HEADER BLOOD CLOTTING 31-DEC-69 6ZV8 TITLE Crystal Structure of Thrombin in complex with compound51 COMPND MOL_ID: 1; COMPND 2 MOLECULE: Prothrombin; COMPND 3 CHAIN: L; COMPND 4 EC: 3.4.21.5; COMPND 5 FRAGMENT: POTENIALLY THE FIRST ; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.70 ANGSTORMS DBREF 6ZV8 L -5 17 UNP P00734 THRB_HUMAN 328 363 SEQRES 1 L 27 ALA ASP CYS GLY LEU ARG PRO LEU PHE GLU LYS LYS SER SEQRES 2 L 27 LEU GLU ASP LYS THR GLU ARG GLU LEU LEU GLU SER TYR SEQRES 3 L 27 ILE ATOM 1 N ALA L 1B 13.962 19.447 15.668 1.00 32.33 ATOM 2 CA ALA L 1B 14.920 20.417 15.087 1.00 32.89 ATOM 3 C ALA L 1B 16.327 19.800 15.159 1.00 27.56 ATOM 4 O ALA L 1B 17.141 19.939 14.262 1.00 27.90 ATOM 5 CB ALA L 1B 14.860 21.717 15.878 1.00 35.20 ATOM 6 N ASP L 1A 16.862 19.115 16.426 1.00 22.52 ATOM 7 CA ASP L 1A 18.246 18.805 16.632 1.00 22.09 ATOM 8 C ASP L 1A 18.580 17.343 16.287 1.00 17.56 ATOM 9 O ASP L 1A 19.316 16.700 16.977 1.00 19.14 ATOM 10 CB ASP L 1A 18.615 19.110 18.082 1.00 23.24 ATOM 11 CG ASP L 1A 20.057 19.238 18.253 1.00 28.68 ATOM 12 OD1 ASP L 1A 20.684 19.700 17.278 1.00 28.75 ATOM 13 OD2 ASP L 1A 20.594 18.801 19.293 1.00 29.93 ATOM 14 N CYS L 1 17.207 16.699 15.777 1.00 15.07 ATOM 15 CA CYS L 1 17.315 15.243 15.735 1.00 12.67 ATOM 16 C CYS L 1 18.471 14.790 14.940 1.00 10.64 ATOM 17 O CYS L 1 18.901 15.443 14.000 1.00 11.10 ATOM 18 CB CYS L 1 16.050 14.653 15.114 1.00 13.67 ATOM 19 SG CYS L 1 15.773 15.132 13.391 1.00 14.59 ATOM 20 N GLY L 2 18.923 13.598 15.284 1.00 9.72 ATOM 21 CA GLY L 2 19.862 12.855 14.437 1.00 9.43 ATOM 22 C GLY L 2 21.277 13.446 14.425 1.00 9.78 ATOM 23 O GLY L 2 22.096 13.005 13.662 1.00 9.51 ATOM 24 N LEU L 3 21.540 14.377 15.300 1.00 9.13 ATOM 25 CA LEU L 3 22.869 14.918 15.496 1.00 10.36 ATOM 26 C LEU L 3 23.413 14.519 16.864 1.00 9.95 ATOM 27 O LEU L 3 22.822 14.841 17.925 1.00 11.53 ATOM 28 CB LEU L 3 22.756 16.388 15.359 1.00 12.42 ATOM 29 CG LEU L 3 22.302 16.906 14.057 1.00 14.36 ATOM 30 CD1 LEU L 3 22.118 18.425 14.274 1.00 17.01 ATOM 31 CD2 LEU L 3 23.305 16.585 12.950 1.00 13.73 ATOM 32 N ARG L 4 24.490 13.775 16.881 1.00 9.74 ATOM 33 CA ARG L 4 24.962 13.139 18.096 1.00 9.05 ATOM 34 C ARG L 4 25.899 14.032 18.854 1.00 9.59 ATOM 35 O ARG L 4 26.864 14.538 18.252 1.00 9.58 ATOM 36 CB ARG L 4 25.646 11.856 17.845 1.00 9.03 ATOM 37 CG ARG L 4 24.817 10.855 17.107 1.00 10.24 ATOM 38 CD ARG L 4 25.617 