HEADER METAL BINDING PROTEIN 31-DEC-69 7BQU TITLE Cereblon in complex with SALL4 and (S)-thalidomide COMPND MOL_ID: 1; COMPND 2 MOLECULE: Protein cereblon; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 Sal-like protein 4; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.90 ANGSTORMS DBREF 7BQU A 318 426 UNP Q96SW2 CRBN_HUMAN 318 426 DBREF 7BQU B 410 432 UNP Q9UJQ4 SALL4_HUMAN 410 432 SEQRES 1 B 24 SER PHE VAL CYS SER VAL CYS GLY HIS ARG PHE THR THR SEQRES 2 B 24 LYS GLY ASN LEU LYS VAL HIS PHE HIS ARG HIS ATOM 1 N SER B 409 28.852 5.010 4.458 1.00 60.46 ATOM 2 CA SER B 409 28.553 6.269 3.750 1.00 59.14 ATOM 3 C SER B 409 27.134 6.902 3.929 1.00 52.82 ATOM 4 O SER B 409 26.892 8.056 3.482 1.00 52.61 ATOM 5 CB SER B 409 28.833 5.805 2.334 1.00 61.93 ATOM 6 OG SER B 409 30.239 5.342 2.583 1.00 67.82 ATOM 7 N PHE B 410 26.461 6.430 4.978 1.00 46.72 ATOM 8 CA PHE B 410 25.086 6.779 5.152 1.00 34.20 ATOM 9 C PHE B 410 24.952 7.459 6.494 1.00 33.72 ATOM 10 O PHE B 410 25.254 6.860 7.530 1.00 36.53 ATOM 11 CB PHE B 410 24.246 5.523 5.033 1.00 32.21 ATOM 12 CG PHE B 410 24.438 4.772 3.735 1.00 38.57 ATOM 13 CD1 PHE B 410 25.439 3.826 3.610 1.00 40.83 ATOM 14 CD2 PHE B 410 23.602 5.004 2.652 1.00 41.45 ATOM 15 CE1 PHE B 410 25.611 3.127 2.433 1.00 41.59 ATOM 16 CE2 PHE B 410 23.768 4.306 1.469 1.00 40.68 ATOM 17 CZ PHE B 410 24.775 3.366 1.361 1.00 40.65 ATOM 18 N VAL B 411 24.463 8.695 6.469 1.00 24.31 ATOM 19 CA VAL B 411 24.448 9.572 7.634 1.00 26.53 ATOM 20 C VAL B 411 23.014 9.888 8.024 1.00 26.08 ATOM 21 O VAL B 411 22.229 10.370 7.198 1.00 26.24 ATOM 22 CB VAL B 411 25.209 10.880 7.373 1.00 30.09 ATOM 23 CG1 VAL B 411 25.502 11.595 8.693 1.00 25.84 ATOM 24 CG2 VAL B 411 26.469 10.614 6.592 1.00 38.21 ATOM 25 N CYS B 412 22.695 9.679 9.295 1.00 21.60 ATOM 26 CA CYS B 412 21.394 10.062 9.816 1.00 22.71 ATOM 27 C CYS B 412 21.214 11.570 9.744 1.00 22.68 ATOM 28 O CYS B 412 22.046 12.331 10.246 1.00 21.46 ATOM 29 CB CYS B 412 21.251 9.592 11.258 1.00 15.84 ATOM 30 SG CYS B 412 19.655 10.028 11.961 1.00 23.75 ATOM 31 N SER B 413 20.108 12.005 9.137 1.00 21.51 ATOM 32 CA SER B 413 19.879 13.439 9.013 1.00 25.24 ATOM 33 C SER B 413 19.507 14.081 10.346 1.00 23.87 ATOM 34 O SER B 413 19.682 15.297 10.500 1.00 24.28 ATOM 35 CB SER B 413 18.799 13.716 7.964 1.00 24.52 ATOM 36 OG SER B 413 17.615 12.983 8.233 1.00 34.45 ATOM 37 N VAL B 