HEADER TRANSCRIPTION 31-DEC-69 7NVY TITLE RNA polymerase II pre-initiation complex with closed promoter DNA in TITLE 2 proximal position COMPND MOL_ID: 5; COMPND 2 MOLECULE: General transcription factor IIH subunit 3; COMPND 3 CHAIN: 4; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 7NVY 4 1 308 UNP Q13889 TF2H3_HUMAN 1 308 SEQRES 1 4 28 GLY TYR VAL CYS SER VAL CYS LEU SER ILE PHE CYS ASN SEQRES 2 4 28 PHE SER PRO ILE CYS THR THR CYS GLU THR ALA PHE LYS SEQRES 3 4 28 ILE SER ATOM 1 N GLY 4 265 340.824 259.584 245.024 1.00 51.66 ATOM 2 CA GLY 4 265 341.082 260.009 243.656 1.00 51.66 ATOM 3 C GLY 4 265 340.023 260.984 243.180 1.00 51.66 ATOM 4 O GLY 4 265 338.847 260.849 243.523 1.00 51.66 ATOM 5 N TYR 4 266 340.450 261.963 242.388 1.00 51.13 ATOM 6 CA TYR 4 266 339.568 262.986 241.829 1.00 51.13 ATOM 7 C TYR 4 266 339.496 262.757 240.321 1.00 51.13 ATOM 8 O TYR 4 266 340.276 263.324 239.553 1.00 51.13 ATOM 9 CB TYR 4 266 340.072 264.394 242.154 1.00 51.13 ATOM 10 CG TYR 4 266 340.239 264.686 243.632 1.00 51.13 ATOM 11 CD1 TYR 4 266 339.651 263.881 244.599 1.00 51.13 ATOM 12 CD2 TYR 4 266 340.989 265.774 244.058 1.00 51.13 ATOM 13 CE1 TYR 4 266 339.807 264.151 245.945 1.00 51.13 ATOM 14 CE2 TYR 4 266 341.149 266.052 245.402 1.00 51.13 ATOM 15 CZ TYR 4 266 340.555 265.238 246.341 1.00 51.13 ATOM 16 OH TYR 4 266 340.711 265.510 247.681 1.00 51.13 ATOM 17 N VAL 4 267 338.552 261.920 239.902 1.00 43.53 ATOM 18 CA VAL 4 267 338.367 261.618 238.491 1.00 43.53 ATOM 19 C VAL 4 267 337.318 262.562 237.916 1.00 43.53 ATOM 20 O VAL 4 267 336.452 263.078 238.626 1.00 43.53 ATOM 21 CB VAL 4 267 337.959 260.145 238.277 1.00 43.53 ATOM 22 CG1 VAL 4 267 338.920 259.208 238.998 1.00 43.53 ATOM 23 CG2 VAL 4 267 336.530 259.909 238.739 1.00 43.53 ATOM 24 N CYS 4 268 337.399 262.794 236.608 1.00 35.98 ATOM 25 CA CYS 4 268 336.405 263.578 235.896 1.00 35.98 ATOM 26 C CYS 4 268 335.451 262.639 235.160 1.00 35.98 ATOM 27 O CYS 4 268 335.561 261.413 235.234 1.00 35.98 ATOM 28 CB CYS 4 268 337.076 264.558 234.930 1.00 35.98 ATOM 29 SG CYS 4 268 337.701 263.812 233.408 1.00 35.98 ATOM 30 N SER 4 269 334.502 263.227 234.437 1.00 27.92 ATOM 31 CA SER 4 269 333.481 262.464 233.731 1.00 27.92 ATOM 32 C SER 4 269 333.877 262.116 232.302 1.00 27.92 ATOM 33 O SER 4 269 333.074 261.511 231.584 1.00 27.92 ATOM 34 CB SER 4 269 332.162 263.243 233.717 1.00 27.92 ATOM 35 OG SER 4 269 331.093 262.424 233.276 1.00 27.92 ATOM 36 N VAL 4 270 335.086 262.478 