9.670 16.624 1.00 9.35 ATOM 39 NE ARG L 4 26.422 10.052 15.522 1.00 9.34 ATOM 40 CZ ARG L 4 27.357 9.284 14.979 1.00 8.65 ATOM 41 NH1 ARG L 4 27.547 8.062 15.403 1.00 9.20 ATOM 42 NH2 ARG L 4 28.086 9.735 13.994 1.00 7.97 ATOM 43 N PRO L 5 25.637 14.209 20.115 1.00 9.55 ATOM 44 CA PRO L 5 26.517 15.098 20.890 1.00 9.71 ATOM 45 C PRO L 5 27.960 14.729 20.804 1.00 11.49 ATOM 46 O PRO L 5 28.765 15.637 20.794 1.00 13.69 ATOM 47 CB PRO L 5 26.022 14.955 22.312 1.00 9.50 ATOM 48 CG PRO L 5 24.572 14.732 22.112 1.00 9.35 ATOM 49 CD PRO L 5 24.477 13.811 20.936 1.00 8.69 ATOM 50 N LEU L 6 28.282 13.453 20.778 1.00 10.60 ATOM 51 CA LEU L 6 29.688 13.039 20.823 1.00 12.17 ATOM 52 C LEU L 6 30.231 12.906 19.434 1.00 10.84 ATOM 53 O LEU L 6 31.423 12.610 19.285 1.00 10.61 ATOM 54 CB LEU L 6 29.853 11.797 21.638 1.00 13.01 ATOM 55 CG LEU L 6 29.462 12.008 23.070 1.00 13.03 ATOM 56 CD1 LEU L 6 29.712 10.669 23.766 1.00 13.57 ATOM 57 CD2 LEU L 6 30.286 13.096 23.728 1.00 14.28 ATOM 58 N PHE L 7 29.426 13.183 18.412 1.00 10.41 ATOM 59 CA PHE L 7 29.931 13.024 17.041 1.00 10.49 ATOM 60 C PHE L 7 29.633 14.223 16.212 1.00 11.10 ATOM 61 O PHE L 7 30.393 15.171 16.255 1.00 11.56 ATOM 62 CB PHE L 7 29.453 11.700 16.464 1.00 10.63 ATOM 63 CG PHE L 7 30.096 10.545 17.130 1.00 9.48 ATOM 64 CD1 PHE L 7 31.364 10.136 16.863 1.00 10.12 ATOM 65 CD2 PHE L 7 29.400 9.854 18.121 1.00 10.31 ATOM 66 CE1 PHE L 7 31.950 9.130 17.589 1.00 10.05 ATOM 67 CE2 PHE L 7 29.970 8.830 18.800 1.00 10.21 ATOM 68 CZ PHE L 7 31.243 8.419 18.531 1.00 10.67 ATOM 69 N GLU L 8 28.464 14.291 15.583 1.00 10.43 ATOM 70 CA GLU L 8 28.182 15.448 14.748 1.00 11.35 ATOM 71 C GLU L 8 28.339 16.753 15.490 1.00 12.05 ATOM 72 O GLU L 8 28.751 17.731 14.880 1.00 10.79 ATOM 73 CB GLU L 8 26.750 15.399 14.230 1.00 10.68 ATOM 74 CG GLU L 8 26.578 14.365 13.159 1.00 10.76 ATOM 75 CD GLU L 8 26.585 12.934 13.702 1.00 10.79 ATOM 76 OE1 GLU L 8 26.221 12.737 14.910 1.00 9.81 ATOM 77 OE2 GLU L 8 26.988 12.025 12.941 1.00 10.20 ATOM 78 N LYS L 9 27.897 16.799 16.744 1.00 12.13 ATOM 79 CA LYS L 9 27.919 18.061 17.431 1.00 13.87 ATOM 80 C LYS L 9 29.351 18.555 17.652 1.00 13.89 ATOM 81 O LYS L 9 29.511 19.757 17.837 1.00 17.03 ATOM 82 CB LYS L 9 27.130 17.943 18.765 1.00 15.68 ATOM 83 CG LYS L 9 26.920 19.214 19.539 1.00 21.47 ATOM 84 CD LYS L 9 26.161 18.999 20.842 1.00 25.89 ATOM 85 CE LYS L 9 26.726 19.846 21.974 