HEADER DE NOVO PROTEIN 31-DEC-69 7A4T TITLE Crystal structure of the GCN coiled-coil in complex with nanobody COMPND MOL_ID: 1; COMPND 2 MOLECULE: Nanobody Nb39; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 GCN4 isoform 1; COMPND 7 CHAIN: B, C; COMPND 8 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.12 ANGSTORMS DBREF 7A4T A 1 135 PDB 7A4T 7A4T 1 135 DBREF 7A4T B 1 28 UNP A0A6A5PZ A0A6A5PZY2_ 252 279 SEQRES 1 B 27 ACE GLN LEU GLU ASP LYS VAL GLU GLU LEU LEU SER LYS SEQRES 2 B 27 ASN TYR HIS LEU GLU ASN GLU VAL GLU ARG LEU LYS LYS SEQRES 3 B 27 LEU ATOM 1 C ACE B 0 16.294 101.785 158.536 1.00 89.66 ATOM 2 O ACE B 0 17.354 102.380 158.353 1.00 89.37 ATOM 3 CH3 ACE B 0 15.300 102.280 159.582 1.00 86.20 ATOM 4 N GLN B 1 15.939 100.692 157.851 1.00 87.32 ATOM 5 CA GLN B 1 16.821 100.124 156.836 1.00 75.58 ATOM 6 C GLN B 1 17.058 101.092 155.684 1.00 69.32 ATOM 7 O GLN B 1 18.146 101.104 155.093 1.00 63.23 ATOM 8 CB GLN B 1 16.234 98.819 156.309 1.00 74.22 ATOM 9 CG GLN B 1 17.159 98.053 155.398 1.00 77.72 ATOM 10 CD GLN B 1 16.442 96.965 154.636 1.00 83.32 ATOM 11 OE1 GLN B 1 15.218 96.985 154.520 1.00 88.32 ATOM 12 NE2 GLN B 1 17.200 96.007 154.110 1.00 81.33 ATOM 13 N LEU B 2 16.061 101.913 155.355 1.00 53.80 ATOM 14 CA LEU B 2 16.247 102.890 154.294 1.00 48.75 ATOM 15 C LEU B 2 17.089 104.062 154.771 1.00 56.68 ATOM 16 O LEU B 2 17.961 104.544 154.037 1.00 53.15 ATOM 17 CB LEU B 2 14.899 103.393 153.785 1.00 54.50 ATOM 18 CG LEU B 2 14.138 102.541 152.770 1.00 65.83 ATOM 19 CD1 LEU B 2 12.791 103.198 152.494 1.00 69.25 ATOM 20 CD2 LEU B 2 14.927 102.377 151.486 1.00 62.22 ATOM 21 N GLU B 3 16.826 104.553 155.984 1.00 62.52 ATOM 22 CA GLU B 3 17.613 105.667 156.490 1.00 61.77 ATOM 23 C GLU B 3 19.064 105.258 156.680 1.00 51.03 ATOM 24 O GLU B 3 19.964 106.079 156.466 1.00 51.98 ATOM 25 CB GLU B 3 17.015 106.197 157.792 1.00 72.88 ATOM 26 CG GLU B 3 16.361 107.567 157.639 1.00 87.37 ATOM 27 CD GLU B 3 17.376 108.703 157.583 1.00 94.38 ATOM 28 OE1 GLU B 3 18.479 108.544 158.149 1.00 96.21 ATOM 29 OE2 GLU B 3 17.072 109.749 156.967 1.00 90.52 ATOM 30 N ASP B 4 19.301 103.993 157.057 1.00 52.12 ATOM 31 CA ASP B 4 20.655 103.450 157.102 1.00 58.38 ATOM 32 C ASP B 4 21.348 103.576 155.747 1.00 53.44 ATOM 33 O ASP B 4 22.524 103.961 155.683 1.00 50.15 ATOM 34 CB ASP B 4 20.623 101.983 157.545 1.00 68.12 ATOM 35 CG ASP B 4 20.497 101.813 159.062 1.00 76.90 ATOM 36 OD1 ASP B 4 20.358 102.821 159.787 1.00 75.61 ATOM 37 OD2 ASP B 4 20.541 100.653 159.528 1.00 81.17 ATOM 38 N LYS B 5 20.633 103.252 154.658 1.00 