HEADER IMMUNE SYSTEM 31-DEC-69 7WT3 TITLE Crystal structure of HLA-A*2402 complexed with 4-mer lipopeptide COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHC class I antigen; COMPND 3 CHAIN: A, D; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.89 ANGSTORMS REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO D 185 REMARK 465 PRO D 186 REMARK 465 LYS D 187 REMARK 465 THR D 188 REMARK 465 HIS D 189 REMARK 465 MET D 190 REMARK 465 THR D 191 REMARK 465 HIS D 192 REMARK 465 HIS D 193 REMARK 465 PRO D 194 REMARK 465 ILE D 195 REMARK 465 SER D 196 REMARK 465 ASP D 197 REMARK 465 HIS D 198 REMARK 465 GLU D 199 REMARK 465 ALA D 200 REMARK 465 THR D 201 REMARK 465 LEU D 202 REMARK 465 LEU D 207 REMARK 465 GLY D 208 REMARK 465 PHE D 209 REMARK 465 THR D 217 REMARK 465 TRP D 218 REMARK 465 GLN D 219 REMARK 465 ARG D 220 REMARK 465 ASP D 221 REMARK 465 GLY D 222 REMARK 465 GLU D 223 REMARK 465 ASP D 224 REMARK 465 GLN D 225 REMARK 465 THR D 226 REMARK 465 GLN D 227 REMARK 465 ASP D 228 REMARK 465 THR D 229 REMARK 465 GLU D 230 DBREF 7WT3 D 0 276 UNP A0A411J0 A0A411J078_ 24 300 SEQRES 1 D 63 THR ASP PRO PRO LYS THR HIS MET THR HIS HIS PRO ILE SEQRES 2 D 63 SER ASP HIS GLU ALA THR LEU ARG CYS TRP ALA LEU GLY SEQRES 3 D 63 PHE TYR PRO ALA GLU ILE THR LEU THR TRP GLN ARG ASP SEQRES 4 D 63 GLY GLU ASP GLN THR GLN ASP THR GLU LEU VAL GLU THR SEQRES 5 D 63 ARG PRO ALA GLY ASP GLY THR PHE GLN LYS TRP ATOM 1 N THR D 182 10.655 -36.555 36.459 1.00 82.99 ATOM 2 CA THR D 182 9.429 -35.878 36.045 1.00 88.15 ATOM 3 C THR D 182 8.302 -36.337 36.962 1.00 93.92 ATOM 4 O THR D 182 7.787 -37.451 36.826 1.00 90.42 ATOM 5 CB THR D 182 9.109 -36.187 34.586 1.00 83.44 ATOM 6 OG1 THR D 182 8.488 -37.475 34.498 1.00 86.99 ATOM 7 CG2 THR D 182 10.380 -36.205 33.753 1.00 76.52 ATOM 8 N ASP D 183 7.923 -35.487 37.914 1.00 88.20 ATOM 9 CA ASP D 183 6.886 -35.844 38.873 1.00 80.58 ATOM 10 C ASP D 183 5.740 -34.838 38.846 1.00 81.87 ATOM 11 O ASP D 183 5.824 -33.774 39.458 1.00 82.37 ATOM 12 CB ASP D 183 7.470 -35.940 40.282 1.00 81.74 ATOM 13 CG ASP D 183 6.705 -36.908 41.159 1.00 80.89 ATOM 14 OD1 ASP D 183 6.964 -38.126 41.062 1.00 75.48 ATOM 15 OD2 ASP D 183 5.837 -36.454 41.936 1.00 84.51 ATOM 16 N ARG D 202 -12.239 -22.232 46.404 1.00 81.32 ATOM 17 CA ARG D 202 -11.003 -22.851 46.874 1.00 88.28 ATOM 18 C ARG D 202 -10.777 -24.237 46.272 1.00 86.44 ATOM 19 O ARG D 202 -11.538 -25.169 46.537 1.00 88.26 ATOM 20 CB ARG D 202 -11.002 -22.961 48.403 1.00 86.19 ATOM 21 CG ARG D 202 -9.923 -22.139 49.088 1.00 84.31 ATOM 22 CD ARG D 202 -9.378 -22.836 50.331 1.00 81.61 ATOM 23 NE ARG D 202 -10.331 -22.876 51.434 1.00 80.64 ATOM 24 CZ ARG D 202 -10.485 -21.908 52.328 1.00 80.87 ATOM 25 NH1 ARG D 202 -9.788 -20.786 52.259 1.00 