HEADER HYDROLASE 31-DEC-69 7OJE TITLE Crystal structure of the covalent complex between Tribolium castaneum TITLE 2 deubiquitinase ZUP and Ubiquitin-PA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Lys-63-specific deubiquitinase ZUFSP; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.05 ANGSTORMS DBREF 7OJE A 218 592 UNP D6WWN1 D6WWN1_TRIC 218 592 SEQRES 1 A 30 PRO THR HIS SER CYS PRO VAL CYS GLY MET ASN LEU ASP SEQRES 2 A 30 ASN ALA SER ASN SER GLU SER ALA ALA ARG HIS VAL GLU SEQRES 3 A 30 SER HIS PHE PRO ATOM 1 N PRO A 223 -51.055 -4.774 -53.394 1.00127.90 ATOM 2 CA PRO A 223 -51.973 -4.002 -52.550 1.00116.27 ATOM 3 C PRO A 223 -51.431 -2.617 -52.196 1.00121.96 ATOM 4 O PRO A 223 -50.542 -2.516 -51.352 1.00125.43 ATOM 5 CB PRO A 223 -52.105 -4.873 -51.297 1.00114.91 ATOM 6 CG PRO A 223 -50.863 -5.757 -51.285 1.00116.00 ATOM 7 CD PRO A 223 -50.114 -5.561 -52.583 1.00127.41 ATOM 8 N THR A 224 -51.967 -1.569 -52.832 1.00123.59 ATOM 9 CA THR A 224 -51.448 -0.220 -52.612 1.00122.53 ATOM 10 C THR A 224 -51.652 0.237 -51.172 1.00119.44 ATOM 11 O THR A 224 -50.809 0.960 -50.630 1.00123.95 ATOM 12 CB THR A 224 -52.087 0.771 -53.591 1.00117.66 ATOM 13 OG1 THR A 224 -53.515 0.690 -53.507 1.00118.64 ATOM 14 CG2 THR A 224 -51.651 0.476 -55.025 1.00119.44 ATOM 15 N HIS A 225 -52.751 -0.167 -50.535 1.00116.87 ATOM 16 CA HIS A 225 -52.911 0.062 -49.103 1.00111.65 ATOM 17 C HIS A 225 -53.793 -1.023 -48.501 1.00 99.41 ATOM 18 O HIS A 225 -54.866 -1.332 -49.031 1.00 90.54 ATOM 19 CB HIS A 225 -53.486 1.459 -48.799 1.00122.83 ATOM 20 CG HIS A 225 -54.506 1.943 -49.786 1.00126.11 ATOM 21 ND1 HIS A 225 -55.747 1.360 -49.929 1.00114.16 ATOM 22 CD2 HIS A 225 -54.475 2.979 -50.661 1.00121.28 ATOM 23 CE1 HIS A 225 -56.430 2.002 -50.861 1.00115.25 ATOM 24 NE2 HIS A 225 -55.681 2.990 -51.320 1.00124.19 ATOM 25 N SER A 226 -53.328 -1.599 -47.397 1.00 93.45 ATOM 26 CA SER A 226 -54.055 -2.602 -46.634 1.00 81.53 ATOM 27 C SER A 226 -54.200 -2.135 -45.188 1.00 73.25 ATOM 28 O SER A 226 -53.612 -1.132 -44.774 1.00 67.82 ATOM 29 CB SER A 226 -53.345 -3.958 -46.698 1.00 79.95 ATOM 30 OG SER A 226 -52.003 -3.841 -46.264 1.00 86.47 ATOM 31 N CYS A 227 -54.996 -2.864 -44.410 1.00 72.22 ATOM 32 CA CYS A 227 -55.253 -2.457 -43.032 1.00 67.88 ATOM 33 C CYS A 227 -54.034 -2.759 -42.169 1.00 67.74 ATOM 34 O CYS A 227 -53.603 -3.917 -42.110 1.00 65.99 ATOM 35 CB CYS A 227 -56.475 -3.164 -42.463 1.00 61.90 ATOM 36 SG CYS A 227 -56.783 -2.699 -40.738 1.00 54.53 ATOM 37 N PRO A 228 -53.461 -1.767 -41.479 1.00 63.48 ATOM 38 CA