HEADER HYDROLASE 31-DEC-69 7OK9 TITLE Crystal structure of Penicillin-Binding Protein 1 (PBP1) from TITLE 2 Staphylococcus aureus in complex with pentaglycine COMPND MOL_ID: 1; COMPND 2 MOLECULE: Penicillin-binding protein 1; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.36 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU H 95 REMARK 465 PRO H 96 REMARK 465 GLY H 97 REMARK 465 ILE H 98 REMARK 465 SER H 99 REMARK 465 LEU H 100 DBREF 7OK9 H 65 713 UNP A0A0H2WV A0A0H2WVW5_ 65 713 SEQRES 1 H 7 ARG TYR LYS LEU VAL ALA VAL SEQRES 1 H 29 PHE GLY ARG LYS GLY THR ASN LEU THR TYR GLN ASP LYS SEQRES 2 H 29 LEU LYS ILE GLU LYS MET ASN LEU PRO GLY ILE SER LEU SEQRES 3 H 29 LEU PRO GLU ATOM 1 N ARG H 82 -18.786 63.303 -96.265 1.00139.16 ATOM 2 CA ARG H 82 -18.149 64.604 -95.981 1.00141.79 ATOM 3 C ARG H 82 -16.690 64.392 -96.305 1.00146.97 ATOM 4 O ARG H 82 -16.327 63.369 -96.836 1.00167.52 ATOM 5 CB ARG H 82 -18.352 65.038 -94.522 1.00142.43 ATOM 6 CG ARG H 82 -19.773 65.470 -94.202 1.00144.16 ATOM 7 CD ARG H 82 -19.924 66.954 -93.893 1.00146.35 ATOM 8 NE ARG H 82 -21.325 67.302 -93.672 1.00146.31 ATOM 9 CZ ARG H 82 -22.013 67.087 -92.546 1.00141.75 ATOM 10 NH1 ARG H 82 -21.447 66.504 -91.503 1.00137.69 ATOM 11 NH2 ARG H 82 -23.279 67.448 -92.475 1.00140.43 ATOM 12 N TYR H 83 -15.850 65.404 -96.075 1.00141.04 ATOM 13 CA TYR H 83 -14.426 65.328 -96.520 1.00135.90 ATOM 14 C TYR H 83 -13.495 65.866 -95.447 1.00146.96 ATOM 15 O TYR H 83 -13.883 66.634 -94.503 1.00159.52 ATOM 16 CB TYR H 83 -14.252 66.036 -97.868 1.00121.93 ATOM 17 CG TYR H 83 -15.128 65.462 -98.958 1.00113.48 ATOM 18 CD1 TYR H 83 -14.772 64.326 -99.679 1.00107.73 ATOM 19 CD2 TYR H 83 -16.381 66.005 -99.183 1.00109.18 ATOM 20 CE1 TYR H 83 -15.615 63.793-100.639 1.00106.80 ATOM 21 CE2 TYR H 83 -17.236 65.483-100.140 1.00107.40 ATOM 22 CZ TYR H 83 -16.851 64.373-100.867 1.00107.36 ATOM 23 OH TYR H 83 -17.702 63.844-101.793 1.00110.33 ATOM 24 N LYS H 84 -12.240 65.530 -95.635 1.00154.48 ATOM 25 CA LYS H 84 -11.163 65.809 -94.658 1.00162.74 ATOM 26 C LYS H 84 -9.935 66.272 -95.372 1.00171.68 ATOM 27 O LYS H 84 -9.446 65.497 -96.119 1.00173.62 ATOM 28 CB LYS H 84 -10.918 64.522 -93.875 1.00162.50 ATOM 29 CG LYS H 84 -9.538 64.370 -93.245 1.00159.46 ATOM 30 CD LYS H 84 -9.515 63.380 -92.112 1.00153.95 ATOM 31 CE LYS H 84 -8.117 63.124 -91.587 1.00152.18 ATOM 32 NZ LYS H 84 -8.128 