45.86 ATOM 39 CA LYS B 5 21.182 103.380 153.302 1.00 46.77 ATOM 40 C LYS B 5 21.537 104.820 152.967 1.00 43.72 ATOM 41 O LYS B 5 22.535 105.075 152.280 1.00 39.74 ATOM 42 CB LYS B 5 20.186 102.871 152.260 1.00 48.61 ATOM 43 CG LYS B 5 20.605 101.597 151.562 1.00 58.17 ATOM 44 CD LYS B 5 21.740 101.808 150.579 1.00 42.85 ATOM 45 CE LYS B 5 22.537 100.510 150.472 1.00 61.85 ATOM 46 NZ LYS B 5 23.443 100.409 149.283 1.00 66.16 ATOM 47 N VAL B 6 20.706 105.770 153.398 1.00 40.79 ATOM 48 CA VAL B 6 20.969 107.180 153.110 1.00 38.73 ATOM 49 C VAL B 6 22.311 107.598 153.704 1.00 45.54 ATOM 50 O VAL B 6 23.151 108.202 153.026 1.00 39.19 ATOM 51 CB VAL B 6 19.819 108.058 153.636 1.00 42.97 ATOM 52 CG1 VAL B 6 20.256 109.507 153.719 1.00 40.95 ATOM 53 CG2 VAL B 6 18.562 107.920 152.744 1.00 34.66 ATOM 54 N GLU B 7 22.545 107.252 154.976 1.00 43.08 ATOM 55 CA GLU B 7 23.808 107.619 155.614 1.00 45.77 ATOM 56 C GLU B 7 24.986 106.922 154.939 1.00 46.70 ATOM 57 O GLU B 7 26.030 107.540 154.709 1.00 43.28 ATOM 58 CB GLU B 7 23.756 107.295 157.114 1.00 46.58 ATOM 59 CG GLU B 7 22.557 107.923 157.837 1.00 70.17 ATOM 60 CD GLU B 7 22.770 108.117 159.349 1.00 93.28 ATOM 61 OE1 GLU B 7 21.776 108.004 160.105 1.00 97.01 ATOM 62 OE2 GLU B 7 23.916 108.385 159.788 1.00 97.80 ATOM 63 N GLU B 8 24.827 105.640 154.605 1.00 48.91 ATOM 64 CA GLU B 8 25.859 104.895 153.883 1.00 49.50 ATOM 65 C GLU B 8 26.267 105.606 152.593 1.00 44.24 ATOM 66 O GLU B 8 27.461 105.775 152.315 1.00 44.38 ATOM 67 CB GLU B 8 25.342 103.482 153.583 1.00 53.41 ATOM 68 CG GLU B 8 26.353 102.509 152.987 1.00 63.12 ATOM 69 CD GLU B 8 25.688 101.244 152.417 1.00 70.46 ATOM 70 OE1 GLU B 8 26.034 100.847 151.280 1.00 70.21 ATOM 71 OE2 GLU B 8 24.817 100.646 153.097 1.00 67.08 ATOM 72 N LEU B 9 25.279 106.036 151.795 1.00 38.36 ATOM 73 CA LEU B 9 25.569 106.680 150.515 1.00 37.40 ATOM 74 C LEU B 9 26.185 108.065 150.695 1.00 38.35 ATOM 75 O LEU B 9 27.095 108.441 149.940 1.00 40.05 ATOM 76 CB LEU B 9 24.298 106.756 149.660 1.00 36.45 ATOM 77 CG LEU B 9 23.817 105.391 149.124 1.00 38.86 ATOM 78 CD1 LEU B 9 22.401 105.416 148.567 1.00 32.66 ATOM 79 CD2 LEU B 9 24.780 104.892 148.076 1.00 41.78 ATOM 80 N LEU B 10 25.694 108.843 151.668 1.00 38.91 ATOM 81 CA LEU B 10 26.308 110.131 151.983 1.00 40.50 ATOM 82 C LEU B 10 27.811 109.991 152.200 1.00 42.88 ATOM 83 O LEU B 10 28.601 110.719 151.595 1.00 43.40 ATOM 84 CB LEU B 10 25.656 110.752 153.224 1.00 41.69 ATOM 85 CG LEU B 10 24.239 111.266 152.997 1.00 40.46 ATOM 86 CD1 LEU B 10 23.583 111.611 154.315 1.00 43.43 ATOM 