PRO A 228 -52.213 -1.998 -40.738 1.00 63.94 ATOM 39 C PRO A 228 -52.379 -2.850 -39.489 1.00 69.32 ATOM 40 O PRO A 228 -51.371 -3.173 -38.850 1.00 68.68 ATOM 41 CB PRO A 228 -51.756 -0.575 -40.386 1.00 63.98 ATOM 42 CG PRO A 228 -53.029 0.177 -40.243 1.00 63.51 ATOM 43 CD PRO A 228 -53.995 -0.413 -41.247 1.00 60.61 ATOM 44 N VAL A 229 -53.599 -3.236 -39.125 1.00 58.94 ATOM 45 CA VAL A 229 -53.837 -4.063 -37.943 1.00 67.02 ATOM 46 C VAL A 229 -54.127 -5.514 -38.314 1.00 71.93 ATOM 47 O VAL A 229 -53.522 -6.435 -37.764 1.00 72.64 ATOM 48 CB VAL A 229 -54.988 -3.471 -37.101 1.00 61.80 ATOM 49 CG1 VAL A 229 -55.130 -4.233 -35.793 1.00 67.94 ATOM 50 CG2 VAL A 229 -54.757 -1.980 -36.839 1.00 64.52 ATOM 51 N CYS A 230 -55.023 -5.741 -39.274 1.00 64.28 ATOM 52 CA CYS A 230 -55.425 -7.094 -39.627 1.00 69.09 ATOM 53 C CYS A 230 -54.925 -7.526 -40.993 1.00 69.24 ATOM 54 O CYS A 230 -55.054 -8.706 -41.338 1.00 65.82 ATOM 55 CB CYS A 230 -56.957 -7.239 -39.566 1.00 63.51 ATOM 56 SG CYS A 230 -57.899 -6.542 -40.962 1.00 60.13 ATOM 57 N GLY A 231 -54.374 -6.606 -41.779 1.00 73.31 ATOM 58 CA GLY A 231 -53.831 -6.957 -43.072 1.00 68.90 ATOM 59 C GLY A 231 -54.863 -7.207 -44.141 1.00 74.27 ATOM 60 O GLY A 231 -54.592 -7.953 -45.088 1.00 84.54 ATOM 61 N MET A 232 -56.044 -6.611 -44.026 1.00 71.94 ATOM 62 CA MET A 232 -57.056 -6.812 -45.049 1.00 76.55 ATOM 63 C MET A 232 -56.770 -5.911 -46.242 1.00 69.93 ATOM 64 O MET A 232 -56.388 -4.749 -46.087 1.00 68.95 ATOM 65 CB MET A 232 -58.461 -6.538 -44.506 1.00 67.46 ATOM 66 CG MET A 232 -59.554 -7.141 -45.395 1.00 67.76 ATOM 67 SD MET A 232 -61.252 -6.842 -44.864 1.00 61.62 ATOM 68 CE MET A 232 -61.191 -5.115 -44.404 1.00 58.40 ATOM 69 N ASN A 233 -56.968 -6.463 -47.432 1.00 77.52 ATOM 70 CA ASN A 233 -56.846 -5.722 -48.679 1.00 76.60 ATOM 71 C ASN A 233 -57.961 -4.684 -48.751 1.00 72.00 ATOM 72 O ASN A 233 -59.133 -5.026 -48.935 1.00 69.32 ATOM 73 CB ASN A 233 -56.900 -6.693 -49.856 1.00 77.13 ATOM 74 CG ASN A 233 -56.443 -6.071 -51.158 1.00 80.82 ATOM 75 OD1 ASN A 233 -56.576 -4.868 -51.366 1.00 80.01 ATOM 76 ND2 ASN A 233 -55.884 -6.893 -52.041 1.00 85.35 ATOM 77 N LEU A 234 -57.604 -3.420 -48.580 1.00 77.98 ATOM 78 CA LEU A 234 -58.565 -2.329 -48.615 1.00 68.69 ATOM 79 C LEU A 234 -58.744 -1.730 -50.006 1.00 71.78 ATOM 80 O LEU A 234 -59.570 -0.829 -50.168 1.00 74.23 ATOM 81 CB LEU A 234 -58.144 -1.244 -47.623 1.00 76.17 ATOM 82 CG LEU A 234 -58.191 -1.709 -46.164 1.00 67.25 ATOM 83 CD1 LEU A 234 -57.645 -0.641 -45.233 1.00 60.51 ATOM 84 CD2 LEU A 234 -59.620 -2.079 -45.786 1.00 59.20 ATOM 85 N ASP A 235 -58.008 -2.213 -51.013 1.00 74.80 ATOM 86 CA ASP A 235 -58.146 -1.661 -52.360 1.00 83.70 ATOM 87 C ASP A 235 -59.528 -1.902 -52.950 1.00 77.98 ATOM 88 O ASP A 235 -59.943 -1.164 -53.850 1.00 80.01 ATOM 89 CB ASP A 235 -57.081 -2.247 -53.289 1.00 83.36 ATOM 90 CG ASP A 235 -55.674 -1.942 -52.824 1.00 92.92 ATOM 91 OD1 ASP A 235 -55.446 -0.829 -52.307 1.00 98.24 ATOM 92 OD2 ASP A 235 -54.797 -2.819 -52.975 1.00106.75 ATOM 93 N ASN A 236 -60.253 -2.909 -52.464 1.00 80.70 ATOM 94 CA ASN A 236 -61.592 -3.212 -52.950 1.00 78.16 ATOM 95 C ASN A 236 -62.675 -2.676 -52.021 1.00 74.20 ATOM 96 O ASN A 236 -63.767 -3.250 -51.955 1.00 70.96 ATOM 97 CB ASN A 236 -61.766 -4.721 -53.141 1.00 77.28 ATOM 98 CG ASN A 236 -60.797 -5.303 -54.162 1.00 83.58 ATOM 99 OD1 ASN A 236 -59.881 -6.042 -53.806 1.00 95.88 ATOM 100 ND2 ASN A 236 -61.002 -4.979 -55.437 1.00 85.58 ATOM 101 N ALA A 237 -62.414 -1.570 -51.323 1.00 73.12 ATOM 102 CA ALA A 237 -63.447 -0.982 -50.481 1.00 70.22 ATOM 103 C ALA A 237 -64.335 -0.081 -51.329 1.00 74.07 ATOM 104 O ALA A 237 -63.911 0.438 -52.368 1.00 71.33 ATOM 105 CB ALA A 237 -62.832 -0.195 -49.325 1.00 63.49 ATOM 106 N SER A 238 -65.580 0.097 -50.875 1.00 65.80 ATOM 107 CA SER A 238 -66.556 0.837 -51.673 1.00 73.17 ATOM 108 C SER A 238 -66.106 2.273 -51.921 1.00 74.66 ATOM 109 O SER A 238 -66.347 2.825 -53.002 1.00 78.28 ATOM 110 CB SER A 238 -67.930 0.799 -51.001 1.00 70.50 ATOM 111 OG SER A 238 -67.846 1.177 -49.640 1.00 78.80 ATOM 112 N ASN A 239 -65.463 2.896 -50.936 1.00 72.44 ATOM 113 CA ASN A 239 -64.847 4.206 -51.121 1.00 74.75 ATOM 114 C ASN A 239 -63.854 4.434 -49.989 1.00 75.95 ATOM 115 O ASN A 239 -63.624 3.557 -49.149 1.00 66.31 ATOM 116 CB ASN A 239 -65.895 5.321 -51.203 1.00 72.32 ATOM 117 CG ASN A 239 -66.859 5.311 -50.038 1.00 74.77 ATOM 118 OD1 ASN A 239 -66.478 5.083 -48.889 1.00 72.58 ATOM 119 ND2 ASN A 239 -68.128 5.550 -50.335 1.00 84.00 ATOM 120 N SER A 240 -63.264 5.634 -49.971 1.00 82.20 ATOM 121 CA SER A 240 -62.230 5.939 -48.986 1.00 78.50 ATOM 122 C SER A 240 -62.799 6.072 -47.576 1.00 68.86 ATOM 123 O SER A 240 -62.115 5.722 -46.607 1.00 64.40 ATOM 124 CB SER A 240 -61.483 7.217 -49.374 1.00 83.31 ATOM 125 OG SER A 240 -62.335 8.350 -49.334 1.00 88.34 ATOM 126 N GLU A 241 -64.028 6.582 -47.433 1.00 71.77 ATOM 127 CA GLU A 241 -64.616 6.694 -46.101 1.00 67.95 ATOM 128 C GLU A 241 -64.777 5.321 -45.471 1.00 64.23 ATOM 129 O GLU A 241 -64.377 5.103 -44.323 1.00 59.90 ATOM 130 CB GLU A 241 -65.974 7.402 -46.154 1.00 66.28 