HEADER LIGASE 31-DEC-69 7NUA TITLE Crystal Structure of Neisseria gonorrhoeae LeuRS L550G mutant COMPND MOL_ID: 1; COMPND 2 MOLECULE: Leucine--tRNA ligase; COMPND 3 CHAIN: A; COMPND 4 MUTATION: YES; COMPND 5 EC: 6.1.1.4; COMPND 6 FRAGMENT: Leucyl-tRNA ; COMPND 7 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.09 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 592 REMARK 465 ASN A 593 REMARK 465 ASP A 594 REMARK 465 LYS A 595 REMARK 465 GLY A 596 REMARK 465 GLY A 597 REMARK 465 LYS A 598 REMARK 465 ASP A 599 REMARK 465 PHE A 610 REMARK 465 ASP A 611 REMARK 465 ASP A 612 REMARK 465 LYS A 613 REMARK 465 GLY A 614 REMARK 465 ARG A 615 REMARK 465 PRO A 616 REMARK 465 VAL A 617 REMARK 465 SER A 618 DBREF 7NUA A 1 876 UNP B4RNT1 SYL_NEIG2 1 876 SEQRES 1 A 50 VAL CYS GLU THR TYR TYR ARG GLU ASN ASP LYS GLY GLY SEQRES 2 A 50 LYS ASP TRP ILE ASN PRO ALA ASP VAL GLU LEU THR PHE SEQRES 3 A 50 ASP ASP LYS GLY ARG PRO VAL SER ALA VAL LEU LYS ALA SEQRES 4 A 50 ASP GLY LEU PRO VAL VAL ILE SER GLY THR GLU ATOM 1 N VAL A 584 -16.912 -7.858 -24.158 1.00 44.51 ATOM 2 CA VAL A 584 -17.329 -7.887 -22.763 1.00 43.19 ATOM 3 C VAL A 584 -17.807 -9.290 -22.407 1.00 51.87 ATOM 4 O VAL A 584 -18.083 -10.125 -23.274 1.00 63.65 ATOM 5 CB VAL A 584 -18.424 -6.839 -22.473 1.00 40.08 ATOM 6 CG1 VAL A 584 -18.044 -5.496 -23.082 1.00 31.55 ATOM 7 CG2 VAL A 584 -19.768 -7.309 -23.004 1.00 32.35 ATOM 8 N CYS A 585 -17.901 -9.548 -21.103 1.00 49.96 ATOM 9 CA CYS A 585 -18.310 -10.860 -20.619 1.00 54.24 ATOM 10 C CYS A 585 -18.860 -10.736 -19.207 1.00 59.49 ATOM 11 O CYS A 585 -18.557 -9.786 -18.480 1.00 52.42 ATOM 12 CB CYS A 585 -17.148 -11.858 -20.647 1.00 48.01 ATOM 13 SG CYS A 585 -17.565 -13.495 -20.011 1.00 47.96 ATOM 14 N GLU A 586 -19.663 -11.727 -18.828 1.00 65.12 ATOM 15 CA GLU A 586 -20.255 -11.779 -17.501 1.00 64.49 ATOM 16 C GLU A 586 -19.199 -12.155 -16.461 1.00 72.21 ATOM 17 O GLU A 586 -18.175 -12.772 -16.769 1.00 78.50 ATOM 18 CB GLU A 586 -21.411 -12.782 -17.483 1.00 61.83 ATOM 19 CG GLU A 586 -22.281 -12.750 -16.237 1.00 67.75 ATOM 20 CD GLU A 586 -23.488 -13.660 -16.353 1.00 80.74 ATOM 21 OE1 GLU A 586 -24.562 -13.297 -15.828 1.00 84.95 ATOM 22 OE2 GLU A 586 -23.364 -14.738 -16.969 1.00 82.21 ATOM 23 N THR A 587 -19.459 -11.769 -15.214 1.00 70.48 ATOM 24 CA THR A 587 -18.534 -11.984 -14.112 1.00 72.03 ATOM 25 C THR A 587 -19.191 -12.840 -13.037 1.00 71.15 ATOM 26 O THR A 587 -20.398 -12.743 -12.795 1.00 69.02 ATOM 27 CB THR A 587 -18.075 -10.650 -13.516 1.00 67.75 ATOM 28 OG1 THR A 587 -19.213 -9.920 -13.046 1.00 69.97 ATOM 29 CG2 THR A 587 -17.368 -9.824 -14.576 1.00 51.65 ATOM 30 N TYR A 588 -18.382 -13.680 -12.388 1.00 77.38 ATOM 31 CA TYR A 588 -18.866 -14.644 -11.411 1.00 83.31 ATOM 32 C TYR A 588 -18.002 -14.585 -10.160 1.00 89.80 ATOM 33 O TYR A 588 -16.795 -14.345 -10.235 1.00 85.01 ATOM 34 CB TYR A 588 -18.847 -16.067 -11.981 1.00 81.16 ATOM 35 CG TYR A 588 -19.439 -16.166 -13.366 1.00 81.73 ATOM 36 CD1 TYR A 588 -20.813 -16.213 -13.553 1.00 77.58 ATOM 37 CD2 TYR A 588 -18.623 -16.200 -14.488 1.00 81.65 ATOM 38 CE1 TYR A 588 -21.358 -16.298 -14.818 1.00 69.42 ATOM 39 CE2 TYR A 588 -19.158 -16.285 -15.757 1.00 75.19 ATOM 40 CZ TYR A 588 -20.526 -16.334 -15.917 1.00 71.02 ATOM 41 OH TYR A 588 -21.062 -16.419 -17.181 1.00 77.88 ATOM 42 N TYR A 589 -18.626 -14.827 -9.009 1.00100.30 ATOM 43 CA TYR A 589 -17.932 -14.747 -7.732 1.00 98.28 ATOM 44 C TYR A 589 -18.523 -15.768 -6.770 1.00 92.51 ATOM 45 O TYR A 589 -19.568 -16.370 -7.030 1.00 84.36 ATOM 46 CB TYR A 589 -18.022 -13.339 -7.132 1.00 93.22 ATOM 47 CG TYR A 589 -19.432 -12.919 -6.783 1.00 95.24 ATOM 48 CD1 TYR A 589 -20.301 -12.457 -7.763 1.00105.68 ATOM 49 CD2 TYR A 589 -19.897 -12.989 -5.476 1.00 86.79 ATOM 50 CE1 TYR A 589 -21.591 -12.075 -7.453 1.00110.42 ATOM 51 CE2 TYR A 589 -21.187 -12.608 -5.155 1.00 91.95 ATOM 52 CZ TYR A 589 -22.029 -12.152 -6.148 1.00104.93 ATOM 53 OH TYR A 589 -23.314 -11.771 -5.837 1.00109.77 ATOM 54 N ARG A 590 -17.841 -15.949 -5.643 1.00 84.70 ATOM 55 CA ARG A 590 -18.302 -16.857 -4.599 1.00 70.42 ATOM 56 C ARG A 590 -17.730 -16.460 -3.241 1.00 60.06 ATOM 57 O ARG A 590 -18.473 -16.132 -2.314 1.00 43.76 ATOM 58 CB ARG A 590 -17.918 -18.301 -4.930 1.00 61.96 ATOM 59 N TRP A 599 -13.369 -13.808 -7.644 1.00 81.90 ATOM 60 CA TRP A 599 -14.015 -13.814 -8.951 1.00 78.55 ATOM 61 C TRP A 599 -13.652 -15.073 -9.739 1.00 75.08 ATOM 62 O TRP A 599 -12.476 -15.392 -9.908 1.00 67.80 ATOM 63 CB TRP A 599 -13.630 -12.562 -9.742 1.00 79.72 ATOM 64 CG TRP A 599 -14.196 -11.285 -9.188 1.00 85.59 ATOM 65 CD1 TRP A 599 -13.531 -10.343 -8.459 1.00 93.27 ATOM 66 CD2 TRP A 599 -15.539 -10.803 -9.334 1.00 87.52 ATOM 67 NE1 TRP A 599 -14.377 -9.310 -8.134 1.00 94.98 ATOM 68 CE2 TRP A 599 -15.615 -9.568 -8.660 1.00 85.88 ATOM 69 CE3 TRP A 599 -16.684 -11.298 -9.965 1.00 94.97 ATOM 70 CZ2 TRP A 599 -16.791 -8.822 -8.599 1.00 79.92 ATOM 71 CZ3 TRP A 599 -17.851 -10.556 -9.903 1.00 88.63 ATOM 72 CH2 TRP A 599 -17.895 -9.332 -9.225 1.00 79.71 ATOM 73 N ILE A 600 -14.671 -15.784 -10.222 1.00 78.16 ATOM 74 CA ILE A 600 -14.492 -17.045 -10.935 1.00 73.30 ATOM 75 C ILE A 600 -14.530 -16.783 -12.433 1.00 74.68 ATOM 76 O ILE A 600 -15.364 -16.010 -12.921 1.00 83.02 ATOM 77 CB ILE A 600 -15.566 -18.070 -10.528 1.00 65.62 ATOM 78 N ASN A 601 -13.629 -17.438 -13.168 1.00 63.68 ATOM 79 CA ASN A 601 -13.533 -17.248 -14.608 1.00 61.96 ATOM 80 C ASN A 601 -14.639 -18.028 -15.320 1.00 77.96 ATOM 81 O ASN A 601 -15.001 -19.127 -14.891 1.00 97.83 ATOM 82 CB ASN A 601 -12.161 -17.695 -15.117 1.00 66.87 ATOM 83 CG ASN A 601 -11.866 -17.200 -16.520 1.00 69.99 ATOM 84 OD1 ASN A 601 -11.991 -17.943 -17.493 1.00 70.99 ATOM 85 ND2 ASN A 601 -11.479 -15.933 -16.632 1.00 70.51 ATOM 86 N PRO A 602 -15.198 -17.478 -16.404 1.00 75.96 ATOM 87 CA PRO A 602 -16.287 -18.178 -17.106 1.00 74.26 ATOM 88 C PRO A 602 -15.876 -19.499 -17.732 1.00 80.41 ATOM 89 O PRO A 602 -16.756 -20.312 -18.041 1.00 85.27 ATOM 90 CB PRO A 602 -16.717 -17.171 -18.183 1.00 70.07 ATOM 91 CG PRO A 602 -16.242 -15.849 -17.683 1.00 59.66 ATOM 92 CD PRO A 602 -14.977 -16.124 -16.938 1.00 73.70 ATOM 93 N ALA A 603 -14.579 -19.741 -17.935 1.00 82.52 ATOM 94 CA ALA A 603 -14.150 -20.985 -18.568 1.00 88.89 ATOM 95 C ALA A 603 -14.479 -22.189 -17.694 1.00 93.97 ATOM 96 O ALA A 603 -15.046 -23.179 -18.171 1.00 99.22 ATOM 97 CB ALA A 603 -12.653 -20.930 -18.875 1.00 95.75 ATOM 98 N ASP A 604 -14.136 -22.122 -16.413 1.00 92.87 ATOM 99 CA ASP A 604 -14.438 -23.200 -15.472 1.00 97.20 ATOM 100 C ASP A 604 -15.701 -22.879 -14.674 1.00 87.21 ATOM 101 O ASP A 604 -15.702 -22.806 -13.446 1.00 85.93 ATOM 102 CB ASP A 604 -13.242 -23.451 -14.556 1.00103.31 ATOM 103 CG ASP A 604 -12.601 -22.167 -14.063 1.00 96.24 ATOM 104 OD1 ASP A 604 -13.301 -21.349 -13.432 1.00 97.86 ATOM 105 OD2 ASP A 604 -11.392 -21.977 -14.311 1.00 84.34 ATOM 106 N VAL A 605 -16.799 -22.697 -15.405 1.00 77.41 ATOM 107 CA VAL A 605 -18.095 -22.402 -14.803 1.00 71.04 ATOM 108 C VAL A 605 -19.189 -22.875 -15.749 1.00 77.68 ATOM 109 O VAL A 605 -19.060 -22.770 -16.972 1.00 79.36 ATOM 110 CB VAL A 605 -18.244 -20.898 -14.487 1.00 52.13 ATOM 111 N GLU A 606 -20.270 -23.400 -15.175 1.00 81.90 ATOM 112 CA GLU A 606 -21.429 -23.856 -15.928 1.00 84.21 ATOM 113 C GLU A 606 -22.677 -23.171 -15.388 1.00 97.23 ATOM 114 O GLU A 606 -22.659 -22.546 -14.324 1.00105.94 ATOM 115 CB GLU A 606 -21.578 -25.383 -15.861 1.00 70.73 ATOM 116 N LEU A 607 -23.772 -23.295 -16.131 1.00 93.85 ATOM 117 CA LEU A 607 -25.018 -22.616 -15.810 1.00 89.63 ATOM 118 C LEU A 607 -26.106 -23.619 -15.447 1.00 86.03 ATOM 119 O LEU A 607 -26.082 -24.775 -15.880 1.00 78.58 ATOM 120 CB LEU A 607 -25.486 -21.750 -16.984 1.00 80.94 ATOM 121 N THR A 608 -27.061 -23.159 -14.644 1.00 79.37 ATOM 122 CA THR A 608 -28.188 -23.986 -14.227 1.00 67.49 ATOM 