86.43 ATOM 26 NH2 ARG D 202 -11.363 -22.070 53.315 1.00 71.46 ATOM 27 N CYS D 203 -9.727 -24.374 45.466 1.00 82.07 ATOM 28 CA CYS D 203 -9.261 -25.675 45.007 1.00 82.50 ATOM 29 C CYS D 203 -7.873 -25.922 45.583 1.00 86.97 ATOM 30 O CYS D 203 -6.996 -25.056 45.495 1.00 87.38 ATOM 31 CB CYS D 203 -9.250 -25.771 43.473 1.00 77.64 ATOM 32 SG CYS D 203 -8.215 -24.579 42.588 1.00 77.98 ATOM 33 N TRP D 204 -7.686 -27.089 46.190 1.00 83.34 ATOM 34 CA TRP D 204 -6.426 -27.444 46.826 1.00 82.57 ATOM 35 C TRP D 204 -5.548 -28.232 45.857 1.00 83.98 ATOM 36 O TRP D 204 -6.016 -28.764 44.848 1.00 83.02 ATOM 37 CB TRP D 204 -6.677 -28.255 48.099 1.00 80.48 ATOM 38 CG TRP D 204 -7.584 -27.573 49.090 1.00 84.44 ATOM 39 CD1 TRP D 204 -8.904 -27.263 48.916 1.00 87.88 ATOM 40 CD2 TRP D 204 -7.243 -27.135 50.414 1.00 86.77 ATOM 41 NE1 TRP D 204 -9.401 -26.650 50.041 1.00 86.65 ATOM 42 CE2 TRP D 204 -8.405 -26.562 50.977 1.00 87.91 ATOM 43 CE3 TRP D 204 -6.071 -27.169 51.176 1.00 82.98 ATOM 44 CZ2 TRP D 204 -8.427 -26.028 52.265 1.00 81.35 ATOM 45 CZ3 TRP D 204 -6.096 -26.636 52.457 1.00 82.29 ATOM 46 CH2 TRP D 204 -7.266 -26.074 52.987 1.00 79.49 ATOM 47 N ALA D 205 -4.258 -28.300 46.177 1.00 84.45 ATOM 48 CA ALA D 205 -3.295 -28.974 45.306 1.00 83.38 ATOM 49 C ALA D 205 -2.673 -30.204 45.970 1.00 76.96 ATOM 50 O ALA D 205 -2.314 -30.181 47.145 1.00 69.64 ATOM 51 CB ALA D 205 -2.207 -28.001 44.872 1.00 79.01 ATOM 52 N TYR D 209 6.900 -32.624 42.527 1.00 73.61 ATOM 53 CA TYR D 209 8.206 -31.974 42.480 1.00 87.60 ATOM 54 C TYR D 209 8.380 -31.242 41.153 1.00 89.67 ATOM 55 O TYR D 209 8.218 -31.835 40.084 1.00 88.81 ATOM 56 CB TYR D 209 9.333 -32.996 42.687 1.00 88.38 ATOM 57 CG TYR D 209 10.747 -32.432 42.604 1.00 88.47 ATOM 58 CD1 TYR D 209 11.405 -32.323 41.379 1.00 86.69 ATOM 59 CD2 TYR D 209 11.432 -32.036 43.751 1.00 82.33 ATOM 60 CE1 TYR D 209 12.695 -31.817 41.293 1.00 81.49 ATOM 61 CE2 TYR D 209 12.727 -31.529 43.674 1.00 77.63 ATOM 62 CZ TYR D 209 13.353 -31.421 42.440 1.00 74.71 ATOM 63 OH TYR D 209 14.639 -30.920 42.347 1.00 58.01 ATOM 64 N PRO D 210 8.742 -29.953 41.220 1.00 85.53 ATOM 65 CA PRO D 210 9.061 -29.258 42.473 1.00 89.51 ATOM 66 C PRO D 210 7.850 -28.662 43.196 1.00 91.19 ATOM 67 O PRO D 210 6.706 -29.031 42.921 1.00 84.95 ATOM 68 CB PRO D 210 9.996 -28.145 42.005 1.00 92.02 ATOM 69 CG PRO D 210 9.476 -27.801 40.645 1.00 93.00 ATOM 70 CD PRO D 210 8.973 -29.096 40.044 1.00 86.41 ATOM 71 N ALA D 211 8.123 -27.747 44.131 1.00 88.98 ATOM 72 CA ALA D 211 7.076 -26.933 44.733 1.00 88.93 ATOM 73 C ALA D 211 6.517 -25.898 43.766 1.00 87.97 ATOM 74 O ALA D 211 5.495 -25.274 44.073 1.00 79.87 ATOM 75 CB ALA D 211 7.610 -26.233 45.984 1.00 82.02 ATOM 76 N GLU D 212 7.167 -25.699 42.621 1.00 88.52 ATOM 