1.00 29.66 ATOM 86 NZ LYS L 9 26.309 19.456 23.351 1.00 33.73 ATOM 87 N LYS L 10 30.326 17.661 17.584 1.00 14.53 ATOM 88 CA LYS L 10 31.739 17.950 17.840 1.00 17.60 ATOM 89 C LYS L 10 32.518 17.811 16.601 1.00 16.29 ATOM 90 O LYS L 10 33.736 17.804 16.640 1.00 17.02 ATOM 91 CB LYS L 10 32.331 16.910 18.774 1.00 19.67 ATOM 92 CG LYS L 10 31.632 16.834 20.083 1.00 22.57 ATOM 93 CD LYS L 10 32.254 15.754 20.920 1.00 22.62 ATOM 94 CE LYS L 10 33.650 16.072 21.363 1.00 23.47 ATOM 95 NZ LYS L 10 33.895 15.448 22.687 1.00 23.71 ATOM 96 N SER L 11 31.851 17.603 15.470 1.00 13.21 ATOM 97 CA SER L 11 32.553 17.262 14.236 1.00 14.35 ATOM 98 C SER L 11 33.550 16.128 14.379 1.00 15.93 ATOM 99 O SER L 11 34.702 16.160 13.952 1.00 16.17 ATOM 100 CB SER L 11 33.141 18.503 13.588 1.00 14.40 ATOM 101 OG SER L 11 33.193 18.233 12.212 1.00 15.45 ATOM 102 N LEU L 12 33.114 15.046 15.026 1.00 14.54 ATOM 103 CA LEU L 12 33.861 13.878 15.119 1.00 13.99 ATOM 104 C LEU L 12 33.049 12.797 14.441 1.00 13.97 ATOM 105 O LEU L 12 31.801 12.816 14.442 1.00 12.11 ATOM 106 CB LEU L 12 34.092 13.471 16.578 1.00 14.02 ATOM 107 CG LEU L 12 35.092 14.328 17.403 1.00 14.22 ATOM 108 CD1 LEU L 12 35.017 13.835 18.815 1.00 15.21 ATOM 109 CD2 LEU L 12 36.472 14.125 16.785 1.00 16.06 ATOM 110 N GLU L 13 33.784 11.958 13.759 1.00 14.46 ATOM 111 CA GLU L 13 33.142 10.860 13.020 1.00 15.88 ATOM 112 C GLU L 13 33.333 9.647 13.824 1.00 12.87 ATOM 113 O GLU L 13 34.350 9.475 14.464 1.00 13.27 ATOM 114 CB GLU L 13 33.755 10.687 11.636 1.00 18.22 ATOM 115 CG GLU L 13 33.408 11.836 10.725 1.00 21.57 ATOM 116 CD GLU L 13 33.811 11.585 9.273 1.00 24.84 ATOM 117 OE1 GLU L 13 34.550 10.600 8.955 1.00 31.54 ATOM 118 OE2 GLU L 13 33.409 12.434 8.458 1.00 31.02 ATOM 119 N ASP L 14 32.360 8.734 13.781 1.00 10.61 ATOM 120 CA ASP L 14 32.548 7.462 14.316 1.00 10.03 ATOM 121 C ASP L 14 33.346 6.567 13.430 1.00 8.85 ATOM 122 O ASP L 14 33.655 6.971 12.289 1.00 10.40 ATOM 123 CB ASP L 14 31.193 6.814 14.757 1.00 10.42 ATOM 124 CG ASP L 14 30.310 6.384 13.617 1.00 9.79 ATOM 125 OD1 ASP L 14 30.780 5.708 12.661 1.00 11.81 ATOM 126 OD2 ASP L 14 29.080 6.736 13.638 1.00 8.60 ATOM 127 N LYS L 14A 33.779 5.287 13.895 1.00 15.71 ATOM 128 CA LYS L 14A 34.792 4.509 13.168 1.00 17.21 ATOM 129 C LYS L 14A 34.242 4.009 11.853 1.00 16.05 ATOM 130 O LYS L 14A 34.952 3.630 10.942 1.00 15.49 ATOM 131 CB LYS L 14A 35.267 3.344 