62.549 -90.219 1.00153.53 ATOM 33 N LEU H 85 -9.402 67.440 -95.054 1.00183.05 ATOM 34 CA LEU H 85 -8.092 67.874 -95.575 1.00191.52 ATOM 35 C LEU H 85 -6.978 67.198 -94.778 1.00225.36 ATOM 36 O LEU H 85 -6.978 67.268 -93.629 1.00252.01 ATOM 37 CB LEU H 85 -8.041 69.404 -95.476 1.00167.64 ATOM 38 CG LEU H 85 -6.822 70.064 -96.101 1.00146.60 ATOM 39 CD1 LEU H 85 -6.845 69.891 -97.607 1.00132.78 ATOM 40 CD2 LEU H 85 -6.725 71.515 -95.687 1.00143.47 ATOM 41 N VAL H 86 -5.998 66.582 -95.448 1.00239.95 ATOM 42 CA VAL H 86 -4.627 66.379 -94.909 1.00217.20 ATOM 43 C VAL H 86 -3.618 67.015 -95.886 1.00200.39 ATOM 44 O VAL H 86 -3.934 67.372 -97.096 1.00180.56 ATOM 45 CB VAL H 86 -4.350 64.882 -94.581 1.00208.14 ATOM 46 CG1 VAL H 86 -3.146 64.730 -93.655 1.00189.12 ATOM 47 CG2 VAL H 86 -5.548 64.189 -93.960 1.00205.29 ATOM 48 N ALA H 87 -2.351 67.064 -95.485 1.00179.22 ATOM 49 CA ALA H 87 -1.235 67.257 -96.439 1.00167.89 ATOM 50 C ALA H 87 -0.234 66.084 -96.434 1.00163.07 ATOM 51 O ALA H 87 -0.025 65.436 -95.361 1.00173.75 ATOM 52 CB ALA H 87 -0.603 68.581 -96.186 1.00163.22 ATOM 53 N VAL H 88 0.330 65.810 -97.596 1.00150.45 ATOM 54 CA VAL H 88 1.070 64.544 -97.849 1.00136.98 ATOM 55 C VAL H 88 2.385 64.622 -97.084 1.00133.27 ATOM 56 O VAL H 88 2.545 63.768 -96.230 1.00128.09 ATOM 57 CB VAL H 88 1.282 64.345 -99.348 1.00127.73 ATOM 58 CG1 VAL H 88 2.041 63.070 -99.700 1.00117.06 ATOM 59 CG2 VAL H 88 -0.032 64.370-100.113 1.00126.41 TER ATOM 1 N PHE H 138 -6.691 68.191 -90.031 1.00146.81 ATOM 2 CA PHE H 138 -6.175 69.312 -89.202 1.00139.59 ATOM 3 C PHE H 138 -7.167 69.563 -88.057 1.00138.47 ATOM 4 O PHE H 138 -7.977 70.557 -88.109 1.00127.51 ATOM 5 CB PHE H 138 -5.848 70.527 -90.064 1.00134.94 ATOM 6 CG PHE H 138 -4.864 70.172 -91.157 1.00132.96 ATOM 7 CD1 PHE H 138 -3.490 70.093 -90.915 1.00133.91 ATOM 8 CD2 PHE H 138 -5.318 69.888 -92.441 1.00128.87 ATOM 9 CE1 PHE H 138 -2.621 69.698 -91.911 1.00137.50 ATOM 10 CE2 PHE H 138 -4.430 69.526 -93.442 1.00130.58 ATOM 11 CZ PHE H 138 -3.086 69.434 -93.177 1.00131.96 ATOM 12 N GLY H 139 -7.173 68.614 -87.127 1.00150.24 ATOM 13 CA GLY H 139 -8.027 68.708 -85.919 1.00165.17 ATOM 14 C GLY H 139 -9.508 68.849 -86.269 1.00181.78 ATOM 15 O GLY H 139 -9.999 68.229 -87.296 1.00190.50 ATOM 16 N ARG H 140 -10.261 69.511 -85.386 1.00194.70 ATOM 17 CA ARG H 140 -11.739 69.666 -85.565 1.00196.30 ATOM 18 C ARG H 140 -11.945 