HEADER OXIDOREDUCTASE 31-DEC-69 7DH0 TITLE Activity optimized complex I (open form) COMPND MOL_ID: 39; COMPND 2 MOLECULE: NADH dehydrogenase [ubiquinone] 1 subunit C1, COMPND 3 CHAIN: i; EXPDTA ELECTRON MICROSCOPY DBREF 7DH0 i 28 76 UNP Q02376 NDUC1_BOVIN 28 76 SEQRES 1 i 38 HIS GLY SER PRO ASN TRP LEU LYS VAL GLY LEU THR LEU SEQRES 2 i 38 GLY THR SER VAL PHE LEU TRP ILE TYR LEU ILE LYS GLN SEQRES 3 i 38 HIS ASN GLU ASP VAL LEU GLU TYR LYS ARG ARG ASN ATOM 1 N HIS i 36 198.373 132.854 248.678 1.00209.39 ATOM 2 CA HIS i 36 199.562 132.010 248.679 1.00209.39 ATOM 3 C HIS i 36 200.744 132.698 248.005 1.00209.39 ATOM 4 O HIS i 36 200.827 133.926 247.958 1.00209.39 ATOM 5 CB HIS i 36 199.276 130.678 247.978 1.00209.39 ATOM 6 CG HIS i 36 198.313 129.798 248.713 1.00209.39 ATOM 7 ND1 HIS i 36 198.671 129.070 249.827 1.00209.39 ATOM 8 CD2 HIS i 36 197.005 129.528 248.492 1.00209.39 ATOM 9 CE1 HIS i 36 197.625 128.389 250.261 1.00209.39 ATOM 10 NE2 HIS i 36 196.601 128.650 249.468 1.00209.39 ATOM 11 N GLY i 37 201.661 131.886 247.502 1.00186.86 ATOM 12 CA GLY i 37 202.781 132.369 246.709 1.00186.86 ATOM 13 C GLY i 37 202.941 131.511 245.470 1.00186.86 ATOM 14 O GLY i 37 203.070 130.290 245.566 1.00186.86 ATOM 15 N SER i 38 202.932 132.157 244.306 1.00170.71 ATOM 16 CA SER i 38 203.014 131.466 243.020 1.00170.71 ATOM 17 C SER i 38 204.176 131.992 242.188 1.00170.71 ATOM 18 O SER i 38 203.977 132.803 241.273 1.00170.71 ATOM 19 CB SER i 38 201.704 131.609 242.247 1.00170.71 ATOM 20 OG SER i 38 201.801 131.019 240.963 1.00170.71 ATOM 21 N PRO i 39 205.415 131.548 242.470 1.00163.83 ATOM 22 CA PRO i 39 206.495 131.791 241.508 1.00163.83 ATOM 23 C PRO i 39 206.538 130.687 240.466 1.00163.83 ATOM 24 O PRO i 39 205.679 129.800 240.468 1.00163.83 ATOM 25 CB PRO i 39 207.751 131.793 242.385 1.00163.83 ATOM 26 CG PRO i 39 207.421 130.849 243.465 1.00163.83 ATOM 27 CD PRO i 39 205.944 130.993 243.731 1.00163.83 ATOM 28 N ASN i 40 207.520 130.730 239.567 1.00154.77 ATOM 29 CA ASN i 40 207.692 129.645 238.609 1.00154.77 ATOM 30 C ASN i 40 208.607 128.550 239.135 1.00154.77 ATOM 31 O ASN i 40 208.724 127.502 238.489 1.00154.77 ATOM 32 CB ASN i 40 208.239 130.187 237.289 1.00154.77 ATOM 33 N TRP i 41 209.285 128.800 240.261 1.00156.69 ATOM 34 CA TRP i 41 210.094 127.839 241.020 1.00156.69 ATOM 35 C TRP i 41 211.295 127.297 240.242 1.00156.69 ATOM 36 O TRP i 41 211.907 126.309 240.661 1.00156.69 ATOM 37 CB TRP i 41 209.245 126.671 241.542 1.00156.69 ATOM 38 CG TRP i 41 208.287 127.045 242.629 1.00156.69 ATOM 39 CD1 TRP i 41 206.966 127.349 242.489 1.00156.69 ATOM 40 CD2 TRP i 41 208.574 127.139 244.028 1.00156.69 