14.009 1.00 19.73 ATOM 132 CG LYS L 14A 36.203 3.763 15.162 1.00 24.60 ATOM 133 CD LYS L 14A 36.083 2.841 16.360 1.00 28.17 ATOM 134 CE LYS L 14A 36.972 3.201 17.557 1.00 29.70 ATOM 135 NZ LYS L 14A 38.410 3.145 17.176 1.00 32.11 ATOM 136 N THR L 14B 32.841 3.915 11.492 1.00 12.10 ATOM 137 CA THR L 14B 32.442 3.148 10.302 1.00 13.27 ATOM 138 C THR L 14B 31.480 4.055 9.527 1.00 14.33 ATOM 139 O THR L 14B 30.846 3.670 8.561 1.00 14.47 ATOM 140 CB THR L 14B 31.776 1.830 10.693 1.00 14.00 ATOM 141 OG1 THR L 14B 30.587 2.078 11.425 1.00 12.64 ATOM 142 CG2 THR L 14B 32.676 1.066 11.609 1.00 15.50 ATOM 143 N GLU L 14C 31.068 5.368 10.066 1.00 11.41 ATOM 144 CA GLU L 14C 30.053 6.070 9.259 1.00 9.70 ATOM 145 C GLU L 14C 30.527 6.385 7.821 1.00 11.21 ATOM 146 O GLU L 14C 29.715 6.465 6.856 1.00 11.05 ATOM 147 CB GLU L 14C 29.635 7.398 9.925 1.00 10.34 ATOM 148 CG GLU L 14C 30.831 8.340 10.309 1.00 10.35 ATOM 149 CD GLU L 14C 30.283 9.581 10.906 1.00 9.78 ATOM 150 OE1 GLU L 14C 30.097 9.643 12.144 1.00 11.19 ATOM 151 OE2 GLU L 14C 29.920 10.405 10.077 1.00 11.01 ATOM 152 N ARG L 14D 31.883 6.372 7.616 1.00 14.54 ATOM 153 CA ARG L 14D 32.368 6.650 6.253 1.00 16.68 ATOM 154 C ARG L 14D 31.920 5.556 5.264 1.00 13.44 ATOM 155 O ARG L 14D 31.612 5.822 4.106 1.00 14.93 ATOM 156 CB ARG L 14D 33.880 6.660 6.283 1.00 18.32 ATOM 157 CG ARG L 14D 34.509 6.999 4.942 1.00 20.87 ATOM 158 CD ARG L 14D 36.002 7.252 5.087 0.01 20.19 ATOM 159 NE ARG L 14D 36.506 8.199 4.096 0.01 20.32 ATOM 160 CZ ARG L 14D 37.714 8.750 4.146 0.01 20.26 ATOM 161 NH1 ARG L 14D 38.540 8.448 5.138 0.01 20.27 ATOM 162 NH2 ARG L 14D 38.095 9.605 3.208 0.01 20.25 ATOM 163 N GLU L 14E 31.940 4.179 5.890 1.00 14.08 ATOM 164 CA GLU L 14E 31.342 3.058 5.157 1.00 12.49 ATOM 165 C GLU L 14E 29.969 3.415 4.620 1.00 10.90 ATOM 166 O GLU L 14E 29.622 3.082 3.485 1.00 11.16 ATOM 167 CB GLU L 14E 31.189 1.883 6.095 1.00 14.13 ATOM 168 CG GLU L 14E 30.912 0.631 5.376 1.00 16.01 ATOM 169 CD GLU L 14E 30.760 -0.572 6.266 1.00 17.46 ATOM 170 OE1 GLU L 14E 31.040 -0.443 7.496 1.00 18.55 ATOM 171 OE2 GLU L 14E 30.342 -1.661 5.723 1.00 18.10 ATOM 172 N LEU L 14F 29.077 4.036 5.472 1.00 11.08 ATOM 173 CA LEU L 14F 27.757 4.307 4.928 1.00 12.13 ATOM 174 C LEU L 14F 27.932 5.302 3.774 1.00 12.25 ATOM 175 O LEU L 14F 27.310 5.249 2.754 1.00 12.70 ATOM 176 CB LEU L 14F 26.922 4.901 6.050 1.00 14.57 ATOM 177 CG LEU L 14F 