HEADER TRANSPORT PROTEIN 31-DEC-69 7QBD TITLE TC:CD320 in complex with nanobody TC-Nb26 COMPND MOL_ID: 2; COMPND 2 MOLECULE: CD320 antigen; COMPND 3 CHAIN: C, D; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 4.18 ANGSTORMS DBREF 7QBD D 52 198 UNP Q9NPF0 CD320_HUMAN 52 198 SEQRES 1 D 37 SER CYS PRO PRO THR LYS PHE GLN CYS ARG THR SER GLY SEQRES 2 D 37 LEU CYS VAL PRO LEU THR TRP ARG CYS ASP ARG ASP LEU SEQRES 3 D 37 ASP CYS SER ASP GLY SER ASP GLU GLU GLU CYS SEQRES 1 D 2 LEU ALA ATOM 1 N SER D 53 -31.276 68.209 53.457 1.00249.40 ATOM 2 CA SER D 53 -31.754 66.864 53.727 1.00250.74 ATOM 3 C SER D 53 -31.104 66.241 54.955 1.00253.87 ATOM 4 O SER D 53 -31.204 65.026 55.113 1.00252.95 ATOM 5 CB SER D 53 -31.531 65.939 52.520 1.00246.50 ATOM 6 OG SER D 53 -31.973 64.621 52.815 1.00243.01 ATOM 7 N CYS D 54 -30.368 67.035 55.733 1.00257.63 ATOM 8 CA CYS D 54 -29.660 66.533 56.945 1.00263.30 ATOM 9 C CYS D 54 -29.630 67.685 57.969 1.00268.88 ATOM 10 O CYS D 54 -30.255 68.722 57.666 1.00269.51 ATOM 11 CB CYS D 54 -28.316 65.964 56.512 1.00265.25 ATOM 12 SG CYS D 54 -27.304 67.180 55.644 1.00282.76 ATOM 13 N PRO D 55 -28.951 67.644 59.149 1.00275.51 ATOM 14 CA PRO D 55 -29.125 68.698 60.150 1.00280.03 ATOM 15 C PRO D 55 -28.243 69.933 59.986 1.00280.77 ATOM 16 O PRO D 55 -27.446 70.001 59.050 1.00274.20 ATOM 17 CB PRO D 55 -28.747 67.979 61.464 1.00281.26 ATOM 18 CG PRO D 55 -27.937 66.841 61.105 1.00276.52 ATOM 19 CD PRO D 55 -27.936 66.684 59.632 1.00275.00 ATOM 20 N PRO D 56 -28.363 70.891 60.926 1.00287.51 ATOM 21 CA PRO D 56 -27.432 72.013 60.997 1.00289.19 ATOM 22 C PRO D 56 -26.211 71.610 61.798 1.00290.91 ATOM 23 O PRO D 56 -25.973 70.405 61.916 1.00289.44 ATOM 24 CB PRO D 56 -28.237 73.090 61.713 1.00294.64 ATOM 25 CG PRO D 56 -29.132 72.329 62.611 1.00298.10 ATOM 26 CD PRO D 56 -29.508 71.093 61.841 1.00292.41 ATOM 27 N THR D 57 -25.440 72.595 62.270 1.00292.93 ATOM 28 CA THR D 57 -24.071 72.449 62.805 1.00288.26 ATOM 29 C THR D 57 -23.240 71.574 61.896 1.00279.97 ATOM 30 O THR D 57 -22.343 70.849 62.358 1.00277.05 ATOM 31 CB THR D 57 -24.003 71.896 64.295 1.00290.92 ATOM 32 OG1 THR D 57 -22.654 71.530 64.610 1.00296.75 ATOM 33 CG2 THR D 57 -24.893 70.688 64.566 1.00295.29 ATOM 34 N LYS D 58 -23.559 71.637 60.599 1.00274.62 ATOM 35 CA LYS D 58 -22.938 70.727 59.639 1.00265.38 ATOM 36 C LYS D 58 -23.350 70.852 58.157 1.00265.64 ATOM 37 O LYS D 58 -24.527 71.029 57.826 1.00267.71 ATOM 38 CB LYS D 58 -23.139 69.312 60.137 1.00264.06 ATOM 39 CG LYS D 58 -24.097 68.461 59.405 1.00260.85 