HEADER RIBOSOME 31-DEC-69 7SYM TITLE Structure of the HCV IRES bound to the 40S ribosomal subunit, head TITLE 2 opening. Structure 7(delta dII) COMPND MOL_ID: 35; COMPND 2 MOLECULE: 60s ribosomal protein l41; COMPND 3 CHAIN: n; EXPDTA ELECTRON MICROSCOPY DBREF 7SYM n 1 25 UNP A0A087WN A0A087WNH4_ 1 25 SEQRES 1 n 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 n 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET n 1 197.906 213.179 193.602 1.00 85.04 ATOM 2 CA MET n 1 198.061 213.839 192.311 1.00 85.04 ATOM 3 C MET n 1 197.106 213.301 191.255 1.00 85.04 ATOM 4 O MET n 1 197.162 212.125 190.896 1.00 85.04 ATOM 5 CB MET n 1 199.498 213.700 191.806 1.00 85.04 ATOM 6 CG MET n 1 199.804 214.563 190.591 1.00 85.04 ATOM 7 SD MET n 1 200.561 216.144 190.995 1.00 85.04 ATOM 8 CE MET n 1 202.018 215.589 191.868 1.00 85.04 ATOM 9 N ARG n 2 196.228 214.170 190.764 1.00 68.56 ATOM 10 CA ARG n 2 195.435 213.844 189.590 1.00 68.56 ATOM 11 C ARG n 2 196.330 213.806 188.355 1.00 68.56 ATOM 12 O ARG n 2 197.367 214.471 188.291 1.00 68.56 ATOM 13 CB ARG n 2 194.301 214.854 189.418 1.00 68.56 ATOM 14 CG ARG n 2 194.760 216.297 189.368 1.00 68.56 ATOM 15 CD ARG n 2 193.586 217.267 189.378 1.00 68.56 ATOM 16 NE ARG n 2 192.803 217.220 188.150 1.00 68.56 ATOM 17 CZ ARG n 2 191.689 217.909 187.947 1.00 68.56 ATOM 18 NH1 ARG n 2 191.213 218.737 188.862 1.00 68.56 ATOM 19 NH2 ARG n 2 191.039 217.769 186.796 1.00 68.56 ATOM 20 N ALA n 3 195.918 213.009 187.366 1.00 67.56 ATOM 21 CA ALA n 3 196.816 212.664 186.267 1.00 67.56 ATOM 22 C ALA n 3 196.995 213.805 185.272 1.00 67.56 ATOM 23 O ALA n 3 197.929 213.766 184.460 1.00 67.56 ATOM 24 CB ALA n 3 196.305 211.416 185.547 1.00 67.56 ATOM 25 N LYS n 4 196.124 214.821 185.321 1.00 67.22 ATOM 26 CA LYS n 4 196.179 215.911 184.348 1.00 67.22 ATOM 27 C LYS n 4 197.442 216.748 184.508 1.00 67.22 ATOM 28 O LYS n 4 198.170 216.985 183.537 1.00 67.22 ATOM 29 CB LYS n 4 194.938 216.793 184.473 1.00 67.22 ATOM 30 CG LYS n 4 193.773 216.356 183.608 1.00 67.22 ATOM 31 CD LYS n 4 192.575 217.265 183.810 1.00 67.22 ATOM 32 CE LYS n 4 192.902 218.705 183.446 1.00 67.22 ATOM 33 NZ LYS n 4 193.316 218.843 182.023 1.00 67.22 ATOM 34 N TRP n 5 197.739 217.187 185.731 1.00 74.27 ATOM 35 CA TRP n 5 198.934 218.001 185.916 1.00 74.27 ATOM 36 C TRP n 5 200.204 217.160 185.941 1.00 74.27 ATOM 37 O TRP n 5 201.285 217.684 185.655 1.00 74.27 ATOM 38 CB TRP n 5 198.813 218.851 187.183 1.00 74.27 ATOM 39 CG TRP n 5 197.418 219.374 187.492 1.00 74.27 ATOM 40 CD1 TRP n 5 196.775 219.286 188.689 1.00 74.27 ATOM 41 CD2 TRP n 5 196.516 220.080 186.610 1.00 74.27 ATOM 42 NE1 TRP n 5 195.541 219.876 188.616 1.00 74.27 ATOM 43 CE2 TRP n 5 195.354 220.368 187.352 1.00 