HEADER OXIDOREDUCTASE 31-DEC-69 7DKF TITLE Activity optimized supercomplex state4 COMPND MOL_ID: 50; COMPND 2 MOLECULE: NADH dehydrogenase [ubiquinone] 1 subunit C1, COMPND 3 CHAIN: i2; EXPDTA ELECTRON MICROSCOPY DBREF 7DKF i 28 76 UNP Q02376 NDUC1_BOVIN 28 76 SEQRES 1 i2 38 HIS GLY SER PRO ASN TRP LEU LYS VAL GLY LEU THR LEU SEQRES 2 i2 38 GLY THR SER VAL PHE LEU TRP ILE TYR LEU ILE LYS GLN SEQRES 3 i2 38 HIS ASN GLU ASP VAL LEU GLU TYR LYS ARG ARG ASN ATOM 1 N HIS i 36 200.278 129.762 249.573 1.00209.39 ATOM 2 CA HIS i 36 201.498 128.966 249.525 1.00209.39 ATOM 3 C HIS i 36 202.645 129.729 248.870 1.00209.39 ATOM 4 O HIS i 36 202.680 130.960 248.877 1.00209.39 ATOM 5 CB HIS i 36 201.256 127.656 248.768 1.00209.39 ATOM 6 CG HIS i 36 200.336 126.708 249.472 1.00209.39 ATOM 7 ND1 HIS i 36 200.735 125.946 250.549 1.00209.39 ATOM 8 CD2 HIS i 36 199.037 126.397 249.252 1.00209.39 ATOM 9 CE1 HIS i 36 199.721 125.206 250.963 1.00209.39 ATOM 10 NE2 HIS i 36 198.679 125.461 250.192 1.00209.39 ATOM 11 N GLY i 37 203.587 128.976 248.323 1.00186.86 ATOM 12 CA GLY i 37 204.678 129.537 247.541 1.00186.86 ATOM 13 C GLY i 37 204.857 128.742 246.264 1.00186.86 ATOM 14 O GLY i 37 205.034 127.523 246.304 1.00186.86 ATOM 15 N SER i 38 204.810 129.437 245.130 1.00170.71 ATOM 16 CA SER i 38 204.904 128.807 243.814 1.00170.71 ATOM 17 C SER i 38 206.035 129.415 242.995 1.00170.71 ATOM 18 O SER i 38 205.794 130.257 242.118 1.00170.71 ATOM 19 CB SER i 38 203.580 128.933 243.061 1.00170.71 ATOM 20 OG SER i 38 203.685 128.405 241.751 1.00170.71 ATOM 21 N PRO i 39 207.293 129.007 243.244 1.00163.83 ATOM 22 CA PRO i 39 208.352 129.335 242.284 1.00163.83 ATOM 23 C PRO i 39 208.426 128.280 241.193 1.00163.83 ATOM 24 O PRO i 39 207.602 127.361 241.164 1.00163.83 ATOM 25 CB PRO i 39 209.617 129.347 243.148 1.00163.83 ATOM 26 CG PRO i 39 209.336 128.344 244.188 1.00163.83 ATOM 27 CD PRO i 39 207.858 128.418 244.474 1.00163.83 ATOM 28 N ASN i 40 209.395 128.401 240.287 1.00154.77 ATOM 29 CA ASN i 40 209.598 127.367 239.280 1.00154.77 ATOM 30 C ASN i 40 210.560 126.286 239.748 1.00154.77 ATOM 31 O ASN i 40 210.710 125.273 239.055 1.00154.77 ATOM 32 CB ASN i 40 210.108 127.988 237.981 1.00154.77 ATOM 33 N TRP i 41 211.241 126.513 240.878 1.00156.69 ATOM 34 CA TRP i 41 212.095 125.552 241.585 1.00156.69 ATOM 35 C TRP i 41 213.307 125.092 240.772 1.00156.69 ATOM 36 O TRP i 41 213.961 124.111 241.141 1.00156.69 ATOM 37 CB TRP i 41 211.298 124.329 242.063 1.00156.69 ATOM 38 CG TRP i 41 210.339 124.617 243.175 1.00156.69 ATOM 39 CD1 TRP i 41 209.005 124.875 243.061 1.00156.69 ATOM 40 CD2 TRP i 41 210.638 124.661 244.574 1.00156.69 