414 19.022 13.297 11.310 1.00 19.23 ATOM 38 CA VAL B 414 18.616 13.847 12.601 1.00 23.10 ATOM 39 C VAL B 414 19.811 14.012 13.530 1.00 22.51 ATOM 40 O VAL B 414 19.927 15.024 14.231 1.00 20.19 ATOM 41 CB VAL B 414 17.536 12.954 13.241 1.00 17.13 ATOM 42 CG1 VAL B 414 17.103 13.511 14.591 1.00 20.14 ATOM 43 CG2 VAL B 414 16.346 12.801 12.307 1.00 25.15 ATOM 44 N CYS B 415 20.709 13.022 13.564 1.00 22.99 ATOM 45 CA CYS B 415 21.692 12.915 14.632 1.00 21.98 ATOM 46 C CYS B 415 23.143 12.937 14.170 1.00 25.71 ATOM 47 O CYS B 415 24.023 13.185 15.000 1.00 22.51 ATOM 48 CB CYS B 415 21.458 11.629 15.441 1.00 30.55 ATOM 49 SG CYS B 415 21.891 10.176 14.624 1.00 28.42 ATOM 50 N GLY B 416 23.423 12.669 12.897 1.00 18.81 ATOM 51 CA GLY B 416 24.790 12.575 12.425 1.00 21.17 ATOM 52 C GLY B 416 25.412 11.198 12.540 1.00 23.27 ATOM 53 O GLY B 416 26.558 11.018 12.113 1.00 22.87 ATOM 54 N HIS B 417 24.704 10.237 13.124 1.00 21.30 ATOM 55 CA HIS B 417 25.195 8.867 13.237 1.00 22.94 ATOM 56 C HIS B 417 25.452 8.290 11.852 1.00 28.36 ATOM 57 O HIS B 417 24.590 8.343 10.970 1.00 24.60 ATOM 58 CB HIS B 417 24.152 8.045 13.986 1.00 26.65 ATOM 59 CG HIS B 417 24.604 6.696 14.438 1.00 25.48 ATOM 60 ND1 HIS B 417 24.184 6.149 15.631 1.00 24.98 ATOM 61 CD2 HIS B 417 25.385 5.760 13.848 1.00 26.99 ATOM 62 CE1 HIS B 417 24.702 4.941 15.766 1.00 32.66 ATOM 63 NE2 HIS B 417 25.436 4.681 14.697 1.00 30.04 ATOM 64 N ARG B 418 26.639 7.742 11.656 1.00 26.97 ATOM 65 CA ARG B 418 27.025 7.255 10.346 1.00 29.63 ATOM 66 C ARG B 418 26.946 5.739 10.273 1.00 35.90 ATOM 67 O ARG B 418 27.247 5.041 11.246 1.00 27.02 ATOM 68 CB ARG B 418 28.425 7.696 10.017 1.00 36.68 ATOM 69 CG ARG B 418 28.686 7.554 8.663 1.00 49.81 ATOM 70 CD ARG B 418 30.042 7.935 8.589 1.00 57.27 ATOM 71 NE ARG B 418 30.096 8.729 7.373 1.00 65.93 ATOM 72 CZ ARG B 418 30.441 9.921 7.331 1.00 60.92 ATOM 73 NH1 ARG B 418 30.591 10.353 8.480 1.00 60.69 ATOM 74 NH2 ARG B 418 30.744 10.588 6.214 1.00 56.79 ATOM 75 N PHE B 419 26.553 5.244 9.104 1.00 35.03 ATOM 76 CA PHE B 419 26.289 3.834 8.876 1.00 38.15 ATOM 77 C PHE B 419 26.974 3.395 7.593 1.00 39.35 ATOM 78 O PHE B 419 27.244 4.207 6.704 1.00 37.98 ATOM 79 CB PHE B 419 24.784 3.571 8.779 1.00 35.06 ATOM 80 CG PHE B 419 24.054 3.824 10.056 1.00 35.49 ATOM 81 CD1 PHE B 419 23.989 2.840 11.022 1.00 32.27 ATOM 82 CD2 PHE B 419 23.445 5.043 10.298 1.00 32.99 