123 C THR A 608 -29.128 -24.257 -15.397 1.00 63.32 ATOM 124 O THR A 608 -29.623 -23.328 -16.036 1.00 57.28 ATOM 125 CB THR A 608 -28.982 -23.324 -13.084 1.00 57.34 ATOM 126 N ALA A 618 -26.451 -21.550 -11.808 1.00 82.44 ATOM 127 CA ALA A 618 -25.028 -21.334 -12.037 1.00 83.83 ATOM 128 C ALA A 618 -24.199 -22.099 -11.014 1.00 94.90 ATOM 129 O ALA A 618 -24.318 -21.870 -9.811 1.00 87.48 ATOM 130 CB ALA A 618 -24.701 -19.851 -11.987 1.00 71.17 ATOM 131 N VAL A 619 -23.358 -23.011 -11.496 1.00101.07 ATOM 132 CA VAL A 619 -22.537 -23.845 -10.630 1.00 97.60 ATOM 133 C VAL A 619 -21.126 -23.915 -11.194 1.00 96.74 ATOM 134 O VAL A 619 -20.908 -23.762 -12.400 1.00 88.04 ATOM 135 CB VAL A 619 -23.126 -25.264 -10.470 1.00 94.86 ATOM 136 N LEU A 620 -20.164 -24.139 -10.302 1.00101.35 ATOM 137 CA LEU A 620 -18.781 -24.322 -10.715 1.00 97.20 ATOM 138 C LEU A 620 -18.666 -25.520 -11.650 1.00105.26 ATOM 139 O LEU A 620 -19.387 -26.512 -11.515 1.00109.71 ATOM 140 CB LEU A 620 -17.886 -24.524 -9.489 1.00 87.72 ATOM 141 CG LEU A 620 -16.408 -24.136 -9.583 1.00 79.99 ATOM 142 CD1 LEU A 620 -16.239 -22.800 -10.287 1.00 80.17 ATOM 143 CD2 LEU A 620 -15.775 -24.102 -8.199 1.00 76.29 ATOM 144 N LYS A 621 -17.752 -25.419 -12.617 1.00104.43 ATOM 145 CA LYS A 621 -17.558 -26.525 -13.549 1.00 96.53 ATOM 146 C LYS A 621 -16.939 -27.733 -12.856 1.00100.89 ATOM 147 O LYS A 621 -17.260 -28.878 -13.191 1.00106.55 ATOM 148 CB LYS A 621 -16.686 -26.083 -14.723 1.00 76.57 ATOM 149 N ALA A 622 -16.050 -27.503 -11.891 1.00 96.08 ATOM 150 CA ALA A 622 -15.325 -28.605 -11.271 1.00 79.98 ATOM 151 C ALA A 622 -16.071 -29.176 -10.072 1.00 89.32 ATOM 152 O ALA A 622 -16.260 -30.393 -9.973 1.00 88.71 ATOM 153 CB ALA A 622 -13.926 -28.145 -10.849 1.00 44.35 ATOM 154 N ASP A 623 -16.500 -28.309 -9.161 1.00 91.42 ATOM 155 CA ASP A 623 -17.060 -28.722 -7.885 1.00 85.02 ATOM 156 C ASP A 623 -18.580 -28.747 -7.883 1.00 97.53 ATOM 157 O ASP A 623 -19.171 -29.272 -6.932 1.00105.74 ATOM 158 CB ASP A 623 -16.550 -27.794 -6.771 1.00 61.27 ATOM 159 N GLY A 624 -19.226 -28.183 -8.907 1.00108.31 ATOM 160 CA GLY A 624 -20.675 -28.104 -8.925 1.00100.76 ATOM 161 C GLY A 624 -21.144 -27.184 -7.821 1.00104.19 ATOM 162 O GLY A 624 -22.289 -27.245 -7.360 1.00 84.28 ATOM 163 N LEU A 625 -20.238 -26.312 -7.404 1.00126.85 ATOM 164 CA LEU A 625 -20.502 -25.408 -6.295 1.00132.04 ATOM 165 C LEU A 625 -21.194 -24.154 -6.814 1.00133.09 ATOM 166 O LEU A 625 -20.628 -23.454 -7.662 1.00137.87 ATOM 167 CB LEU A 625 -19.208 -25.044 -5.580 1.00128.22 ATOM 168 N PRO A 626 -22.405 -23.846 -6.351 1.00115.65 ATOM 169 CA PRO A 626 -23.130 -22.670 -6.858 1.00107.79 ATOM 170 C PRO A 626 -22.357 -21.381 -6.627 1.00107.51 ATOM 171 O PRO A 626 -22.005 -21.039 -5.496 1.00106.30 ATOM 172 CB PRO A 626 -24.435 -22.696 -6.056 1.00103.80 ATOM 173 CG PRO A 626 -24.638 -24.146 -5.744 1.00105.34 ATOM 174 CD PRO A 626 -23.261 -24.719 -5.531 1.00111.41 ATOM 175 N VAL A 627 -22.092 -20.666 -7.718 1.00106.52 ATOM 176 CA VAL A 627 -21.472 -19.349 -7.674 1.00105.88 ATOM 177 C VAL A 627 -22.434 -18.354 -8.307 1.00117.13 ATOM 178 O VAL A 627 -23.150 -18.678 -9.260 1.00118.76 ATOM 179 CB VAL A 627 -20.104 -19.323 -8.392 1.00 90.13 ATOM 180 N VAL A 628 -22.453 -17.140 -7.769 1.00117.80 ATOM 181 CA VAL A 628 -23.397 -16.123 -8.218 1.00113.57 ATOM 182 C VAL A 628 -22.846 -15.420 -9.451 1.00115.77 ATOM 183 O VAL A 628 -21.630 -15.304 -9.643 1.00123.82 ATOM 184 CB VAL A 628 -23.698 -15.121 -7.085 1.00101.19 ATOM 185 N ILE A 629 -23.755 -14.945 -10.300 1.00100.35 ATOM 186 CA ILE A 629 -23.403 -14.238 -11.526 1.00 73.16 ATOM 187 C ILE A 629 -23.620 -12.748 -11.307 1.00 70.31 ATOM 188 O ILE A 629 -24.694 -12.328 -10.856 1.00 69.69 ATOM 189 CB ILE A 629 -24.229 -14.745 -12.719 1.00 50.93 ATOM 190 N SER A 630 -22.607 -11.952 -11.626 1.00 64.13 ATOM 191 CA SER A 630 -22.663 -10.504 -11.499 1.00 68.75 ATOM 192 C SER A 630 -22.790 -9.865 -12.880 1.00 71.26 ATOM 193 O SER A 630 -22.859 -10.549 -13.907 1.00 61.19 ATOM 194 CB SER A 630 -21.431 -9.982 -10.757 1.00 69.29 ATOM 195 OG SER A 630 -21.563 -8.605 -10.449 1.00 82.61 ATOM 196 N GLY A 631 -22.823 -8.533 -12.897 1.00 70.51 ATOM 197 CA GLY A 631 -22.931 -7.815 -14.151 1.00 66.83 ATOM 198 C GLY A 631 -21.727 -8.031 -15.047 1.00 69.49 ATOM 199 O GLY A 631 -20.677 -8.515 -14.628 1.00 80.12 ATOM 200 N THR A 632 -21.890 -7.656 -16.311 1.00 63.90 ATOM 201 CA THR A 632 -20.856 -7.867 -17.313 1.00 64.08 ATOM 202 C THR A 632 -19.957 -6.642 -17.417 1.00 72.37 ATOM 203 O THR A 632 -20.440 -5.505 -17.465 1.00 67.33 ATOM 204 CB THR A 632 -21.473 -8.181 -18.675 1.00 68.89 ATOM 205 OG1 THR A 632 -21.864 -6.962 -19.321 1.00 90.68 ATOM 206 CG2 THR A 632 -22.689 -9.072 -18.515 1.00 61.91 ATOM 207 N GLU A 633 -18.651 -6.881 -17.443 1.00 85.24 ATOM 208 CA GLU A 633 -17.640 -5.857 -17.651 1.00 75.83 ATOM 209 C GLU A 633 -16.895 -6.152 -18.946 1.00 60.18 ATOM 210 O GLU A 633 -17.066 -7.208 -19.560 1.00 52.85 ATOM 211 CB GLU A 633 -16.652 -5.809 -16.477 1.00 85.36 ATOM 212 CG GLU A 633 -17.292 -5.956 -15.108 1.00 87.70 ATOM 213 CD GLU A 633 -17.981 -4.689 -14.653 1.00 94.77 ATOM 214 OE1 GLU A 633 -17.540 -3.596 -15.065 1.00100.98 ATOM 215 OE2 GLU A 633 -18.963 -4.786 -13.888 1.00 93.14 TER