HEADER HYDROLASE 31-DEC-69 7OK9 TITLE Crystal structure of Penicillin-Binding Protein 1 (PBP1) from TITLE 2 Staphylococcus aureus in complex with pentaglycine COMPND MOL_ID: 1; COMPND 2 MOLECULE: Penicillin-binding protein 1; COMPND 3 CHAIN: A, B, C, D, E, F, G, H, I, J, K, L; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 3.36 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN K 85 REMARK 465 ASP K 86 REMARK 465 LYS K 87 REMARK 465 LEU K 88 REMARK 465 LYS K 89 REMARK 465 ILE K 90 REMARK 465 GLU K 91 REMARK 465 LYS K 92 REMARK 465 MET K 93 REMARK 465 ASN K 94 REMARK 465 LEU K 95 REMARK 465 PRO K 96 DBREF 7OK9 K 65 713 UNP A0A0H2WV A0A0H2WVW5_ 65 713 SEQRES 1 K 7 ARG TYR LYS LEU VAL ALA VAL SEQRES 1 K 31 ILE GLU PHE GLY ARG LYS GLY THR ASN LEU THR TYR GLN SEQRES 2 K 31 ASP LYS LEU LYS ILE GLU LYS MET ASN LEU PRO GLY ILE SEQRES 3 K 31 SER LEU LEU PRO GLU ATOM 1 N ARG K 82 -27.007 78.057 -22.299 1.00164.98 ATOM 2 CA ARG K 82 -25.573 77.821 -21.996 1.00172.50 ATOM 3 C ARG K 82 -25.348 76.358 -22.316 1.00174.48 ATOM 4 O ARG K 82 -26.211 75.723 -22.866 1.00185.31 ATOM 5 CB ARG K 82 -25.239 78.165 -20.529 1.00176.69 ATOM 6 CG ARG K 82 -25.239 79.662 -20.233 1.00174.07 ATOM 7 CD ARG K 82 -23.849 80.230 -19.994 1.00169.59 ATOM 8 NE ARG K 82 -23.835 81.517 -19.310 1.00158.34 ATOM 9 CZ ARG K 82 -24.099 82.697 -19.867 1.00151.79 ATOM 10 NH1 ARG K 82 -24.448 82.791 -21.140 1.00152.85 ATOM 11 NH2 ARG K 82 -24.020 83.793 -19.134 1.00148.10 ATOM 12 N TYR K 83 -24.170 75.821 -21.996 1.00167.02 ATOM 13 CA TYR K 83 -23.849 74.415 -22.359 1.00161.88 ATOM 14 C TYR K 83 -23.095 73.722 -21.250 1.00175.53 ATOM 15 O TYR K 83 -22.459 74.333 -20.337 1.00183.86 ATOM 16 CB TYR K 83 -23.044 74.362 -23.657 1.00144.17 ATOM 17 CG TYR K 83 -23.767 74.997 -24.815 1.00129.79 ATOM 18 CD1 TYR K 83 -24.701 74.298 -25.561 1.00115.52 ATOM 19 CD2 TYR K 83 -23.567 76.336 -25.109 1.00126.26 ATOM 20 CE1 TYR K 83 -25.386 74.900 -26.603 1.00107.91 ATOM 21 CE2 TYR K 83 -24.224 76.948 -26.162 1.00117.70 ATOM 22 CZ TYR K 83 -25.136 76.227 -26.913 1.00108.58 ATOM 23 OH TYR K 83 -25.784 76.833 -27.949 1.00102.51 ATOM 24 N LYS K 84 -23.106 72.415 -21.337 1.00185.88 ATOM 25 CA LYS K 84 -22.524 71.517 -20.321 1.00193.80 ATOM 26 C LYS K 84 -21.615 70.507 -20.985 1.00206.31 ATOM 27 O LYS K 84 -21.982 69.919 -22.019 1.00205.15 ATOM 28 CB LYS K 84 -23.626 70.865 -19.497 1.00186.89 ATOM 29 CG LYS K 84 -23.239 69.577 -18.791 1.00177.85 ATOM 30 CD