74.27 ATOM 44 CE3 TRP n 5 196.577 220.494 185.272 1.00 74.27 ATOM 45 CZ2 TRP n 5 194.266 221.042 186.804 1.00 74.27 ATOM 46 CZ3 TRP n 5 195.493 221.154 184.730 1.00 74.27 ATOM 47 CH2 TRP n 5 194.356 221.427 185.496 1.00 74.27 ATOM 48 N ARG n 6 200.094 215.862 186.238 1.00 76.62 ATOM 49 CA ARG n 6 201.238 214.969 186.074 1.00 76.62 ATOM 50 C ARG n 6 201.621 214.840 184.604 1.00 76.62 ATOM 51 O ARG n 6 202.800 214.954 184.243 1.00 76.62 ATOM 52 CB ARG n 6 200.925 213.599 186.675 1.00 76.62 ATOM 53 CG ARG n 6 202.155 212.803 187.078 1.00 76.62 ATOM 54 CD ARG n 6 201.801 211.359 187.393 1.00 76.62 ATOM 55 NE ARG n 6 201.473 211.171 188.802 1.00 76.62 ATOM 56 CZ ARG n 6 201.681 210.048 189.476 1.00 76.62 ATOM 57 NH1 ARG n 6 202.214 208.983 188.899 1.00 76.62 ATOM 58 NH2 ARG n 6 201.348 209.993 190.763 1.00 76.62 ATOM 59 N LYS n 7 200.625 214.645 183.732 1.00 76.46 ATOM 60 CA LYS n 7 200.892 214.615 182.298 1.00 76.46 ATOM 61 C LYS n 7 201.299 215.986 181.772 1.00 76.46 ATOM 62 O LYS n 7 202.063 216.073 180.805 1.00 76.46 ATOM 63 CB LYS n 7 199.667 214.095 181.547 1.00 76.46 ATOM 64 CG LYS n 7 199.528 212.583 181.578 1.00 76.46 ATOM 65 CD LYS n 7 198.683 212.076 180.424 1.00 76.46 ATOM 66 CE LYS n 7 197.225 212.461 180.602 1.00 76.46 ATOM 67 NZ LYS n 7 196.343 211.724 179.657 1.00 76.46 ATOM 68 N LYS n 8 200.818 217.061 182.403 1.00 78.80 ATOM 69 CA LYS n 8 201.271 218.401 182.045 1.00 78.80 ATOM 70 C LYS n 8 202.745 218.601 182.385 1.00 78.80 ATOM 71 O LYS n 8 203.485 219.216 181.613 1.00 78.80 ATOM 72 CB LYS n 8 200.404 219.450 182.744 1.00 78.80 ATOM 73 CG LYS n 8 200.743 220.890 182.386 1.00 78.80 ATOM 74 CD LYS n 8 200.680 221.125 180.883 1.00 78.80 ATOM 75 CE LYS n 8 199.247 221.127 180.378 1.00 78.80 ATOM 76 NZ LYS n 8 198.449 222.226 180.984 1.00 78.80 ATOM 77 N ARG n 9 203.189 218.082 183.534 1.00 84.36 ATOM 78 CA ARG n 9 204.606 218.150 183.885 1.00 84.36 ATOM 79 C ARG n 9 205.452 217.288 182.954 1.00 84.36 ATOM 80 O ARG n 9 206.576 217.670 182.599 1.00 84.36 ATOM 81 CB ARG n 9 204.812 217.731 185.340 1.00 84.36 ATOM 82 CG ARG n 9 204.402 218.790 186.349 1.00 84.36 ATOM 83 CD ARG n 9 204.440 218.249 187.768 1.00 84.36 ATOM 84 NE ARG n 9 205.795 217.918 188.190 1.00 84.36 ATOM 85 CZ ARG n 9 206.103 217.370 189.358 1.00 84.36 ATOM 86 NH1 ARG n 9 205.172 217.074 190.249 1.00 84.36 ATOM 87 NH2 ARG n 9 207.378 217.114 189.638 1.00 84.36 ATOM 88 N MET n 10 204.923 216.129 182.542 1.00 81.19 ATOM 89 CA MET n 10 205.612 215.323 181.533 1.00 81.19 ATOM 90 C MET n 10 205.697 216.051 180.196 1.00 81.19 ATOM 91 O MET n 10 206.697 215.930 179.484 1.00 81.19 ATOM 92 CB MET n 10 204.931 213.965 181.355 1.00 81.19 ATOM 93 CG MET n 10 204.887 213.100 182.603 1.00 81.19 ATOM 94 