ATOM 40 CD LYS D 58 -23.699 67.061 59.761 1.00256.05 ATOM 41 CE LYS D 58 -23.840 66.879 61.280 1.00258.03 ATOM 42 NZ LYS D 58 -22.989 65.738 61.628 1.00252.25 ATOM 43 N PHE D 59 -22.361 70.641 57.267 1.00261.13 ATOM 44 CA PHE D 59 -22.561 70.777 55.793 1.00262.46 ATOM 45 C PHE D 59 -22.991 69.455 55.154 1.00261.62 ATOM 46 O PHE D 59 -22.837 68.427 55.795 1.00263.21 ATOM 47 CB PHE D 59 -21.240 71.240 55.168 1.00259.59 ATOM 48 CG PHE D 59 -21.158 71.277 53.662 1.00260.00 ATOM 49 CD1 PHE D 59 -21.783 72.279 52.939 1.00259.48 ATOM 50 CD2 PHE D 59 -20.451 70.309 52.966 1.00260.60 ATOM 51 CE1 PHE D 59 -21.708 72.307 51.555 1.00257.78 ATOM 52 CE2 PHE D 59 -20.383 70.334 51.583 1.00261.32 ATOM 53 CZ PHE D 59 -21.006 71.337 50.880 1.00259.12 ATOM 54 N GLN D 60 -23.516 69.498 53.927 1.00261.39 ATOM 55 CA GLN D 60 -23.915 68.276 53.198 1.00261.34 ATOM 56 C GLN D 60 -23.449 68.387 51.764 1.00259.48 ATOM 57 O GLN D 60 -23.732 69.417 51.131 1.00259.91 ATOM 58 CB GLN D 60 -25.425 68.210 53.037 1.00261.13 ATOM 59 CG GLN D 60 -25.925 66.998 52.264 1.00259.54 ATOM 60 CD GLN D 60 -27.048 67.366 51.329 1.00259.60 ATOM 61 OE1 GLN D 60 -26.865 68.119 50.376 1.00263.96 ATOM 62 NE2 GLN D 60 -28.229 66.842 51.607 1.00261.77 ATOM 63 N CYS D 61 -22.779 67.362 51.266 1.00262.18 ATOM 64 CA CYS D 61 -22.457 67.411 49.819 1.00266.95 ATOM 65 C CYS D 61 -23.573 66.695 49.069 1.00267.39 ATOM 66 O CYS D 61 -23.786 65.502 49.337 1.00266.77 ATOM 67 CB CYS D 61 -21.158 66.709 49.466 1.00269.75 ATOM 68 SG CYS D 61 -20.254 65.962 50.841 1.00300.31 ATOM 69 N ARG D 62 -24.270 67.428 48.197 1.00266.79 ATOM 70 CA ARG D 62 -25.403 66.847 47.430 1.00261.29 ATOM 71 C ARG D 62 -24.985 65.747 46.447 1.00261.64 ATOM 72 O ARG D 62 -25.720 64.745 46.374 1.00258.65 ATOM 73 CB ARG D 62 -26.135 67.962 46.677 1.00254.27 ATOM 74 N THR D 63 -23.890 65.926 45.696 1.00260.24 ATOM 75 CA THR D 63 -23.580 64.896 44.664 1.00261.57 ATOM 76 C THR D 63 -23.286 63.582 45.362 1.00258.48 ATOM 77 O THR D 63 -23.815 62.541 44.930 1.00261.64 ATOM 78 CB THR D 63 -22.401 65.301 43.777 1.00261.51 ATOM 79 OG1 THR D 63 -22.656 66.612 43.271 1.00265.04 ATOM 80 CG2 THR D 63 -22.160 64.347 42.628 1.00261.26 ATOM 81 N SER D 64 -22.507 63.654 46.432 1.00258.29 ATOM 82 CA SER D 64 -22.290 62.439 47.242 1.00260.75 ATOM 83 C SER D 64 -23.632 62.044 47.844 1.00258.35 ATOM 84 O SER D 64 -23.937 60.841 47.867 1.00251.98 ATOM 85 CB SER D 64 -21.254 62.685 48.293 1.00259.95 ATOM 86 OG SER D 64 -21.753 63.535 49.310 1.00262.76 ATOM 87 N GLY D 65 -24.415 63.039 48.259 