HEADER BLOOD CLOTTING 31-DEC-69 6ZUW TITLE Crystal Structure of Thrombin in complex with compound40 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Prothrombin; COMPND 3 CHAIN: L; COMPND 4 EC: 3.4.21.5; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.00 ANGSTORMS DBREF 6ZUW L -5 17 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 L 27 ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SER SEQRES 2 L 27 LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER TYR SEQRES 3 L 27 ILE ATOM 1 N ALA L 1B 14.619 19.687 16.122 1.00 49.53 ATOM 2 CA ALA L 1B 15.592 20.676 15.508 1.00 47.18 ATOM 3 C ALA L 1B 17.043 20.180 15.648 1.00 42.91 ATOM 4 O ALA L 1B 17.827 20.319 14.734 1.00 41.17 ATOM 5 CB ALA L 1B 15.426 22.054 16.120 1.00 50.10 ATOM 6 N ASP L 1A 17.378 19.562 16.775 1.00 40.12 ATOM 7 CA ASP L 1A 18.698 19.021 16.961 1.00 39.34 ATOM 8 C ASP L 1A 18.801 17.485 16.706 1.00 34.80 ATOM 9 O ASP L 1A 19.847 16.883 16.974 1.00 32.73 ATOM 10 CB ASP L 1A 19.154 19.369 18.387 1.00 43.80 ATOM 11 CG ASP L 1A 20.604 19.619 18.474 1.00 47.14 ATOM 12 OD1 ASP L 1A 21.201 20.057 17.461 1.00 50.84 ATOM 13 OD2 ASP L 1A 21.163 19.438 19.588 1.00 55.52 ATOM 14 N CYS L 1 17.758 16.858 16.161 1.00 32.56 ATOM 15 CA CYS L 1 17.770 15.378 15.956 1.00 31.78 ATOM 16 C CYS L 1 18.870 14.992 14.940 1.00 29.56 ATOM 17 O CYS L 1 19.363 15.800 14.168 1.00 27.90 ATOM 18 CB CYS L 1 16.377 14.939 15.401 1.00 31.42 ATOM 19 SG CYS L 1 16.052 15.417 13.628 1.00 31.45 ATOM 20 N GLY L 2 19.312 13.784 14.793 1.00 30.77 ATOM 21 CA GLY L 2 20.304 13.109 15.350 1.00 28.76 ATOM 22 C GLY L 2 21.632 13.676 14.838 1.00 26.44 ATOM 23 O GLY L 2 22.248 13.240 13.859 1.00 23.92 ATOM 24 N LEU L 3 22.042 14.650 15.618 1.00 25.10 ATOM 25 CA LEU L 3 23.388 15.164 15.692 1.00 25.49 ATOM 26 C LEU L 3 23.866 14.732 17.093 1.00 25.02 ATOM 27 O LEU L 3 23.245 15.010 18.139 1.00 24.26 ATOM 28 CB LEU L 3 23.445 16.660 15.545 1.00 26.97 ATOM 29 CG LEU L 3 22.898 17.242 14.198 1.00 27.98 ATOM 30 CD1 LEU L 3 22.704 18.781 14.266 1.00 29.84 ATOM 31 CD2 LEU L 3 23.838 16.828 13.088 1.00 27.25 ATOM 32 N ARG L 4 24.898 13.905 17.070 1.00 24.40 ATOM 33 CA ARG L 4 25.371 13.228 18.278 1.00 24.07 ATOM 34 C ARG L 4 26.282 14.137 19.048 1.00 24.84 ATOM 35 O ARG L 4 27.206 14.714 18.502 1.00 23.56 ATOM 36 CB ARG L 4 26.097 11.935 17.967 1.00 23.27 ATOM 37 CG ARG L 4 25.202 10.937 17.257 1.00 23.08 ATOM 38 CD ARG L 