231.874 1.00 33.89 ATOM 37 CA VAL 4 270 335.544 262.202 230.517 1.00 33.89 ATOM 38 C VAL 4 270 336.792 261.335 230.583 1.00 33.89 ATOM 39 O VAL 4 270 336.817 260.218 230.054 1.00 33.89 ATOM 40 CB VAL 4 270 335.827 263.503 229.745 1.00 33.89 ATOM 41 CG1 VAL 4 270 336.091 263.202 228.275 1.00 33.89 ATOM 42 CG2 VAL 4 270 334.675 264.476 229.905 1.00 33.89 ATOM 43 N CYS 4 271 337.842 261.851 231.227 1.00 40.06 ATOM 44 CA CYS 4 271 339.084 261.094 231.324 1.00 40.06 ATOM 45 C CYS 4 271 338.890 259.818 232.132 1.00 40.06 ATOM 46 O CYS 4 271 339.416 258.760 231.768 1.00 40.06 ATOM 47 CB CYS 4 271 340.180 261.953 231.954 1.00 40.06 ATOM 48 SG CYS 4 271 340.668 263.389 230.992 1.00 40.06 ATOM 49 N LEU 4 272 338.133 259.895 233.227 1.00 35.07 ATOM 50 CA LEU 4 272 338.036 258.788 234.175 1.00 35.07 ATOM 51 C LEU 4 272 339.438 258.435 234.670 1.00 35.07 ATOM 52 O LEU 4 272 339.862 257.279 234.667 1.00 35.07 ATOM 53 CB LEU 4 272 337.328 257.585 233.534 1.00 35.07 ATOM 54 CG LEU 4 272 336.927 256.347 234.356 1.00 35.07 ATOM 55 CD1 LEU 4 272 335.729 255.665 233.697 1.00 35.07 ATOM 56 CD2 LEU 4 272 338.041 255.327 234.518 1.00 35.07 ATOM 57 N SER 4 273 340.182 259.465 235.060 1.00 39.04 ATOM 58 CA SER 4 273 341.588 259.346 235.418 1.00 39.04 ATOM 59 C SER 4 273 341.770 259.699 236.886 1.00 39.04 ATOM 60 O SER 4 273 341.220 260.697 237.362 1.00 39.04 ATOM 61 CB SER 4 273 342.449 260.268 234.555 1.00 39.04 ATOM 62 OG SER 4 273 342.355 259.917 233.188 1.00 39.04 ATOM 63 N ILE 4 274 342.539 258.879 237.595 1.00 52.17 ATOM 64 CA ILE 4 274 342.824 259.113 239.006 1.00 52.17 ATOM 65 C ILE 4 274 343.918 260.171 239.102 1.00 52.17 ATOM 66 O ILE 4 274 345.001 260.009 238.532 1.00 52.17 ATOM 67 CB ILE 4 274 343.249 257.813 239.703 1.00 52.17 ATOM 68 CG1 ILE 4 274 342.185 256.727 239.510 1.00 52.17 ATOM 69 CG2 ILE 4 274 343.475 258.060 241.180 1.00 52.17 ATOM 70 CD1 ILE 4 274 342.711 255.309 239.718 1.00 52.17 ATOM 71 N PHE 4 275 343.643 261.248 239.834 1.00 47.53 ATOM 72 CA PHE 4 275 344.518 262.411 239.869 1.00 47.53 ATOM 73 C PHE 4 275 345.033 262.686 241.276 1.00 47.53 ATOM 74 O PHE 4 275 344.665 262.026 242.252 1.00 47.53 ATOM 75 CB PHE 4 275 343.805 263.650 239.310 1.00 47.53 ATOM 76 CG PHE 4 275 343.848 263.730 237.814 1.00 47.53 ATOM 77 CD1 PHE 4 275 345.031 264.060 237.179 1.00 47.53 ATOM 78 CD2 PHE 4 275 342.724 263.484 237.043 1.00 47.53 ATOM 79 CE1 PHE 4 275 345.103 264.135 235.807 1.00 47.53 ATOM 80 CE2 PHE 4 275 342.790 263.564 