ATOM 131 CG GLU A 241 -65.922 8.921 -46.222 1.00 73.62 ATOM 132 CD GLU A 241 -65.730 9.457 -47.638 1.00 93.59 ATOM 133 OE1 GLU A 241 -65.856 8.670 -48.607 1.00 88.29 ATOM 134 OE2 GLU A 241 -65.465 10.674 -47.780 1.00 92.97 ATOM 135 N SER A 242 -65.336 4.369 -46.223 1.00 65.76 ATOM 136 CA SER A 242 -65.557 3.036 -45.670 1.00 63.48 ATOM 137 C SER A 242 -64.237 2.328 -45.374 1.00 60.09 ATOM 138 O SER A 242 -64.133 1.585 -44.390 1.00 58.55 ATOM 139 CB SER A 242 -66.425 2.205 -46.618 1.00 59.98 ATOM 140 OG SER A 242 -65.726 1.832 -47.789 1.00 63.93 ATOM 141 N ALA A 243 -63.212 2.556 -46.200 1.00 62.22 ATOM 142 CA ALA A 243 -61.896 1.995 -45.912 1.00 59.00 ATOM 143 C ALA A 243 -61.339 2.561 -44.612 1.00 54.48 ATOM 144 O ALA A 243 -60.915 1.807 -43.727 1.00 54.66 ATOM 145 CB ALA A 243 -60.935 2.266 -47.074 1.00 60.08 ATOM 146 N ALA A 244 -61.356 3.892 -44.472 1.00 54.42 ATOM 147 CA ALA A 244 -60.876 4.511 -43.239 1.00 54.33 ATOM 148 C ALA A 244 -61.701 4.048 -42.046 1.00 59.66 ATOM 149 O ALA A 244 -61.154 3.751 -40.977 1.00 56.93 ATOM 150 CB ALA A 244 -60.923 6.034 -43.358 1.00 54.14 ATOM 151 N ARG A 245 -63.021 3.948 -42.225 1.00 53.74 ATOM 152 CA ARG A 245 -63.882 3.535 -41.129 1.00 52.94 ATOM 153 C ARG A 245 -63.568 2.116 -40.679 1.00 56.90 ATOM 154 O ARG A 245 -63.653 1.824 -39.481 1.00 49.91 ATOM 155 CB ARG A 245 -65.349 3.671 -41.536 1.00 57.11 ATOM 156 CG ARG A 245 -66.297 3.794 -40.360 1.00 61.54 ATOM 157 CD ARG A 245 -67.730 4.075 -40.787 1.00 66.29 ATOM 158 NE ARG A 245 -67.875 5.355 -41.472 1.00 76.12 ATOM 159 CZ ARG A 245 -68.306 5.494 -42.720 1.00 80.38 ATOM 160 NH1 ARG A 245 -68.655 4.446 -43.456 1.00 65.33 ATOM 161 NH2 ARG A 245 -68.398 6.716 -43.241 1.00 82.63 ATOM 162 N HIS A 246 -63.186 1.224 -41.610 1.00 52.86 ATOM 163 CA HIS A 246 -62.759 -0.117 -41.205 1.00 50.77 ATOM 164 C HIS A 246 -61.519 -0.060 -40.324 1.00 50.75 ATOM 165 O HIS A 246 -61.428 -0.761 -39.308 1.00 51.00 ATOM 166 CB HIS A 246 -62.436 -1.011 -42.407 1.00 53.39 ATOM 167 CG HIS A 246 -61.450 -2.083 -42.054 1.00 49.84 ATOM 168 ND1 HIS A 246 -61.821 -3.258 -41.433 1.00 49.26 ATOM 169 CD2 HIS A 246 -60.094 -2.095 -42.098 1.00 57.22 ATOM 170 CE1 HIS A 246 -60.742 -3.974 -41.171 1.00 50.54 ATOM 171 NE2 HIS A 246 -59.679 -3.286 -41.555 1.00 51.84 ATOM 172 N VAL A 247 -60.525 0.725 -40.746 1.00 47.78 ATOM 173 CA VAL A 247 -59.270 0.863 -40.006 1.00 53.03 ATOM 174 C VAL A 247 -59.531 1.382 -38.601 1.00 53.17 ATOM 175 O VAL A 247 -59.052 0.820 -37.606 1.00 51.84 ATOM 176 CB VAL A 247 -58.312 1.798 -40.766 1.00 52.67 ATOM 