HEADER RIBOSOME 31-DEC-69 7OF7 TITLE Structure of a human mitochondrial ribosome large subunit assembly TITLE 2 intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1). COMPND MOL_ID: 48; COMPND 2 MOLECULE: 39S ribosomal protein L55, mitochondrial; COMPND 3 CHAIN: m; EXPDTA ELECTRON MICROSCOPY DBREF 7OF7 m 1 128 UNP Q7Z7F7 RM55_HUMAN 1 128 SEQRES 1 m 28 LEU TYR PRO VAL LEU LEU VAL LYS GLN ASP GLY SER THR SEQRES 2 m 28 ILE HIS ILE ARG TYR ARG GLU PRO ARG ARG MET LEU ALA SEQRES 3 m 28 MET PRO ATOM 1 N LEU m 51 149.264 284.829 192.061 1.00283.75 ATOM 2 CA LEU m 51 148.246 284.226 192.912 1.00283.75 ATOM 3 C LEU m 51 147.745 285.280 193.894 1.00283.75 ATOM 4 O LEU m 51 148.545 286.016 194.471 1.00283.75 ATOM 5 CB LEU m 51 148.813 283.016 193.657 1.00283.75 ATOM 6 CG LEU m 51 148.906 281.702 192.871 1.00283.75 ATOM 7 CD1 LEU m 51 147.536 281.213 192.426 1.00283.75 ATOM 8 CD2 LEU m 51 149.846 281.841 191.679 1.00283.75 ATOM 9 N TYR m 52 146.434 285.361 194.083 1.00290.78 ATOM 10 CA TYR m 52 145.833 286.455 194.829 1.00290.78 ATOM 11 C TYR m 52 144.691 285.940 195.690 1.00290.78 ATOM 12 O TYR m 52 144.098 284.898 195.391 1.00290.78 ATOM 13 CB TYR m 52 145.320 287.546 193.881 1.00290.78 ATOM 14 CG TYR m 52 146.341 287.967 192.849 1.00290.78 ATOM 15 CD1 TYR m 52 146.409 287.335 191.615 1.00290.78 ATOM 16 CD2 TYR m 52 147.227 289.003 193.103 1.00290.78 ATOM 17 CE1 TYR m 52 147.337 287.717 190.667 1.00290.78 ATOM 18 CE2 TYR m 52 148.158 289.392 192.163 1.00290.78 ATOM 19 CZ TYR m 52 148.209 288.746 190.947 1.00290.78 ATOM 20 OH TYR m 52 149.135 289.130 190.004 1.00290.78 ATOM 21 N PRO m 53 144.356 286.658 196.774 1.00290.75 ATOM 22 CA PRO m 53 143.296 286.198 197.685 1.00290.75 ATOM 23 C PRO m 53 141.886 286.548 197.222 1.00290.75 ATOM 24 O PRO m 53 141.349 287.592 197.605 1.00290.75 ATOM 25 CB PRO m 53 143.639 286.916 198.995 1.00290.75 ATOM 26 CG PRO m 53 144.301 288.176 198.553 1.00290.75 ATOM 27 CD PRO m 53 145.061 287.841 197.302 1.00290.75 ATOM 28 N VAL m 54 141.281 285.694 196.401 1.00295.84 ATOM 29 CA VAL m 54 139.916 285.898 195.923 1.00295.84 ATOM 30 C VAL m 54 138.952 285.158 196.842 1.00295.84 ATOM 31 O VAL m 54 139.196 284.007 197.213 1.00295.84 ATOM 32 CB VAL m 54 139.767 285.414 194.472 1.00295.84 ATOM 33 CG1 VAL m 54 138.332 285.578 193.994 1.00295.84 ATOM 34 CG2 VAL m 54 140.727 286.165 193.571 1.00295.84 ATOM 35 N LEU m 55 137.857 285.813 197.219 1.00295.00 ATOM 36 CA LEU m 55 136.836 285.157 198.024 1.00295.00 ATOM 37 C LEU m 55 135.891 284.370 197.124 1.00295.00 ATOM 38 O LEU m 55 135.510 284.832 196.047 1.00295.00 ATOM 39 CB LEU m 55 136.054 286.181 198.847 1.00295.00 ATOM 40 CG LEU m 55 136.711 286.675 200.142 1.00295.00 ATOM 41 