4 26.042 9.743 16.820 1.00 22.69 ATOM 39 NE ARG L 4 26.973 10.101 15.769 1.00 23.32 ATOM 40 CZ ARG L 4 27.831 9.259 15.162 1.00 23.81 ATOM 41 NH1 ARG L 4 27.885 7.983 15.502 1.00 25.87 ATOM 42 NH2 ARG L 4 28.610 9.701 14.213 1.00 24.07 ATOM 43 N PRO L 5 26.050 14.247 20.366 1.00 25.86 ATOM 44 CA PRO L 5 26.899 15.151 21.147 1.00 26.68 ATOM 45 C PRO L 5 28.402 14.846 21.074 1.00 26.52 ATOM 46 O PRO L 5 29.231 15.774 20.983 1.00 26.03 ATOM 47 CB PRO L 5 26.353 14.984 22.545 1.00 28.30 ATOM 48 CG PRO L 5 24.895 14.757 22.318 1.00 28.43 ATOM 49 CD PRO L 5 24.833 13.883 21.109 1.00 27.00 ATOM 50 N LEU L 6 28.760 13.562 20.967 1.00 25.77 ATOM 51 CA LEU L 6 30.187 13.143 21.014 1.00 26.18 ATOM 52 C LEU L 6 30.793 12.975 19.632 1.00 25.49 ATOM 53 O LEU L 6 32.000 12.716 19.489 1.00 25.87 ATOM 54 CB LEU L 6 30.385 11.938 21.934 1.00 26.35 ATOM 55 CG LEU L 6 30.135 12.150 23.421 1.00 27.96 ATOM 56 CD1 LEU L 6 30.157 10.807 24.143 1.00 29.05 ATOM 57 CD2 LEU L 6 31.109 13.151 24.123 1.00 29.03 ATOM 58 N PHE L 7 29.979 13.204 18.619 1.00 26.20 ATOM 59 CA PHE L 7 30.423 13.080 17.221 1.00 26.10 ATOM 60 C PHE L 7 30.186 14.374 16.410 1.00 26.74 ATOM 61 O PHE L 7 31.017 15.278 16.494 1.00 27.41 ATOM 62 CB PHE L 7 29.905 11.734 16.624 1.00 25.59 ATOM 63 CG PHE L 7 30.594 10.576 17.252 1.00 25.93 ATOM 64 CD1 PHE L 7 31.875 10.197 16.834 1.00 26.87 ATOM 65 CD2 PHE L 7 30.029 9.909 18.319 1.00 26.27 ATOM 66 CE1 PHE L 7 32.593 9.201 17.504 1.00 27.29 ATOM 67 CE2 PHE L 7 30.709 8.873 18.964 1.00 26.89 ATOM 68 CZ PHE L 7 31.982 8.508 18.558 1.00 27.74 ATOM 69 N GLU L 8 29.057 14.477 15.689 1.00 26.49 ATOM 70 CA GLU L 8 28.790 15.605 14.843 1.00 26.95 ATOM 71 C GLU L 8 28.939 16.940 15.588 1.00 28.40 ATOM 72 O GLU L 8 29.441 17.912 15.021 1.00 27.35 ATOM 73 CB GLU L 8 27.397 15.527 14.327 1.00 26.54 ATOM 74 CG GLU L 8 27.246 14.512 13.162 1.00 26.34 ATOM 75 CD GLU L 8 27.103 13.058 13.664 1.00 25.05 ATOM 76 OE1 GLU L 8 26.774 12.873 14.861 1.00 25.10 ATOM 77 OE2 GLU L 8 27.346 12.105 12.877 1.00 26.37 ATOM 78 N LYS L 9 28.518 16.967 16.873 1.00 30.10 ATOM 79 CA LYS L 9 28.554 18.215 17.651 1.00 33.59 ATOM 80 C LYS L 9 29.983 18.700 17.891 1.00 33.37 ATOM 81 O LYS L 9 30.187 19.877 18.072 1.00 34.53 ATOM 82 CB LYS L 9 27.730 18.075 18.923 1.00 37.17 ATOM 83 CG LYS L 9 27.339 19.382 19.566 1.00 43.46 ATOM 84 CD LYS L 9 26.744 19.162 20.963 1.00 48.12 ATOM 85 CE LYS L 9 27.157 