235.662 1.00 47.53 ATOM 81 CZ PHE 4 275 343.984 263.888 235.045 1.00 47.53 ATOM 82 N CYS 4 276 345.920 263.681 241.345 1.00 45.11 ATOM 83 CA CYS 4 276 346.600 264.037 242.585 1.00 45.11 ATOM 84 C CYS 4 276 345.686 264.811 243.523 1.00 45.11 ATOM 85 O CYS 4 276 345.312 264.320 244.593 1.00 45.11 ATOM 86 CB CYS 4 276 347.840 264.872 242.264 1.00 45.11 ATOM 87 SG CYS 4 276 348.753 265.460 243.705 1.00 45.11 ATOM 88 N ASN 4 277 345.310 266.020 243.126 1.00 35.60 ATOM 89 CA ASN 4 277 344.526 266.897 243.972 1.00 35.60 ATOM 90 C ASN 4 277 343.599 267.714 243.092 1.00 35.60 ATOM 91 O ASN 4 277 343.741 267.753 241.868 1.00 35.60 ATOM 92 CB ASN 4 277 345.417 267.822 244.806 1.00 35.60 ATOM 93 CG ASN 4 277 344.750 268.272 246.087 1.00 35.60 ATOM 94 OD1 ASN 4 277 343.534 268.165 246.242 1.00 35.60 ATOM 95 ND2 ASN 4 277 345.551 268.759 247.025 1.00 35.60 ATOM 96 N PHE 4 278 342.640 268.366 243.735 1.00 39.72 ATOM 97 CA PHE 4 278 341.699 269.190 243.001 1.00 39.72 ATOM 98 C PHE 4 278 342.447 270.243 242.195 1.00 39.72 ATOM 99 O PHE 4 278 343.329 270.933 242.716 1.00 39.72 ATOM 100 CB PHE 4 278 340.722 269.848 243.968 1.00 39.72 ATOM 101 CG PHE 4 278 339.838 270.856 243.322 1.00 39.72 ATOM 102 CD1 PHE 4 278 338.766 270.453 242.549 1.00 39.72 ATOM 103 CD2 PHE 4 278 340.078 272.207 243.481 1.00 39.72 ATOM 104 CE1 PHE 4 278 337.948 271.378 241.945 1.00 39.72 ATOM 105 CE2 PHE 4 278 339.263 273.140 242.881 1.00 39.72 ATOM 106 CZ PHE 4 278 338.195 272.725 242.111 1.00 39.72 ATOM 107 N SER 4 279 342.100 270.355 240.917 1.00 40.81 ATOM 108 CA SER 4 279 342.730 271.292 240.003 1.00 40.81 ATOM 109 C SER 4 279 341.649 271.993 239.197 1.00 40.81 ATOM 110 O SER 4 279 340.556 271.443 239.014 1.00 40.81 ATOM 111 CB SER 4 279 343.710 270.583 239.052 1.00 40.81 ATOM 112 OG SER 4 279 343.953 271.357 237.890 1.00 40.81 ATOM 113 N PRO 4 280 341.918 273.208 238.709 1.00 41.97 ATOM 114 CA PRO 4 280 340.900 273.892 237.893 1.00 41.97 ATOM 115 C PRO 4 280 340.469 273.084 236.683 1.00 41.97 ATOM 116 O PRO 4 280 339.280 273.075 236.340 1.00 41.97 ATOM 117 CB PRO 4 280 341.596 275.201 237.491 1.00 41.97 ATOM 118 CG PRO 4 280 342.661 275.405 238.513 1.00 41.97 ATOM 119 CD PRO 4 280 343.117 274.039 238.914 1.00 41.97 ATOM 120 N ILE 4 281 341.402 272.398 236.029 1.00 37.32 ATOM 121 CA ILE 4 281 341.095 271.548 234.883 1.00 37.32 ATOM 122 C ILE 4 281 342.160 270.465 234.798 1.00 37.32 ATOM 123 O ILE 4 281 343.358 270.755 234.870 1.00 37.32 ATOM 124 CB ILE 4 281 