77 CA GLU D 212 6.681 -24.762 41.619 1.00 88.29 ATOM 78 C GLU D 212 5.350 -25.239 41.058 1.00 90.19 ATOM 79 O GLU D 212 5.231 -26.375 40.589 1.00 92.34 ATOM 80 CB GLU D 212 7.705 -24.615 40.495 1.00 94.20 ATOM 81 CG GLU D 212 7.274 -23.691 39.371 1.00 91.49 ATOM 82 CD GLU D 212 8.183 -23.791 38.163 1.00 94.10 ATOM 83 OE1 GLU D 212 8.834 -24.845 37.995 1.00 92.77 ATOM 84 OE2 GLU D 212 8.250 -22.818 37.384 1.00 97.27 ATOM 85 N ILE D 213 4.345 -24.366 41.105 1.00 90.00 ATOM 86 CA ILE D 213 2.997 -24.701 40.667 1.00 87.53 ATOM 87 C ILE D 213 2.322 -23.418 40.208 1.00 91.08 ATOM 88 O ILE D 213 2.702 -22.313 40.606 1.00 91.16 ATOM 89 CB ILE D 213 2.191 -25.392 41.796 1.00 91.75 ATOM 90 CG1 ILE D 213 1.065 -26.255 41.222 1.00 93.68 ATOM 91 CG2 ILE D 213 1.632 -24.367 42.765 1.00 85.56 ATOM 92 CD1 ILE D 213 0.299 -27.027 42.283 1.00 89.58 ATOM 93 N THR D 214 1.320 -23.565 39.344 1.00 90.47 ATOM 94 CA THR D 214 0.564 -22.420 38.835 1.00 89.36 ATOM 95 C THR D 214 -0.918 -22.774 38.896 1.00 89.31 ATOM 96 O THR D 214 -1.409 -23.558 38.079 1.00 87.56 ATOM 97 CB THR D 214 0.990 -22.052 37.419 1.00 85.56 ATOM 98 OG1 THR D 214 2.352 -21.605 37.432 1.00 91.16 ATOM 99 CG2 THR D 214 0.107 -20.942 36.874 1.00 82.54 ATOM 100 N LEU D 215 -1.617 -22.201 39.872 1.00 87.29 ATOM 101 CA LEU D 215 -3.051 -22.405 40.025 1.00 86.62 ATOM 102 C LEU D 215 -3.828 -21.394 39.189 1.00 91.44 ATOM 103 O LEU D 215 -3.897 -20.214 39.533 1.00 92.90 ATOM 104 CB LEU D 215 -3.462 -22.298 41.497 1.00 82.48 ATOM 105 CG LEU D 215 -3.454 -23.578 42.340 1.00 84.88 ATOM 106 CD1 LEU D 215 -2.058 -24.173 42.453 1.00 84.13 ATOM 107 CD2 LEU D 215 -4.039 -23.314 43.720 1.00 82.74 ATOM 108 N LEU D 230 -4.808 -16.739 47.138 1.00 84.34 ATOM 109 CA LEU D 230 -3.667 -17.529 46.684 1.00 83.11 ATOM 110 C LEU D 230 -2.535 -17.509 47.714 1.00 84.16 ATOM 111 O LEU D 230 -1.717 -16.589 47.731 1.00 86.19 ATOM 112 CB LEU D 230 -3.163 -17.008 45.336 1.00 72.45 ATOM 113 CG LEU D 230 -2.032 -17.802 44.683 1.00 64.17 ATOM 114 CD1 LEU D 230 -2.536 -19.156 44.207 1.00 75.08 ATOM 115 CD2 LEU D 230 -1.409 -17.019 43.538 1.00 64.62 ATOM 116 N VAL D 231 -2.491 -18.530 48.571 1.00 79.34 ATOM 117 CA VAL D 231 -1.475 -18.588 49.615 1.00 81.85 ATOM 118 C VAL D 231 -0.140 -19.033 49.024 1.00 80.79 ATOM 119 O VAL D 231 -0.067 -19.605 47.933 1.00 77.28 ATOM 120 CB VAL D 231 -1.914 -19.517 50.761 1.00 79.58 ATOM 121 CG1 VAL D 231 -3.090 -18.911 51.512 1.00 81.32 ATOM 122 CG2 VAL D 231 -2.266 -20.896 50.221 1.00 77.89 ATOM 123 N GLU D 232 0.935 -18.760 49.763 1.00 77.05 ATOM 124 CA GLU D 232 2.263 -19.169 49.327 1.00 75.62 ATOM 125 C GLU D 232 2.423 -20.679 49.459 1.00 75.85 ATOM 126 O GLU D 232 1.928 -21.290 50.411 1.00 70.99 ATOM 127 CB GLU D 232 3.342 -18.459 50.147 1.00 76.98 