CD1 LEU m 55 136.926 285.534 201.132 1.00295.00 ATOM 42 CD2 LEU m 55 138.026 287.386 199.849 1.00295.00 ATOM 43 N LEU m 56 135.518 283.170 197.571 1.00294.13 ATOM 44 CA LEU m 56 134.704 282.256 196.784 1.00294.13 ATOM 45 C LEU m 56 133.555 281.713 197.624 1.00294.13 ATOM 46 O LEU m 56 133.701 281.480 198.827 1.00294.13 ATOM 47 CB LEU m 56 135.553 281.091 196.246 1.00294.13 ATOM 48 CG LEU m 56 134.844 280.068 195.355 1.00294.13 ATOM 49 CD1 LEU m 56 135.783 279.588 194.264 1.00294.13 ATOM 50 CD2 LEU m 56 134.341 278.887 196.169 1.00294.13 ATOM 51 N VAL m 57 132.414 281.508 196.967 1.00294.58 ATOM 52 CA VAL m 57 131.210 280.944 197.567 1.00294.58 ATOM 53 C VAL m 57 130.679 279.884 196.612 1.00294.58 ATOM 54 O VAL m 57 130.521 280.152 195.415 1.00294.58 ATOM 55 CB VAL m 57 130.141 282.026 197.814 1.00294.58 ATOM 56 CG1 VAL m 57 128.768 281.395 197.999 1.00294.58 ATOM 57 CG2 VAL m 57 130.510 282.884 199.006 1.00294.58 ATOM 58 N LYS m 58 130.397 278.688 197.131 1.00294.02 ATOM 59 CA LYS m 58 129.971 277.602 196.247 1.00294.02 ATOM 60 C LYS m 58 128.477 277.689 195.934 1.00294.02 ATOM 61 O LYS m 58 128.088 277.902 194.782 1.00294.02 ATOM 62 CB LYS m 58 130.347 276.244 196.860 1.00294.02 ATOM 63 CG LYS m 58 129.741 275.930 198.224 1.00294.02 ATOM 64 CD LYS m 58 130.381 274.700 198.846 1.00294.02 ATOM 65 CE LYS m 58 129.721 274.335 200.170 1.00294.02 ATOM 66 NZ LYS m 58 129.966 275.357 201.229 1.00294.02 ATOM 67 N GLN m 59 127.623 277.534 196.948 1.00294.12 ATOM 68 CA GLN m 59 126.181 277.582 196.730 1.00294.12 ATOM 69 C GLN m 59 125.392 278.300 197.814 1.00294.12 ATOM 70 O GLN m 59 124.227 278.626 197.568 1.00294.12 ATOM 71 CB GLN m 59 125.619 276.160 196.586 1.00294.12 ATOM 72 CG GLN m 59 126.098 275.420 195.349 1.00294.12 ATOM 73 CD GLN m 59 125.591 276.051 194.066 1.00294.12 ATOM 74 OE1 GLN m 59 126.373 276.489 193.225 1.00294.12 ATOM 75 NE2 GLN m 59 124.272 276.106 193.915 1.00294.12 ATOM 76 N ASP m 60 125.965 278.564 198.993 1.00293.19 ATOM 77 CA ASP m 60 125.150 278.951 200.138 1.00293.19 ATOM 78 C ASP m 60 125.759 280.101 200.937 1.00293.19 ATOM 79 O ASP m 60 125.458 280.244 202.128 1.00293.19 ATOM 80 CB ASP m 60 124.926 277.734 201.046 1.00293.19 ATOM 81 CG ASP m 60 123.836 277.961 202.072 1.00293.19 ATOM 82 OD1 ASP m 60 122.652 277.734 201.747 1.00293.19 ATOM 83 OD2 ASP m 60 124.165 278.346 203.210 1.00293.19 ATOM 84 N GLY m 61 126.609 280.917 200.325 1.00293.65 ATOM 85 CA GLY m 61 127.130 282.088 201.002 1.00293.65 ATOM 86 C GLY m 61 128.152 281.752 202.067 1.00293.65 ATOM 87 O GLY m 61 127.946 282.047 203.247 1.00293.65 ATOM 88 N SER m 62 129.257 281.128 201.663 1.00293.31 ATOM 89 CA SER m 62 130.351 280.769 202.565 1.00293.31 ATOM 90 C SER