HEADER RIBOSOME 31-DEC-69 7OYC TITLE Cryo-EM structure of the Xenopus egg 80S ribosome COMPND MOL_ID: 76; COMPND 2 MOLECULE: Rpl41; COMPND 3 CHAIN: n1; EXPDTA ELECTRON MICROSCOPY DBREF 7OYC n 1 25 PDB 7OYC 7OYC 1 25 SEQRES 1 n1 24 ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU LYS SEQRES 2 n1 24 ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N ARG n 2 244.309 274.747 301.281 1.00 38.39 ATOM 2 CA ARG n 2 243.549 273.792 302.077 1.00 38.39 ATOM 3 C ARG n 2 244.344 272.507 302.264 1.00 38.39 ATOM 4 O ARG n 2 245.034 272.058 301.351 1.00 38.39 ATOM 5 CB ARG n 2 242.199 273.498 301.419 1.00 38.39 ATOM 6 CG ARG n 2 241.296 272.575 302.218 1.00 38.39 ATOM 7 CD ARG n 2 239.899 272.524 301.623 1.00 38.39 ATOM 8 NE ARG n 2 239.025 271.605 302.344 1.00 38.39 ATOM 9 CZ ARG n 2 237.744 271.409 302.050 1.00 38.39 ATOM 10 NH1 ARG n 2 237.023 270.552 302.759 1.00 38.39 ATOM 11 NH2 ARG n 2 237.185 272.069 301.048 1.00 38.39 ATOM 12 N ALA n 3 244.248 271.921 303.459 1.00 37.44 ATOM 13 CA ALA n 3 245.001 270.709 303.754 1.00 37.44 ATOM 14 C ALA n 3 244.478 269.498 302.994 1.00 37.44 ATOM 15 O ALA n 3 245.225 268.533 302.807 1.00 37.44 ATOM 16 CB ALA n 3 244.980 270.427 305.256 1.00 37.44 ATOM 17 N LYS n 4 243.220 269.522 302.553 1.00 36.97 ATOM 18 CA LYS n 4 242.693 268.393 301.797 1.00 36.97 ATOM 19 C LYS n 4 243.075 268.481 300.325 1.00 36.97 ATOM 20 O LYS n 4 243.394 267.461 299.704 1.00 36.97 ATOM 21 CB LYS n 4 241.175 268.310 301.949 1.00 36.97 ATOM 22 CG LYS n 4 240.575 267.056 301.342 1.00 36.97 ATOM 23 CD LYS n 4 239.127 266.865 301.753 1.00 36.97 ATOM 24 CE LYS n 4 238.232 267.912 301.129 1.00 36.97 ATOM 25 NZ LYS n 4 236.799 267.615 301.385 1.00 36.97 ATOM 26 N TRP n 5 243.050 269.685 299.748 1.00 38.56 ATOM 27 CA TRP n 5 243.478 269.831 298.362 1.00 38.56 ATOM 28 C TRP n 5 244.990 269.720 298.233 1.00 38.56 ATOM 29 O TRP n 5 245.491 269.292 297.187 1.00 38.56 ATOM 30 CB TRP n 5 242.987 271.157 297.783 1.00 38.56 ATOM 31 CG TRP n 5 241.511 271.428 297.955 1.00 38.56 ATOM 32 CD1 TRP n 5 240.937 272.635 298.223 1.00 38.56 ATOM 33 CD2 TRP n 5 240.430 270.484 297.868 1.00 38.56 ATOM 34 NE1 TRP n 5 239.574 272.506 298.308 1.00 38.56 ATOM 35 CE2 TRP n 5 239.237 271.197 298.096 1.00 38.56 ATOM 36 CE3 TRP n 5 240.354 269.110 297.621 1.00 38.56 ATOM 37 CZ2 TRP n 5 237.989 270.584 298.086 1.00 38.56 ATOM 38 CZ3 TRP n 5 239.115 268.505 297.614 1.00 38.56 ATOM 39 CH2 TRP n 5 237.949 269.240 297.846 1.00 38.56 ATOM 40 N ARG n 6 245.732 270.103 299.273 1.00 37.95 ATOM 41 CA ARG n 6 247.164 269.835 299.283 1.00 37.95 ATOM 42 C ARG n 6 247.433 268.338 299.346 1.00 37.95 ATOM 43 