HEADER TRANSLATION 31-DEC-69 6ZVK TITLE The Halastavi arva virus (HalV) intergenic region IRES promotes TITLE 2 translation by the simplest possible initiation mechanism COMPND MOL_ID: 75; COMPND 2 MOLECULE: 60s ribosomal protein l41; COMPND 3 CHAIN: X3; EXPDTA ELECTRON MICROSCOPY DBREF 6ZVK X 2 24 UNP A0A087WN A0A087WNH4_ 2 24 SEQRES 1 X3 23 ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU LYS SEQRES 2 X3 23 ARG LYS ARG ARG LYS MET ARG GLN ARG SER ATOM 1 N ARG X 2 188.141 236.090 164.164 1.00 24.65 ATOM 2 CA ARG X 2 188.153 235.936 162.716 1.00 24.65 ATOM 3 C ARG X 2 187.006 235.028 162.330 1.00 24.65 ATOM 4 O ARG X 2 186.497 234.297 163.165 1.00 24.65 ATOM 5 CB ARG X 2 189.491 235.375 162.238 1.00 24.65 ATOM 6 CG ARG X 2 189.599 235.175 160.742 1.00 24.65 ATOM 7 CD ARG X 2 190.949 234.637 160.336 1.00 24.65 ATOM 8 NE ARG X 2 190.871 233.930 159.065 1.00 24.65 ATOM 9 CZ ARG X 2 191.855 233.202 158.554 1.00 24.65 ATOM 10 NH1 ARG X 2 191.688 232.589 157.394 1.00 24.65 ATOM 11 NH2 ARG X 2 193.003 233.091 159.199 1.00 24.65 ATOM 12 N ALA X 3 186.587 235.083 161.067 1.00 26.11 ATOM 13 CA ALA X 3 185.373 234.387 160.657 1.00 26.11 ATOM 14 C ALA X 3 185.559 232.874 160.659 1.00 26.11 ATOM 15 O ALA X 3 184.660 232.132 161.067 1.00 26.11 ATOM 16 CB ALA X 3 184.931 234.879 159.280 1.00 26.11 ATOM 17 N LYS X 4 186.707 232.388 160.192 1.00 24.22 ATOM 18 CA LYS X 4 186.862 230.942 160.076 1.00 24.22 ATOM 19 C LYS X 4 187.215 230.299 161.408 1.00 24.22 ATOM 20 O LYS X 4 186.639 229.269 161.768 1.00 24.22 ATOM 21 CB LYS X 4 187.917 230.584 159.038 1.00 24.22 ATOM 22 CG LYS X 4 188.254 229.104 159.046 1.00 24.22 ATOM 23 CD LYS X 4 189.202 228.751 157.934 1.00 24.22 ATOM 24 CE LYS X 4 190.375 229.693 157.916 1.00 24.22 ATOM 25 NZ LYS X 4 191.243 229.432 156.751 1.00 24.22 ATOM 26 N TRP X 5 188.172 230.864 162.144 1.00 24.41 ATOM 27 CA TRP X 5 188.591 230.227 163.388 1.00 24.41 ATOM 28 C TRP X 5 187.411 230.068 164.334 1.00 24.41 ATOM 29 O TRP X 5 187.325 229.084 165.075 1.00 24.41 ATOM 30 CB TRP X 5 189.701 231.037 164.046 1.00 24.41 ATOM 31 CG TRP X 5 190.906 231.218 163.193 1.00 24.41 ATOM 32 CD1 TRP X 5 191.507 232.393 162.887 1.00 24.41 ATOM 33 CD2 TRP X 5 191.661 230.201 162.531 1.00 24.41 ATOM 34 NE1 TRP X 5 192.588 232.180 162.076 1.00 24.41 ATOM 35 CE2 TRP X 5 192.703 230.838 161.844 1.00 24.41 ATOM 36 CE3 TRP X 5 191.555 228.814 162.450 1.00 24.41 ATOM 37 CZ2 TRP X 5 193.630 230.140 161.094 1.00 24.41 ATOM 38 CZ3 TRP X 5 192.478 228.124 161.701 1.00 24.41 ATOM 39 CH2 TRP X 5 193.500 228.784 161.035 