341.031 272.352 233.567 1.00 37.32 ATOM 125 CG1 ILE 4 281 342.259 273.257 233.428 1.00 37.32 ATOM 126 CG2 ILE 4 281 339.759 273.182 233.507 1.00 37.32 ATOM 127 CD1 ILE 4 281 342.393 273.893 232.060 1.00 37.32 ATOM 128 N CYS 4 282 341.729 269.215 234.651 1.00 46.31 ATOM 129 CA CYS 4 282 342.679 268.126 234.482 1.00 46.31 ATOM 130 C CYS 4 282 343.329 268.209 233.106 1.00 46.31 ATOM 131 O CYS 4 282 342.663 268.466 232.099 1.00 46.31 ATOM 132 CB CYS 4 282 341.992 266.772 234.674 1.00 46.31 ATOM 133 SG CYS 4 282 340.427 266.559 233.798 1.00 46.31 ATOM 134 N THR 4 283 344.645 267.990 233.070 1.00 41.10 ATOM 135 CA THR 4 283 345.401 268.205 231.840 1.00 41.10 ATOM 136 C THR 4 283 344.933 267.276 230.727 1.00 41.10 ATOM 137 O THR 4 283 344.826 267.690 229.567 1.00 41.10 ATOM 138 CB THR 4 283 346.895 268.008 232.102 1.00 41.10 ATOM 139 OG1 THR 4 283 347.135 266.666 232.543 1.00 41.10 ATOM 140 CG2 THR 4 283 347.386 268.985 233.161 1.00 41.10 ATOM 141 N THR 4 284 344.648 266.017 231.058 1.00 42.13 ATOM 142 CA THR 4 284 344.263 265.036 230.050 1.00 42.13 ATOM 143 C THR 4 284 342.866 265.271 229.490 1.00 42.13 ATOM 144 O THR 4 284 342.454 264.531 228.589 1.00 42.13 ATOM 145 CB THR 4 284 344.345 263.625 230.638 1.00 42.13 ATOM 146 OG1 THR 4 284 343.465 263.520 231.765 1.00 42.13 ATOM 147 CG2 THR 4 284 345.767 263.309 231.076 1.00 42.13 ATOM 148 N CYS 4 285 342.132 266.265 229.988 1.00 38.14 ATOM 149 CA CYS 4 285 340.764 266.524 229.558 1.00 38.14 ATOM 150 C CYS 4 285 340.630 267.826 228.787 1.00 38.14 ATOM 151 O CYS 4 285 340.005 267.847 227.720 1.00 38.14 ATOM 152 CB CYS 4 285 339.836 266.553 230.781 1.00 38.14 ATOM 153 SG CYS 4 285 338.091 266.286 230.436 1.00 38.14 ATOM 154 N GLU 4 286 341.198 268.916 229.300 1.00 35.36 ATOM 155 CA GLU 4 286 341.052 270.243 228.708 1.00 35.36 ATOM 156 C GLU 4 286 339.607 270.729 228.753 1.00 35.36 ATOM 157 O GLU 4 286 339.233 271.645 228.013 1.00 35.36 ATOM 158 CB GLU 4 286 341.571 270.266 227.264 1.00 35.36 ATOM 159 CG GLU 4 286 342.900 269.549 227.064 1.00 35.36 ATOM 160 CD GLU 4 286 343.320 269.494 225.608 1.00 35.36 ATOM 161 OE1 GLU 4 286 342.533 269.933 224.744 1.00 35.36 ATOM 162 OE2 GLU 4 286 344.436 269.009 225.328 1.00 35.36 ATOM 163 N THR 4 287 338.787 270.129 229.612 1.00 39.55 ATOM 164 CA THR 4 287 337.390 270.524 229.721 1.00 39.55 ATOM 165 C THR 4 287 337.264 271.856 230.451 1.00 39.55 ATOM 166 O THR 4 287 338.132 272.248 231.235 1.00 39.55 ATOM 167 CB THR 4 287 336.579 269.454 