SD MET n 10 206.391 212.138 182.841 1.00 81.19 ATOM 95 CE MET n 10 206.978 212.799 184.399 1.00 81.19 ATOM 96 N ARG n 11 204.676 216.836 179.848 1.00 82.85 ATOM 97 CA ARG n 11 204.742 217.613 178.612 1.00 82.85 ATOM 98 C ARG n 11 205.689 218.807 178.729 1.00 82.85 ATOM 99 O ARG n 11 206.312 219.197 177.734 1.00 82.85 ATOM 100 CB ARG n 11 203.342 218.064 178.199 1.00 82.85 ATOM 101 CG ARG n 11 202.524 216.938 177.590 1.00 82.85 ATOM 102 CD ARG n 11 201.156 217.395 177.125 1.00 82.85 ATOM 103 NE ARG n 11 200.373 216.280 176.606 1.00 82.85 ATOM 104 CZ ARG n 11 199.518 215.562 177.322 1.00 82.85 ATOM 105 NH1 ARG n 11 199.306 215.816 178.603 1.00 82.85 ATOM 106 NH2 ARG n 11 198.859 214.565 176.739 1.00 82.85 ATOM 107 N ARG n 12 205.809 219.401 179.918 1.00 87.08 ATOM 108 CA ARG n 12 206.805 220.451 180.128 1.00 87.08 ATOM 109 C ARG n 12 208.220 219.892 179.997 1.00 87.08 ATOM 110 O ARG n 12 209.096 220.510 179.371 1.00 87.08 ATOM 111 CB ARG n 12 206.602 221.105 181.498 1.00 87.08 ATOM 112 CG ARG n 12 205.308 221.898 181.626 1.00 87.08 ATOM 113 CD ARG n 12 205.176 222.549 182.994 1.00 87.08 ATOM 114 NE ARG n 12 203.896 223.230 183.154 1.00 87.08 ATOM 115 CZ ARG n 12 203.666 224.493 182.822 1.00 87.08 ATOM 116 NH1 ARG n 12 204.614 225.255 182.302 1.00 87.08 ATOM 117 NH2 ARG n 12 202.453 225.004 183.014 1.00 87.08 ATOM 118 N LEU n 13 208.447 218.697 180.557 1.00 93.78 ATOM 119 CA LEU n 13 209.722 218.008 180.364 1.00 93.78 ATOM 120 C LEU n 13 209.929 217.620 178.904 1.00 93.78 ATOM 121 O LEU n 13 211.062 217.628 178.411 1.00 93.78 ATOM 122 CB LEU n 13 209.804 216.774 181.262 1.00 93.78 ATOM 123 CG LEU n 13 209.847 217.003 182.772 1.00 93.78 ATOM 124 CD1 LEU n 13 209.786 215.676 183.508 1.00 93.78 ATOM 125 CD2 LEU n 13 211.102 217.771 183.152 1.00 93.78 ATOM 126 N LYS n 14 208.840 217.287 178.203 1.00 91.94 ATOM 127 CA LYS n 14 208.896 216.966 176.779 1.00 91.94 ATOM 128 C LYS n 14 209.394 218.155 175.972 1.00 91.94 ATOM 129 O LYS n 14 210.293 218.020 175.130 1.00 91.94 ATOM 130 CB LYS n 14 207.498 216.550 176.293 1.00 91.94 ATOM 131 CG LYS n 14 207.393 215.642 175.051 1.00 91.94 ATOM 132 CD LYS n 14 208.383 214.484 175.023 1.00 91.94 ATOM 133 CE LYS n 14 208.153 213.532 176.214 1.00 91.94 ATOM 134 NZ LYS n 14 209.254 212.590 176.408 1.00 91.94 ATOM 135 N ARG n 15 208.832 219.335 176.248 1.00 92.31 ATOM 136 CA ARG n 15 209.227 220.556 175.552 1.00 92.31 ATOM 137 C ARG n 15 210.672 220.928 175.860 1.00 92.31 ATOM 138 O ARG n 15 211.432 221.305 174.956 1.00 92.31 ATOM 139 CB ARG n 15 208.296 221.706 175.937 1.00 92.31 ATOM 140 CG ARG n 15 206.852 221.533 175.504 1.00 92.31 ATOM 141 CD ARG n 15 206.037 222.771 175.838 1.00 92.31 ATOM 142 NE ARG n 15 204.769 222.436 176.476 1.00 