m 62 131.645 281.248 201.912 1.00293.31 ATOM 91 O SER m 62 132.263 280.522 201.127 1.00293.31 ATOM 92 CB SER m 62 130.365 279.267 202.838 1.00293.31 ATOM 93 OG SER m 62 130.595 278.532 201.649 1.00293.31 ATOM 94 N THR m 63 132.053 282.472 202.239 1.00293.87 ATOM 95 CA THR m 63 133.187 283.098 201.573 1.00293.87 ATOM 96 C THR m 63 134.495 282.516 202.093 1.00293.87 ATOM 97 O THR m 63 134.746 282.507 203.303 1.00293.87 ATOM 98 CB THR m 63 133.163 284.609 201.790 1.00293.87 ATOM 99 OG1 THR m 63 133.249 284.894 203.191 1.00293.87 ATOM 100 CG2 THR m 63 131.880 285.207 201.231 1.00293.87 ATOM 101 N ILE m 64 135.329 282.038 201.173 1.00290.08 ATOM 102 CA ILE m 64 136.613 281.428 201.502 1.00290.08 ATOM 103 C ILE m 64 137.681 282.042 200.609 1.00290.08 ATOM 104 O ILE m 64 137.487 282.151 199.395 1.00290.08 ATOM 105 CB ILE m 64 136.577 279.899 201.313 1.00290.08 ATOM 106 CG1 ILE m 64 135.689 279.244 202.376 1.00290.08 ATOM 107 CG2 ILE m 64 137.988 279.327 201.334 1.00290.08 ATOM 108 CD1 ILE m 64 136.185 279.408 203.792 1.00290.08 ATOM 109 N HIS m 65 138.802 282.447 201.203 1.00291.32 ATOM 110 CA HIS m 65 139.931 282.900 200.401 1.00291.32 ATOM 111 C HIS m 65 140.504 281.753 199.581 1.00291.32 ATOM 112 O HIS m 65 140.557 280.606 200.032 1.00291.32 ATOM 113 CB HIS m 65 141.032 283.499 201.276 1.00291.32 ATOM 114 CG HIS m 65 140.737 284.881 201.768 1.00291.32 ATOM 115 ND1 HIS m 65 140.253 285.135 203.031 1.00291.32 ATOM 116 CD2 HIS m 65 140.860 286.086 201.164 1.00291.32 ATOM 117 CE1 HIS m 65 140.089 286.436 203.186 1.00291.32 ATOM 118 NE2 HIS m 65 140.451 287.037 202.066 1.00291.32 ATOM 119 N ILE m 66 140.925 282.077 198.364 1.00290.31 ATOM 120 CA ILE m 66 141.595 281.143 197.470 1.00290.31 ATOM 121 C ILE m 66 142.700 281.899 196.747 1.00290.31 ATOM 122 O ILE m 66 142.522 283.059 196.357 1.00290.31 ATOM 123 CB ILE m 66 140.610 280.501 196.468 1.00290.31 ATOM 124 CG1 ILE m 66 140.097 281.533 195.454 1.00290.31 ATOM 125 CG2 ILE m 66 139.436 279.878 197.208 1.00290.31 ATOM 126 CD1 ILE m 66 139.283 280.939 194.330 1.00290.31 ATOM 127 N ARG m 67 143.846 281.248 196.580 1.00284.25 ATOM 128 CA ARG m 67 144.932 281.800 195.777 1.00284.25 ATOM 129 C ARG m 67 144.550 281.639 194.313 1.00284.25 ATOM 130 O ARG m 67 144.752 280.579 193.717 1.00284.25 ATOM 131 CB ARG m 67 146.248 281.098 196.093 1.00284.25 ATOM 132 CG ARG m 67 146.683 281.229 197.546 1.00284.25 ATOM 133 CD ARG m 67 147.035 282.664 197.892 1.00284.25 ATOM 134 NE ARG m 67 147.530 282.793 199.257 1.00284.25 ATOM 135 CZ ARG m 67 146.762 282.993 200.320 1.00284.25 ATOM 136 NH1 ARG m 67 145.444 283.059 200.221 1.00284.25 ATOM 137 NH2 ARG m 67 147.331 283.125 201.515 1.00284.25 ATOM 138 N TYR m 68 143.977 