ATOM 41 NE1 TRP i 41 206.412 127.629 243.713 1.00156.69 ATOM 42 CE2 TRP i 41 207.379 127.509 244.675 1.00156.69 ATOM 43 CE3 TRP i 41 209.726 126.949 244.796 1.00156.69 ATOM 44 CZ2 TRP i 41 207.302 127.694 246.053 1.00156.69 ATOM 45 CZ3 TRP i 41 209.648 127.131 246.164 1.00156.69 ATOM 46 CH2 TRP i 41 208.444 127.500 246.779 1.00156.69 ATOM 47 N LEU i 42 211.661 127.919 239.122 1.00128.82 ATOM 48 CA LEU i 42 212.825 127.506 238.352 1.00128.82 ATOM 49 C LEU i 42 213.895 128.589 238.329 1.00128.82 ATOM 50 O LEU i 42 215.024 128.360 238.769 1.00128.82 ATOM 51 CB LEU i 42 212.392 127.132 236.923 1.00128.82 ATOM 52 CG LEU i 42 213.360 126.472 235.928 1.00128.82 ATOM 53 CD1 LEU i 42 212.589 125.518 235.033 1.00128.82 ATOM 54 CD2 LEU i 42 214.092 127.486 235.056 1.00128.82 ATOM 55 N LYS i 43 213.555 129.776 237.843 1.00118.64 ATOM 56 CA LYS i 43 214.518 130.853 237.688 1.00118.64 ATOM 57 C LYS i 43 214.775 131.613 238.979 1.00118.64 ATOM 58 O LYS i 43 215.855 132.193 239.132 1.00118.64 ATOM 59 CB LYS i 43 214.042 131.815 236.593 1.00118.64 ATOM 60 CG LYS i 43 212.688 132.451 236.863 1.00118.64 ATOM 61 CD LYS i 43 212.236 133.309 235.698 1.00118.64 ATOM 62 CE LYS i 43 210.894 133.959 235.990 1.00118.64 ATOM 63 NZ LYS i 43 209.795 132.959 236.073 1.00118.64 ATOM 64 N VAL i 44 213.821 131.621 239.907 1.00115.64 ATOM 65 CA VAL i 44 214.012 132.287 241.187 1.00115.64 ATOM 66 C VAL i 44 214.940 131.415 242.017 1.00115.64 ATOM 67 O VAL i 44 214.572 130.311 242.430 1.00115.64 ATOM 68 CB VAL i 44 212.676 132.536 241.905 1.00115.64 ATOM 69 CG1 VAL i 44 212.919 133.195 243.249 1.00115.64 ATOM 70 CG2 VAL i 44 211.767 133.391 241.042 1.00115.64 ATOM 71 N GLY i 45 216.157 131.905 242.254 1.00118.33 ATOM 72 CA GLY i 45 217.230 131.123 242.839 1.00118.33 ATOM 73 C GLY i 45 218.395 130.923 241.892 1.00118.33 ATOM 74 O GLY i 45 219.546 130.859 242.335 1.00118.33 ATOM 75 N LEU i 46 218.113 130.818 240.591 1.00113.49 ATOM 76 CA LEU i 46 219.184 130.843 239.604 1.00113.49 ATOM 77 C LEU i 46 219.823 132.218 239.536 1.00113.49 ATOM 78 O LEU i 46 221.039 132.336 239.357 1.00113.49 ATOM 79 CB LEU i 46 218.652 130.443 238.232 1.00113.49 ATOM 80 CG LEU i 46 218.231 128.989 238.069 1.00113.49 ATOM 81 CD1 LEU i 46 217.597 128.784 236.705 1.00113.49 ATOM 82 CD2 LEU i 46 219.430 128.075 238.253 1.00113.49 ATOM 83 N THR i 47 219.015 133.270 239.671 1.00114.21 ATOM 84 CA THR i 47 219.549 134.625 239.692 1.00114.21 ATOM 85 C THR i 47 220.353 134.880 240.954 1.00114.21 ATOM 86 O THR i 47 221.400 135.534 240.906 1.00114.21 ATOM 87 CB THR i 47 218.412 135.634 239.609 1.00114.21 ATOM 88 OG1 THR i 47 217.651 135.574 240.818 1.00114.21 