ATOM 41 NE1 TRP i 41 208.455 125.079 244.302 1.00156.69 ATOM 42 CE2 TRP i 41 209.437 124.955 245.248 1.00156.69 ATOM 43 CE3 TRP i 41 211.805 124.482 245.321 1.00156.69 ATOM 44 CZ2 TRP i 41 209.369 125.076 246.634 1.00156.69 ATOM 45 CZ3 TRP i 41 211.736 124.601 246.697 1.00156.69 ATOM 46 CH2 TRP i 41 210.525 124.895 247.339 1.00156.69 ATOM 47 N LEU i 42 213.636 125.776 239.677 1.00128.82 ATOM 48 CA LEU i 42 214.806 125.444 238.879 1.00128.82 ATOM 49 C LEU i 42 215.833 126.568 238.893 1.00128.82 ATOM 50 O LEU i 42 216.975 126.364 239.312 1.00128.82 ATOM 51 CB LEU i 42 214.371 125.116 237.439 1.00128.82 ATOM 52 CG LEU i 42 215.353 124.539 236.406 1.00128.82 ATOM 53 CD1 LEU i 42 214.609 123.596 235.477 1.00128.82 ATOM 54 CD2 LEU i 42 216.035 125.618 235.573 1.00128.82 ATOM 55 N LYS i 43 215.442 127.761 238.464 1.00118.64 ATOM 56 CA LYS i 43 216.361 128.880 238.348 1.00118.64 ATOM 57 C LYS i 43 216.603 129.592 239.669 1.00118.64 ATOM 58 O LYS i 43 217.662 130.206 239.837 1.00118.64 ATOM 59 CB LYS i 43 215.835 129.870 237.301 1.00118.64 ATOM 60 CG LYS i 43 214.461 130.440 237.612 1.00118.64 ATOM 61 CD LYS i 43 213.963 131.330 236.491 1.00118.64 ATOM 62 CE LYS i 43 212.600 131.914 236.825 1.00118.64 ATOM 63 NZ LYS i 43 211.542 130.869 236.874 1.00118.64 ATOM 64 N VAL i 44 215.660 129.522 240.605 1.00115.64 ATOM 65 CA VAL i 44 215.840 130.138 241.912 1.00115.64 ATOM 66 C VAL i 44 216.810 129.267 242.693 1.00115.64 ATOM 67 O VAL i 44 216.490 128.132 243.060 1.00115.64 ATOM 68 CB VAL i 44 214.504 130.302 242.653 1.00115.64 ATOM 69 CG1 VAL i 44 214.736 130.910 244.023 1.00115.64 ATOM 70 CG2 VAL i 44 213.553 131.158 241.838 1.00115.64 ATOM 71 N GLY i 45 218.010 129.793 242.940 1.00118.33 ATOM 72 CA GLY i 45 219.119 129.029 243.479 1.00118.33 ATOM 73 C GLY i 45 220.280 128.916 242.513 1.00118.33 ATOM 74 O GLY i 45 221.438 128.878 242.941 1.00118.33 ATOM 75 N LEU i 46 219.988 128.858 241.211 1.00113.49 ATOM 76 CA LEU i 46 221.045 128.968 240.216 1.00113.49 ATOM 77 C LEU i 46 221.630 130.369 240.203 1.00113.49 ATOM 78 O LEU i 46 222.838 130.542 240.017 1.00113.49 ATOM 79 CB LEU i 46 220.513 128.608 238.833 1.00113.49 ATOM 80 CG LEU i 46 220.147 127.148 238.609 1.00113.49 ATOM 81 CD1 LEU i 46 219.506 126.978 237.244 1.00113.49 ATOM 82 CD2 LEU i 46 221.383 126.274 238.741 1.00113.49 ATOM 83 N THR i 47 220.784 131.381 240.392 1.00114.21 ATOM 84 CA THR i 47 221.265 132.754 240.468 1.00114.21 ATOM 85 C THR i 47 222.073 132.984 241.733 1.00114.21 ATOM 86 O THR i 47 223.093 133.680 241.703 1.00114.21 ATOM 87 CB THR i 47 220.089 133.720 240.441 1.00114.21 ATOM 88 OG1 THR i 47 219.345 133.577 241.654 1.00114.21 