O ARG n 6 248.374 267.840 298.718 1.00 37.95 ATOM 44 CB ARG n 6 247.828 270.548 300.458 1.00 37.95 ATOM 45 CG ARG n 6 249.300 270.221 300.609 1.00 37.95 ATOM 46 CD ARG n 6 249.851 270.707 301.933 1.00 37.95 ATOM 47 NE ARG n 6 251.158 270.119 302.208 1.00 37.95 ATOM 48 CZ ARG n 6 251.849 270.320 303.324 1.00 37.95 ATOM 49 NH1 ARG n 6 253.029 269.738 303.485 1.00 37.95 ATOM 50 NH2 ARG n 6 251.362 271.100 304.279 1.00 37.95 ATOM 51 N LYS n 7 246.613 267.607 300.103 1.00 35.30 ATOM 52 CA LYS n 7 246.704 266.153 300.111 1.00 35.30 ATOM 53 C LYS n 7 246.345 265.567 298.752 1.00 35.30 ATOM 54 O LYS n 7 246.929 264.560 298.337 1.00 35.30 ATOM 55 CB LYS n 7 245.791 265.586 301.198 1.00 35.30 ATOM 56 CG LYS n 7 245.775 264.073 301.292 1.00 35.30 ATOM 57 CD LYS n 7 244.860 263.616 302.413 1.00 35.30 ATOM 58 CE LYS n 7 244.890 262.108 302.571 1.00 35.30 ATOM 59 NZ LYS n 7 244.054 261.653 303.715 1.00 35.30 ATOM 60 N LYS n 8 245.395 266.185 298.047 1.00 36.27 ATOM 61 CA LYS n 8 245.033 265.711 296.716 1.00 36.27 ATOM 62 C LYS n 8 246.143 265.993 295.713 1.00 36.27 ATOM 63 O LYS n 8 246.431 265.159 294.848 1.00 36.27 ATOM 64 CB LYS n 8 243.724 266.361 296.271 1.00 36.27 ATOM 65 CG LYS n 8 243.036 265.660 295.116 1.00 36.27 ATOM 66 CD LYS n 8 241.721 266.341 294.775 1.00 36.27 ATOM 67 CE LYS n 8 240.889 265.494 293.833 1.00 36.27 ATOM 68 NZ LYS n 8 240.514 264.196 294.454 1.00 36.27 ATOM 69 N ARG n 9 246.775 267.166 295.809 1.00 37.96 ATOM 70 CA ARG n 9 247.910 267.463 294.944 1.00 37.96 ATOM 71 C ARG n 9 249.079 266.531 295.218 1.00 37.96 ATOM 72 O ARG n 9 249.857 266.227 294.307 1.00 37.96 ATOM 73 CB ARG n 9 248.348 268.916 295.124 1.00 37.96 ATOM 74 CG ARG n 9 247.481 269.926 294.400 1.00 37.96 ATOM 75 CD ARG n 9 247.973 271.337 294.663 1.00 37.96 ATOM 76 NE ARG n 9 249.422 271.438 294.526 1.00 37.96 ATOM 77 CZ ARG n 9 250.110 272.564 294.680 1.00 37.96 ATOM 78 NH1 ARG n 9 251.427 272.563 294.539 1.00 37.96 ATOM 79 NH2 ARG n 9 249.479 273.692 294.973 1.00 37.96 ATOM 80 N MET n 10 249.223 266.072 296.461 1.00 37.89 ATOM 81 CA MET n 10 250.300 265.144 296.785 1.00 37.89 ATOM 82 C MET n 10 250.067 263.792 296.126 1.00 37.89 ATOM 83 O MET n 10 250.975 263.226 295.508 1.00 37.89 ATOM 84 CB MET n 10 250.424 264.993 298.300 1.00 37.89 ATOM 85 CG MET n 10 251.655 264.228 298.747 1.00 37.89 ATOM 86 SD MET n 10 253.180 265.145 298.465 1.00 37.89 ATOM 87 CE MET n 10 252.908 266.578 299.503 1.00 37.89 ATOM 88 N ARG n 11 248.846 263.263 296.237 1.00 36.27 ATOM 89 CA ARG n 11 248.541 261.971 295.633 1.00 36.27 ATOM 90 C ARG n 11 248.590 262.033 294.113 1.00 36.27 ATOM 91 O ARG n 11 248.932 