1.00 24.41 ATOM 40 N ARG X 6 186.490 231.029 164.304 1.00 27.87 ATOM 41 CA ARG X 6 185.204 230.885 164.973 1.00 27.87 ATOM 42 C ARG X 6 184.475 229.632 164.521 1.00 27.87 ATOM 43 O ARG X 6 183.839 228.952 165.331 1.00 27.87 ATOM 44 CB ARG X 6 184.361 232.117 164.682 1.00 27.87 ATOM 45 CG ARG X 6 182.989 232.127 165.261 1.00 27.87 ATOM 46 CD ARG X 6 182.426 233.518 165.111 1.00 27.87 ATOM 47 NE ARG X 6 180.983 233.538 165.290 1.00 27.87 ATOM 48 CZ ARG X 6 180.125 233.543 164.274 1.00 27.87 ATOM 49 NH1 ARG X 6 180.575 233.537 163.029 1.00 27.87 ATOM 50 NH2 ARG X 6 178.821 233.557 164.499 1.00 27.87 ATOM 51 N LYS X 7 184.544 229.314 163.230 1.00 26.75 ATOM 52 CA LYS X 7 183.865 228.125 162.726 1.00 26.75 ATOM 53 C LYS X 7 184.574 226.859 163.179 1.00 26.75 ATOM 54 O LYS X 7 183.956 225.795 163.274 1.00 26.75 ATOM 55 CB LYS X 7 183.779 228.189 161.204 1.00 26.75 ATOM 56 CG LYS X 7 182.980 227.103 160.540 1.00 26.75 ATOM 57 CD LYS X 7 182.774 227.463 159.083 1.00 26.75 ATOM 58 CE LYS X 7 181.899 226.466 158.367 1.00 26.75 ATOM 59 NZ LYS X 7 182.605 225.187 158.142 1.00 26.75 ATOM 60 N LYS X 8 185.872 226.949 163.463 1.00 29.58 ATOM 61 CA LYS X 8 186.577 225.786 163.983 1.00 29.58 ATOM 62 C LYS X 8 186.224 225.537 165.441 1.00 29.58 ATOM 63 O LYS X 8 186.019 224.388 165.846 1.00 29.58 ATOM 64 CB LYS X 8 188.083 225.955 163.817 1.00 29.58 ATOM 65 CG LYS X 8 188.880 224.920 164.569 1.00 29.58 ATOM 66 CD LYS X 8 190.359 225.196 164.498 1.00 29.58 ATOM 67 CE LYS X 8 190.828 225.231 163.070 1.00 29.58 ATOM 68 NZ LYS X 8 192.223 224.747 162.982 1.00 29.58 ATOM 69 N ARG X 9 186.150 226.597 166.251 1.00 30.30 ATOM 70 CA ARG X 9 185.727 226.425 167.638 1.00 30.30 ATOM 71 C ARG X 9 184.343 225.804 167.707 1.00 30.30 ATOM 72 O ARG X 9 184.122 224.835 168.439 1.00 30.30 ATOM 73 CB ARG X 9 185.739 227.760 168.378 1.00 30.30 ATOM 74 CG ARG X 9 187.115 228.328 168.630 1.00 30.30 ATOM 75 CD ARG X 9 187.024 229.676 169.318 1.00 30.30 ATOM 76 NE ARG X 9 186.455 229.577 170.655 1.00 30.30 ATOM 77 CZ ARG X 9 185.255 230.031 170.988 1.00 30.30 ATOM 78 NH1 ARG X 9 184.491 230.611 170.079 1.00 30.30 ATOM 79 NH2 ARG X 9 184.816 229.901 172.229 1.00 30.30 ATOM 80 N MET X 10 183.400 226.336 166.933 1.00 32.62 ATOM 81 CA MET X 10 182.039 225.826 166.999 1.00 32.62 ATOM 82 C MET X 10 181.932 224.421 166.429 1.00 32.62 ATOM 83 O MET X 10 181.026 223.675 166.809 1.00 32.62 ATOM 84 CB MET X 10 181.087 226.765 166.272 1.00 32.62 ATOM 85 CG MET X 10 179.644 226.597 166.677 1.00 32.62 ATOM 86 SD MET X 10 178.649 227.977 166.106 1.00 32.62 ATOM 