ATOM 89 CG2 THR i 47 219.176 133.406 239.270 1.00114.21 ATOM 90 N LEU i 48 221.640 132.399 242.842 1.00117.28 ATOM 91 CA LEU i 48 222.316 132.582 244.113 1.00117.28 ATOM 92 C LEU i 48 223.609 131.787 244.207 1.00117.28 ATOM 93 O LEU i 48 224.509 132.181 244.955 1.00117.28 ATOM 94 CB LEU i 48 221.374 132.183 245.249 1.00117.28 ATOM 95 CG LEU i 48 220.057 132.964 245.281 1.00117.28 ATOM 96 CD1 LEU i 48 219.132 132.434 246.369 1.00117.28 ATOM 97 CD2 LEU i 48 220.299 134.456 245.449 1.00117.28 ATOM 98 N GLY i 49 223.730 130.697 243.458 1.00117.29 ATOM 99 CA GLY i 49 224.922 129.880 243.509 1.00117.29 ATOM 100 C GLY i 49 225.974 130.319 242.517 1.00117.29 ATOM 101 O GLY i 49 227.173 130.157 242.761 1.00117.29 ATOM 102 N THR i 50 225.533 130.873 241.386 1.00113.95 ATOM 103 CA THR i 50 226.464 131.417 240.406 1.00113.95 ATOM 104 C THR i 50 227.167 132.646 240.961 1.00113.95 ATOM 105 O THR i 50 228.347 132.871 240.674 1.00113.95 ATOM 106 CB THR i 50 225.718 131.768 239.117 1.00113.95 ATOM 107 OG1 THR i 50 224.950 130.636 238.695 1.00113.95 ATOM 108 CG2 THR i 50 226.682 132.133 237.999 1.00113.95 ATOM 109 N SER i 51 226.454 133.429 241.776 1.00114.41 ATOM 110 CA SER i 51 227.020 134.643 242.352 1.00114.41 ATOM 111 C SER i 51 228.163 134.317 243.297 1.00114.41 ATOM 112 O SER i 51 229.258 134.878 243.178 1.00114.41 ATOM 113 CB SER i 51 225.937 135.438 243.081 1.00114.41 ATOM 114 OG SER i 51 224.963 135.925 242.179 1.00114.41 ATOM 115 N VAL i 52 227.927 133.384 244.224 1.00119.07 ATOM 116 CA VAL i 52 228.949 132.948 245.172 1.00119.07 ATOM 117 C VAL i 52 230.108 132.285 244.442 1.00119.07 ATOM 118 O VAL i 52 231.271 132.426 244.846 1.00119.07 ATOM 119 CB VAL i 52 228.298 132.015 246.213 1.00119.07 ATOM 120 CG1 VAL i 52 229.312 131.493 247.226 1.00119.07 ATOM 121 CG2 VAL i 52 227.167 132.740 246.918 1.00119.07 ATOM 122 N PHE i 53 229.815 131.591 243.338 1.00117.66 ATOM 123 CA PHE i 53 230.863 131.120 242.437 1.00117.66 ATOM 124 C PHE i 53 231.664 132.280 241.863 1.00117.66 ATOM 125 O PHE i 53 232.895 132.214 241.787 1.00117.66 ATOM 126 CB PHE i 53 230.248 130.290 241.314 1.00117.66 ATOM 127 CG PHE i 53 231.229 129.880 240.264 1.00117.66 ATOM 128 CD1 PHE i 53 232.167 128.898 240.529 1.00117.66 ATOM 129 CD2 PHE i 53 231.214 130.473 239.013 1.00117.66 ATOM 130 CE1 PHE i 53 233.075 128.518 239.568 1.00117.66 ATOM 131 CE2 PHE i 53 232.121 130.098 238.048 1.00117.66 ATOM 132 CZ PHE i 53 233.052 129.118 238.325 1.00117.66 ATOM 133 N LEU i 54 230.983 133.356 241.468 1.00116.96 ATOM 134 CA LEU i 54 231.695 134.541 241.009 1.00116.96 ATOM 135 C LEU i 54 232.283 135.309 242.183 1.00116.96 ATOM 136 O LEU i 54 