ATOM 89 CG2 THR i 47 217.499 135.303 238.442 1.00114.21 ATOM 90 N LEU i 48 219.887 134.362 242.083 1.00117.28 ATOM 91 CA LEU i 48 220.557 134.575 243.353 1.00117.28 ATOM 92 C LEU i 48 221.817 133.736 243.496 1.00117.28 ATOM 93 O LEU i 48 222.724 134.127 244.237 1.00117.28 ATOM 94 CB LEU i 48 219.589 134.264 244.494 1.00117.28 ATOM 95 CG LEU i 48 218.303 135.096 244.477 1.00117.28 ATOM 96 CD1 LEU i 48 217.348 134.651 245.576 1.00117.28 ATOM 97 CD2 LEU i 48 218.602 136.583 244.581 1.00117.28 ATOM 98 N GLY i 49 221.902 132.610 242.797 1.00117.29 ATOM 99 CA GLY i 49 223.061 131.750 242.898 1.00117.29 ATOM 100 C GLY i 49 224.139 132.104 241.900 1.00117.29 ATOM 101 O GLY i 49 225.328 131.907 242.165 1.00117.29 ATOM 102 N THR i 50 223.731 132.623 240.741 1.00113.95 ATOM 103 CA THR i 50 224.692 133.087 239.748 1.00113.95 ATOM 104 C THR i 50 225.437 134.311 240.257 1.00113.95 ATOM 105 O THR i 50 226.628 134.478 239.974 1.00113.95 ATOM 106 CB THR i 50 223.973 133.409 238.437 1.00113.95 ATOM 107 OG1 THR i 50 223.166 132.290 238.056 1.00113.95 ATOM 108 CG2 THR i 50 224.961 133.686 237.315 1.00113.95 ATOM 109 N SER i 51 224.747 135.157 241.028 1.00114.41 ATOM 110 CA SER i 51 225.355 136.372 241.556 1.00114.41 ATOM 111 C SER i 51 226.475 136.045 242.528 1.00114.41 ATOM 112 O SER i 51 227.592 136.557 242.397 1.00114.41 ATOM 113 CB SER i 51 224.297 137.240 242.237 1.00114.41 ATOM 114 OG SER i 51 223.351 137.724 241.304 1.00114.41 ATOM 115 N VAL i 52 226.194 135.164 243.492 1.00119.07 ATOM 116 CA VAL i 52 227.188 134.731 244.470 1.00119.07 ATOM 117 C VAL i 52 228.328 133.992 243.784 1.00119.07 ATOM 118 O VAL i 52 229.491 134.106 244.194 1.00119.07 ATOM 119 CB VAL i 52 226.491 133.871 245.544 1.00119.07 ATOM 120 CG1 VAL i 52 227.474 133.356 246.591 1.00119.07 ATOM 121 CG2 VAL i 52 225.383 134.670 246.203 1.00119.07 ATOM 122 N PHE i 53 228.019 133.262 242.708 1.00117.66 ATOM 123 CA PHE i 53 229.056 132.711 241.841 1.00117.66 ATOM 124 C PHE i 53 229.907 133.812 241.225 1.00117.66 ATOM 125 O PHE i 53 231.136 133.696 241.167 1.00117.66 ATOM 126 CB PHE i 53 228.420 131.856 240.748 1.00117.66 ATOM 127 CG PHE i 53 229.395 131.362 239.729 1.00117.66 ATOM 128 CD1 PHE i 53 230.291 130.358 240.048 1.00117.66 ATOM 129 CD2 PHE i 53 229.415 131.899 238.453 1.00117.66 ATOM 130 CE1 PHE i 53 231.193 129.900 239.115 1.00117.66 ATOM 131 CE2 PHE i 53 230.316 131.447 237.516 1.00117.66 ATOM 132 CZ PHE i 53 231.205 130.445 237.846 1.00117.66 ATOM 133 N LEU i 54 229.273 134.895 240.776 1.00116.96 ATOM 134 CA LEU i 54 230.035 136.030 240.273 1.00116.96 ATOM 135 C LEU i 54 230.641 136.827 241.419 1.00116.96 ATOM 136 O LEU i 54 