87 CE MET X 10 179.335 228.213 164.475 1.00 32.62 ATOM 88 N ARG X 11 182.826 224.041 165.514 1.00 30.01 ATOM 89 CA ARG X 11 182.852 222.654 165.056 1.00 30.01 ATOM 90 C ARG X 11 183.492 221.752 166.099 1.00 30.01 ATOM 91 O ARG X 11 183.040 220.627 166.326 1.00 30.01 ATOM 92 CB ARG X 11 183.597 222.538 163.731 1.00 30.01 ATOM 93 CG ARG X 11 183.032 221.470 162.824 1.00 30.01 ATOM 94 CD ARG X 11 183.948 221.200 161.656 1.00 30.01 ATOM 95 NE ARG X 11 183.833 222.187 160.595 1.00 30.01 ATOM 96 CZ ARG X 11 184.767 222.373 159.672 1.00 30.01 ATOM 97 NH1 ARG X 11 185.868 221.642 159.703 1.00 30.01 ATOM 98 NH2 ARG X 11 184.609 223.285 158.725 1.00 30.01 ATOM 99 N ARG X 12 184.559 222.228 166.734 1.00 33.02 ATOM 100 CA ARG X 12 185.148 221.496 167.846 1.00 33.02 ATOM 101 C ARG X 12 184.148 221.337 168.976 1.00 33.02 ATOM 102 O ARG X 12 184.036 220.264 169.576 1.00 33.02 ATOM 103 CB ARG X 12 186.393 222.230 168.339 1.00 33.02 ATOM 104 CG ARG X 12 186.978 221.698 169.628 1.00 33.02 ATOM 105 CD ARG X 12 188.338 222.321 169.887 1.00 33.02 ATOM 106 NE ARG X 12 189.219 222.181 168.734 1.00 33.02 ATOM 107 CZ ARG X 12 190.183 223.037 168.417 1.00 33.02 ATOM 108 NH1 ARG X 12 190.399 224.108 169.168 1.00 33.02 ATOM 109 NH2 ARG X 12 190.931 222.820 167.347 1.00 33.02 ATOM 110 N LEU X 13 183.401 222.399 169.266 1.00 32.75 ATOM 111 CA LEU X 13 182.500 222.401 170.410 1.00 32.75 ATOM 112 C LEU X 13 181.378 221.390 170.238 1.00 32.75 ATOM 113 O LEU X 13 180.908 220.811 171.221 1.00 32.75 ATOM 114 CB LEU X 13 181.934 223.799 170.610 1.00 32.75 ATOM 115 CG LEU X 13 181.027 223.967 171.810 1.00 32.75 ATOM 116 CD1 LEU X 13 181.831 223.688 173.041 1.00 32.75 ATOM 117 CD2 LEU X 13 180.487 225.370 171.840 1.00 32.75 ATOM 118 N LYS X 14 180.920 221.173 169.005 1.00 34.56 ATOM 119 CA LYS X 14 179.891 220.164 168.788 1.00 34.56 ATOM 120 C LYS X 14 180.389 218.784 169.181 1.00 34.56 ATOM 121 O LYS X 14 179.673 218.027 169.843 1.00 34.56 ATOM 122 CB LYS X 14 179.435 220.165 167.334 1.00 34.56 ATOM 123 CG LYS X 14 178.665 221.391 166.925 1.00 34.56 ATOM 124 CD LYS X 14 177.918 221.133 165.635 1.00 34.56 ATOM 125 CE LYS X 14 178.877 220.838 164.502 1.00 34.56 ATOM 126 NZ LYS X 14 178.170 220.442 163.260 1.00 34.56 ATOM 127 N ARG X 15 181.622 218.443 168.798 1.00 33.54 ATOM 128 CA ARG X 15 182.149 217.120 169.113 1.00 33.54 ATOM 129 C ARG X 15 182.183 216.885 170.617 1.00 33.54 ATOM 130 O ARG X 15 182.072 215.745 171.078 1.00 33.54 ATOM 131 CB ARG X 15 183.536 216.949 168.504 1.00 33.54 ATOM 132 CG ARG X 15 183.982 215.511 168.380 1.00 