261.038 293.466 1.00 36.27 ATOM 92 CB ARG n 11 247.175 261.480 296.108 1.00 36.27 ATOM 93 CG ARG n 11 247.139 261.140 297.586 1.00 36.27 ATOM 94 CD ARG n 11 245.788 260.599 298.004 1.00 36.27 ATOM 95 NE ARG n 11 245.815 260.081 299.368 1.00 36.27 ATOM 96 CZ ARG n 11 244.771 259.531 299.978 1.00 36.27 ATOM 97 NH1 ARG n 11 244.887 259.083 301.220 1.00 36.27 ATOM 98 NH2 ARG n 11 243.611 259.427 299.345 1.00 36.27 ATOM 99 N ARG n 12 248.254 263.184 293.526 1.00 38.46 ATOM 100 CA ARG n 12 248.440 263.360 292.092 1.00 38.46 ATOM 101 C ARG n 12 249.911 263.454 291.718 1.00 38.46 ATOM 102 O ARG n 12 250.264 263.198 290.563 1.00 38.46 ATOM 103 CB ARG n 12 247.699 264.607 291.605 1.00 38.46 ATOM 104 CG ARG n 12 246.320 264.330 291.027 1.00 38.46 ATOM 105 CD ARG n 12 245.346 263.851 292.089 1.00 38.46 ATOM 106 NE ARG n 12 244.075 263.424 291.511 1.00 38.46 ATOM 107 CZ ARG n 12 243.080 264.248 291.199 1.00 38.46 ATOM 108 NH1 ARG n 12 243.205 265.552 291.406 1.00 38.46 ATOM 109 NH2 ARG n 12 241.959 263.769 290.678 1.00 38.46 ATOM 110 N LEU n 13 250.773 263.812 292.668 1.00 37.89 ATOM 111 CA LEU n 13 252.209 263.841 292.433 1.00 37.89 ATOM 112 C LEU n 13 252.862 262.488 292.671 1.00 37.89 ATOM 113 O LEU n 13 253.817 262.139 291.969 1.00 37.89 ATOM 114 CB LEU n 13 252.865 264.897 293.326 1.00 37.89 ATOM 115 CG LEU n 13 254.380 265.066 293.211 1.00 37.89 ATOM 116 CD1 LEU n 13 254.777 265.372 291.778 1.00 37.89 ATOM 117 CD2 LEU n 13 254.859 266.161 294.148 1.00 37.89 ATOM 118 N LYS n 14 252.370 261.720 293.648 1.00 36.73 ATOM 119 CA LYS n 14 252.875 260.365 293.844 1.00 36.73 ATOM 120 C LYS n 14 252.574 259.493 292.635 1.00 36.73 ATOM 121 O LYS n 14 253.416 258.695 292.208 1.00 36.73 ATOM 122 CB LYS n 14 252.268 259.748 295.104 1.00 36.73 ATOM 123 CG LYS n 14 252.422 260.582 296.363 1.00 36.73 ATOM 124 CD LYS n 14 253.875 260.911 296.638 1.00 36.73 ATOM 125 CE LYS n 14 254.164 262.391 296.432 1.00 36.73 ATOM 126 NZ LYS n 14 255.608 262.702 296.606 1.00 36.73 ATOM 127 N ARG n 15 251.375 259.634 292.069 1.00 37.57 ATOM 128 CA ARG n 15 250.995 258.848 290.904 1.00 37.57 ATOM 129 C ARG n 15 251.838 259.186 289.682 1.00 37.57 ATOM 130 O ARG n 15 251.981 258.343 288.791 1.00 37.57 ATOM 131 CB ARG n 15 249.513 259.060 290.599 1.00 37.57 ATOM 132 CG ARG n 15 248.889 257.975 289.746 1.00 37.57 ATOM 133 CD ARG n 15 247.390 258.173 289.617 1.00 37.57 ATOM 134 NE ARG n 15 246.761 257.087 288.874 1.00 37.57 ATOM 135 CZ ARG n 15 245.465 257.029 288.588 1.00 37.57 ATOM 136 NH1 ARG n 15 244.654 258.000 288.984 1.00 37.57 ATOM 137 NH2 ARG n 15 244.980 256.001 287.906 1.00 37.57 ATOM 138 N LYS n 16 