282.690 193.732 1.00292.60 ATOM 139 CA TYR m 68 143.427 282.637 192.387 1.00292.60 ATOM 140 C TYR m 68 143.948 283.804 191.562 1.00292.60 ATOM 141 O TYR m 68 144.123 284.914 192.072 1.00292.60 ATOM 142 CB TYR m 68 141.891 282.657 192.423 1.00292.60 ATOM 143 CG TYR m 68 141.246 282.701 191.058 1.00292.60 ATOM 144 CD1 TYR m 68 141.496 281.711 190.117 1.00292.60 ATOM 145 CD2 TYR m 68 140.381 283.730 190.711 1.00292.60 ATOM 146 CE1 TYR m 68 140.909 281.749 188.868 1.00292.60 ATOM 147 CE2 TYR m 68 139.790 283.778 189.465 1.00292.60 ATOM 148 CZ TYR m 68 140.056 282.784 188.547 1.00292.60 ATOM 149 OH TYR m 68 139.468 282.823 187.305 1.00292.60 ATOM 150 N ARG m 69 144.195 283.535 190.283 1.00294.49 ATOM 151 CA ARG m 69 144.647 284.552 189.349 1.00294.49 ATOM 152 C ARG m 69 143.572 285.616 189.141 1.00294.49 ATOM 153 O ARG m 69 142.378 285.381 189.340 1.00294.49 ATOM 154 CB ARG m 69 145.004 283.905 188.010 1.00294.49 ATOM 155 CG ARG m 69 143.814 283.225 187.337 1.00294.49 ATOM 156 CD ARG m 69 144.181 282.581 186.011 1.00294.49 ATOM 157 NE ARG m 69 143.045 281.869 185.435 1.00294.49 ATOM 158 CZ ARG m 69 142.097 282.429 184.695 1.00294.49 ATOM 159 NH1 ARG m 69 142.114 283.721 184.407 1.00294.49 ATOM 160 NH2 ARG m 69 141.105 281.674 184.233 1.00294.49 ATOM 161 N GLU m 70 144.015 286.809 188.733 1.00298.70 ATOM 162 CA GLU m 70 143.086 287.849 188.308 1.00298.70 ATOM 163 C GLU m 70 142.119 288.191 189.434 1.00298.70 ATOM 164 O GLU m 70 140.954 287.776 189.391 1.00298.70 ATOM 165 CB GLU m 70 142.319 287.396 187.065 1.00298.70 ATOM 166 CG GLU m 70 143.203 287.157 185.853 1.00298.70 ATOM 167 CD GLU m 70 143.866 288.426 185.360 1.00298.70 ATOM 168 OE1 GLU m 70 143.246 289.504 185.472 1.00298.70 ATOM 169 OE2 GLU m 70 145.010 288.347 184.865 1.00298.70 ATOM 170 N PRO m 71 142.562 288.928 190.466 1.00297.55 ATOM 171 CA PRO m 71 141.730 289.088 191.669 1.00297.55 ATOM 172 C PRO m 71 140.297 289.487 191.365 1.00297.55 ATOM 173 O PRO m 71 140.028 290.638 191.011 1.00297.55 ATOM 174 CB PRO m 71 142.446 290.205 192.440 1.00297.55 ATOM 175 CG PRO m 71 143.842 290.150 191.979 1.00297.55 ATOM 176 CD PRO m 71 143.790 289.737 190.537 1.00297.55 ATOM 177 N ARG m 72 139.363 288.560 191.556 1.00299.47 ATOM 178 CA ARG m 72 137.953 288.857 191.349 1.00299.47 ATOM 179 C ARG m 72 137.294 289.403 192.604 1.00299.47 ATOM 180 O ARG m 72 136.328 290.168 192.508 1.00299.47 ATOM 181 CB ARG m 72 137.209 287.602 190.885 1.00299.47 ATOM 182 CG ARG m 72 137.759 286.995 189.604 1.00299.47 ATOM 183 CD ARG m 72 136.826 285.935 189.042 1.00299.47 ATOM 184 NE ARG m 72 135.547 286.490 188.616 1.00299.47 ATOM 185 CZ ARG m 72 134.611 285.808 187.969 1.00299.47 ATOM 186 NH1 ARG m 72 134.774 284.533 187.659 