HEADER HYDROLASE 31-DEC-69 7OJE TITLE Crystal structure of the covalent complex between Tribolium castaneum TITLE 2 deubiquitinase ZUP and Ubiquitin-PA COMPND MOL_ID: 1; COMPND 2 MOLECULE: Lys-63-specific deubiquitinase ZUFSP; COMPND 3 CHAIN: A, C; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.05 ANGSTORMS DBREF 7OJE C 218 592 UNP D6WWN1 D6WWN1_TRIC 218 592 SEQRES 1 C 31 SER CYS PRO VAL CYS GLY MET ASN LEU ASP ASN ALA SER SEQRES 2 C 31 ASN SER GLU SER ALA ALA ARG HIS VAL GLU SER HIS PHE SEQRES 3 C 31 PRO ALA THR SER PRO ATOM 1 N SER C 226 -49.518 26.502 21.895 1.00119.18 ATOM 2 CA SER C 226 -50.110 25.188 21.670 1.00125.72 ATOM 3 C SER C 226 -49.794 24.647 20.269 1.00131.68 ATOM 4 O SER C 226 -50.459 25.007 19.296 1.00124.69 ATOM 5 CB SER C 226 -51.624 25.250 21.881 1.00108.70 ATOM 6 N CYS C 227 -48.783 23.783 20.175 1.00134.85 ATOM 7 CA CYS C 227 -48.398 23.177 18.895 1.00131.83 ATOM 8 C CYS C 227 -49.458 22.192 18.422 1.00127.64 ATOM 9 O CYS C 227 -49.780 21.248 19.154 1.00128.71 ATOM 10 CB CYS C 227 -47.054 22.462 19.015 1.00130.00 ATOM 11 SG CYS C 227 -46.546 21.597 17.500 1.00110.23 ATOM 12 N PRO C 228 -50.005 22.346 17.212 1.00124.44 ATOM 13 CA PRO C 228 -51.101 21.462 16.788 1.00124.46 ATOM 14 C PRO C 228 -50.671 20.026 16.537 1.00117.77 ATOM 15 O PRO C 228 -51.538 19.180 16.287 1.00115.49 ATOM 16 CB PRO C 228 -51.604 22.119 15.494 1.00117.94 ATOM 17 CG PRO C 228 -51.068 23.519 15.529 1.00118.30 ATOM 18 CD PRO C 228 -49.756 23.418 16.236 1.00123.61 ATOM 19 N VAL C 229 -49.377 19.719 16.590 1.00111.35 ATOM 20 CA VAL C 229 -48.889 18.362 16.411 1.00108.06 ATOM 21 C VAL C 229 -48.396 17.764 17.725 1.00110.90 ATOM 22 O VAL C 229 -48.702 16.609 18.034 1.00109.30 ATOM 23 CB VAL C 229 -47.792 18.305 15.324 1.00 99.59 ATOM 24 CG1 VAL C 229 -47.448 16.860 14.988 1.00 93.44 ATOM 25 CG2 VAL C 229 -48.242 19.054 14.076 1.00 98.64 ATOM 26 N CYS C 230 -47.627 18.530 18.512 1.00117.12 ATOM 27 CA CYS C 230 -47.047 18.044 19.762 1.00123.34 ATOM 28 C CYS C 230 -47.633 18.681 21.016 1.00131.90 ATOM 29 O CYS C 230 -47.370 18.184 22.116 1.00131.51 ATOM 30 CB CYS C 230 -45.528 18.278 19.780 1.00116.83 ATOM 31 SG CYS C 230 -44.607 17.583 18.396 1.00120.18 ATOM 32 N GLY C 231 -48.403 19.760 20.892 1.00147.05 ATOM 33 CA GLY C 231 -48.984 20.390 22.063 1.00150.73 ATOM 34 C GLY C 231 -48.020 21.212 22.891 1.00152.72 ATOM 35 O GLY C 231 -48.231 21.367 24.098 1.00163.58 ATOM 36 N MET C 232 -46.969 21.751 22.275 1.00148.07 ATOM 37 CA MET C 232 -45.972 22.538 22.990 1.00146.68 ATOM 38 C MET C 232 -46.443 23.965 23.234 1.00148.35 ATOM 39 O MET C 232 -47.103 24.573 22.386 1.00146.57 ATOM 40 CB MET C 232 -44.662 22.583 22.207 1.00140.38 ATOM 41 CG MET C 232 -43.755 21.397 22.401 1.00135.36 ATOM 42 SD MET C 232 -42.239 21.650 21.467 1.00135.09 ATOM 43 CE MET C 232 -41.907 23.376 21.823 1.00123.11 ATOM 44 N ASN C 233 -46.091 24.501 24.403 1.00149.42 ATOM 45 CA ASN C 233 -46.348 25.905 24.702 1.00147.29 ATOM 46 C ASN C 233 -45.486 26.756 23.779 1.00145.81 ATOM 47 O ASN C 233 -44.270 26.862 23.973 1.00142.66 ATOM 48 CB ASN C 233 -46.043 26.197 26.169 1.00141.88 ATOM 49 CG ASN C 233 -46.602 27.532 26.632 1.00143.06 ATOM 50 OD1 ASN C 233 -46.757 28.465 25.845 1.00143.04 ATOM 51 ND2 ASN C 233 -46.906 27.626 27.921 1.00139.01 ATOM 52 N LEU C 234 -46.111 27.362 22.771 1.00146.07 ATOM 53 CA LEU C 234 -45.388 28.159 21.789 1.00148.62 ATOM 54 C LEU C 234 -45.290 29.631 22.166 1.00149.01 ATOM 55 O LEU C 234 -44.620 30.392 21.458 1.00144.50 ATOM 56 CB LEU C 234 -46.057 28.031 20.415 1.00147.60 ATOM 57 CG LEU C 234 -46.064 26.645 19.767 1.00141.49 ATOM 58 CD1 LEU C 234 -46.837 26.672 18.455 1.00135.57 ATOM 59 CD2 LEU C 234 -44.649 26.131 19.557 1.00137.17 ATOM 60 N ASP C 235 -45.934 30.053 23.257 1.00147.92 ATOM 61 CA ASP C 235 -45.845 31.446 23.677 1.00139.37 ATOM 62 C ASP C 235 -44.441 31.824 24.131 1.00133.53 ATOM 63 O ASP C 235 -44.093 33.009 24.104 1.00121.60 ATOM 64 CB ASP C 235 -46.850 31.723 24.799 1.00133.41 ATOM 65 N ASN C 236 -43.629 30.844 24.537 1.00138.88 ATOM 66 CA ASN C 236 -42.282 31.078 25.043 1.00131.45 ATOM 67 C ASN C 236 -41.199 30.782 24.006 1.00125.18 ATOM 68 O ASN C 236 -40.103 30.333 24.356 1.00124.43 ATOM 69 CB ASN C 236 -42.065 30.257 26.311 1.00139.46 ATOM 70 CG ASN C 236 -43.062 30.610 27.402 1.00142.11 ATOM 71 OD1 ASN C 236 -43.944 29.815 27.734 1.00144.13 ATOM 72 ND2 ASN C 236 -42.936 31.813 27.953 1.00129.20 ATOM 73 N ALA C 237 -41.493 31.011 22.733 1.00127.61 ATOM 74 CA ALA C 237 -40.526 30.873 21.657 1.00119.50 ATOM 75 C ALA C 237 -39.737 32.169 21.490 1.00108.01 ATOM 76 O ALA C 237 -40.161 33.242 21.925 1.00109.56 ATOM 77 CB ALA C 237 -41.222 30.504 20.345 1.00117.20 ATOM 78 N SER C 238 -38.561 32.049 20.868 1.00103.91 ATOM 79 CA SER C 238 -37.690 33.210 20.696 1.00103.74 ATOM 80 C SER C 238 -38.375 34.311 19.886 1.00106.06 ATOM 81 O SER C 238 -38.191 35.503 20.167 1.00104.53 ATOM 82 CB SER C 238 -36.379 32.781 20.038 1.00101.52 ATOM 83 OG SER C 238 -36.627 