26.838 4.021 7.289 1.00 15.21 ATOM 178 CD1 LEU L 14F 25.894 4.636 8.348 1.00 14.60 ATOM 179 CD2 LEU L 14F 26.533 2.547 7.116 1.00 16.23 ATOM 180 N LEU L 14G 28.769 6.454 4.025 1.00 10.59 ATOM 181 CA LEU L 14G 28.721 7.548 3.071 1.00 9.78 ATOM 182 C LEU L 14G 29.204 7.009 1.719 1.00 9.66 ATOM 183 O LEU L 14G 28.654 7.390 0.697 1.00 11.64 ATOM 184 CB LEU L 14G 29.710 8.586 3.537 1.00 10.80 ATOM 185 CG LEU L 14G 29.908 9.853 2.671 1.00 13.73 ATOM 186 CD1 LEU L 14G 28.622 10.349 2.108 1.00 15.22 ATOM 187 CD2 LEU L 14G 30.656 10.941 3.393 1.00 16.44 ATOM 188 N GLU L 14H 30.284 6.150 1.970 1.00 11.20 ATOM 189 CA GLU L 14H 30.808 5.591 0.666 1.00 12.31 ATOM 190 C GLU L 14H 29.832 4.778 -0.156 1.00 11.74 ATOM 191 O GLU L 14H 29.942 4.692 -1.373 1.00 13.32 ATOM 192 CB GLU L 14H 32.029 4.842 0.922 1.00 13.71 ATOM 193 CG GLU L 14H 33.140 5.735 1.364 1.00 14.36 ATOM 194 CD GLU L 14H 34.320 5.000 1.946 1.00 16.62 ATOM 195 OE1 GLU L 14H 34.247 3.824 2.262 1.00 20.33 ATOM 196 OE2 GLU L 14H 35.362 5.660 2.095 1.00 19.67 ATOM 197 N SER L 14I 28.815 4.193 0.466 1.00 11.12 ATOM 198 CA SER L 14I 27.821 3.337 -0.161 1.00 11.54 ATOM 199 C SER L 14I 26.738 4.215 -0.765 1.00 11.74 ATOM 200 O SER L 14I 25.950 3.769 -1.584 1.00 12.05 ATOM 201 CB SER L 14I 27.220 2.451 0.892 1.00 11.90 ATOM 202 OG SER L 14I 26.287 3.215 1.665 1.00 10.93 ATOM 203 N TYR L 14J 26.720 5.693 -0.506 1.00 12.86 ATOM 204 CA TYR L 14J 25.652 6.544 -1.012 1.00 12.88 ATOM 205 C TYR L 14J 26.201 7.190 -2.252 1.00 15.48 ATOM 206 O TYR L 14J 26.734 8.265 -2.241 1.00 18.78 ATOM 207 CB TYR L 14J 25.258 7.556 0.042 1.00 14.90 ATOM 208 CG TYR L 14J 24.848 7.006 1.356 1.00 14.87 ATOM 209 CD1 TYR L 14J 24.273 5.725 1.479 1.00 15.05 ATOM 210 CD2 TYR L 14J 24.921 7.798 2.508 1.00 14.25 ATOM 211 CE1 TYR L 14J 23.882 5.244 2.731 1.00 15.19 ATOM 212 CE2 TYR L 14J 24.561 7.287 3.757 1.00 14.03 ATOM 213 CZ TYR L 14J 24.056 6.031 3.900 1.00 14.61 ATOM 214 OH TYR L 14J 23.655 5.574 5.183 1.00 12.98 ATOM 215 N ILE L 14K 26.238 6.109 -3.406 1.00 23.91 ATOM 216 CA ILE L 14K 26.946 6.380 -4.630 1.00 24.67 ATOM 217 C ILE L 14K 26.102 7.162 -5.606 1.00 27.12 ATOM 218 O ILE L 14K 26.664 7.567 -6.645 1.00 29.57 ATOM 219 CB ILE L 14K 27.426 5.069 -5.246 1.00 23.19 ATOM 220 CG1 ILE L 14K 26.229 4.147 -5.523 1.00 25.39 ATOM 221 CG2 ILE L 14K 28.502 4.455 -4.365 1.00 20.34 ATOM 222 CD1 ILE L 14K 26.472 3.295 -6.736 1.00 25.71 TER