1.00259.84 ATOM 88 CA GLY D 65 -25.664 62.746 48.981 1.00259.95 ATOM 89 C GLY D 65 -25.320 62.525 50.439 1.00256.78 ATOM 90 O GLY D 65 -26.053 61.768 51.101 1.00256.91 ATOM 91 N LEU D 66 -24.257 63.173 50.931 1.00255.79 ATOM 92 CA LEU D 66 -23.787 62.894 52.313 1.00251.59 ATOM 93 C LEU D 66 -23.576 64.188 53.091 1.00254.82 ATOM 94 O LEU D 66 -23.194 65.167 52.474 1.00254.32 ATOM 95 CB LEU D 66 -22.476 62.110 52.230 1.00246.94 ATOM 96 CG LEU D 66 -22.612 60.645 51.828 1.00239.42 ATOM 97 CD1 LEU D 66 -21.250 60.034 51.546 1.00231.48 ATOM 98 CD2 LEU D 66 -23.342 59.857 52.903 1.00227.15 ATOM 99 N CYS D 67 -23.732 64.137 54.413 1.00252.36 ATOM 100 CA CYS D 67 -23.606 65.337 55.274 1.00253.74 ATOM 101 C CYS D 67 -22.328 65.210 56.113 1.00247.80 ATOM 102 O CYS D 67 -22.153 64.150 56.735 1.00240.08 ATOM 103 CB CYS D 67 -24.836 65.387 56.170 1.00255.49 ATOM 104 SG CYS D 67 -25.469 67.050 56.510 1.00273.70 ATOM 105 N VAL D 68 -21.462 66.232 56.130 1.00249.23 ATOM 106 CA VAL D 68 -20.142 66.159 56.836 1.00241.64 ATOM 107 C VAL D 68 -19.993 67.294 57.862 1.00246.20 ATOM 108 O VAL D 68 -20.747 68.272 57.753 1.00249.65 ATOM 109 CB VAL D 68 -19.009 66.232 55.802 1.00231.87 ATOM 110 CG1 VAL D 68 -18.972 65.000 54.915 1.00232.60 ATOM 111 CG2 VAL D 68 -19.089 67.494 54.960 1.00240.74 ATOM 112 N PRO D 69 -19.068 67.263 58.856 1.00239.68 ATOM 113 CA PRO D 69 -18.984 68.394 59.807 1.00240.51 ATOM 114 C PRO D 69 -18.490 69.727 59.226 1.00241.10 ATOM 115 O PRO D 69 -17.780 69.727 58.220 1.00235.59 ATOM 116 CB PRO D 69 -17.981 67.895 60.859 1.00230.95 ATOM 117 CG PRO D 69 -17.183 66.866 60.166 1.00228.83 ATOM 118 CD PRO D 69 -18.140 66.182 59.235 1.00232.60 ATOM 119 N LEU D 70 -18.843 70.841 59.872 1.00247.42 ATOM 120 CA LEU D 70 -18.480 72.179 59.385 1.00245.15 ATOM 121 C LEU D 70 -17.025 72.564 59.585 1.00244.57 ATOM 122 O LEU D 70 -16.567 73.563 59.034 1.00242.55 ATOM 123 CB LEU D 70 -19.342 73.254 60.061 1.00248.71 ATOM 124 CG LEU D 70 -20.812 73.383 59.697 1.00252.50 ATOM 125 CD1 LEU D 70 -21.442 74.570 60.390 1.00252.66 ATOM 126 CD2 LEU D 70 -20.879 73.594 58.199 1.00253.15 ATOM 127 N THR D 71 -16.289 71.768 60.349 1.00243.59 ATOM 128 CA THR D 71 -14.862 71.998 60.522 1.00242.98 ATOM 129 C THR D 71 -14.128 71.653 59.227 1.00240.39 ATOM 130 O THR D 71 -12.953 71.977 59.051 1.00236.60 ATOM 131 CB THR D 71 -14.301 71.172 61.699 1.00239.20 ATOM 132 OG1 THR D 71 -15.179 71.291 62.825 1.00234.86 ATOM 133 CG2 THR D 71 -12.909 71.652 62.092 1.00238.48 ATOM 134 N TRP D 72 -14.845 71.005 58.312 1.00239.26 ATOM 135 