ATOM 83 CE1 PHE B 419 23.329 3.060 12.202 1.00 30.87 ATOM 84 CE2 PHE B 419 22.777 5.269 11.485 1.00 27.26 ATOM 85 CZ PHE B 419 22.723 4.273 12.436 1.00 27.62 ATOM 86 N THR B 420 27.250 2.097 7.492 1.00 40.05 ATOM 87 CA THR B 420 27.852 1.581 6.271 1.00 41.31 ATOM 88 C THR B 420 26.846 0.912 5.342 1.00 38.90 ATOM 89 O THR B 420 27.205 0.580 4.208 1.00 44.89 ATOM 90 CB THR B 420 28.993 0.609 6.597 1.00 40.02 ATOM 91 OG1 THR B 420 28.519 -0.425 7.467 1.00 50.32 ATOM 92 CG2 THR B 420 30.146 1.354 7.273 1.00 46.51 ATOM 93 N THR B 421 25.602 0.731 5.779 1.00 32.29 ATOM 94 CA THR B 421 24.528 0.198 4.952 1.00 39.67 ATOM 95 C THR B 421 23.362 1.183 4.936 1.00 42.74 ATOM 96 O THR B 421 23.121 1.889 5.919 1.00 34.73 ATOM 97 CB THR B 421 24.053 -1.168 5.482 1.00 39.03 ATOM 98 OG1 THR B 421 24.091 -1.158 6.910 1.00 48.82 ATOM 99 CG2 THR B 421 24.957 -2.284 4.993 1.00 46.46 ATOM 100 N LYS B 422 22.649 1.254 3.802 1.00 41.49 ATOM 101 CA LYS B 422 21.427 2.059 3.761 1.00 35.36 ATOM 102 C LYS B 422 20.355 1.454 4.660 1.00 33.48 ATOM 103 O LYS B 422 19.602 2.184 5.316 1.00 34.89 ATOM 104 CB LYS B 422 20.914 2.197 2.316 1.00 36.94 ATOM 105 CG LYS B 422 19.817 3.284 2.062 1.00 45.63 ATOM 106 CD LYS B 422 19.445 3.378 0.555 1.00 45.87 ATOM 107 CE LYS B 422 18.471 4.526 0.198 1.00 51.10 ATOM 108 NZ LYS B 422 18.987 5.915 0.419 1.00 54.70 ATOM 109 N GLY B 423 20.289 0.120 4.719 1.00 35.27 ATOM 110 CA GLY B 423 19.280 -0.532 5.539 1.00 33.43 ATOM 111 C GLY B 423 19.440 -0.240 7.019 1.00 29.00 ATOM 112 O GLY B 423 18.452 -0.036 7.729 1.00 32.15 ATOM 113 N ASN B 424 20.685 -0.228 7.507 1.00 25.94 ATOM 114 CA ASN B 424 20.939 0.170 8.890 1.00 26.75 ATOM 115 C ASN B 424 20.438 1.586 9.144 1.00 26.98 ATOM 116 O ASN B 424 19.791 1.862 10.163 1.00 28.56 ATOM 117 CB ASN B 424 22.435 0.093 9.200 1.00 30.68 ATOM 118 CG ASN B 424 22.907 -1.312 9.494 1.00 41.92 ATOM 119 OD1 ASN B 424 22.136 -2.269 9.426 1.00 34.03 ATOM 120 ND2 ASN B 424 24.194 -1.447 9.805 1.00 45.77 ATOM 121 N LEU B 425 20.752 2.505 8.231 1.00 27.49 ATOM 122 CA LEU B 425 20.317 3.889 8.393 1.00 28.78 ATOM 123 C LEU B 425 18.799 3.985 8.455 1.00 30.51 ATOM 124 O LEU B 425 18.252 4.717 9.289 1.00 31.81 ATOM 125 CB LEU B 425 20.869 4.747 7.253 1.00 25.33 ATOM 126 CG LEU B 425 20.309 6.173 7.155 1.00 29.62 ATOM 127 CD1 LEU B 425 20.493 6.915 8.467 1.00 25.78 ATOM 128 CD2 LEU B 425 20.959 6.935 6.016 