177 CG1 VAL A 247 -57.026 2.027 -39.974 1.00 51.68 ATOM 178 CG2 VAL A 247 -58.011 1.232 -42.151 1.00 55.91 ATOM 179 N GLU A 248 -60.304 2.460 -38.501 1.00 48.81 ATOM 180 CA GLU A 248 -60.564 3.075 -37.210 1.00 47.53 ATOM 181 C GLU A 248 -61.333 2.163 -36.269 1.00 50.98 ATOM 182 O GLU A 248 -61.286 2.376 -35.051 1.00 44.85 ATOM 183 CB GLU A 248 -61.314 4.378 -37.426 1.00 42.91 ATOM 184 CG GLU A 248 -60.480 5.428 -38.141 1.00 49.33 ATOM 185 CD GLU A 248 -61.328 6.516 -38.753 1.00 52.13 ATOM 186 OE1 GLU A 248 -62.545 6.551 -38.463 1.00 45.57 ATOM 187 OE2 GLU A 248 -60.775 7.338 -39.516 1.00 56.28 ATOM 188 N SER A 249 -61.981 1.117 -36.796 1.00 49.15 ATOM 189 CA SER A 249 -62.714 0.183 -35.953 1.00 41.09 ATOM 190 C SER A 249 -61.796 -0.644 -35.069 1.00 46.08 ATOM 191 O SER A 249 -62.295 -1.342 -34.182 1.00 40.00 ATOM 192 CB SER A 249 -63.579 -0.753 -36.794 1.00 44.34 ATOM 193 OG SER A 249 -62.825 -1.806 -37.374 1.00 48.47 ATOM 194 N HIS A 250 -60.488 -0.623 -35.319 1.00 51.16 ATOM 195 CA HIS A 250 -59.518 -1.313 -34.481 1.00 48.37 ATOM 196 C HIS A 250 -59.028 -0.473 -33.310 1.00 52.22 ATOM 197 O HIS A 250 -58.155 -0.943 -32.569 1.00 50.09 ATOM 198 CB HIS A 250 -58.308 -1.745 -35.308 1.00 51.86 ATOM 199 CG HIS A 250 -58.612 -2.796 -36.324 1.00 56.39 ATOM 200 ND1 HIS A 250 -59.031 -4.061 -35.977 1.00 56.59 ATOM 201 CD2 HIS A 250 -58.532 -2.781 -37.676 1.00 47.59 ATOM 202 CE1 HIS A 250 -59.212 -4.777 -37.072 1.00 57.43 ATOM 203 NE2 HIS A 250 -58.918 -4.023 -38.116 1.00 56.06 ATOM 204 N PHE A 251 -59.576 0.729 -33.116 1.00 46.64 ATOM 205 CA PHE A 251 -59.058 1.645 -32.108 1.00 45.23 ATOM 206 C PHE A 251 -59.005 0.960 -30.745 1.00 46.79 ATOM 207 O PHE A 251 -59.952 0.257 -30.367 1.00 43.18 ATOM 208 CB PHE A 251 -59.931 2.904 -32.030 1.00 44.66 ATOM 209 CG PHE A 251 -59.529 3.857 -30.936 1.00 46.03 ATOM 210 CD1 PHE A 251 -58.543 4.807 -31.152 1.00 49.10 ATOM 211 CD2 PHE A 251 -60.132 3.800 -29.687 1.00 46.03 ATOM 212 CE1 PHE A 251 -58.160 5.675 -30.143 1.00 46.71 ATOM 213 CE2 PHE A 251 -59.765 4.678 -28.682 1.00 45.04 ATOM 214 CZ PHE A 251 -58.772 5.613 -28.912 1.00 45.18 ATOM 215 N PRO A 252 -57.923 1.142 -29.973 1.00 48.21 ATOM 216 CA PRO A 252 -56.776 2.000 -30.295 1.00 48.64 ATOM 217 C PRO A 252 -55.618 1.313 -31.013 1.00 50.89 ATOM 218 O PRO A 252 -54.568 1.930 -31.163 1.00 55.86 ATOM 219 CB PRO A 252 -56.322 2.484 -28.920 1.00 50.57 ATOM 220 CG PRO A 252 -56.661 1.353 -28.002 1.00 54.19 ATOM 221 CD PRO A 252 -57.876 0.658 -28.579 1.00 48.03 ATOM 222 ZN ZN A 604 -58.421 -4.304 -40.180 1.00 54.84 TER