33.54 ATOM 133 CD ARG X 15 185.463 215.446 168.114 1.00 33.54 ATOM 134 NE ARG X 15 185.833 216.365 167.050 1.00 33.54 ATOM 135 CZ ARG X 15 187.080 216.720 166.770 1.00 33.54 ATOM 136 NH1 ARG X 15 188.083 216.235 167.482 1.00 33.54 ATOM 137 NH2 ARG X 15 187.321 217.564 165.779 1.00 33.54 ATOM 138 N LYS X 16 182.330 217.952 171.398 1.00 32.99 ATOM 139 CA LYS X 16 182.135 217.843 172.838 1.00 32.99 ATOM 140 C LYS X 16 180.703 217.444 173.159 1.00 32.99 ATOM 141 O LYS X 16 180.465 216.636 174.061 1.00 32.99 ATOM 142 CB LYS X 16 182.479 219.172 173.506 1.00 32.99 ATOM 143 CG LYS X 16 182.380 219.206 175.015 1.00 32.99 ATOM 144 CD LYS X 16 183.531 218.467 175.657 1.00 32.99 ATOM 145 CE LYS X 16 183.721 218.894 177.108 1.00 32.99 ATOM 146 NZ LYS X 16 182.560 218.560 177.974 1.00 32.99 ATOM 147 N ARG X 17 179.736 217.999 172.428 1.00 33.67 ATOM 148 CA ARG X 17 178.332 217.761 172.746 1.00 33.67 ATOM 149 C ARG X 17 177.892 216.366 172.328 1.00 33.67 ATOM 150 O ARG X 17 177.117 215.715 173.036 1.00 33.67 ATOM 151 CB ARG X 17 177.467 218.823 172.085 1.00 33.67 ATOM 152 CG ARG X 17 177.686 220.179 172.687 1.00 33.67 ATOM 153 CD ARG X 17 176.888 221.242 171.986 1.00 33.67 ATOM 154 NE ARG X 17 177.163 222.547 172.563 1.00 33.67 ATOM 155 CZ ARG X 17 176.693 223.681 172.072 1.00 33.67 ATOM 156 NH1 ARG X 17 175.938 223.660 170.989 1.00 33.67 ATOM 157 NH2 ARG X 17 176.992 224.832 172.649 1.00 33.67 ATOM 158 N ARG X 18 178.352 215.895 171.170 1.00 37.62 ATOM 159 CA ARG X 18 178.079 214.511 170.804 1.00 37.62 ATOM 160 C ARG X 18 178.741 213.552 171.777 1.00 37.62 ATOM 161 O ARG X 18 178.159 212.526 172.145 1.00 37.62 ATOM 162 CB ARG X 18 178.558 214.221 169.387 1.00 37.62 ATOM 163 CG ARG X 18 177.605 214.635 168.304 1.00 37.62 ATOM 164 CD ARG X 18 178.174 214.236 166.967 1.00 37.62 ATOM 165 NE ARG X 18 179.588 214.566 166.891 1.00 37.62 ATOM 166 CZ ARG X 18 180.112 215.368 165.975 1.00 37.62 ATOM 167 NH1 ARG X 18 179.335 215.914 165.053 1.00 37.62 ATOM 168 NH2 ARG X 18 181.411 215.622 165.979 1.00 37.62 ATOM 169 N LYS X 19 179.964 213.865 172.201 1.00 36.78 ATOM 170 CA LYS X 19 180.702 212.938 173.046 1.00 36.78 ATOM 171 C LYS X 19 180.044 212.796 174.408 1.00 36.78 ATOM 172 O LYS X 19 180.088 211.724 175.016 1.00 36.78 ATOM 173 CB LYS X 19 182.153 213.390 173.182 1.00 36.78 ATOM 174 CG LYS X 19 183.146 212.246 173.249 1.00 36.78 ATOM 175 CD LYS X 19 182.929 211.254 172.114 1.00 36.78 ATOM 176 CE LYS X 19 183.129 211.882 170.746 1.00 36.78 ATOM 177 NZ LYS X 19 182.804 210.918 169.661 1.00 36.78 ATOM 178 N MET X 20 179.420 