252.402 260.394 289.623 1.00 38.30 ATOM 139 CA LYS n 16 253.268 260.759 288.509 1.00 38.30 ATOM 140 C LYS n 16 254.696 260.274 288.729 1.00 38.30 ATOM 141 O LYS n 16 255.357 259.835 287.782 1.00 38.30 ATOM 142 CB LYS n 16 253.242 262.272 288.298 1.00 38.30 ATOM 143 CG LYS n 16 254.093 262.753 287.138 1.00 38.30 ATOM 144 CD LYS n 16 253.874 264.233 286.872 1.00 38.30 ATOM 145 CE LYS n 16 254.180 265.067 288.103 1.00 38.30 ATOM 146 NZ LYS n 16 253.934 266.515 287.863 1.00 38.30 ATOM 147 N ARG n 17 255.188 260.347 289.968 1.00 36.85 ATOM 148 CA ARG n 17 256.520 259.830 290.263 1.00 36.85 ATOM 149 C ARG n 17 256.587 258.320 290.086 1.00 36.85 ATOM 150 O ARG n 17 257.646 257.785 289.741 1.00 36.85 ATOM 151 CB ARG n 17 256.934 260.211 291.684 1.00 36.85 ATOM 152 CG ARG n 17 257.024 261.703 291.929 1.00 36.85 ATOM 153 CD ARG n 17 257.480 261.998 293.347 1.00 36.85 ATOM 154 NE ARG n 17 257.552 263.432 293.606 1.00 36.85 ATOM 155 CZ ARG n 17 257.995 263.965 294.739 1.00 36.85 ATOM 156 NH1 ARG n 17 258.409 263.184 295.725 1.00 36.85 ATOM 157 NH2 ARG n 17 258.027 265.282 294.887 1.00 36.85 ATOM 158 N ARG n 18 255.477 257.620 290.321 1.00 37.87 ATOM 159 CA ARG n 18 255.460 256.173 290.137 1.00 37.87 ATOM 160 C ARG n 18 255.510 255.806 288.660 1.00 37.87 ATOM 161 O ARG n 18 256.290 254.938 288.252 1.00 37.87 ATOM 162 CB ARG n 18 254.219 255.578 290.800 1.00 37.87 ATOM 163 CG ARG n 18 254.281 255.549 292.315 1.00 37.87 ATOM 164 CD ARG n 18 252.888 255.507 292.910 1.00 37.87 ATOM 165 NE ARG n 18 252.035 254.553 292.212 1.00 37.87 ATOM 166 CZ ARG n 18 250.732 254.421 292.432 1.00 37.87 ATOM 167 NH1 ARG n 18 250.127 255.184 293.332 1.00 37.87 ATOM 168 NH2 ARG n 18 250.034 253.526 291.749 1.00 37.87 ATOM 169 N LYS n 19 254.683 256.459 287.840 1.00 38.04 ATOM 170 CA LYS n 19 254.682 256.170 286.411 1.00 38.04 ATOM 171 C LYS n 19 255.986 256.596 285.751 1.00 38.04 ATOM 172 O LYS n 19 256.437 255.949 284.799 1.00 38.04 ATOM 173 CB LYS n 19 253.492 256.854 285.739 1.00 38.04 ATOM 174 CG LYS n 19 252.145 256.356 286.237 1.00 38.04 ATOM 175 CD LYS n 19 250.996 257.160 285.653 1.00 38.04 ATOM 176 CE LYS n 19 249.663 256.704 286.228 1.00 38.04 ATOM 177 NZ LYS n 19 248.524 257.504 285.701 1.00 38.04 ATOM 178 N MET n 20 256.605 257.673 286.237 1.00 39.82 ATOM 179 CA MET n 20 257.913 258.061 285.724 1.00 39.82 ATOM 180 C MET n 20 258.994 257.085 286.169 1.00 39.82 ATOM 181 O MET n 20 260.016 256.937 285.489 1.00 39.82 ATOM 182 CB MET n 20 258.252 259.482 286.175 1.00 39.82 ATOM 183 CG MET n 20 259.526 260.048 285.571 1.00 39.82 ATOM 184 SD MET n 20 259.874 261.725 286.134 1.00 39.82 ATOM 185 CE