70.260 -86.968 1.00197.29 ATOM 19 O ARG H 140 -12.850 69.743 -87.662 1.00209.42 ATOM 20 CB ARG H 140 -12.377 70.505 -84.459 1.00193.49 ATOM 21 CG ARG H 140 -11.995 70.112 -83.041 1.00193.64 ATOM 22 CD ARG H 140 -11.088 71.100 -82.317 1.00194.75 ATOM 23 NE ARG H 140 -9.704 70.644 -82.258 1.00196.82 ATOM 24 CZ ARG H 140 -8.676 71.137 -82.956 1.00198.75 ATOM 25 NH1 ARG H 140 -8.856 72.100 -83.845 1.00199.16 ATOM 26 NH2 ARG H 140 -7.465 70.631 -82.787 1.00200.67 ATOM 27 N LYS H 141 -11.104 71.195 -87.424 1.00185.55 ATOM 28 CA LYS H 141 -11.378 72.002 -88.615 1.00175.14 ATOM 29 C LYS H 141 -11.213 71.147 -89.871 1.00167.77 ATOM 30 O LYS H 141 -11.891 71.481 -90.921 1.00172.84 ATOM 31 CB LYS H 141 -10.451 73.242 -88.702 1.00174.03 ATOM 32 CG LYS H 141 -9.676 73.776 -87.476 1.00175.61 ATOM 33 CD LYS H 141 -10.154 75.070 -86.811 1.00175.87 ATOM 34 CE LYS H 141 -9.971 74.998 -85.311 1.00175.24 ATOM 35 NZ LYS H 141 -9.864 76.339 -84.694 1.00174.61 ATOM 36 N GLY H 142 -10.312 70.177 -89.801 1.00160.11 ATOM 37 CA GLY H 142 -9.955 69.283 -90.918 1.00156.88 ATOM 38 C GLY H 142 -10.870 68.074 -91.091 1.00155.71 ATOM 39 O GLY H 142 -10.380 66.997 -91.570 1.00146.80 ATOM 40 N THR H 143 -12.139 68.252 -90.696 1.00158.66 ATOM 41 CA THR H 143 -13.152 67.172 -90.770 1.00160.61 ATOM 42 C THR H 143 -14.494 67.768 -91.176 1.00156.08 ATOM 43 O THR H 143 -14.666 68.969 -91.034 1.00156.24 ATOM 44 CB THR H 143 -13.252 66.369 -89.468 1.00165.03 ATOM 45 OG1 THR H 143 -11.950 66.313 -88.882 1.00170.66 ATOM 46 CG2 THR H 143 -13.766 64.959 -89.690 1.00165.25 ATOM 47 N ASN H 144 -15.432 66.923 -91.605 1.00152.96 ATOM 48 CA ASN H 144 -16.861 67.290 -91.730 1.00150.27 ATOM 49 C ASN H 144 -16.939 68.466 -92.692 1.00148.55 ATOM 50 O ASN H 144 -17.778 69.443 -92.491 1.00151.52 ATOM 51 CB ASN H 144 -17.493 67.625 -90.368 1.00149.45 ATOM 52 CG ASN H 144 -18.282 66.480 -89.769 1.00150.87 ATOM 53 OD1 ASN H 144 -19.360 66.123 -90.261 1.00159.44 ATOM 54 ND2 ASN H 144 -17.752 65.898 -88.711 1.00147.20 ATOM 55 N LEU H 145 -16.153 68.386 -93.754 1.00145.75 ATOM 56 CA LEU H 145 -16.219 69.410 -94.833 1.00141.76 ATOM 57 C LEU H 145 -17.238 69.003 -95.904 1.00148.98 ATOM 58 O LEU H 145 -17.197 67.826 -96.349 1.00147.07 ATOM 59 CB LEU H 145 -14.828 69.606 -95.431 1.00135.24 ATOM 60 CG LEU H 145 -13.718 69.879 -94.404 1.00130.15 ATOM 61 CD1 LEU H 145 -12.331 69.679 -95.012 1.00133.29 ATOM 