213.859 174.909 1.00 35.78 ATOM 179 CA MET X 20 178.738 213.693 176.182 1.00 35.78 ATOM 180 C MET X 20 177.287 213.259 176.017 1.00 35.78 ATOM 181 O MET X 20 176.475 213.515 176.910 1.00 35.78 ATOM 182 CB MET X 20 178.808 214.961 177.040 1.00 35.78 ATOM 183 CG MET X 20 178.088 216.179 176.527 1.00 35.78 ATOM 184 SD MET X 20 178.351 217.544 177.678 1.00 35.78 ATOM 185 CE MET X 20 177.440 218.869 176.892 1.00 35.78 ATOM 186 N ARG X 21 176.938 212.626 174.900 1.00 39.56 ATOM 187 CA ARG X 21 175.767 211.763 174.845 1.00 39.56 ATOM 188 C ARG X 21 176.134 210.293 174.805 1.00 39.56 ATOM 189 O ARG X 21 175.244 209.439 174.811 1.00 39.56 ATOM 190 CB ARG X 21 174.897 212.098 173.640 1.00 39.56 ATOM 191 CG ARG X 21 174.092 213.361 173.763 1.00 39.56 ATOM 192 CD ARG X 21 173.385 213.599 172.451 1.00 39.56 ATOM 193 NE ARG X 21 172.696 214.875 172.395 1.00 39.56 ATOM 194 CZ ARG X 21 171.379 214.997 172.462 1.00 39.56 ATOM 195 NH1 ARG X 21 170.620 213.919 172.585 1.00 39.56 ATOM 196 NH2 ARG X 21 170.821 216.192 172.402 1.00 39.56 ATOM 197 N GLN X 22 177.426 209.981 174.767 1.00 44.34 ATOM 198 CA GLN X 22 177.887 208.614 174.955 1.00 44.34 ATOM 199 C GLN X 22 177.759 208.263 176.425 1.00 44.34 ATOM 200 O GLN X 22 177.738 207.088 176.800 1.00 44.34 ATOM 201 CB GLN X 22 179.343 208.455 174.516 1.00 44.34 ATOM 202 CG GLN X 22 179.566 208.099 173.064 1.00 44.34 ATOM 203 CD GLN X 22 181.021 207.775 172.798 1.00 44.34 ATOM 204 OE1 GLN X 22 181.864 207.895 173.688 1.00 44.34 ATOM 205 NE2 GLN X 22 181.324 207.356 171.577 1.00 44.34 ATOM 206 N ARG X 23 177.654 209.287 177.262 1.00 41.84 ATOM 207 CA ARG X 23 177.598 209.083 178.697 1.00 41.84 ATOM 208 C ARG X 23 176.159 208.884 179.157 1.00 41.84 ATOM 209 O ARG X 23 175.908 208.819 180.366 1.00 41.84 ATOM 210 CB ARG X 23 178.236 210.270 179.431 1.00 41.84 ATOM 211 CG ARG X 23 179.709 210.513 179.106 1.00 41.84 ATOM 212 CD ARG X 23 180.573 209.303 179.368 1.00 41.84 ATOM 213 NE ARG X 23 180.558 208.895 180.766 1.00 41.84 ATOM 214 CZ ARG X 23 180.904 207.682 181.183 1.00 41.84 ATOM 215 NH1 ARG X 23 181.293 206.765 180.305 1.00 41.84 ATOM 216 NH2 ARG X 23 180.861 207.382 182.474 1.00 41.84 ATOM 217 N SER X 24 175.219 208.767 178.224 1.00 42.62 ATOM 218 CA SER X 24 173.805 208.632 178.541 1.00 42.62 ATOM 219 C SER X 24 173.029 208.290 177.284 1.00 42.62 ATOM 220 O SER X 24 173.574 207.702 176.354 1.00 42.62 ATOM 221 CB SER X 24 173.258 209.916 179.150 1.00 42.62 ATOM 222 OG SER X 24 173.283 210.961 178.197 1.00 42.62 ATOM 223 OXT SER X 24 171.848 208.601 177.166 1.00 42.62 TER