231.652 137.512 241.237 1.00116.96 ATOM 137 CB LEU i 54 229.150 136.911 239.396 1.00116.96 ATOM 138 CG LEU i 54 228.691 136.224 238.109 1.00116.96 ATOM 139 CD1 LEU i 54 227.760 137.124 237.324 1.00116.96 ATOM 140 CD2 LEU i 54 229.875 135.789 237.265 1.00116.96 ATOM 141 N TRP i 55 230.034 136.760 242.609 1.00120.62 ATOM 142 CA TRP i 55 230.723 137.268 243.790 1.00120.62 ATOM 143 C TRP i 55 231.936 136.418 244.118 1.00120.62 ATOM 144 O TRP i 55 232.988 136.950 244.489 1.00120.62 ATOM 145 CB TRP i 55 229.799 137.325 245.004 1.00120.62 ATOM 146 CG TRP i 55 228.817 138.442 244.985 1.00120.62 ATOM 147 CD1 TRP i 55 227.467 138.355 244.814 1.00120.62 ATOM 148 CD2 TRP i 55 229.111 139.833 245.134 1.00120.62 ATOM 149 NE1 TRP i 55 226.902 139.601 244.854 1.00120.62 ATOM 150 CE2 TRP i 55 227.890 140.530 245.048 1.00120.62 ATOM 151 CE3 TRP i 55 230.288 140.556 245.335 1.00120.62 ATOM 152 CZ2 TRP i 55 227.815 141.909 245.154 1.00120.62 ATOM 153 CZ3 TRP i 55 230.209 141.925 245.439 1.00120.62 ATOM 154 CH2 TRP i 55 228.981 142.591 245.349 1.00120.62 ATOM 155 N ILE i 56 231.806 135.096 243.994 1.00117.57 ATOM 156 CA ILE i 56 232.942 134.222 244.249 1.00117.57 ATOM 157 C ILE i 56 233.982 134.373 243.155 1.00117.57 ATOM 158 O ILE i 56 235.186 134.368 243.430 1.00117.57 ATOM 159 CB ILE i 56 232.485 132.758 244.387 1.00117.57 ATOM 160 N TYR i 57 233.545 134.546 241.907 1.00118.29 ATOM 161 CA TYR i 57 234.503 134.706 240.823 1.00118.29 ATOM 162 C TYR i 57 235.144 136.088 240.847 1.00118.29 ATOM 163 O TYR i 57 236.208 136.286 240.249 1.00118.29 ATOM 164 CB TYR i 57 233.820 134.445 239.483 1.00118.29 ATOM 165 CG TYR i 57 234.782 134.357 238.331 1.00118.29 ATOM 166 CD1 TYR i 57 235.558 133.223 238.145 1.00118.29 ATOM 167 CD2 TYR i 57 234.932 135.412 237.445 1.00118.29 ATOM 168 CE1 TYR i 57 236.446 133.134 237.101 1.00118.29 ATOM 169 CE2 TYR i 57 235.821 135.335 236.398 1.00118.29 ATOM 170 CZ TYR i 57 236.575 134.193 236.230 1.00118.29 ATOM 171 OH TYR i 57 237.464 134.109 235.186 1.00118.29 ATOM 172 N LEU i 58 234.522 137.045 241.540 1.00119.59 ATOM 173 CA LEU i 58 235.098 138.381 241.648 1.00119.59 ATOM 174 C LEU i 58 236.383 138.367 242.460 1.00119.59 ATOM 175 O LEU i 58 237.455 138.710 241.951 1.00119.59 ATOM 176 CB LEU i 58 234.098 139.338 242.289 1.00119.59 ATOM 177 CG LEU i 58 234.609 140.765 242.440 1.00119.59 ATOM 178 CD1 LEU i 58 234.860 141.375 241.078 1.00119.59 ATOM 179 CD2 LEU i 58 233.620 141.588 243.234 1.00119.59 ATOM 180 N ILE i 59 236.293 137.956 243.723 1.00112.83 ATOM 181 CA ILE i 59 237.430 138.090 244.620 1.00112.83 ATOM 182 C ILE i 59 238.476 137.028 244.307 1.00112.83 ATOM 183 O ILE i 59 