87 CD2 LEU B 10 24.299 112.457 152.050 1.00 39.65 ATOM 88 N SER B 11 28.223 109.048 153.059 1.00 44.62 ATOM 89 CA SER B 11 29.653 108.825 153.302 1.00 47.48 ATOM 90 C SER B 11 30.368 108.374 152.036 1.00 46.80 ATOM 91 O SER B 11 31.436 108.893 151.707 1.00 48.26 ATOM 92 CB SER B 11 29.866 107.799 154.422 1.00 53.20 ATOM 93 OG SER B 11 29.299 108.246 155.641 1.00 67.49 ATOM 94 N LYS B 12 29.797 107.404 151.309 1.00 44.85 ATOM 95 CA LYS B 12 30.421 106.958 150.058 1.00 46.50 ATOM 96 C LYS B 12 30.588 108.118 149.082 1.00 43.23 ATOM 97 O LYS B 12 31.657 108.301 148.488 1.00 44.33 ATOM 98 CB LYS B 12 29.586 105.844 149.406 1.00 42.78 ATOM 99 CG LYS B 12 29.721 104.484 150.066 1.00 45.59 ATOM 100 CD LYS B 12 28.834 103.405 149.398 1.00 45.77 ATOM 101 CE LYS B 12 29.068 102.038 150.079 1.00 58.02 ATOM 102 NZ LYS B 12 28.227 100.903 149.581 1.00 52.40 ATOM 103 N ASN B 13 29.531 108.913 148.893 1.00 41.13 ATOM 104 CA ASN B 13 29.616 110.024 147.949 1.00 40.12 ATOM 105 C ASN B 13 30.650 111.047 148.399 1.00 42.17 ATOM 106 O ASN B 13 31.366 111.619 147.572 1.00 52.84 ATOM 107 CB ASN B 13 28.238 110.679 147.770 1.00 38.14 ATOM 108 CG ASN B 13 27.263 109.757 147.091 1.00 41.82 ATOM 109 OD1 ASN B 13 27.649 108.687 146.656 1.00 36.51 ATOM 110 ND2 ASN B 13 25.994 110.145 147.022 1.00 40.02 ATOM 111 N TYR B 14 30.745 111.287 149.708 1.00 44.10 ATOM 112 CA TYR B 14 31.715 112.261 150.214 1.00 46.66 ATOM 113 C TYR B 14 33.133 111.823 149.897 1.00 48.55 ATOM 114 O TYR B 14 33.955 112.618 149.438 1.00 55.86 ATOM 115 CB TYR B 14 31.545 112.453 151.724 1.00 48.99 ATOM 116 CG TYR B 14 32.422 113.523 152.354 1.00 55.17 ATOM 117 CD1 TYR B 14 32.332 114.857 151.967 1.00 52.07 ATOM 118 CD2 TYR B 14 33.317 113.200 153.366 1.00 56.67 ATOM 119 CE1 TYR B 14 33.128 115.844 152.576 1.00 55.44 ATOM 120 CE2 TYR B 14 34.114 114.172 153.978 1.00 59.33 ATOM 121 CZ TYR B 14 34.011 115.489 153.583 1.00 62.14 ATOM 122 OH TYR B 14 34.804 116.448 154.188 1.00 71.44 ATOM 123 N HIS B 15 33.439 110.552 150.130 1.00 49.48 ATOM 124 CA HIS B 15 34.789 110.087 149.848 1.00 54.39 ATOM 125 C HIS B 15 35.079 110.132 148.359 1.00 50.06 ATOM 126 O HIS B 15 36.185 110.496 147.949 1.00 53.38 ATOM 127 CB HIS B 15 34.977 108.699 150.434 1.00 55.55 ATOM 128 CG HIS B 15 35.214 108.735 151.908 1.00 77.82 ATOM 129 ND1 HIS B 15 36.136 109.585 152.484 1.00 82.54 ATOM 130 CD2 HIS B 15 34.612 108.082 152.930 1.00 78.77 ATOM 131 CE1 HIS B 15 36.116 109.428 153.795 1.00 82.66 ATOM 132 NE2 HIS B 15 35.201 108.522 154.092 1.00 84.09 ATOM 133 N LEU B 16 34.069 109.853 147.532 1.00 