233.264 136.041 242.022 1.00116.96 ATOM 137 CB LEU i 54 230.767 135.424 240.181 1.00116.96 ATOM 138 CG LEU i 54 230.320 134.777 238.869 1.00116.96 ATOM 139 CD1 LEU i 54 229.346 135.674 238.134 1.00116.96 ATOM 140 CD2 LEU i 54 231.510 134.426 237.995 1.00116.96 ATOM 141 N TRP i 55 231.693 135.166 243.375 1.00120.62 ATOM 142 CA TRP i 55 232.375 135.648 244.571 1.00120.62 ATOM 143 C TRP i 55 233.624 134.833 244.849 1.00120.62 ATOM 144 O TRP i 55 234.658 135.389 245.233 1.00120.62 ATOM 145 CB TRP i 55 231.463 135.616 245.795 1.00120.62 ATOM 146 CG TRP i 55 230.439 136.693 245.835 1.00120.62 ATOM 147 CD1 TRP i 55 229.091 136.561 245.674 1.00120.62 ATOM 148 CD2 TRP i 55 230.681 138.087 246.043 1.00120.62 ATOM 149 NE1 TRP i 55 228.479 137.781 245.775 1.00120.62 ATOM 150 CE2 TRP i 55 229.433 138.739 246.000 1.00120.62 ATOM 151 CE3 TRP i 55 231.831 138.846 246.265 1.00120.62 ATOM 152 CZ2 TRP i 55 229.306 140.108 246.168 1.00120.62 ATOM 153 CZ3 TRP i 55 231.700 140.204 246.430 1.00120.62 ATOM 154 CH2 TRP i 55 230.447 140.825 246.382 1.00120.62 ATOM 155 N ILE i 56 233.543 133.513 244.667 1.00117.57 ATOM 156 CA ILE i 56 234.715 132.674 244.872 1.00117.57 ATOM 157 C ILE i 56 235.736 132.914 243.776 1.00117.57 ATOM 158 O ILE i 56 236.942 132.944 244.039 1.00117.57 ATOM 159 CB ILE i 56 234.317 131.189 244.949 1.00117.57 ATOM 160 N TYR i 57 235.278 133.124 242.541 1.00118.29 ATOM 161 CA TYR i 57 236.217 133.369 241.456 1.00118.29 ATOM 162 C TYR i 57 236.804 134.773 241.535 1.00118.29 ATOM 163 O TYR i 57 237.853 135.039 240.936 1.00118.29 ATOM 164 CB TYR i 57 235.529 133.141 240.112 1.00118.29 ATOM 165 CG TYR i 57 236.480 133.142 238.948 1.00118.29 ATOM 166 CD1 TYR i 57 237.297 132.048 238.704 1.00118.29 ATOM 167 CD2 TYR i 57 236.579 134.240 238.109 1.00118.29 ATOM 168 CE1 TYR i 57 238.176 132.040 237.649 1.00118.29 ATOM 169 CE2 TYR i 57 237.459 134.244 237.051 1.00118.29 ATOM 170 CZ TYR i 57 238.254 133.141 236.825 1.00118.29 ATOM 171 OH TYR i 57 239.134 133.138 235.769 1.00118.29 ATOM 172 N LEU i 58 236.154 135.673 242.276 1.00119.59 ATOM 173 CA LEU i 58 236.679 137.025 242.438 1.00119.59 ATOM 174 C LEU i 58 237.973 137.025 243.236 1.00119.59 ATOM 175 O LEU i 58 239.025 137.432 242.732 1.00119.59 ATOM 176 CB LEU i 58 235.650 137.913 243.130 1.00119.59 ATOM 177 CG LEU i 58 236.107 139.351 243.340 1.00119.59 ATOM 178 CD1 LEU i 58 236.319 140.029 242.004 1.00119.59 ATOM 179 CD2 LEU i 58 235.096 140.099 244.179 1.00119.59 ATOM 180 N ILE i 59 237.913 136.556 244.480 1.00112.83 ATOM 181 CA ILE i 59 239.054 136.694 245.371 1.00112.83 ATOM 182 C ILE i 59 240.137 135.689 245.001 1.00112.83 ATOM 183 O ILE i 59 