239.678 137.247 244.499 1.00112.83 ATOM 184 CB ILE i 59 236.943 138.040 246.078 1.00112.83 ATOM 185 CG1 ILE i 59 235.855 139.089 246.278 1.00112.83 ATOM 186 CG2 ILE i 59 238.058 138.370 247.049 1.00112.83 ATOM 187 CD1 ILE i 59 235.134 138.975 247.590 1.00112.83 ATOM 188 N LYS i 60 238.044 135.887 243.757 1.00109.86 ATOM 189 CA LYS i 60 239.002 134.883 243.305 1.00109.86 ATOM 190 C LYS i 60 239.805 135.378 242.112 1.00109.86 ATOM 191 O LYS i 60 240.944 134.943 241.909 1.00109.86 ATOM 192 CB LYS i 60 238.291 133.579 242.955 1.00109.86 ATOM 193 N GLN i 61 239.236 136.280 241.318 1.00118.47 ATOM 194 CA GLN i 61 240.056 137.013 240.366 1.00118.47 ATOM 195 C GLN i 61 240.817 138.135 241.056 1.00118.47 ATOM 196 O GLN i 61 241.956 138.435 240.681 1.00118.47 ATOM 197 CB GLN i 61 239.187 137.571 239.241 1.00118.47 ATOM 198 N HIS i 62 240.217 138.744 242.080 1.00120.86 ATOM 199 CA HIS i 62 240.801 139.930 242.694 1.00120.86 ATOM 200 C HIS i 62 241.940 139.588 243.638 1.00120.86 ATOM 201 O HIS i 62 243.036 140.144 243.511 1.00120.86 ATOM 202 CB HIS i 62 239.733 140.714 243.441 1.00120.86 ATOM 203 CG HIS i 62 240.270 141.892 244.182 1.00120.86 ATOM 204 ND1 HIS i 62 240.677 143.044 243.548 1.00120.86 ATOM 205 CD2 HIS i 62 240.478 142.093 245.503 1.00120.86 ATOM 206 CE1 HIS i 62 241.107 143.909 244.449 1.00120.86 ATOM 207 NE2 HIS i 62 240.997 143.357 245.643 1.00120.86 ATOM 208 N ASN i 63 241.697 138.689 244.597 1.00124.91 ATOM 209 CA ASN i 63 242.734 138.300 245.547 1.00124.91 ATOM 210 C ASN i 63 243.872 137.542 244.882 1.00124.91 ATOM 211 O ASN i 63 244.979 137.504 245.430 1.00124.91 ATOM 212 CB ASN i 63 242.137 137.451 246.670 1.00124.91 ATOM 213 N GLU i 64 243.621 136.929 243.725 1.00117.87 ATOM 214 CA GLU i 64 244.718 136.471 242.885 1.00117.87 ATOM 215 C GLU i 64 245.526 137.654 242.374 1.00117.87 ATOM 216 O GLU i 64 246.726 137.761 242.648 1.00117.87 ATOM 217 CB GLU i 64 244.178 135.646 241.717 1.00117.87 ATOM 218 N ASP i 65 244.864 138.578 241.672 1.00119.70 ATOM 219 CA ASP i 65 245.543 139.697 241.030 1.00119.70 ATOM 220 C ASP i 65 246.123 140.690 242.026 1.00119.70 ATOM 221 O ASP i 65 247.073 141.401 241.681 1.00119.70 ATOM 222 CB ASP i 65 244.582 140.419 240.087 1.00119.70 ATOM 223 N VAL i 66 245.569 140.764 243.239 1.00116.90 ATOM 224 CA VAL i 66 246.194 141.564 244.286 1.00116.90 ATOM 225 C VAL i 66 247.544 140.977 244.657 1.00116.90 ATOM 226 O VAL i 66 248.517 141.712 244.862 1.00116.90 ATOM 227 CB VAL i 66 245.270 141.664 245.511 1.00116.90 ATOM 228 N LEU i 67 247.636 139.653 244.719 1.00121.54 ATOM 229 CA LEU i 67 248.908 138.989 244.944 1.00121.54 ATOM 230 C LEU i 67 249.791 138.980 243.707 