50.22 ATOM 134 CA LEU B 16 34.254 109.944 146.091 1.00 49.16 ATOM 135 C LEU B 16 34.519 111.383 145.660 1.00 49.92 ATOM 136 O LEU B 16 35.357 111.634 144.787 1.00 45.76 ATOM 137 CB LEU B 16 33.026 109.370 145.377 1.00 42.89 ATOM 138 CG LEU B 16 32.945 107.845 145.453 1.00 50.30 ATOM 139 CD1 LEU B 16 31.615 107.350 144.919 1.00 45.63 ATOM 140 CD2 LEU B 16 34.096 107.219 144.682 1.00 54.95 ATOM 141 N GLU B 17 33.800 112.341 146.258 1.00 49.26 ATOM 142 CA GLU B 17 34.040 113.756 145.979 1.00 44.82 ATOM 143 C GLU B 17 35.433 114.178 146.420 1.00 59.12 ATOM 144 O GLU B 17 36.050 115.047 145.793 1.00 61.94 ATOM 145 CB GLU B 17 33.010 114.629 146.697 1.00 46.29 ATOM 146 CG GLU B 17 31.590 114.508 146.184 1.00 56.41 ATOM 147 CD GLU B 17 30.598 115.263 147.057 1.00 70.40 ATOM 148 OE1 GLU B 17 29.698 115.927 146.502 1.00 74.63 ATOM 149 OE2 GLU B 17 30.723 115.198 148.302 1.00 76.72 ATOM 150 N ASN B 18 35.923 113.613 147.525 1.00 58.62 ATOM 151 CA ASN B 18 37.276 113.944 147.960 1.00 63.99 ATOM 152 C ASN B 18 38.310 113.390 146.999 1.00 66.82 ATOM 153 O ASN B 18 39.335 114.034 146.765 1.00 75.86 ATOM 154 CB ASN B 18 37.536 113.425 149.369 1.00 56.55 ATOM 155 CG ASN B 18 36.740 114.172 150.413 1.00 68.01 ATOM 156 OD1 ASN B 18 36.305 115.298 150.182 1.00 67.84 ATOM 157 ND2 ASN B 18 36.541 113.550 151.572 1.00 60.89 ATOM 158 N GLU B 19 38.063 112.209 146.426 1.00 62.45 ATOM 159 CA GLU B 19 38.976 111.703 145.409 1.00 64.47 ATOM 160 C GLU B 19 38.959 112.597 144.181 1.00 64.06 ATOM 161 O GLU B 19 40.017 112.946 143.644 1.00 61.62 ATOM 162 CB GLU B 19 38.616 110.270 145.033 1.00 64.57 ATOM 163 CG GLU B 19 38.896 109.244 146.109 1.00 80.62 ATOM 164 CD GLU B 19 38.625 107.830 145.626 1.00 92.75 ATOM 165 OE1 GLU B 19 39.358 107.365 144.726 1.00 95.58 ATOM 166 OE2 GLU B 19 37.674 107.190 146.133 1.00 93.43 ATOM 167 N VAL B 20 37.767 112.997 143.739 1.00 64.63 ATOM 168 CA VAL B 20 37.660 113.867 142.572 1.00 70.60 ATOM 169 C VAL B 20 38.428 115.160 142.805 1.00 76.96 ATOM 170 O VAL B 20 39.160 115.635 141.927 1.00 75.64 ATOM 171 CB VAL B 20 36.180 114.136 142.246 1.00 70.26 ATOM 172 CG1 VAL B 20 36.011 115.485 141.561 1.00 67.22 ATOM 173 CG2 VAL B 20 35.623 113.021 141.388 1.00 66.91 ATOM 174 N GLU B 21 38.290 115.735 144.000 1.00 81.00 ATOM 175 CA GLU B 21 38.979 116.981 144.308 1.00 76.10 ATOM 176 C GLU B 21 40.490 116.814 144.195 1.00 81.12 ATOM 177 O GLU B 21 41.170 117.635 143.570 1.00 90.30 ATOM 178 CB GLU B 21 38.578 117.464 145.703 1.00 74.49 ATOM 179 N ARG B 22 41.037 115.743 144.776 1.00 83.96 ATOM 180 CA ARG B 22 42.485 