62 CD2 LEU H 145 -13.843 71.282 -93.830 1.00126.41 ATOM 63 N THR H 146 -18.173 69.936 -96.192 1.00156.98 ATOM 64 CA THR H 146 -19.380 69.592 -96.978 1.00166.65 ATOM 65 C THR H 146 -19.004 69.559 -98.440 1.00176.69 ATOM 66 O THR H 146 -17.929 70.078 -98.785 1.00189.13 ATOM 67 CB THR H 146 -20.521 70.584 -96.730 1.00164.60 ATOM 68 OG1 THR H 146 -20.049 71.877 -97.057 1.00159.41 ATOM 69 CG2 THR H 146 -21.017 70.583 -95.306 1.00167.35 ATOM 70 N TYR H 147 -19.922 69.032 -99.256 1.00178.44 ATOM 71 CA TYR H 147 -19.731 68.850-100.707 1.00179.82 ATOM 72 C TYR H 147 -19.656 70.209-101.424 1.00178.22 ATOM 73 O TYR H 147 -18.933 70.300-102.415 1.00181.36 ATOM 74 CB TYR H 147 -20.853 67.955-101.255 1.00182.20 ATOM 75 CG TYR H 147 -20.905 67.817-102.757 1.00191.44 ATOM 76 CD1 TYR H 147 -19.895 67.167-103.445 1.00203.06 ATOM 77 CD2 TYR H 147 -21.973 68.315-103.489 1.00189.13 ATOM 78 CE1 TYR H 147 -19.935 67.029-104.824 1.00203.29 ATOM 79 CE2 TYR H 147 -22.020 68.196-104.869 1.00194.15 ATOM 80 CZ TYR H 147 -21.008 67.532-105.537 1.00198.63 ATOM 81 OH TYR H 147 -21.020 67.422-106.898 1.00192.48 ATOM 82 N GLN H 148 -20.417 71.216-100.967 1.00181.61 ATOM 83 CA GLN H 148 -20.463 72.571-101.594 1.00188.53 ATOM 84 C GLN H 148 -19.228 73.370-101.171 1.00202.06 ATOM 85 O GLN H 148 -18.892 74.321-101.883 1.00209.77 ATOM 86 CB GLN H 148 -21.783 73.287-101.281 1.00187.39 ATOM 87 CG GLN H 148 -21.688 74.801-101.113 1.00190.84 ATOM 88 CD GLN H 148 -21.386 75.194 -99.686 1.00202.13 ATOM 89 OE1 GLN H 148 -20.707 74.479 -98.950 1.00218.45 ATOM 90 NE2 GLN H 148 -21.887 76.347 -99.278 1.00204.15 ATOM 91 N ASP H 149 -18.591 73.020-100.053 1.00204.04 ATOM 92 CA ASP H 149 -17.263 73.575 -99.645 1.00193.68 ATOM 93 C ASP H 149 -16.218 72.982-100.582 1.00199.01 ATOM 94 O ASP H 149 -15.289 73.716-100.996 1.00207.45 ATOM 95 CB ASP H 149 -16.904 73.249 -98.193 1.00173.20 ATOM 96 CG ASP H 149 -17.670 74.064 -97.146 1.00159.64 ATOM 97 OD1 ASP H 149 -17.997 75.242 -97.411 1.00163.17 ATOM 98 OD2 ASP H 149 -17.940 73.506 -96.049 1.00134.56 ATOM 99 N LYS H 150 -16.357 71.700-100.899 1.00190.29 ATOM 100 CA LYS H 150 -15.417 71.023-101.821 1.00179.37 ATOM 101 C LYS H 150 -15.510 71.688-103.189 1.00192.27 ATOM 102 O LYS H 150 -14.478 71.988-103.777 1.00214.79 ATOM 103 CB LYS H 150 -15.744 69.526-101.901 1.00160.77 ATOM 104 CG LYS H 150 -14.523 68.643-102.181 1.00145.60 ATOM 105 CD LYS H 