LYS K 84 -24.041 69.364 -17.524 1.00171.75 ATOM 31 CE LYS K 84 -25.540 69.216 -17.732 1.00172.15 ATOM 32 NZ LYS K 84 -26.317 69.971 -16.717 1.00171.47 ATOM 33 N LEU K 85 -20.445 70.292 -20.398 1.00217.76 ATOM 34 CA LEU K 85 -19.442 69.358 -20.982 1.00224.74 ATOM 35 C LEU K 85 -19.745 67.925 -20.557 1.00226.56 ATOM 36 O LEU K 85 -19.907 67.709 -19.351 1.00230.74 ATOM 37 CB LEU K 85 -18.043 69.798 -20.548 1.00224.38 ATOM 38 CG LEU K 85 -16.878 69.104 -21.262 1.00218.15 ATOM 39 CD1 LEU K 85 -16.992 69.175 -22.784 1.00213.81 ATOM 40 CD2 LEU K 85 -15.557 69.704 -20.821 1.00214.15 ATOM 41 N VAL K 86 -19.804 67.006 -21.516 1.00224.22 ATOM 42 CA VAL K 86 -20.068 65.570 -21.219 1.00210.05 ATOM 43 C VAL K 86 -19.039 64.685 -21.902 1.00186.24 ATOM 44 O VAL K 86 -18.630 65.025 -23.029 1.00146.92 ATOM 45 CB VAL K 86 -21.500 65.157 -21.615 1.00222.95 ATOM 46 CG1 VAL K 86 -22.160 64.321 -20.519 1.00222.63 ATOM 47 CG2 VAL K 86 -22.406 66.320 -22.005 1.00229.86 ATOM 48 N ALA K 87 -18.704 63.554 -21.292 1.00182.33 ATOM 49 CA ALA K 87 -17.766 62.583 -21.879 1.00180.48 ATOM 50 C ALA K 87 -18.235 61.162 -21.586 1.00177.40 ATOM 51 O ALA K 87 -18.050 60.711 -20.446 1.00195.16 ATOM 52 CB ALA K 87 -16.377 62.828 -21.309 1.00182.39 ATOM 53 N VAL K 88 -18.785 60.480 -22.585 1.00164.86 ATOM 54 CA VAL K 88 -19.269 59.087 -22.408 1.00174.90 ATOM 55 C VAL K 88 -18.186 58.121 -22.894 1.00216.85 ATOM 56 O VAL K 88 -17.761 58.253 -24.069 1.00256.26 ATOM 57 CB VAL K 88 -20.615 58.851 -23.099 1.00147.95 ATOM 58 CG1 VAL K 88 -21.183 57.481 -22.754 1.00141.57 ATOM 59 CG2 VAL K 88 -21.626 59.941 -22.810 1.00132.69 TER ATOM 1 N ILE K 136 -19.601 61.244 -17.933 1.00205.98 ATOM 2 CA ILE K 136 -19.201 62.018 -16.712 1.00204.81 ATOM 3 C ILE K 136 -19.375 63.525 -16.925 1.00208.26 ATOM 4 O ILE K 136 -19.297 64.010 -18.060 1.00198.32 ATOM 5 CB ILE K 136 -17.781 61.647 -16.226 1.00203.12 ATOM 6 CG1 ILE K 136 -16.698 61.760 -17.306 1.00211.29 ATOM 7 CG2 ILE K 136 -17.788 60.261 -15.584 1.00194.39 ATOM 8 CD1 ILE K 136 -16.058 63.124 -17.397 1.00210.75 ATOM 9 N GLU K 137 -19.644 64.226 -15.821 1.00215.62 ATOM 10 CA GLU K 137 -19.716 65.702 -15.776 1.00216.28 ATOM 11 C GLU K 137 -18.494 66.250 -15.048 1.00205.59 ATOM 12 O GLU K 137 -17.725 65.509 -14.408 1.00197.06 ATOM 13 CB GLU K 137 -20.972 66.172 -15.025 1.00223.12 ATOM 14 CG GLU K 137 -22.009 66.875 -15.890 1.00230.70 ATOM 15 CD GLU K 137 -22.965 65.935 -16.600 1.00241.40 ATOM 16 OE1 GLU K 