32.008 18.875 1.00 99.58 ATOM 84 N ASN C 239 -39.171 33.937 18.884 1.00 97.91 ATOM 85 CA ASN C 239 -40.005 34.886 18.152 1.00 94.10 ATOM 86 C ASN C 239 -41.104 34.109 17.437 1.00 96.40 ATOM 87 O ASN C 239 -41.189 32.882 17.535 1.00 94.37 ATOM 88 CB ASN C 239 -39.177 35.730 17.175 1.00 93.63 ATOM 89 CG ASN C 239 -38.335 34.892 16.237 1.00 99.06 ATOM 90 OD1 ASN C 239 -38.774 33.858 15.734 1.00102.12 ATOM 91 ND2 ASN C 239 -37.101 35.328 16.011 1.00 96.01 ATOM 92 N SER C 240 -41.947 34.836 16.700 1.00 97.67 ATOM 93 CA SER C 240 -43.079 34.191 16.043 1.00 91.41 ATOM 94 C SER C 240 -42.639 33.334 14.861 1.00 95.93 ATOM 95 O SER C 240 -43.248 32.292 14.595 1.00 94.09 ATOM 96 CB SER C 240 -44.102 35.239 15.600 1.00 90.55 ATOM 97 OG SER C 240 -43.566 36.105 14.618 1.00100.59 ATOM 98 N GLU C 241 -41.594 33.754 14.143 1.00 98.50 ATOM 99 CA GLU C 241 -41.113 32.980 13.002 1.00 95.32 ATOM 100 C GLU C 241 -40.569 31.624 13.436 1.00 92.44 ATOM 101 O GLU C 241 -40.868 30.597 12.817 1.00 91.99 ATOM 102 CB GLU C 241 -40.057 33.776 12.237 1.00101.68 ATOM 103 CG GLU C 241 -40.665 34.806 11.304 1.00105.36 ATOM 104 CD GLU C 241 -41.043 36.094 12.018 1.00113.21 ATOM 105 OE1 GLU C 241 -40.620 36.286 13.182 1.00104.61 ATOM 106 OE2 GLU C 241 -41.783 36.905 11.419 1.00118.67 ATOM 107 N SER C 242 -39.761 31.599 14.497 1.00 91.55 ATOM 108 CA SER C 242 -39.189 30.332 14.943 1.00 90.27 ATOM 109 C SER C 242 -40.266 29.369 15.430 1.00 89.75 ATOM 110 O SER C 242 -40.122 28.151 15.274 1.00 90.60 ATOM 111 CB SER C 242 -38.143 30.575 16.033 1.00 96.87 ATOM 112 OG SER C 242 -38.737 31.000 17.247 1.00 99.92 ATOM 113 N ALA C 243 -41.342 29.885 16.032 1.00 86.31 ATOM 114 CA ALA C 243 -42.466 29.027 16.399 1.00 90.94 ATOM 115 C ALA C 243 -43.103 28.409 15.158 1.00 89.13 ATOM 116 O ALA C 243 -43.351 27.198 15.105 1.00 91.07 ATOM 117 CB ALA C 243 -43.500 29.825 17.198 1.00 90.90 ATOM 118 N ALA C 244 -43.369 29.234 14.144 1.00 89.23 ATOM 119 CA ALA C 244 -43.960 28.739 12.906 1.00 84.08 ATOM 120 C ALA C 244 -43.059 27.715 12.225 1.00 85.89 ATOM 121 O ALA C 244 -43.550 26.737 11.648 1.00 78.97 ATOM 122 CB ALA C 244 -44.244 29.907 11.963 1.00 82.74 ATOM 123 N ARG C 245 -41.739 27.925 12.275 1.00 85.66 ATOM 124 CA ARG C 245 -40.825 26.983 11.639 1.00 79.00 ATOM 125 C ARG C 245 -40.932 25.607 12.279 1.00 84.67 ATOM 126 O ARG C 245 -40.866 24.585 11.584 1.00 81.56 ATOM 127 CB ARG C 245 -39.387 27.499 11.716 1.00 86.71 ATOM 128 CG ARG C 245 -39.122 28.739 10.882 1.00 89.71 ATOM 