150 -14.871 67.279-102.738 1.00138.60 ATOM 106 CE LYS H 150 -15.974 67.356-103.769 1.00137.96 ATOM 107 NZ LYS H 150 -16.457 66.018-104.170 1.00136.85 ATOM 108 N LEU H 151 -16.724 71.903-103.682 1.00186.00 ATOM 109 CA LEU H 151 -16.968 72.584-104.983 1.00169.88 ATOM 110 C LEU H 151 -16.312 73.966-104.957 1.00158.12 ATOM 111 O LEU H 151 -15.677 74.324-105.959 1.00140.50 ATOM 112 CB LEU H 151 -18.477 72.675-105.231 1.00170.48 ATOM 113 CG LEU H 151 -19.175 71.346-105.527 1.00172.31 ATOM 114 CD1 LEU H 151 -20.641 71.574-105.828 1.00173.18 ATOM 115 CD2 LEU H 151 -18.518 70.573-106.675 1.00171.83 ATOM 116 N LYS H 152 -16.454 74.701-103.840 1.00160.24 ATOM 117 CA LYS H 152 -15.886 76.077-103.700 1.00157.97 ATOM 118 C LYS H 152 -14.384 76.025-103.973 1.00150.63 ATOM 119 O LYS H 152 -13.893 76.977-104.611 1.00169.95 ATOM 120 CB LYS H 152 -16.145 76.646-102.300 1.00162.48 ATOM 121 CG LYS H 152 -17.471 77.375-102.150 1.00164.29 ATOM 122 CD LYS H 152 -17.903 77.465-100.699 1.00170.24 ATOM 123 CE LYS H 152 -16.925 78.197 -99.793 1.00174.07 ATOM 124 NZ LYS H 152 -16.255 77.307 -98.804 1.00178.91 ATOM 125 N ILE H 153 -13.668 75.029-103.481 1.00138.40 ATOM 126 CA ILE H 153 -12.207 74.880-103.782 1.00122.99 ATOM 127 C ILE H 153 -12.099 74.145-105.109 1.00119.58 ATOM 128 O ILE H 153 -12.115 72.913-105.108 1.00110.07 ATOM 129 CB ILE H 153 -11.516 74.019-102.691 1.00115.37 ATOM 130 CG1 ILE H 153 -11.908 74.388-101.249 1.00108.08 ATOM 131 CG2 ILE H 153 -10.018 74.047-102.909 1.00113.64 ATOM 132 CD1 ILE H 153 -11.832 73.238-100.308 1.00106.57 ATOM 133 N GLU H 154 -12.020 74.881-106.200 1.00129.57 ATOM 134 CA GLU H 154 -11.904 74.310-107.565 1.00134.83 ATOM 135 C GLU H 154 -10.564 74.756-108.143 1.00138.91 ATOM 136 O GLU H 154 -10.172 75.940-108.037 1.00148.13 ATOM 137 CB GLU H 154 -13.097 74.700-108.454 1.00 50.00 ATOM 138 CG GLU H 154 -13.087 76.149-108.954 1.00 50.00 ATOM 139 CD GLU H 154 -13.526 77.198-107.916 1.00 50.00 ATOM 140 OE1 GLU H 154 -14.738 77.168-107.551 1.00 50.00 ATOM 141 OE2 GLU H 154 -12.646 78.005-107.396 1.00 47.76 ATOM 142 N LYS H 155 -9.772 73.803-108.625 1.00136.30 ATOM 143 CA LYS H 155 -8.460 74.002-109.348 1.00131.99 ATOM 144 C LYS H 155 -7.522 75.040-108.696 1.00137.04 ATOM 145 O LYS H 155 -6.860 75.801-109.455 1.00130.16 ATOM 146 CB LYS H 155 -8.698 74.396-110.815 1.00127.85 ATOM 147 CG LYS H 155 -9.723 73.561-111.566 1.00127.80 ATOM 