20.230 21.959 1.00 51.92 ATOM 86 NZ LYS L 9 27.130 19.533 23.287 1.00 56.12 ATOM 87 N LYS L 10 30.972 17.811 17.798 1.00 33.22 ATOM 88 CA LYS L 10 32.392 18.130 17.986 1.00 35.00 ATOM 89 C LYS L 10 33.200 17.909 16.752 1.00 33.38 ATOM 90 O LYS L 10 34.439 17.936 16.818 1.00 34.48 ATOM 91 CB LYS L 10 33.043 17.164 19.019 1.00 37.14 ATOM 92 CG LYS L 10 32.284 16.951 20.266 1.00 39.50 ATOM 93 CD LYS L 10 32.850 15.796 21.145 1.00 38.43 ATOM 94 CE LYS L 10 34.245 16.135 21.634 1.00 39.49 ATOM 95 NZ LYS L 10 34.464 15.693 23.041 1.00 40.96 ATOM 96 N SER L 11 32.535 17.692 15.633 1.00 31.96 ATOM 97 CA SER L 11 33.177 17.361 14.327 1.00 31.78 ATOM 98 C SER L 11 34.236 16.246 14.463 1.00 31.25 ATOM 99 O SER L 11 35.332 16.349 13.935 1.00 32.11 ATOM 100 CB SER L 11 33.762 18.625 13.689 1.00 33.56 ATOM 101 OG SER L 11 34.211 18.336 12.380 1.00 34.18 ATOM 102 N LEU L 12 33.869 15.177 15.187 1.00 30.54 ATOM 103 CA LEU L 12 34.625 13.946 15.244 1.00 30.44 ATOM 104 C LEU L 12 33.823 12.841 14.511 1.00 29.93 ATOM 105 O LEU L 12 32.608 12.834 14.607 1.00 28.50 ATOM 106 CB LEU L 12 34.801 13.548 16.708 1.00 29.89 ATOM 107 CG LEU L 12 35.807 14.363 17.530 1.00 31.56 ATOM 108 CD1 LEU L 12 35.946 13.674 18.902 1.00 31.79 ATOM 109 CD2 LEU L 12 37.139 14.434 16.778 1.00 32.71 ATOM 110 N GLU L 13 34.495 11.946 13.780 1.00 30.82 ATOM 111 CA GLU L 13 33.788 10.882 13.036 1.00 32.16 ATOM 112 C GLU L 13 33.978 9.600 13.784 1.00 31.03 ATOM 113 O GLU L 13 35.073 9.369 14.305 1.00 31.50 ATOM 114 CB GLU L 13 34.397 10.622 11.668 1.00 34.76 ATOM 115 CG GLU L 13 34.691 11.807 10.846 1.00 39.39 ATOM 116 CD GLU L 13 34.873 11.450 9.339 1.00 44.24 ATOM 117 OE1 GLU L 13 35.195 10.270 8.948 1.00 48.09 ATOM 118 OE2 GLU L 13 34.618 12.361 8.546 1.00 46.43 ATOM 119 N ASP L 14 32.941 8.754 13.839 1.00 29.60 ATOM 120 CA ASP L 14 33.099 7.433 14.386 1.00 28.95 ATOM 121 C ASP L 14 33.915 6.572 13.372 1.00 30.13 ATOM 122 O ASP L 14 34.194 6.951 12.232 1.00 28.13 ATOM 123 CB ASP L 14 31.740 6.791 14.808 1.00 27.83 ATOM 124 CG ASP L 14 30.843 6.408 13.619 1.00 26.52 ATOM 125 OD1 ASP L 14 31.331 5.703 12.708 1.00 26.48 ATOM 126 OD2 ASP L 14 29.621 6.751 13.653 1.00 25.11 ATOM 127 N LYS L 14A 34.304 5.407 13.808 1.00 31.94 ATOM 128 CA LYS L 14A 35.217 4.577 12.998 1.00 35.65 ATOM 129 C LYS L 14A 34.680 3.975 11.672 1.00 33.95 ATOM 130 O LYS L 14A 35.481 3.563 10.852 1.00 35.78 ATOM 131 CB LYS L 14A 35.804 