1.00 32.92 ATOM 129 N LYS B 426 18.100 3.251 7.588 1.00 32.30 ATOM 130 CA LYS B 426 16.643 3.303 7.585 1.00 31.92 ATOM 131 C LYS B 426 16.071 2.880 8.934 1.00 30.70 ATOM 132 O LYS B 426 15.171 3.534 9.469 1.00 31.59 ATOM 133 CB LYS B 426 16.082 2.425 6.467 1.00 42.12 ATOM 134 CG LYS B 426 14.572 2.526 6.343 1.00 45.85 ATOM 135 CD LYS B 426 13.973 1.216 5.894 1.00 54.16 ATOM 136 CE LYS B 426 14.459 0.083 6.763 1.00 55.58 ATOM 137 NZ LYS B 426 13.309 -0.709 7.183 1.00 62.71 ATOM 138 N VAL B 427 16.575 1.778 9.495 1.00 31.31 ATOM 139 CA VAL B 427 16.058 1.305 10.778 1.00 28.12 ATOM 140 C VAL B 427 16.329 2.335 11.866 1.00 30.33 ATOM 141 O VAL B 427 15.429 2.718 12.625 1.00 28.04 ATOM 142 CB VAL B 427 16.667 -0.065 11.132 1.00 25.70 ATOM 143 CG1 VAL B 427 16.369 -0.407 12.577 1.00 29.42 ATOM 144 CG2 VAL B 427 16.123 -1.132 10.206 1.00 27.35 ATOM 145 N HIS B 428 17.575 2.801 11.952 1.00 25.89 ATOM 146 CA HIS B 428 17.935 3.800 12.952 1.00 25.04 ATOM 147 C HIS B 428 17.097 5.058 12.794 1.00 28.77 ATOM 148 O HIS B 428 16.553 5.583 13.773 1.00 24.76 ATOM 149 CB HIS B 428 19.417 4.140 12.833 1.00 26.11 ATOM 150 CG HIS B 428 19.805 5.407 13.533 1.00 24.23 ATOM 151 ND1 HIS B 428 20.220 5.430 14.847 1.00 27.77 ATOM 152 CD2 HIS B 428 19.852 6.692 13.102 1.00 26.80 ATOM 153 CE1 HIS B 428 20.499 6.674 15.198 1.00 30.50 ATOM 154 NE2 HIS B 428 20.281 7.460 14.159 1.00 22.89 ATOM 155 N PHE B 429 16.985 5.556 11.560 1.00 27.90 ATOM 156 CA PHE B 429 16.267 6.803 11.325 1.00 28.30 ATOM 157 C PHE B 429 14.849 6.735 11.866 1.00 28.98 ATOM 158 O PHE B 429 14.363 7.691 12.481 1.00 34.51 ATOM 159 CB PHE B 429 16.237 7.127 9.832 1.00 26.20 ATOM 160 CG PHE B 429 15.501 8.394 9.515 1.00 30.92 ATOM 161 CD1 PHE B 429 16.152 9.609 9.577 1.00 34.61 ATOM 162 CD2 PHE B 429 14.155 8.372 9.181 1.00 36.03 ATOM 163 CE1 PHE B 429 15.484 10.786 9.297 1.00 34.38 ATOM 164 CE2 PHE B 429 13.479 9.545 8.905 1.00 34.95 ATOM 165 CZ PHE B 429 14.145 10.752 8.961 1.00 31.23 ATOM 166 N HIS B 430 14.166 5.620 11.644 1.00 34.79 ATOM 167 CA HIS B 430 12.775 5.518 12.052 1.00 35.46 ATOM 168 C HIS B 430 12.613 5.304 13.551 1.00 37.98 ATOM 169 O HIS B 430 11.479 5.303 14.040 1.00 42.33 ATOM 170 CB HIS B 430 12.089 4.410 11.251 1.00 43.66 ATOM 171 CG HIS B 430 11.837 4.786 9.822 1.00 52.95 ATOM 172 ND1 HIS B 430 12.720 4.489 8.805 1.00 54.71 ATOM 173 CD2 HIS B 430 10.818 5.468 9.247 1.00 53.02 