CA TRP D 72 -14.271 70.538 57.057 1.00239.07 ATOM 136 C TRP D 72 -14.674 71.430 55.884 1.00247.61 ATOM 137 O TRP D 72 -14.211 71.236 54.760 1.00252.13 ATOM 138 CB TRP D 72 -14.705 69.098 56.779 1.00233.40 ATOM 139 CG TRP D 72 -14.279 68.100 57.824 1.00229.92 ATOM 140 CD1 TRP D 72 -13.655 68.362 59.011 1.00230.00 ATOM 141 CD2 TRP D 72 -14.453 66.680 57.769 1.00225.48 ATOM 142 NE1 TRP D 72 -13.435 67.194 59.698 1.00226.84 ATOM 143 CE2 TRP D 72 -13.913 66.146 58.955 1.00224.63 ATOM 144 CE3 TRP D 72 -15.013 65.809 56.832 1.00220.42 ATOM 145 CZ2 TRP D 72 -13.921 64.779 59.229 1.00216.26 ATOM 146 CZ3 TRP D 72 -15.018 64.455 57.104 1.00215.81 ATOM 147 CH2 TRP D 72 -14.475 63.953 58.292 1.00209.29 ATOM 148 N ARG D 73 -15.539 72.403 56.153 1.00249.50 ATOM 149 CA ARG D 73 -16.005 73.329 55.128 1.00254.38 ATOM 150 C ARG D 73 -14.950 74.393 54.913 1.00256.29 ATOM 151 O ARG D 73 -14.676 75.182 55.817 1.00254.31 ATOM 152 CB ARG D 73 -17.337 73.973 55.525 1.00251.73 ATOM 153 N CYS D 74 -14.405 74.407 53.691 1.00259.65 ATOM 154 CA CYS D 74 -13.346 75.378 53.316 1.00261.33 ATOM 155 C CYS D 74 -12.135 75.116 54.199 1.00257.07 ATOM 156 O CYS D 74 -11.769 75.995 54.995 1.00267.44 ATOM 157 CB CYS D 74 -13.827 76.819 53.419 1.00267.55 ATOM 158 SG CYS D 74 -14.736 77.361 51.952 1.00283.55 ATOM 159 N ASP D 75 -11.548 73.937 54.051 1.00251.70 ATOM 160 CA ASP D 75 -10.429 73.600 54.899 1.00251.95 ATOM 161 C ASP D 75 -9.325 72.944 54.082 1.00244.78 ATOM 162 O ASP D 75 -8.495 72.211 54.617 1.00242.62 ATOM 163 CB ASP D 75 -10.900 72.713 56.056 1.00250.38 ATOM 164 CG ASP D 75 -11.050 71.253 55.670 1.00244.94 ATOM 165 OD1 ASP D 75 -11.338 70.952 54.490 1.00246.77 ATOM 166 OD2 ASP D 75 -10.899 70.398 56.570 1.00237.89 ATOM 167 N ARG D 76 -9.355 73.206 52.775 1.00244.70 ATOM 168 CA ARG D 76 -8.324 72.780 51.823 1.00238.87 ATOM 169 C ARG D 76 -8.317 71.275 51.550 1.00234.51 ATOM 170 O ARG D 76 -7.613 70.813 50.654 1.00228.33 ATOM 171 CB ARG D 76 -6.934 73.232 52.297 1.00233.24 ATOM 172 N ASP D 77 -9.093 70.507 52.309 1.00235.12 ATOM 173 CA ASP D 77 -9.177 69.070 52.061 1.00231.33 ATOM 174 C ASP D 77 -10.420 68.705 51.246 1.00232.18 ATOM 175 O ASP D 77 -11.497 69.263 51.452 1.00236.64 ATOM 176 CB ASP D 77 -9.184 68.290 53.379 1.00230.63 ATOM 177 CG ASP D 77 -7.820 68.246 54.048 1.00222.65 ATOM 178 OD1 ASP D 77 -6.814 68.592 53.397 1.00216.56 ATOM 179 OD2 ASP D 77 -7.753 67.851 55.230 1.00219.45 ATOM 180 N LEU D 78 -10.264 67.757 50.328 1.00231.27 ATOM 181 CA LEU D 78 -11.397 67.255 49.556 1.00233.88 ATOM 182 C LEU D 78 -12.059 66.097 50.302 1.00234.30 ATOM 183 O LEU D 78 -11.710 64.930 50.109 1.00230.24 ATOM 184 CB LEU D 78 -10.960 66.808 48.155 1.00231.06 ATOM 185 CG LEU D 78 -10.718 67.860 47.065 1.00228.04 ATOM 186 CD1 LEU D 78 -9.675 68.892 47.462 1.00229.64 ATOM 187 CD2 LEU D 78 -10.324 67.187 45.756 1.00221.28 ATOM 188 N ASP D 79 -13.025 66.435 51.150 1.00236.95 ATOM 189 CA ASP D 79 -13.713 65.446 51.971 1.00239.66 ATOM 190 C ASP D 79 -14.918 64.874 51.236 1.00237.72 ATOM 191 O ASP D 79 -15.326 63.740 51.477 1.00231.02 ATOM 192 CB ASP D 79 -14.145 66.066 53.302 1.00238.50 ATOM 193 CG ASP D 79 -12.967 66.488 54.156 1.00234.40 ATOM 194 OD1 ASP D 79 -12.094 65.637 54.423 1.00230.07 ATOM 195 OD2 ASP D 79 -12.911 67.666 54.566 1.00237.14 ATOM 196 N CYS D 80 -15.482 65.669 50.334 1.00240.93 ATOM 197 CA CYS D 80 -16.593 65.222 49.506 1.00243.38 ATOM 198 C CYS D 80 -16.080 64.680 48.178 1.00241.11 ATOM 199 O CYS D 80 -15.123 65.212 47.612 1.00241.62 ATOM 200 CB CYS D 80 -17.582 66.364 49.266 1.00250.06 ATOM 201 SG CYS D 80 -18.464 66.916 50.746 1.00263.56 ATOM 202 N SER D 81 -16.824 63.747 47.602 1.00240.73 ATOM 203 CA SER D 81 -16.446 63.309 46.240 1.00235.77 ATOM 204 C SER D 81 -16.602 64.506 45.309 1.00236.58 ATOM 205 O SER D 81 -15.723 64.705 44.457 1.00233.92 ATOM 206 CB SER D 81 -17.327 62.187 45.801 1.00229.65 ATOM 207 OG SER D 81 -18.693 62.577 45.810 1.00232.60 ATOM 208 N ASP D 82 -17.658 65.293 45.505 1.00240.40 ATOM 209 CA ASP D 82 -17.967 66.419 44.585 1.00247.61 ATOM 210 C ASP D 82 -17.088 67.632 44.865 1.00251.79 ATOM 211 O ASP D 82 -17.231 68.636 44.145 1.00259.27 ATOM 212 CB ASP D 82 -19.427 66.870 44.672 1.00252.74 ATOM 213 CG ASP D 82 -19.894 67.953 43.714 1.00262.10 ATOM 214 OD1 ASP D 82 -19.060 68.390 42.906 1.00261.76 ATOM 215 OD2 ASP D 82 -21.094 68.287 43.714 1.00262.28 ATOM 216 N GLY D 83 -16.218 67.544 45.859 1.00248.78 ATOM 217 CA GLY D 83 -15.410 68.692 46.226 1.00248.96 ATOM 218 C GLY D 83 -16.225 69.940 46.511 1.00255.73 ATOM 219 O GLY D 83 -15.700 71.050 46.466 1.00256.59 ATOM 220 N SER D 84 -17.510 69.760 46.805 1.00254.23 ATOM 221 CA SER D 84 -18.393 70.887 47.103 1.00258.13 ATOM 222 C SER D 84 -17.974 71.600 48.386 1.00263.74 ATOM 223 O SER D 84 -18.164 72.812 48.523 1.00265.06 ATOM 224 CB SER D 84 -19.847 70.418 47.215 1.00256.44 ATOM 225 OG SER D 84 -19.977 69.370 48.161 1.00258.44 ATOM 226 N ASP D 85 -17.402 70.840 49.320 1.00266.62 ATOM 227 CA ASP D 85 -17.009 71.366 50.627 1.00264.43 ATOM 228 C ASP D 85 -15.947 72.464 50.549 1.00266.13 ATOM 229 O ASP D 85 -15.679 