115.555 144.733 1.00 92.72 ATOM 181 C ARG B 22 42.958 115.176 143.335 1.00100.84 ATOM 182 O ARG B 22 43.841 115.832 142.773 1.00 99.48 ATOM 183 CB ARG B 22 42.930 114.488 145.729 1.00 97.33 ATOM 184 CG ARG B 22 42.366 114.589 147.136 1.00101.25 ATOM 185 CD ARG B 22 42.259 113.201 147.802 1.00103.17 ATOM 186 NE ARG B 22 43.406 112.334 147.519 1.00105.73 ATOM 187 CZ ARG B 22 43.480 111.477 146.501 1.00104.27 ATOM 188 NH1 ARG B 22 42.473 111.373 145.646 1.00101.81 ATOM 189 NH2 ARG B 22 44.564 110.736 146.326 1.00109.07 ATOM 190 N LEU B 23 42.379 114.118 142.756 1.00106.21 ATOM 191 CA LEU B 23 42.811 113.612 141.455 1.00105.32 ATOM 192 C LEU B 23 42.584 114.603 140.324 1.00112.40 ATOM 193 O LEU B 23 42.989 114.312 139.192 1.00123.44 ATOM 194 CB LEU B 23 42.101 112.296 141.128 1.00 92.92 ATOM 195 CG LEU B 23 42.371 111.111 142.062 1.00 94.27 ATOM 196 CD1 LEU B 23 41.884 109.826 141.425 1.00 91.78 ATOM 197 CD2 LEU B 23 43.843 111.013 142.438 1.00 99.23 ATOM 198 N LYS B 24 41.950 115.745 140.589 1.00107.95 ATOM 199 CA LYS B 24 41.803 116.788 139.584 1.00105.07 ATOM 200 C LYS B 24 43.151 117.444 139.312 1.00117.36 ATOM 201 O LYS B 24 43.749 117.237 138.248 1.00125.74 ATOM 202 CB LYS B 24 40.782 117.830 140.038 1.00 96.44 ATOM 203 CG LYS B 24 39.475 117.802 139.262 1.00 91.70 ATOM 204 CD LYS B 24 38.813 119.175 139.252 1.00 90.08 ATOM 205 CE LYS B 24 37.505 119.170 138.470 1.00 88.67 ATOM 206 NZ LYS B 24 36.442 118.354 139.122 1.00 88.85 ATOM 207 N LYS B 25 43.632 118.238 140.272 1.00114.73 ATOM 208 CA LYS B 25 44.964 118.825 140.166 1.00107.35 ATOM 209 C LYS B 25 46.015 117.743 139.937 1.00106.79 ATOM 210 O LYS B 25 46.717 117.741 138.920 1.00106.87 ATOM 211 CB LYS B 25 45.276 119.632 141.427 1.00102.11 ATOM 212 N LEU B 26 46.118 116.801 140.871 1.00105.80 ATOM 213 CA LEU B 26 47.009 115.654 140.724 1.00105.10 ATOM 214 C LEU B 26 46.493 114.701 139.648 1.00109.73 ATOM 215 O LEU B 26 47.229 114.304 138.744 1.00112.28 ATOM 216 CB LEU B 26 47.159 114.913 142.055 1.00101.62 ATOM 217 S SO4 B 203 22.794 96.004 151.535 1.00101.28 ATOM 218 O1 SO4 B 203 23.426 96.838 150.510 1.00103.43 ATOM 219 O2 SO4 B 203 21.567 95.395 151.040 1.00101.54 ATOM 220 O3 SO4 B 203 23.700 94.924 151.915 1.00105.05 ATOM 221 O4 SO4 B 203 22.469 96.854 152.676 1.00104.42 ATOM 222 S SO4 B 101 39.079 110.633 151.571 1.00108.31 ATOM 223 O1 SO4 B 101 38.316 110.342 150.357 1.00115.74 ATOM 224 O2 SO4 B 101 40.490 110.789 151.219 1.00110.56 ATOM 225 O3 SO4 B 101 38.914 109.538 152.531 1.00 99.93 ATOM 226 O4 SO4 B 101 38.600 111.884 152.150 1.00104.28 TER