137 -24.162 66.275 -16.695 1.00248.24 ATOM 17 OE2 GLU K 137 -22.519 64.870 -17.055 1.00255.91 ATOM 18 N PHE K 138 -18.388 67.568 -15.062 1.00199.78 ATOM 19 CA PHE K 138 -17.219 68.302 -14.512 1.00194.41 ATOM 20 C PHE K 138 -17.591 69.350 -13.452 1.00194.62 ATOM 21 O PHE K 138 -17.092 70.523 -13.457 1.00185.21 ATOM 22 CB PHE K 138 -16.435 68.910 -15.674 1.00191.14 ATOM 23 CG PHE K 138 -15.996 67.900 -16.700 1.00189.61 ATOM 24 CD1 PHE K 138 -16.852 67.495 -17.714 1.00185.21 ATOM 25 CD2 PHE K 138 -14.733 67.334 -16.635 1.00192.77 ATOM 26 CE1 PHE K 138 -16.448 66.552 -18.647 1.00183.26 ATOM 27 CE2 PHE K 138 -14.324 66.405 -17.580 1.00197.66 ATOM 28 CZ PHE K 138 -15.185 66.011 -18.580 1.00191.04 ATOM 29 N GLY K 139 -18.363 68.926 -12.451 1.00201.09 ATOM 30 CA GLY K 139 -18.749 69.802 -11.320 1.00204.66 ATOM 31 C GLY K 139 -19.377 71.126 -11.760 1.00208.51 ATOM 32 O GLY K 139 -20.187 71.077 -12.706 1.00214.18 ATOM 33 N ARG K 140 -19.064 72.258 -11.091 1.00213.43 ATOM 34 CA ARG K 140 -19.567 73.604 -11.506 1.00214.82 ATOM 35 C ARG K 140 -18.903 74.087 -12.821 1.00213.91 ATOM 36 O ARG K 140 -19.526 74.806 -13.627 1.00237.93 ATOM 37 CB ARG K 140 -19.395 74.610 -10.355 1.00214.54 ATOM 38 CG ARG K 140 -17.988 74.728 -9.780 1.00214.55 ATOM 39 CD ARG K 140 -17.799 74.186 -8.384 1.00220.99 ATOM 40 NE ARG K 140 -17.176 72.865 -8.370 1.00233.52 ATOM 41 CZ ARG K 140 -17.777 71.714 -8.058 1.00247.50 ATOM 42 NH1 ARG K 140 -19.068 71.684 -7.765 1.00255.93 ATOM 43 NH2 ARG K 140 -17.089 70.583 -8.081 1.00253.31 ATOM 44 N LYS K 141 -17.658 73.671 -13.059 1.00203.88 ATOM 45 CA LYS K 141 -16.827 74.162 -14.197 1.00197.38 ATOM 46 C LYS K 141 -17.365 73.609 -15.515 1.00192.17 ATOM 47 O LYS K 141 -17.153 74.239 -16.571 1.00200.82 ATOM 48 CB LYS K 141 -15.365 73.754 -13.992 1.00195.53 ATOM 49 CG LYS K 141 -14.757 74.333 -12.716 1.00192.66 ATOM 50 CD LYS K 141 -14.243 75.792 -12.795 1.00188.49 ATOM 51 CE LYS K 141 -14.712 76.719 -11.677 1.00183.12 ATOM 52 NZ LYS K 141 -14.184 76.342 -10.344 1.00182.76 ATOM 53 N GLY K 142 -17.951 72.424 -15.449 1.00182.32 ATOM 54 CA GLY K 142 -18.545 71.686 -16.586 1.00178.68 ATOM 55 C GLY K 142 -19.986 72.078 -16.894 1.00182.52 ATOM 56 O GLY K 142 -20.778 71.226 -17.416 1.00170.32 ATOM 57 N THR K 143 -20.327 73.325 -16.536 1.00197.22 ATOM 58 CA THR K 143 -21.697 73.881 -16.709 1.00203.10 ATOM 59 C THR K 143 -21.564 75.366 -17.032 1.00194.50 ATOM 60 O THR K 143 -20.457 75.930 -16.857 1.00191.04 