MET n 20 259.985 261.474 287.904 1.00 39.82 ATOM 186 N ARG n 21 258.783 256.405 287.296 1.00 37.17 ATOM 187 CA ARG n 21 259.752 255.428 287.778 1.00 37.17 ATOM 188 C ARG n 21 259.577 254.074 287.103 1.00 37.17 ATOM 189 O ARG n 21 260.564 253.360 286.892 1.00 37.17 ATOM 190 CB ARG n 21 259.634 255.287 289.297 1.00 37.17 ATOM 191 CG ARG n 21 260.660 254.371 289.939 1.00 37.17 ATOM 192 CD ARG n 21 260.464 254.323 291.447 1.00 37.17 ATOM 193 NE ARG n 21 261.294 253.304 292.085 1.00 37.17 ATOM 194 CZ ARG n 21 262.514 253.524 292.560 1.00 37.17 ATOM 195 NH1 ARG n 21 263.196 252.538 293.125 1.00 37.17 ATOM 196 NH2 ARG n 21 263.053 254.730 292.469 1.00 37.17 ATOM 197 N GLN n 22 258.342 253.704 286.756 1.00 38.06 ATOM 198 CA GLN n 22 258.107 252.444 286.061 1.00 38.06 ATOM 199 C GLN n 22 258.555 252.493 284.607 1.00 38.06 ATOM 200 O GLN n 22 258.820 251.440 284.018 1.00 38.06 ATOM 201 CB GLN n 22 256.628 252.067 286.134 1.00 38.06 ATOM 202 CG GLN n 22 256.130 251.783 287.540 1.00 38.06 ATOM 203 CD GLN n 22 254.665 251.397 287.573 1.00 38.06 ATOM 204 OE1 GLN n 22 254.072 251.258 288.643 1.00 38.06 ATOM 205 NE2 GLN n 22 254.073 251.220 286.398 1.00 38.06 ATOM 206 N ARG n 23 258.640 253.686 284.015 1.00 37.42 ATOM 207 CA ARG n 23 259.108 253.795 282.638 1.00 37.42 ATOM 208 C ARG n 23 260.573 253.394 282.522 1.00 37.42 ATOM 209 O ARG n 23 260.975 252.761 281.539 1.00 37.42 ATOM 210 CB ARG n 23 258.897 255.219 282.125 1.00 37.42 ATOM 211 CG ARG n 23 259.417 255.457 280.719 1.00 37.42 ATOM 212 CD ARG n 23 259.185 256.891 280.277 1.00 37.42 ATOM 213 NE ARG n 23 259.704 257.134 278.935 1.00 37.42 ATOM 214 CZ ARG n 23 259.630 258.301 278.305 1.00 37.42 ATOM 215 NH1 ARG n 23 260.130 258.430 277.084 1.00 37.42 ATOM 216 NH2 ARG n 23 259.056 259.341 278.895 1.00 37.42 ATOM 217 N SER n 24 261.384 253.749 283.518 1.00 38.88 ATOM 218 CA SER n 24 262.801 253.411 283.545 1.00 38.88 ATOM 219 C SER n 24 263.085 252.186 284.408 1.00 38.88 ATOM 220 O SER n 24 264.184 252.053 284.955 1.00 38.88 ATOM 221 CB SER n 24 263.617 254.606 284.034 1.00 38.88 ATOM 222 OG SER n 24 263.139 255.061 285.287 1.00 38.88 ATOM 223 N LYS n 25 262.112 251.291 284.542 1.00 37.69 ATOM 224 CA LYS n 25 262.283 250.093 285.354 1.00 37.69 ATOM 225 C LYS n 25 262.763 248.921 284.505 1.00 37.69 ATOM 226 O LYS n 25 261.974 248.278 283.812 1.00 37.69 ATOM 227 CB LYS n 25 260.975 249.732 286.060 1.00 37.69 ATOM 228 CG LYS n 25 261.082 248.530 286.984 1.00 37.69 ATOM 229 CD LYS n 25 259.768 248.259 287.698 1.00 37.69 ATOM 230 CE LYS n 25 259.901 247.099 288.671 1.00 37.69 ATOM 231 NZ LYS n 25 258.640 246.850 289.422 1.00 37.69 TER