ATOM 174 CE1 HIS B 430 12.247 4.956 7.663 1.00 54.10 ATOM 175 NE2 HIS B 430 11.094 5.554 7.903 1.00 59.61 ATOM 176 N ARG B 431 13.712 5.150 14.295 1.00 33.80 ATOM 177 CA ARG B 431 13.630 5.159 15.750 1.00 35.92 ATOM 178 C ARG B 431 13.524 6.565 16.321 1.00 37.93 ATOM 179 O ARG B 431 13.099 6.720 17.471 1.00 44.73 ATOM 180 CB ARG B 431 14.848 4.468 16.362 1.00 38.37 ATOM 181 CG ARG B 431 14.850 2.963 16.220 1.00 43.24 ATOM 182 CD ARG B 431 16.230 2.396 16.510 1.00 47.20 ATOM 183 NE ARG B 431 16.760 2.848 17.795 1.00 48.74 ATOM 184 CZ ARG B 431 16.444 2.302 18.966 1.00 44.35 ATOM 185 NH1 ARG B 431 15.596 1.283 19.019 1.00 49.22 ATOM 186 NH2 ARG B 431 16.976 2.773 20.085 1.00 37.72 ATOM 187 N HIS B 432 13.899 7.587 15.558 1.00 33.00 ATOM 188 CA HIS B 432 13.915 8.950 16.074 1.00 36.00 ATOM 189 C HIS B 432 12.509 9.448 16.384 1.00 46.30 ATOM 190 O HIS B 432 12.295 10.127 17.387 1.00 53.42 ATOM 191 CB HIS B 432 14.597 9.891 15.081 1.00 33.42 ATOM 192 CG HIS B 432 16.088 9.908 15.197 1.00 30.18 ATOM 193 ND1 HIS B 432 16.740 10.311 16.342 1.00 27.21 ATOM 194 CD2 HIS B 432 17.055 9.564 14.315 1.00 28.21 ATOM 195 CE1 HIS B 432 18.045 10.223 16.158 1.00 26.31 ATOM 196 NE2 HIS B 432 18.262 9.773 14.936 1.00 21.27 ATOM 197 OXT HIS B 432 11.558 9.181 15.651 1.00 44.77 ATOM 198 O01 EF2 B 501 24.770 20.107 13.484 1.00 25.49 ATOM 199 C02 EF2 B 501 25.256 19.574 14.483 1.00 22.34 ATOM 200 N03 EF2 B 501 26.099 20.348 15.279 1.00 20.80 ATOM 201 C04 EF2 B 501 26.696 19.804 16.435 1.00 25.49 ATOM 202 O05 EF2 B 501 27.431 20.516 17.114 1.00 22.54 ATOM 203 C06 EF2 B 501 26.440 18.471 16.788 1.00 19.81 ATOM 204 C07 EF2 B 501 26.195 17.657 15.531 1.00 24.77 ATOM 205 C08 EF2 B 501 25.000 18.226 14.779 1.00 21.66 ATOM 206 N09 EF2 B 501 24.755 17.432 13.535 1.00 22.74 ATOM 207 C11 EF2 B 501 24.935 15.454 9.493 1.00 26.75 ATOM 208 C12 EF2 B 501 25.638 16.299 10.342 1.00 28.05 ATOM 209 C13 EF2 B 501 25.134 16.625 11.536 1.00 25.72 ATOM 210 C14 EF2 B 501 23.952 16.153 11.946 1.00 27.82 ATOM 211 O16 EF2 B 501 26.677 18.004 12.480 1.00 23.51 ATOM 212 O18 EF2 B 501 22.739 16.428 13.852 1.00 20.70 ATOM 213 C19 EF2 B 501 23.232 15.339 11.167 1.00 23.71 ATOM 214 C20 EF2 B 501 23.707 14.962 9.915 1.00 24.71 ATOM 215 C3 EF2 B 501 23.735 16.658 13.165 1.00 23.66 ATOM 216 C4 EF2 B 501 25.603 17.396 12.515 1.00 23.69 ATOM 217 ZN ZN B 501 19.913 9.493 14.093 1.00 22.81 TER