241.332 135.946 245.191 1.00112.83 ATOM 184 CB ILE i 59 238.586 136.561 246.830 1.00112.83 ATOM 185 CG1 ILE i 59 237.461 137.557 247.087 1.00112.83 ATOM 186 CG2 ILE i 59 239.699 136.891 247.804 1.00112.83 ATOM 187 CD1 ILE i 59 236.760 137.357 248.400 1.00112.83 ATOM 188 N LYS i 60 239.743 134.557 244.405 1.00109.86 ATOM 189 CA LYS i 60 240.734 133.612 243.899 1.00109.86 ATOM 190 C LYS i 60 241.503 134.191 242.722 1.00109.86 ATOM 191 O LYS i 60 242.656 133.810 242.489 1.00109.86 ATOM 192 CB LYS i 60 240.070 132.298 243.499 1.00109.86 ATOM 193 N GLN i 61 240.891 135.104 241.974 1.00118.47 ATOM 194 CA GLN i 61 241.671 135.910 241.048 1.00118.47 ATOM 195 C GLN i 61 242.396 137.029 241.780 1.00118.47 ATOM 196 O GLN i 61 243.518 137.389 241.407 1.00118.47 ATOM 197 CB GLN i 61 240.768 136.482 239.957 1.00118.47 ATOM 198 N HIS i 62 241.785 137.568 242.836 1.00120.86 ATOM 199 CA HIS i 62 242.329 138.748 243.496 1.00120.86 ATOM 200 C HIS i 62 243.492 138.409 244.413 1.00120.86 ATOM 201 O HIS i 62 244.564 139.013 244.300 1.00120.86 ATOM 202 CB HIS i 62 241.241 139.456 244.288 1.00120.86 ATOM 203 CG HIS i 62 241.740 140.620 245.075 1.00120.86 ATOM 204 ND1 HIS i 62 242.095 141.814 244.489 1.00120.86 ATOM 205 CD2 HIS i 62 241.955 140.771 246.402 1.00120.86 ATOM 206 CE1 HIS i 62 242.502 142.655 245.423 1.00120.86 ATOM 207 NE2 HIS i 62 242.427 142.047 246.593 1.00120.86 ATOM 208 N ASN i 63 243.294 137.460 245.333 1.00124.91 ATOM 209 CA ASN i 63 244.357 137.071 246.255 1.00124.91 ATOM 210 C ASN i 63 245.515 136.388 245.546 1.00124.91 ATOM 211 O ASN i 63 246.629 136.369 246.080 1.00124.91 ATOM 212 CB ASN i 63 243.806 136.150 247.345 1.00124.91 ATOM 213 N GLU i 64 245.275 135.817 244.365 1.00117.87 ATOM 214 CA GLU i 64 246.379 135.440 243.495 1.00117.87 ATOM 215 C GLU i 64 247.135 136.675 243.029 1.00117.87 ATOM 216 O GLU i 64 248.333 136.816 243.296 1.00117.87 ATOM 217 CB GLU i 64 245.858 134.646 242.296 1.00117.87 ATOM 218 N ASP i 65 246.430 137.602 242.375 1.00119.70 ATOM 219 CA ASP i 65 247.057 138.774 241.777 1.00119.70 ATOM 220 C ASP i 65 247.610 139.744 242.811 1.00119.70 ATOM 221 O ASP i 65 248.528 140.506 242.488 1.00119.70 ATOM 222 CB ASP i 65 246.059 139.499 240.877 1.00119.70 ATOM 223 N VAL i 66 247.068 139.743 244.031 1.00116.90 ATOM 224 CA VAL i 66 247.673 140.520 245.106 1.00116.90 ATOM 225 C VAL i 66 249.049 139.970 245.438 1.00116.90 ATOM 226 O VAL i 66 249.995 140.733 245.666 1.00116.90 ATOM 227 CB VAL i 66 246.760 140.529 246.344 1.00116.90 ATOM 228 N LEU i 67 249.193 138.649 245.440 1.00121.54 ATOM 229 CA LEU i 67 250.492 138.026 245.623 1.00121.54 ATOM 230 C LEU i 67 251.360 138.106 244.378 