1.00299.47 ATOM 187 NH2 ARG m 72 133.481 286.422 187.625 1.00299.47 ATOM 188 N ARG m 73 137.793 289.018 193.777 1.00301.20 ATOM 189 CA ARG m 73 137.312 289.444 195.086 1.00301.20 ATOM 190 C ARG m 73 135.927 288.891 195.403 1.00301.20 ATOM 191 O ARG m 73 135.445 289.074 196.528 1.00301.20 ATOM 192 CB ARG m 73 137.280 290.973 195.214 1.00301.20 ATOM 193 CG ARG m 73 138.593 291.660 194.858 1.00301.20 ATOM 194 CD ARG m 73 139.705 291.294 195.829 1.00301.20 ATOM 195 NE ARG m 73 139.434 291.776 197.178 1.00301.20 ATOM 196 CZ ARG m 73 139.673 293.010 197.601 1.00301.20 ATOM 197 NH1 ARG m 73 140.186 293.930 196.800 1.00301.20 ATOM 198 NH2 ARG m 73 139.391 293.328 198.861 1.00301.20 ATOM 199 N MET m 74 135.272 288.220 194.455 1.00298.21 ATOM 200 CA MET m 74 133.990 287.575 194.700 1.00298.21 ATOM 201 C MET m 74 133.707 286.555 193.605 1.00298.21 ATOM 202 O MET m 74 133.639 286.904 192.422 1.00298.21 ATOM 203 CB MET m 74 132.866 288.611 194.771 1.00298.21 ATOM 204 CG MET m 74 131.525 288.044 195.216 1.00298.21 ATOM 205 SD MET m 74 131.556 287.447 196.917 1.00298.21 ATOM 206 CE MET m 74 130.211 286.266 196.888 1.00298.21 ATOM 207 N LEU m 75 133.547 285.295 193.993 1.00296.33 ATOM 208 CA LEU m 75 133.220 284.215 193.075 1.00296.33 ATOM 209 C LEU m 75 131.985 283.496 193.586 1.00296.33 ATOM 210 O LEU m 75 131.853 283.261 194.788 1.00296.33 ATOM 211 CB LEU m 75 134.381 283.223 192.942 1.00296.33 ATOM 212 CG LEU m 75 135.428 283.551 191.879 1.00296.33 ATOM 213 CD1 LEU m 75 136.710 282.782 192.138 1.00296.33 ATOM 214 CD2 LEU m 75 134.882 283.231 190.496 1.00296.33 ATOM 215 N ALA m 76 131.085 283.146 192.671 1.00295.49 ATOM 216 CA ALA m 76 129.862 282.434 193.024 1.00295.49 ATOM 217 C ALA m 76 129.614 281.353 191.986 1.00295.49 ATOM 218 O ALA m 76 129.433 281.658 190.803 1.00295.49 ATOM 219 CB ALA m 76 128.666 283.388 193.108 1.00295.49 ATOM 220 N MET m 77 129.620 280.102 192.423 1.00294.57 ATOM 221 CA MET m 77 129.277 278.997 191.539 1.00294.57 ATOM 222 C MET m 77 127.760 278.889 191.435 1.00294.57 ATOM 223 O MET m 77 127.088 278.778 192.466 1.00294.57 ATOM 224 CB MET m 77 129.865 277.691 192.060 1.00294.57 ATOM 225 CG MET m 77 129.690 276.509 191.117 1.00294.57 ATOM 226 SD MET m 77 130.667 276.650 189.609 1.00294.57 ATOM 227 CE MET m 77 129.690 275.653 188.485 1.00294.57 ATOM 228 N PRO m 78 127.178 278.929 190.226 1.00293.52 ATOM 229 CA PRO m 78 125.718 278.839 190.119 1.00293.52 ATOM 230 C PRO m 78 125.183 277.461 190.498 1.00293.52 ATOM 231 O PRO m 78 124.053 277.366 190.976 1.00293.52 ATOM 232 CB PRO m 78 125.456 279.140 188.639 1.00293.52 ATOM 233 CG PRO m 78 126.715 278.761 187.949 1.00293.52 ATOM 234 CD PRO m 78 127.817 279.091 188.909 1.00293.52 TER