73.144 51.539 1.00262.85 ATOM 230 CB ASP D 85 -16.513 70.230 51.528 1.00262.23 ATOM 231 CG ASP D 85 -15.519 69.317 50.830 1.00253.96 ATOM 232 OD1 ASP D 85 -15.681 69.072 49.617 1.00253.51 ATOM 233 OD2 ASP D 85 -14.576 68.842 51.496 1.00246.82 ATOM 234 N GLU D 86 -15.276 72.528 49.393 1.00265.35 ATOM 235 CA GLU D 86 -14.186 73.516 49.207 1.00264.51 ATOM 236 C GLU D 86 -14.388 74.293 47.917 1.00266.05 ATOM 237 O GLU D 86 -13.579 75.204 47.660 1.00268.06 ATOM 238 CB GLU D 86 -12.857 72.812 48.981 1.00260.52 ATOM 239 CG GLU D 86 -12.623 71.662 49.920 1.00256.54 ATOM 240 CD GLU D 86 -12.435 72.155 51.336 1.00254.67 ATOM 241 OE1 GLU D 86 -11.684 73.115 51.508 1.00251.87 ATOM 242 OE2 GLU D 86 -13.055 71.591 52.245 1.00252.55 ATOM 243 N GLU D 87 -15.430 73.972 47.151 1.00266.83 ATOM 244 CA GLU D 87 -15.583 74.618 45.823 1.00271.28 ATOM 245 C GLU D 87 -15.750 76.129 45.990 1.00271.28 ATOM 246 O GLU D 87 -15.135 76.876 45.204 1.00267.93 ATOM 247 CB GLU D 87 -16.805 74.052 45.104 1.00270.68 ATOM 248 CG GLU D 87 -16.495 73.523 43.718 1.00266.10 ATOM 249 CD GLU D 87 -16.736 72.034 43.547 1.00264.97 ATOM 250 OE1 GLU D 87 -17.896 71.604 43.698 1.00266.85 ATOM 251 OE2 GLU D 87 -15.762 71.307 43.271 1.00259.92 ATOM 252 N GLU D 88 -16.528 76.551 46.986 1.00268.87 ATOM 253 CA GLU D 88 -16.743 77.997 47.220 1.00268.21 ATOM 254 C GLU D 88 -16.195 78.354 48.595 1.00265.07 ATOM 255 O GLU D 88 -16.559 77.668 49.563 1.00271.62 ATOM 256 CB GLU D 88 -18.230 78.322 47.133 1.00273.65 ATOM 257 N CYS D 89 -15.375 79.399 48.662 1.00259.60 ATOM 258 CA CYS D 89 -14.751 79.795 49.945 1.00253.89 ATOM 259 C CYS D 89 -14.700 81.322 50.021 1.00245.07 ATOM 260 O CYS D 89 -14.075 81.918 49.121 1.00235.00 ATOM 261 CB CYS D 89 -13.344 79.224 50.035 1.00255.00 ATOM 262 SG CYS D 89 -13.310 77.478 50.514 1.00265.48 TER ATOM 1 N LEU D 130 8.806 75.266 76.471 1.00217.56 ATOM 2 CA LEU D 130 8.832 73.890 75.994 1.00222.80 ATOM 3 C LEU D 130 10.226 73.530 75.494 1.00226.99 ATOM 4 O LEU D 130 10.781 74.241 74.656 1.00225.96 ATOM 5 CB LEU D 130 7.827 73.691 74.846 1.00218.60 ATOM 6 CG LEU D 130 6.299 73.806 74.963 1.00209.23 ATOM 7 CD1 LEU D 130 5.831 75.036 75.732 1.00197.13 ATOM 8 CD2 LEU D 130 5.689 73.805 73.566 1.00215.89 ATOM 9 N ALA D 131 10.807 72.451 76.009 1.00230.60 ATOM 10 CA ALA D 131 12.088 71.987 75.486 1.00228.55 ATOM 11 C ALA D 131 11.861 70.744 74.634 1.00228.60 ATOM 12 O ALA D 131 10.922 69.988 74.881 1.00226.47 ATOM 13 CB ALA D 131 13.063 71.694 76.616 1.00227.62 ATOM 14 CA CA D 202 -13.044 69.798 53.193 1.00249.09 TER