1.00121.54 ATOM 231 O LEU i 67 252.587 138.007 244.491 1.00121.54 ATOM 232 CB LEU i 67 250.322 136.559 246.026 1.00121.54 ATOM 233 N GLU i 68 250.757 138.291 243.200 1.00127.86 ATOM 234 CA GLU i 68 251.535 138.351 241.969 1.00127.86 ATOM 235 C GLU i 68 252.319 139.644 241.831 1.00127.86 ATOM 236 O GLU i 68 253.369 139.645 241.180 1.00127.86 ATOM 237 CB GLU i 68 250.628 138.182 240.750 1.00127.86 ATOM 238 CG GLU i 68 250.059 136.789 240.575 1.00127.86 ATOM 239 CD GLU i 68 251.115 135.759 240.241 1.00127.86 ATOM 240 OE1 GLU i 68 252.098 136.109 239.555 1.00127.86 ATOM 241 OE2 GLU i 68 250.960 134.596 240.666 1.00127.86 ATOM 242 N TYR i 69 251.837 140.743 242.411 1.00132.41 ATOM 243 CA TYR i 69 252.586 141.993 242.346 1.00132.41 ATOM 244 C TYR i 69 253.833 141.927 243.216 1.00132.41 ATOM 245 O TYR i 69 254.878 142.487 242.871 1.00132.41 ATOM 246 CB TYR i 69 251.699 143.166 242.756 1.00132.41 ATOM 247 CG TYR i 69 252.452 144.472 242.859 1.00132.41 ATOM 248 CD1 TYR i 69 252.989 145.077 241.731 1.00132.41 ATOM 249 CD2 TYR i 69 252.622 145.105 244.084 1.00132.41 ATOM 250 CE1 TYR i 69 253.667 146.277 241.815 1.00132.41 ATOM 251 CE2 TYR i 69 253.305 146.304 244.180 1.00132.41 ATOM 252 CZ TYR i 69 253.824 146.885 243.041 1.00132.41 ATOM 253 OH TYR i 69 254.508 148.076 243.124 1.00132.41 ATOM 254 N LYS i 70 253.742 141.240 244.352 1.00125.42 ATOM 255 CA LYS i 70 254.919 141.100 245.195 1.00125.42 ATOM 256 C LYS i 70 255.883 140.064 244.632 1.00125.42 ATOM 257 O LYS i 70 257.103 140.256 244.695 1.00125.42 ATOM 258 CB LYS i 70 254.507 140.742 246.620 1.00125.42 ATOM 259 CG LYS i 70 255.678 140.660 247.581 1.00125.42 ATOM 260 CD LYS i 70 256.355 142.020 247.701 1.00125.42 ATOM 261 CE LYS i 70 257.504 142.004 248.695 1.00125.42 ATOM 262 NZ LYS i 70 258.229 143.307 248.714 1.00125.42 ATOM 263 N ARG i 71 255.358 138.982 244.054 1.00124.65 ATOM 264 CA ARG i 71 256.220 137.935 243.516 1.00124.65 ATOM 265 C ARG i 71 256.949 138.392 242.258 1.00124.65 ATOM 266 O ARG i 71 258.035 137.885 241.956 1.00124.65 ATOM 267 CB ARG i 71 255.398 136.680 243.227 1.00124.65 ATOM 268 N ARG i 72 256.381 139.344 241.523 1.00126.05 ATOM 269 CA ARG i 72 257.044 139.919 240.361 1.00126.05 ATOM 270 C ARG i 72 257.821 141.183 240.705 1.00126.05 ATOM 271 O ARG i 72 259.038 141.234 240.510 1.00126.05 ATOM 272 CB ARG i 72 256.017 140.217 239.262 1.00126.05 ATOM 273 N ASN i 73 257.144 142.200 241.224 1.00116.72 ATOM 274 CA ASN i 73 257.814 143.440 241.587 1.00116.72 ATOM 275 C ASN i 73 258.283 143.384 243.034 1.00116.72 ATOM 276 O ASN i 73 258.760 142.350 243.497 1.00116.72 ATOM 277 CB ASN i 73 256.888 144.637 241.375 1.00116.72 TER