230.457 1.00 39.55 ATOM 168 OG1 THR 4 287 335.224 269.896 230.605 1.00 39.55 ATOM 169 CG2 THR 4 287 337.165 269.176 231.841 1.00 39.55 ATOM 170 N ALA 4 288 336.161 272.555 230.184 1.00 46.26 ATOM 171 CA ALA 4 288 335.882 273.842 230.820 1.00 46.26 ATOM 172 C ALA 4 288 335.112 273.611 232.121 1.00 46.26 ATOM 173 O ALA 4 288 333.927 273.922 232.255 1.00 46.26 ATOM 174 CB ALA 4 288 335.117 274.750 229.867 1.00 46.26 ATOM 175 N PHE 4 289 335.822 273.045 233.096 1.00 41.32 ATOM 176 CA PHE 4 289 335.224 272.786 234.399 1.00 41.32 ATOM 177 C PHE 4 289 334.752 274.091 235.027 1.00 41.32 ATOM 178 O PHE 4 289 335.466 275.098 235.008 1.00 41.32 ATOM 179 CB PHE 4 289 336.234 272.093 235.315 1.00 41.32 ATOM 180 CG PHE 4 289 335.795 272.009 236.752 1.00 41.32 ATOM 181 CD1 PHE 4 289 334.528 271.556 237.078 1.00 41.32 ATOM 182 CD2 PHE 4 289 336.648 272.390 237.775 1.00 41.32 ATOM 183 CE1 PHE 4 289 334.122 271.480 238.398 1.00 41.32 ATOM 184 CE2 PHE 4 289 336.247 272.316 239.095 1.00 41.32 ATOM 185 CZ PHE 4 289 334.983 271.861 239.406 1.00 41.32 ATOM 186 N LYS 4 290 333.545 274.070 235.585 1.00 44.67 ATOM 187 CA LYS 4 290 332.954 275.237 236.227 1.00 44.67 ATOM 188 C LYS 4 290 333.052 275.073 237.738 1.00 44.67 ATOM 189 O LYS 4 290 332.600 274.063 238.289 1.00 44.67 ATOM 190 CB LYS 4 290 331.498 275.420 235.795 1.00 44.67 ATOM 191 CG LYS 4 290 330.607 274.212 236.055 1.00 44.67 ATOM 192 CD LYS 4 290 329.202 274.423 235.507 1.00 44.67 ATOM 193 CE LYS 4 290 329.165 274.348 233.985 1.00 44.67 ATOM 194 NZ LYS 4 290 329.711 273.064 233.464 1.00 44.67 ATOM 195 N ILE 4 291 333.646 276.065 238.405 1.00 68.06 ATOM 196 CA ILE 4 291 333.814 275.983 239.850 1.00 68.06 ATOM 197 C ILE 4 291 332.464 276.136 240.544 1.00 68.06 ATOM 198 O ILE 4 291 331.480 276.620 239.972 1.00 68.06 ATOM 199 CB ILE 4 291 334.816 277.040 240.346 1.00 68.06 ATOM 200 CG1 ILE 4 291 334.407 278.438 239.875 1.00 68.06 ATOM 201 CG2 ILE 4 291 336.217 276.709 239.857 1.00 68.06 ATOM 202 CD1 ILE 4 291 335.039 279.557 240.674 1.00 68.06 ATOM 203 N SER 4 292 332.422 275.712 241.803 1.00 66.44 ATOM 204 CA SER 4 292 331.204 275.792 242.600 1.00 66.44 ATOM 205 C SER 4 292 331.493 275.469 244.062 1.00 66.44 ATOM 206 O SER 4 292 331.249 276.287 244.949 1.00 66.44 ATOM 207 CB SER 4 292 330.139 274.839 242.053 1.00 66.44 ATOM 208 OG SER 4 292 329.688 275.257 240.776 1.00 66.44 ATOM 209 ZN ZN 4 401 339.256 265.031 232.159 1.00 90.27 ATOM 210 ZN ZN 4 402 350.566 264.417 242.202 1.00 48.60 TER