3.468 13.853 1.00 39.32 ATOM 132 CG LYS L 14A 36.682 3.978 14.996 1.00 43.71 ATOM 133 CD LYS L 14A 36.892 2.854 16.009 1.00 48.14 ATOM 134 CE LYS L 14A 37.690 3.245 17.264 1.00 52.86 ATOM 135 NZ LYS L 14A 38.968 3.958 16.920 1.00 57.24 ATOM 136 N THR L 14B 33.382 3.907 11.457 1.00 31.76 ATOM 137 CA THR L 14B 32.876 3.283 10.267 1.00 32.11 ATOM 138 C THR L 14B 31.864 4.136 9.486 1.00 31.08 ATOM 139 O THR L 14B 31.376 3.660 8.458 1.00 31.29 ATOM 140 CB THR L 14B 32.214 1.949 10.607 1.00 33.26 ATOM 141 OG1 THR L 14B 31.067 2.218 11.423 1.00 32.54 ATOM 142 CG2 THR L 14B 33.216 0.989 11.369 1.00 34.56 ATOM 143 N GLU L 14C 31.547 5.358 9.939 1.00 29.55 ATOM 144 CA GLU L 14C 30.576 6.163 9.226 1.00 28.86 ATOM 145 C GLU L 14C 31.021 6.495 7.803 1.00 30.06 ATOM 146 O GLU L 14C 30.175 6.618 6.919 1.00 30.79 ATOM 147 CB GLU L 14C 30.233 7.389 10.009 1.00 28.31 ATOM 148 CG GLU L 14C 31.348 8.451 10.091 1.00 28.32 ATOM 149 CD GLU L 14C 30.872 9.686 10.818 1.00 27.87 ATOM 150 OE1 GLU L 14C 30.832 9.740 12.090 1.00 26.37 ATOM 151 OE2 GLU L 14C 30.538 10.603 10.093 1.00 25.64 ATOM 152 N ARG L 14D 32.343 6.554 7.578 1.00 31.03 ATOM 153 CA ARG L 14D 32.916 6.716 6.232 1.00 32.13 ATOM 154 C ARG L 14D 32.534 5.564 5.285 1.00 32.34 ATOM 155 O ARG L 14D 32.316 5.820 4.119 1.00 31.95 ATOM 156 CB ARG L 14D 34.453 6.839 6.297 1.00 33.99 ATOM 157 CG ARG L 14D 35.144 7.473 5.076 1.00 35.07 ATOM 158 CD ARG L 14D 36.555 8.012 5.393 0.20 36.11 ATOM 159 NE ARG L 14D 37.461 7.888 4.243 0.20 37.95 ATOM 160 CZ ARG L 14D 38.780 8.078 4.279 0.20 39.36 ATOM 161 NH1 ARG L 14D 39.395 8.417 5.400 0.20 39.13 ATOM 162 NH2 ARG L 14D 39.492 7.930 3.179 0.20 41.16 ATOM 163 N GLU L 14E 32.429 4.325 5.785 1.00 31.45 ATOM 164 CA GLU L 14E 31.903 3.215 4.957 1.00 31.84 ATOM 165 C GLU L 14E 30.475 3.469 4.466 1.00 29.84 ATOM 166 O GLU L 14E 30.111 3.141 3.288 1.00 29.44 ATOM 167 CB GLU L 14E 32.010 1.885 5.728 1.00 33.52 ATOM 168 CG GLU L 14E 31.633 0.594 5.051 1.00 36.04 ATOM 169 CD GLU L 14E 31.370 -0.569 6.039 1.00 37.73 ATOM 170 OE1 GLU L 14E 31.656 -0.319 7.276 1.00 38.33 ATOM 171 OE2 GLU L 14E 30.866 -1.648 5.590 1.00 36.55 ATOM 172 N LEU L 14F 29.655 4.077 5.307 1.00 27.70 ATOM 173 CA LEU L 14F 28.306 4.476 4.898 1.00 27.99 ATOM 174 C LEU L 14F 28.335 5.565 3.806 1.00 28.31 ATOM 175 O LEU L 14F 27.714 5.400 2.729 1.00 29.91 ATOM 176 CB LEU L 14F 27.487 4.965 6.076 1.00 28.16 ATOM 177 CG LEU L 