148 CD LYS H 155 -10.940 74.351-112.046 1.00127.24 ATOM 149 CE LYS H 155 -12.218 73.544-112.178 1.00127.22 ATOM 150 NZ LYS H 155 -12.505 72.695-110.999 1.00130.77 ATOM 151 N MET H 156 -7.456 75.086-107.351 1.00147.38 ATOM 152 CA MET H 156 -6.532 76.023-106.646 1.00155.86 ATOM 153 C MET H 156 -5.139 75.392-106.577 1.00167.71 ATOM 154 O MET H 156 -4.158 76.157-106.500 1.00177.54 ATOM 155 CB MET H 156 -7.057 76.430-105.266 1.00149.33 ATOM 156 CG MET H 156 -8.313 77.301-105.395 1.00145.12 ATOM 157 SD MET H 156 -9.105 77.782-103.852 1.00145.73 ATOM 158 CE MET H 156 -10.347 78.881-104.525 1.00137.14 ATOM 159 N ASN H 157 -5.063 74.058-106.569 1.00170.29 ATOM 160 CA ASN H 157 -3.800 73.256-106.604 1.00165.72 ATOM 161 C ASN H 157 -2.865 73.697-105.467 1.00155.35 ATOM 162 O ASN H 157 -1.643 73.749-105.708 1.00147.10 ATOM 163 CB ASN H 157 -3.123 73.319-107.982 1.00168.51 ATOM 164 CG ASN H 157 -3.453 72.134-108.864 1.00171.97 ATOM 165 OD1 ASN H 157 -2.628 71.239-109.026 1.00179.44 ATOM 166 ND2 ASN H 157 -4.648 72.111-109.438 1.00171.03 ATOM 167 N LEU H 164 -10.222 63.695 -98.620 1.00163.06 ATOM 168 CA LEU H 164 -10.609 62.271 -98.680 1.00163.84 ATOM 169 C LEU H 164 -12.027 62.147 -98.158 1.00166.31 ATOM 170 O LEU H 164 -12.388 62.786 -97.161 1.00196.05 ATOM 171 CB LEU H 164 -9.655 61.411 -97.830 1.00162.78 ATOM 172 CG LEU H 164 -9.598 59.873 -98.008 1.00155.80 ATOM 173 CD1 LEU H 164 -10.464 59.123 -96.991 1.00148.37 ATOM 174 CD2 LEU H 164 -9.861 59.347 -99.420 1.00152.01 ATOM 175 N PRO H 165 -12.852 61.331 -98.845 1.00149.88 ATOM 176 CA PRO H 165 -14.204 61.057 -98.396 1.00150.26 ATOM 177 C PRO H 165 -14.224 60.329 -97.053 1.00151.52 ATOM 178 O PRO H 165 -13.432 59.461 -96.828 1.00146.30 ATOM 179 CB PRO H 165 -14.827 60.224 -99.523 1.00142.28 ATOM 180 CG PRO H 165 -13.643 59.612-100.240 1.00137.31 ATOM 181 CD PRO H 165 -12.546 60.641-100.105 1.00136.70 ATOM 182 N GLU H 166 -15.180 60.728 -96.219 1.00145.03 ATOM 183 CA GLU H 166 -15.479 60.011 -94.963 1.00133.45 ATOM 184 C GLU H 166 -16.966 60.142 -94.665 1.00123.18 ATOM 185 O GLU H 166 -17.547 61.242 -94.875 1.00130.10 ATOM 186 CB GLU H 166 -14.697 60.554 -93.761 1.00133.40 ATOM 187 CG GLU H 166 -14.391 62.039 -93.855 1.00139.77 ATOM 188 CD GLU H 166 -14.348 62.728 -92.486 1.00145.66 ATOM 189 OE1 GLU H 166 -14.012 62.054 -91.474 1.00144.48 ATOM 190 OE2 GLU H 166 -14.679 63.929 -92.432 1.00153.75 TER