92.31 ATOM 143 CZ ARG n 15 203.640 222.192 175.825 1.00 92.31 ATOM 144 NH1 ARG n 15 203.580 222.233 174.505 1.00 92.31 ATOM 145 NH2 ARG n 15 202.542 221.902 176.517 1.00 92.31 ATOM 146 N LYS n 16 211.079 220.815 177.135 1.00102.09 ATOM 147 CA LYS n 16 212.440 221.224 177.483 1.00102.09 ATOM 148 C LYS n 16 213.477 220.239 176.942 1.00102.09 ATOM 149 O LYS n 16 214.554 220.655 176.498 1.00102.09 ATOM 150 CB LYS n 16 212.586 221.434 178.997 1.00102.09 ATOM 151 CG LYS n 16 212.645 220.198 179.875 1.00102.09 ATOM 152 CD LYS n 16 213.000 220.553 181.311 1.00102.09 ATOM 153 CE LYS n 16 214.408 221.121 181.410 1.00102.09 ATOM 154 NZ LYS n 16 214.803 221.382 182.822 1.00102.09 ATOM 155 N ARG n 17 213.142 218.945 176.885 1.00101.11 ATOM 156 CA ARG n 17 214.067 217.974 176.314 1.00101.11 ATOM 157 C ARG n 17 214.138 218.111 174.799 1.00101.11 ATOM 158 O ARG n 17 215.212 217.937 174.207 1.00101.11 ATOM 159 CB ARG n 17 213.652 216.560 176.715 1.00101.11 ATOM 160 CG ARG n 17 214.770 215.535 176.616 1.00101.11 ATOM 161 CD ARG n 17 214.353 214.194 177.200 1.00101.11 ATOM 162 NE ARG n 17 213.940 214.302 178.594 1.00101.11 ATOM 163 CZ ARG n 17 212.708 214.074 179.029 1.00101.11 ATOM 164 NH1 ARG n 17 211.736 213.735 178.199 1.00101.11 ATOM 165 NH2 ARG n 17 212.445 214.193 180.326 1.00101.11 ATOM 166 N ARG n 18 213.013 218.453 174.158 1.00102.24 ATOM 167 CA ARG n 18 213.014 218.681 172.716 1.00102.24 ATOM 168 C ARG n 18 213.852 219.901 172.346 1.00102.24 ATOM 169 O ARG n 18 214.653 219.849 171.403 1.00102.24 ATOM 170 CB ARG n 18 211.580 218.833 172.206 1.00102.24 ATOM 171 CG ARG n 18 211.477 219.142 170.718 1.00102.24 ATOM 172 CD ARG n 18 210.058 219.519 170.321 1.00102.24 ATOM 173 NE ARG n 18 209.129 218.412 170.517 1.00102.24 ATOM 174 CZ ARG n 18 208.129 218.415 171.388 1.00102.24 ATOM 175 NH1 ARG n 18 207.889 219.461 172.162 1.00102.24 ATOM 176 NH2 ARG n 18 207.351 217.342 171.485 1.00102.24 ATOM 177 N LYS n 19 213.708 221.002 173.095 1.00114.82 ATOM 178 CA LYS n 19 214.507 222.179 172.759 1.00114.82 ATOM 179 C LYS n 19 215.971 221.994 173.147 1.00114.82 ATOM 180 O LYS n 19 216.851 222.557 172.488 1.00114.82 ATOM 181 CB LYS n 19 213.939 223.452 173.396 1.00114.82 ATOM 182 CG LYS n 19 213.897 223.502 174.910 1.00114.82 ATOM 183 CD LYS n 19 213.381 224.863 175.367 1.00114.82 ATOM 184 CE LYS n 19 212.838 224.831 176.785 1.00114.82 ATOM 185 NZ LYS n 19 213.902 225.115 177.788 1.00114.82 ATOM 186 N MET n 20 216.256 221.177 174.169 1.00123.24 ATOM 187 CA MET n 20 217.641 220.831 174.480 1.00123.24 ATOM 188 C MET n 20 218.267 220.001 173.363 1.00123.24 ATOM 189 O MET n 20 219.441 220.188 173.020 1.00123.24 ATOM 190 CB MET n 20 217.707 220.084 175.812 1.00123.24 ATOM 191 CG MET n 20 219.118 