.226 2.708 1.00 29.71 ATOM 176 CB LEU L 14F 27.271 5.021 6.109 1.00 29.58 ATOM 177 CG LEU L 14F 27.202 4.099 7.347 1.00 31.83 ATOM 178 CD1 LEU L 14F 26.337 4.787 8.413 1.00 31.55 ATOM 179 CD2 LEU L 14F 26.812 2.685 7.048 1.00 33.17 ATOM 180 N LEU L 14G 29.007 6.542 4.012 1.00 26.15 ATOM 181 CA LEU L 14G 29.103 7.676 3.077 1.00 25.72 ATOM 182 C LEU L 14G 29.587 7.131 1.746 1.00 26.64 ATOM 183 O LEU L 14G 29.088 7.514 0.664 1.00 26.50 ATOM 184 CB LEU L 14G 30.068 8.731 3.559 1.00 26.63 ATOM 185 CG LEU L 14G 30.331 9.984 2.695 1.00 27.56 ATOM 186 CD1 LEU L 14G 29.048 10.681 2.244 1.00 28.06 ATOM 187 CD2 LEU L 14G 31.316 10.895 3.425 1.00 28.69 ATOM 188 N GLU L 14H 30.586 6.261 1.812 1.00 27.09 ATOM 189 CA GLU L 14H 31.183 5.720 0.581 1.00 28.10 ATOM 190 C GLU L 14H 30.178 4.898 -0.227 1.00 27.57 ATOM 191 O GLU L 14H 30.381 4.722 -1.403 1.00 27.99 ATOM 192 CB GLU L 14H 32.448 4.893 0.888 1.00 29.47 ATOM 193 CG GLU L 14H 33.653 5.759 1.254 1.00 30.34 ATOM 194 CD GLU L 14H 34.776 4.990 1.928 1.00 32.38 ATOM 195 OE1 GLU L 14H 34.642 3.758 2.270 1.00 31.99 ATOM 196 OE2 GLU L 14H 35.802 5.635 2.185 1.00 34.45 ATOM 197 N SER L 14I 29.174 4.329 0.407 1.00 27.10 ATOM 198 CA SER L 14I 28.117 3.563 -0.343 1.00 28.04 ATOM 199 C SER L 14I 27.043 4.470 -0.932 1.00 28.50 ATOM 200 O SER L 14I 26.188 3.953 -1.647 1.00 27.13 ATOM 201 CB SER L 14I 27.461 2.555 0.567 1.00 27.31 ATOM 202 OG SER L 14I 26.696 3.174 1.597 1.00 26.71 ATOM 203 N TYR L 14J 27.075 5.777 -0.608 1.00 27.45 ATOM 204 CA TYR L 14J 26.010 6.678 -1.004 1.00 28.92 ATOM 205 C TYR L 14J 26.400 7.356 -2.315 1.00 32.72 ATOM 206 O TYR L 14J 26.944 8.471 -2.355 1.00 32.40 ATOM 207 CB TYR L 14J 25.700 7.685 0.106 1.00 27.00 ATOM 208 CG TYR L 14J 25.230 7.175 1.365 1.00 25.94 ATOM 209 CD1 TYR L 14J 24.588 5.926 1.486 1.00 26.18 ATOM 210 CD2 TYR L 14J 25.410 7.921 2.533 1.00 26.58 ATOM 211 CE1 TYR L 14J 24.206 5.439 2.698 1.00 25.26 ATOM 212 CE2 TYR L 14J 25.072 7.387 3.803 1.00 25.58 ATOM 213 CZ TYR L 14J 24.384 6.204 3.873 1.00 24.71 ATOM 214 OH TYR L 14J 23.988 5.729 5.123 1.00 25.12 ATOM 215 N ILE L 14K 26.397 6.502 -3.318 1.00 37.10 ATOM 216 CA ILE L 14K 26.132 6.713 -4.766 1.00 45.54 ATOM 217 C ILE L 14K 26.805 5.497 -5.409 1.00 51.00 ATOM 218 O ILE L 14K 27.937 5.177 -5.020 1.00 56.75 ATOM 219 CB ILE L 14K 26.418 8.061 -5.435 1.00 46.10 ATOM 220 CG1 ILE L 14K 25.249 9.102 -5.155 1.00 45.13 ATOM 221 CG2 ILE L 14K 26.634 7.810 -6.912 1.00 48.47 ATOM 222 CD1 ILE L 14K 24.142 9.432 -6.184 1.00 44.96 TER