129 CD ARG C 245 -37.673 28.807 10.406 1.00 89.11 ATOM 130 NE ARG C 245 -37.496 29.849 9.401 1.00 95.08 ATOM 131 CZ ARG C 245 -38.105 29.866 8.220 1.00 99.25 ATOM 132 NH1 ARG C 245 -38.955 28.913 7.861 1.00 81.76 ATOM 133 NH2 ARG C 245 -37.867 30.872 7.383 1.00100.36 ATOM 134 N HIS C 246 -41.114 25.564 13.603 1.00 80.30 ATOM 135 CA HIS C 246 -41.205 24.288 14.306 1.00 85.52 ATOM 136 C HIS C 246 -42.439 23.508 13.873 1.00 85.63 ATOM 137 O HIS C 246 -42.371 22.294 13.650 1.00 85.01 ATOM 138 CB HIS C 246 -41.223 24.510 15.818 1.00 87.06 ATOM 139 CG HIS C 246 -41.866 23.390 16.577 1.00 96.65 ATOM 140 ND1 HIS C 246 -41.204 22.218 16.876 1.00 94.61 ATOM 141 CD2 HIS C 246 -43.116 23.256 17.082 1.00 99.76 ATOM 142 CE1 HIS C 246 -42.018 21.413 17.537 1.00102.21 ATOM 143 NE2 HIS C 246 -43.184 22.018 17.673 1.00102.10 ATOM 144 N VAL C 247 -43.590 24.182 13.796 1.00 83.40 ATOM 145 CA VAL C 247 -44.815 23.513 13.358 1.00 90.65 ATOM 146 C VAL C 247 -44.630 22.960 11.951 1.00 78.12 ATOM 147 O VAL C 247 -44.905 21.785 11.682 1.00 74.82 ATOM 148 CB VAL C 247 -46.014 24.474 13.438 1.00 81.01 ATOM 149 CG1 VAL C 247 -47.267 23.783 12.944 1.00 80.75 ATOM 150 CG2 VAL C 247 -46.199 24.977 14.867 1.00 89.91 ATOM 151 N GLU C 248 -44.117 23.798 11.047 1.00 72.51 ATOM 152 CA GLU C 248 -43.888 23.416 9.660 1.00 70.20 ATOM 153 C GLU C 248 -42.845 22.313 9.513 1.00 71.52 ATOM 154 O GLU C 248 -42.723 21.729 8.430 1.00 68.61 ATOM 155 CB GLU C 248 -43.473 24.654 8.864 1.00 68.25 ATOM 156 CG GLU C 248 -44.570 25.698 8.816 1.00 68.48 ATOM 157 CD GLU C 248 -44.079 27.063 8.410 1.00 69.97 ATOM 158 OE1 GLU C 248 -42.926 27.169 7.950 1.00 74.77 ATOM 159 OE2 GLU C 248 -44.851 28.029 8.558 1.00 71.83 ATOM 160 N SER C 249 -42.052 22.046 10.552 1.00 72.58 ATOM 161 CA SER C 249 -41.099 20.945 10.472 1.00 78.95 ATOM 162 C SER C 249 -41.788 19.583 10.501 1.00 79.77 ATOM 163 O SER C 249 -41.177 18.583 10.108 1.00 78.40 ATOM 164 CB SER C 249 -40.075 21.045 11.610 1.00 80.38 ATOM 165 OG SER C 249 -40.625 20.619 12.851 1.00 75.72 ATOM 166 N HIS C 250 -43.054 19.525 10.905 1.00 80.34 ATOM 167 CA HIS C 250 -43.807 18.281 10.936 1.00 77.05 ATOM 168 C HIS C 250 -44.458 17.941 9.592 1.00 79.10 ATOM 169 O HIS C 250 -45.250 16.994 9.531 1.00 72.07 ATOM 170 CB HIS C 250 -44.868 18.343 12.044 1.00 79.72 ATOM 171 CG HIS C 250 -44.298 18.374 13.433 1.00 86.76 ATOM 172 ND1 HIS C 250 -43.602 17.315 13.978 1.00 88.86 ATOM 173 CD2 HIS C 250 -44.323 19.335 14.388 1.00 91.17 ATOM 174 CE1 HIS C 250 -43.224 17.622 15.208 1.00 84.60 ATOM 175 NE2 HIS C 250 -43.646 18.843 15.481 1.00 88.19 ATOM 176 N PHE C 251 -44.156 18.701 8.533 1.00 75.07 ATOM 177 CA PHE C 251 -44.791 18.514 7.227 1.00 68.42 ATOM 178 C PHE C 251 -44.605 17.078 6.734 1.00 75.27 ATOM 179 O PHE C 251 -43.499 16.527 6.828 1.00 69.24 ATOM 180 CB PHE C 251 -44.206 19.508 6.213 1.00 67.00 ATOM 181 CG PHE C 251 -44.694 19.319 4.793 1.00 66.26 ATOM 182 CD1 PHE C 251 -45.873 19.908 4.365 1.00 65.30 ATOM 183 CD2 PHE C 251 -43.952 18.581 3.880 1.00 65.40 ATOM 184 CE1 PHE C 251 -46.323 19.740 3.052 1.00 66.17 ATOM 185 CE2 PHE C 251 -44.382 18.412 2.577 1.00 68.00 ATOM 186 CZ PHE C 251 -45.575 18.991 2.158 1.00 64.07 ATOM 187 N PRO C 252 -45.653 16.452 6.155 1.00 69.43 ATOM 188 CA PRO C 252 -46.960 17.062 5.884 1.00 75.35 ATOM 189 C PRO C 252 -47.998 16.858 6.980 1.00 69.10 ATOM 190 O PRO C 252 -49.157 17.199 6.768 1.00 69.01 ATOM 191 CB PRO C 252 -47.410 16.353 4.602 1.00 66.83 ATOM 192 CG PRO C 252 -46.830 14.981 4.739 1.00 68.12 ATOM 193 CD PRO C 252 -45.547 15.111 5.549 1.00 68.36 ATOM 194 N ALA C 253 -47.599 16.322 8.126 1.00 74.23 ATOM 195 CA ALA C 253 -48.563 16.049 9.184 1.00 77.98 ATOM 196 C ALA C 253 -49.086 17.359 9.756 1.00 74.30 ATOM 197 O ALA C 253 -48.317 18.292 10.006 1.00 72.38 ATOM 198 CB ALA C 253 -47.930 15.195 10.282 1.00 78.61 ATOM 199 N THR C 254 -50.399 17.440 9.941 1.00 73.39 ATOM 200 CA THR C 254 -51.011 18.637 10.499 1.00 83.38 ATOM 201 C THR C 254 -51.791 18.337 11.765 1.00 87.49 ATOM 202 O THR C 254 -52.314 19.266 12.393 1.00 86.28 ATOM 203 CB THR C 254 -51.932 19.316 9.464 1.00 79.85 ATOM 204 OG1 THR C 254 -53.019 18.448 9.121 1.00 81.40 ATOM 205 CG2 THR C 254 -51.157 19.655 8.202 1.00 70.83 ATOM 206 N SER C 255 -51.869 17.074 12.160 1.00 91.17 ATOM 207 CA SER C 255 -52.561 16.631 13.356 1.00 90.27 ATOM 208 C SER C 255 -51.698 15.596 14.057 1.00 94.54 ATOM 209 O SER C 255 -50.827 14.982 13.432 1.00 93.12 ATOM 210 CB SER C 255 -53.918 16.013 13.002 1.00 88.92 ATOM 211 OG SER C 255 -53.721 14.896 12.156 1.00 91.67 ATOM 212 N PRO C 256 -51.909 15.385 15.365 1.00 96.60 ATOM 213 CA PRO C 256 -51.211 14.313 16.084 1.00 98.19 ATOM 214 C PRO C 256 -51.608 12.929 15.568 1.00 86.82 ATOM 215 O PRO C 256 -50.744 12.066 15.412 1.00 95.60 ATOM 216 CB PRO C 256 -51.653 14.514 17.540 1.00 96.19 ATOM 217 CG PRO C 256 -52.914 15.306 17.455 1.00 94.06 ATOM 218 CD PRO C 256 -52.745 16.197 16.266 1.00100.54 ATOM 219 ZN ZN C 602 -44.681 20.237 17.182 1.00101.06 TER