219.781 176.289 1.00123.24 ATOM 192 SD MET n 20 220.070 221.273 176.632 1.00123.24 ATOM 193 CE MET n 20 219.292 221.835 178.144 1.00123.24 ATOM 194 N ARG n 21 217.493 219.080 172.780 1.00132.22 ATOM 195 CA ARG n 21 217.997 218.280 171.666 1.00132.22 ATOM 196 C ARG n 21 218.226 219.137 170.425 1.00132.22 ATOM 197 O ARG n 21 219.216 218.954 169.706 1.00132.22 ATOM 198 CB ARG n 21 217.033 217.133 171.360 1.00132.22 ATOM 199 CG ARG n 21 217.533 216.173 170.286 1.00132.22 ATOM 200 CD ARG n 21 218.927 215.655 170.613 1.00132.22 ATOM 201 NE ARG n 21 219.480 214.836 169.541 1.00132.22 ATOM 202 CZ ARG n 21 219.393 213.514 169.486 1.00132.22 ATOM 203 NH1 ARG n 21 218.777 212.822 170.430 1.00132.22 ATOM 204 NH2 ARG n 21 219.939 212.870 168.458 1.00132.22 ATOM 205 N GLN n 22 217.321 220.084 170.156 1.00135.29 ATOM 206 CA GLN n 22 217.500 220.942 168.985 1.00135.29 ATOM 207 C GLN n 22 218.618 221.961 169.192 1.00135.29 ATOM 208 O GLN n 22 219.237 222.409 168.220 1.00135.29 ATOM 209 CB GLN n 22 216.187 221.642 168.615 1.00135.29 ATOM 210 CG GLN n 22 214.952 220.751 168.303 1.00135.29 ATOM 211 CD GLN n 22 215.073 219.765 167.120 1.00135.29 ATOM 212 OE1 GLN n 22 216.104 219.639 166.456 1.00135.29 ATOM 213 NE2 GLN n 22 213.979 219.057 166.863 1.00135.29 ATOM 214 N ARG n 23 218.894 222.344 170.442 1.00146.42 ATOM 215 CA ARG n 23 220.059 223.183 170.699 1.00146.42 ATOM 216 C ARG n 23 221.348 222.376 170.773 1.00146.42 ATOM 217 O ARG n 23 222.435 222.961 170.699 1.00146.42 ATOM 218 CB ARG n 23 219.876 223.976 171.993 1.00146.42 ATOM 219 CG ARG n 23 218.863 225.105 171.903 1.00146.42 ATOM 220 CD ARG n 23 218.691 225.810 173.242 1.00146.42 ATOM 221 NE ARG n 23 219.866 226.593 173.613 1.00146.42 ATOM 222 CZ ARG n 23 220.750 226.235 174.534 1.00146.42 ATOM 223 NH1 ARG n 23 220.631 225.099 175.201 1.00146.42 ATOM 224 NH2 ARG n 23 221.780 227.036 174.790 1.00146.42 ATOM 225 N SER n 24 221.256 221.053 170.917 1.00159.72 ATOM 226 CA SER n 24 222.458 220.228 170.986 1.00159.72 ATOM 227 C SER n 24 223.027 219.952 169.599 1.00159.72 ATOM 228 O SER n 24 224.188 220.271 169.322 1.00159.72 ATOM 229 CB SER n 24 222.150 218.916 171.710 1.00159.72 ATOM 230 OG SER n 24 223.308 218.105 171.812 1.00159.72 ATOM 231 N LYS n 25 222.225 219.364 168.717 1.00166.91 ATOM 232 CA LYS n 25 222.686 219.017 167.377 1.00166.91 ATOM 233 C LYS n 25 222.726 220.236 166.463 1.00166.91 ATOM 234 O LYS n 25 223.305 220.188 165.378 1.00166.91 ATOM 235 CB LYS n 25 221.789 217.934 166.767 1.00166.91 ATOM 236 CG LYS n 25 221.803 216.540 167.438 1.00166.91 ATOM 237 CD LYS n 25 223.183 215.858 167.516 1.00166.91 ATOM 238 CE LYS n 25 223.844 215.951 168.897 1.00166.91 ATOM 239 NZ LYS n 25 225.200 215.340 168.905 1.00166.91 TER