1.00121.54 ATOM 231 O LEU i 67 251.012 138.839 243.838 1.00121.54 ATOM 232 CB LEU i 67 248.677 137.549 245.410 1.00121.54 ATOM 233 N GLU i 68 249.207 139.135 242.515 1.00127.86 ATOM 234 CA GLU i 68 249.998 139.110 241.292 1.00127.86 ATOM 235 C GLU i 68 250.834 140.365 241.106 1.00127.86 ATOM 236 O GLU i 68 251.889 140.296 240.468 1.00127.86 ATOM 237 CB GLU i 68 249.098 138.922 240.071 1.00127.86 ATOM 238 CG GLU i 68 248.476 137.546 239.951 1.00127.86 ATOM 239 CD GLU i 68 249.494 136.462 239.675 1.00127.86 ATOM 240 OE1 GLU i 68 250.497 136.743 238.986 1.00127.86 ATOM 241 OE2 GLU i 68 249.290 135.326 240.149 1.00127.86 ATOM 242 N TYR i 69 250.389 141.506 241.631 1.00132.41 ATOM 243 CA TYR i 69 251.187 142.722 241.520 1.00132.41 ATOM 244 C TYR i 69 252.422 142.647 242.406 1.00132.41 ATOM 245 O TYR i 69 253.492 143.150 242.049 1.00132.41 ATOM 246 CB TYR i 69 250.343 143.946 241.867 1.00132.41 ATOM 247 CG TYR i 69 251.145 145.225 241.921 1.00132.41 ATOM 248 CD1 TYR i 69 251.717 145.758 240.774 1.00132.41 ATOM 249 CD2 TYR i 69 251.328 145.905 243.119 1.00132.41 ATOM 250 CE1 TYR i 69 252.440 146.933 240.813 1.00132.41 ATOM 251 CE2 TYR i 69 252.056 147.080 243.170 1.00132.41 ATOM 252 CZ TYR i 69 252.609 147.589 242.013 1.00132.41 ATOM 253 OH TYR i 69 253.338 148.755 242.051 1.00132.41 ATOM 254 N LYS i 70 252.293 142.015 243.570 1.00125.42 ATOM 255 CA LYS i 70 253.456 141.867 244.432 1.00125.42 ATOM 256 C LYS i 70 254.384 140.771 243.926 1.00125.42 ATOM 257 O LYS i 70 255.610 140.918 243.995 1.00125.42 ATOM 258 CB LYS i 70 253.016 141.589 245.867 1.00125.42 ATOM 259 CG LYS i 70 254.174 141.505 246.844 1.00125.42 ATOM 260 CD LYS i 70 254.902 142.842 246.911 1.00125.42 ATOM 261 CE LYS i 70 256.040 142.826 247.918 1.00125.42 ATOM 262 NZ LYS i 70 256.815 144.099 247.888 1.00125.42 ATOM 263 N ARG i 71 253.823 139.685 243.391 1.00124.65 ATOM 264 CA ARG i 71 254.648 138.583 242.909 1.00124.65 ATOM 265 C ARG i 71 255.407 138.955 241.641 1.00124.65 ATOM 266 O ARG i 71 256.475 138.394 241.374 1.00124.65 ATOM 267 CB ARG i 71 253.781 137.349 242.666 1.00124.65 ATOM 268 N ARG i 72 254.884 139.895 240.858 1.00126.05 ATOM 269 CA ARG i 72 255.580 140.391 239.679 1.00126.05 ATOM 270 C ARG i 72 256.402 141.638 239.976 1.00126.05 ATOM 271 O ARG i 72 257.622 141.634 239.793 1.00126.05 ATOM 272 CB ARG i 72 254.576 140.680 238.557 1.00126.05 ATOM 273 N ASN i 73 255.761 142.703 240.442 1.00116.72 ATOM 274 CA ASN i 73 256.475 143.931 240.758 1.00116.72 ATOM 275 C ASN i 73 256.927 143.921 242.211 1.00116.72 ATOM 276 O ASN i 73 257.359 142.891 242.725 1.00116.72 ATOM 277 CB ASN i 73 255.599 145.152 240.483 1.00116.72 TER