14F 27.341 3.968 7.276 1.00 28.51 ATOM 178 CD1 LEU L 14F 26.492 4.697 8.295 1.00 27.47 ATOM 179 CD2 LEU L 14F 26.738 2.680 6.835 1.00 29.57 ATOM 180 N LEU L 14G 29.127 6.594 4.044 1.00 28.29 ATOM 181 CA LEU L 14G 29.287 7.716 3.090 1.00 28.68 ATOM 182 C LEU L 14G 29.736 7.236 1.689 1.00 29.98 ATOM 183 O LEU L 14G 29.161 7.625 0.666 1.00 28.88 ATOM 184 CB LEU L 14G 30.280 8.742 3.627 1.00 29.61 ATOM 185 CG LEU L 14G 30.590 10.009 2.826 1.00 31.17 ATOM 186 CD1 LEU L 14G 29.318 10.682 2.341 1.00 31.98 ATOM 187 CD2 LEU L 14G 31.473 11.015 3.576 1.00 32.67 ATOM 188 N GLU L 14H 30.762 6.379 1.677 1.00 31.32 ATOM 189 CA GLU L 14H 31.316 5.846 0.441 1.00 32.97 ATOM 190 C GLU L 14H 30.313 5.005 -0.281 1.00 32.84 ATOM 191 O GLU L 14H 30.367 4.936 -1.490 1.00 33.84 ATOM 192 CB GLU L 14H 32.584 5.054 0.722 1.00 35.58 ATOM 193 CG GLU L 14H 33.712 5.942 1.240 1.00 37.04 ATOM 194 CD GLU L 14H 34.881 5.206 1.909 1.00 39.34 ATOM 195 OE1 GLU L 14H 34.811 3.981 2.191 1.00 40.63 ATOM 196 OE2 GLU L 14H 35.896 5.897 2.141 1.00 41.62 ATOM 197 N SER L 14I 29.360 4.402 0.402 1.00 31.43 ATOM 198 CA SER L 14I 28.248 3.736 -0.335 1.00 32.69 ATOM 199 C SER L 14I 27.204 4.667 -0.984 1.00 32.75 ATOM 200 O SER L 14I 26.414 4.199 -1.767 1.00 32.45 ATOM 201 CB SER L 14I 27.501 2.692 0.571 1.00 31.99 ATOM 202 OG SER L 14I 26.698 3.339 1.564 1.00 30.75 ATOM 203 N TYR L 14J 27.147 5.952 -0.606 1.00 33.14 ATOM 204 CA TYR L 14J 26.105 6.867 -1.089 1.00 33.95 ATOM 205 C TYR L 14J 26.576 7.589 -2.340 1.00 38.77 ATOM 206 O TYR L 14J 27.248 8.601 -2.282 1.00 38.70 ATOM 207 CB TYR L 14J 25.698 7.872 0.042 1.00 31.62 ATOM 208 CG TYR L 14J 25.280 7.259 1.369 1.00 28.81 ATOM 209 CD1 TYR L 14J 24.730 5.997 1.458 1.00 28.40 ATOM 210 CD2 TYR L 14J 25.398 7.988 2.545 1.00 28.10 ATOM 211 CE1 TYR L 14J 24.348 5.469 2.656 1.00 27.67 ATOM 212 CE2 TYR L 14J 25.033 7.450 3.777 1.00 26.71 ATOM 213 CZ TYR L 14J 24.463 6.239 3.856 1.00 26.16 ATOM 214 OH TYR L 14J 24.184 5.748 5.141 1.00 25.49 ATOM 215 N ILE L 14K 26.220 7.037 -3.487 1.00 45.54 ATOM 216 CA ILE L 14K 26.526 7.593 -4.842 1.00 52.95 ATOM 217 C ILE L 14K 25.417 8.538 -5.465 1.00 58.08 ATOM 218 O ILE L 14K 25.132 9.675 -5.096 1.00 58.12 ATOM 219 CB ILE L 14K 26.725 6.439 -5.863 1.00 55.34 ATOM 220 CG1 ILE L 14K 27.494 5.245 -5.245 1.00 55.35 ATOM 221 CG2 ILE L 14K 27.393 6.961 -7.146 1.00 58.58 ATOM 222 CD1 ILE L 14K 28.816 5.600 -4.618 1.00 54.91 TER