ATOM 61 CB THR K 143 -22.509 73.697 -15.414 1.00208.11 ATOM 62 OG1 THR K 143 -22.160 72.441 -14.811 1.00218.91 ATOM 63 CG2 THR K 143 -24.014 73.785 -15.610 1.00208.22 ATOM 64 N ASN K 144 -22.644 75.994 -17.494 1.00185.63 ATOM 65 CA ASN K 144 -22.706 77.461 -17.675 1.00178.80 ATOM 66 C ASN K 144 -21.592 77.851 -18.641 1.00181.84 ATOM 67 O ASN K 144 -20.922 78.945 -18.486 1.00194.98 ATOM 68 CB ASN K 144 -22.595 78.230 -16.344 1.00167.59 ATOM 69 CG ASN K 144 -23.931 78.628 -15.762 1.00165.85 ATOM 70 OD1 ASN K 144 -24.665 77.775 -15.269 1.00159.47 ATOM 71 ND2 ASN K 144 -24.279 79.904 -15.825 1.00169.82 ATOM 72 N LEU K 145 -21.418 77.025 -19.661 1.00176.86 ATOM 73 CA LEU K 145 -20.438 77.332 -20.737 1.00171.58 ATOM 74 C LEU K 145 -21.102 78.134 -21.846 1.00163.40 ATOM 75 O LEU K 145 -22.198 77.768 -22.286 1.00152.42 ATOM 76 CB LEU K 145 -19.856 76.014 -21.259 1.00178.75 ATOM 77 CG LEU K 145 -19.284 75.085 -20.184 1.00185.89 ATOM 78 CD1 LEU K 145 -19.077 73.678 -20.721 1.00186.49 ATOM 79 CD2 LEU K 145 -17.980 75.648 -19.643 1.00191.50 ATOM 80 N THR K 146 -20.458 79.237 -22.242 1.00163.79 ATOM 81 CA THR K 146 -21.003 80.132 -23.285 1.00166.59 ATOM 82 C THR K 146 -20.793 79.513 -24.660 1.00177.95 ATOM 83 O THR K 146 -19.997 78.563 -24.774 1.00201.66 ATOM 84 CB THR K 146 -20.359 81.523 -23.224 1.00162.70 ATOM 85 OG1 THR K 146 -18.983 81.436 -23.613 1.00160.45 ATOM 86 CG2 THR K 146 -20.372 82.141 -21.837 1.00158.70 ATOM 87 N TYR K 147 -21.439 80.067 -25.672 1.00190.14 ATOM 88 CA TYR K 147 -21.281 79.581 -27.055 1.00202.92 ATOM 89 C TYR K 147 -19.863 79.854 -27.535 1.00227.59 ATOM 90 O TYR K 147 -19.277 79.064 -28.349 1.00262.64 ATOM 91 CB TYR K 147 -22.298 80.184 -28.014 1.00189.75 ATOM 92 CG TYR K 147 -22.248 79.567 -29.388 1.00182.14 ATOM 93 CD1 TYR K 147 -22.446 78.205 -29.578 1.00180.68 ATOM 94 CD2 TYR K 147 -22.039 80.350 -30.510 1.00176.13 ATOM 95 CE1 TYR K 147 -22.434 77.637 -30.837 1.00184.20 ATOM 96 CE2 TYR K 147 -22.007 79.793 -31.783 1.00182.28 ATOM 97 CZ TYR K 147 -22.209 78.432 -31.945 1.00188.30 ATOM 98 OH TYR K 147 -22.188 77.876 -33.192 1.00204.90 ATOM 99 N GLY K 160 -14.503 61.630 -27.444 1.00192.78 ATOM 100 CA GLY K 160 -15.311 61.689 -26.205 1.00188.24 ATOM 101 C GLY K 160 -15.647 63.099 -25.769 1.00183.16 ATOM 102 O GLY K 160 -15.476 63.412 -24.566 1.00178.72 ATOM 103 N ILE K 161 -16.085 63.935 -26.703 1.00184.67 ATOM 104 CA ILE K 161 -16.415 65.362 -26.401 1.00179.62 ATOM 105 C ILE K 161 -17.847 65.670 -26.802 1.00176.86 ATOM 106 O ILE K 161 -18.230 65.329 -27.950 1.00170.34 ATOM 107 CB ILE K 161 -15.397 66.319 -27.068 1.00178.23 ATOM 108 CG1 ILE K 161 -14.115 66.464 -26.247 1.00179.41 ATOM 109 CG2 ILE K 161 -16.026 67.650 -27.388 1.00178.09 ATOM 110 CD1 ILE K 161 -14.319 66.911 -24.813 1.00173.56 ATOM 111 N SER K 162 -18.626 66.250 -25.894 1.00180.03 ATOM 112 CA SER K 162 -20.017 66.662 -26.225 1.00179.47 ATOM 113 C SER K 162 -20.472 67.793 -25.310 1.00184.92 ATOM 114 O SER K 162 -20.157 67.753 -24.111 1.00192.54 ATOM 115 CB SER K 162 -20.962 65.472 -26.152 1.00176.53 ATOM 116 OG SER K 162 -20.572 64.583 -25.096 1.00177.56 ATOM 117 N LEU K 163 -21.182 68.775 -25.875 1.00176.35 ATOM 118 CA LEU K 163 -21.769 69.862 -25.074 1.00170.27 ATOM 119 C LEU K 163 -23.264 69.843 -25.283 1.00171.43 ATOM 120 O LEU K 163 -23.677 69.891 -26.458 1.00157.62 ATOM 121 CB LEU K 163 -21.146 71.185 -25.525 1.00158.73 ATOM 122 CG LEU K 163 -19.622 71.250 -25.397 1.00148.77 ATOM 123 CD1 LEU K 163 -18.998 72.088 -26.498 1.00145.37 ATOM 124 CD2 LEU K 163 -19.211 71.796 -24.047 1.00142.00 ATOM 125 N LEU K 164 -24.044 69.732 -24.213 1.00174.14 ATOM 126 CA LEU K 164 -25.510 69.718 -24.333 1.00164.98 ATOM 127 C LEU K 164 -26.025 71.084 -23.917 1.00171.02 ATOM 128 O LEU K 164 -25.564 71.633 -22.921 1.00185.03 ATOM 129 CB LEU K 164 -26.108 68.607 -23.452 1.00150.24 ATOM 130 CG LEU K 164 -27.528 68.111 -23.776 1.00135.05 ATOM 131 CD1 LEU K 164 -27.692 66.613 -23.524 1.00130.04 ATOM 132 CD2 LEU K 164 -28.545 68.876 -22.962 1.00131.84 ATOM 133 N PRO K 165 -27.007 71.618 -24.672 1.00159.43 ATOM 134 CA PRO K 165 -27.654 72.865 -24.313 1.00160.42 ATOM 135 C PRO K 165 -28.422 72.749 -23.001 1.00162.96 ATOM 136 O PRO K 165 -29.055 71.734 -22.753 1.00162.44 ATOM 137 CB PRO K 165 -28.593 73.163 -25.495 1.00149.78 ATOM 138 CG PRO K 165 -28.812 71.830 -26.164 1.00144.55 ATOM 139 CD PRO K 165 -27.538 71.051 -25.926 1.00145.56 ATOM 140 N GLU K 166 -28.352 73.805 -22.205 1.00155.88 ATOM 141 CA GLU K 166 -29.159 73.917 -20.976 1.00151.27 ATOM 142 C GLU K 166 -29.499 75.380 -20.723 1.00147.02 ATOM 143 O GLU K 166 -28.632 76.259 -20.936 1.00160.23 ATOM 144 CB GLU K 166 -28.440 73.363 -19.735 1.00152.30 ATOM 145 CG GLU K 166 -26.933 73.539 -19.793 1.00159.05 ATOM 146 CD GLU K 166 -26.299 73.712 -18.417 1.00166.42 ATOM 147 OE1 GLU K 166 -26.849 73.190 -17.420 1.00170.82 ATOM 148 OE2 GLU K 166 -25.262 74.381 -18.348 1.00181.09 TER