ATOM 128 CG GLU D 232 4.758 -18.700 49.629 1.00 82.30 ATOM 129 CD GLU D 232 5.772 -18.938 50.739 1.00 81.10 ATOM 130 OE1 GLU D 232 5.615 -18.354 51.832 1.00 77.90 ATOM 131 OE2 GLU D 232 6.727 -19.716 50.515 1.00 76.85 ATOM 132 N THR D 233 3.122 -21.278 48.494 1.00 64.85 ATOM 133 CA THR D 233 3.359 -22.716 48.513 1.00 74.08 ATOM 134 C THR D 233 4.013 -23.133 49.826 1.00 75.78 ATOM 135 O THR D 233 5.126 -22.700 50.141 1.00 74.12 ATOM 136 CB THR D 233 4.239 -23.124 47.332 1.00 73.23 ATOM 137 OG1 THR D 233 3.629 -22.701 46.108 1.00 75.13 ATOM 138 CG2 THR D 233 4.419 -24.636 47.304 1.00 71.73 ATOM 139 N ARG D 234 3.313 -23.970 50.592 1.00 75.01 ATOM 140 CA ARG D 234 3.778 -24.460 51.877 1.00 76.04 ATOM 141 C ARG D 234 4.147 -25.937 51.784 1.00 76.17 ATOM 142 O ARG D 234 3.554 -26.681 50.998 1.00 78.51 ATOM 143 CB ARG D 234 2.705 -24.275 52.959 1.00 78.26 ATOM 144 CG ARG D 234 1.465 -25.142 52.773 1.00 78.22 ATOM 145 CD ARG D 234 0.288 -24.612 53.581 1.00 81.80 ATOM 146 NE ARG D 234 -0.879 -25.485 53.504 1.00 83.08 ATOM 147 CZ ARG D 234 -2.083 -25.167 53.962 1.00 81.96 ATOM 148 NH1 ARG D 234 -2.324 -23.990 54.517 1.00 78.30 ATOM 149 NH2 ARG D 234 -3.071 -26.052 53.859 1.00 85.14 ATOM 150 N PRO D 235 5.134 -26.388 52.552 1.00 75.13 ATOM 151 CA PRO D 235 5.462 -27.815 52.584 1.00 77.91 ATOM 152 C PRO D 235 4.644 -28.569 53.618 1.00 77.40 ATOM 153 O PRO D 235 4.229 -28.032 54.646 1.00 75.55 ATOM 154 CB PRO D 235 6.952 -27.816 52.954 1.00 72.75 ATOM 155 CG PRO D 235 7.126 -26.584 53.762 1.00 72.06 ATOM 156 CD PRO D 235 6.141 -25.570 53.247 1.00 73.75 ATOM 157 N ALA D 236 4.410 -29.847 53.320 1.00 78.87 ATOM 158 CA ALA D 236 3.617 -30.679 54.217 1.00 80.53 ATOM 159 C ALA D 236 4.467 -31.233 55.354 1.00 78.29 ATOM 160 O ALA D 236 4.065 -31.183 56.521 1.00 73.96 ATOM 161 CB ALA D 236 2.953 -31.813 53.433 1.00 80.93 ATOM 162 N GLY D 237 5.645 -31.759 55.031 1.00 78.15 ATOM 163 CA GLY D 237 6.518 -32.338 56.032 1.00 76.24 ATOM 164 C GLY D 237 7.061 -33.687 55.613 1.00 77.53 ATOM 165 O GLY D 237 7.831 -34.314 56.348 1.00 71.88 ATOM 166 N ASP D 238 6.665 -34.143 54.423 1.00 73.51 ATOM 167 CA ASP D 238 7.076 -35.437 53.891 1.00 78.50 ATOM 168 C ASP D 238 7.717 -35.283 52.515 1.00 77.38 ATOM 169 O ASP D 238 7.699 -36.213 51.702 1.00 75.39 ATOM 170 CB ASP D 238 5.890 -36.402 53.839 1.00 76.08 ATOM 171 CG ASP D 238 4.600 -35.722 53.405 1.00 79.62 ATOM 172 OD1 ASP D 238 4.669 -34.604 52.850 1.00 80.80 ATOM 173 OD2 ASP D 238 3.514 -36.298 53.630 1.00 78.17 ATOM 174 N GLY D 239 8.291 -34.110 52.245 1.00 69.05 ATOM 175 CA GLY D 239 8.920 -33.826 50.975 1.00 74.37 ATOM 176 C GLY D 239 8.032 -33.153 49.951 1.00 75.02 ATOM 177 O GLY D 239 8.545 -32.680 48.928 1.00 72.27 ATOM 178 N THR D 240 6.726 -33.088 50.189 1.00 72.66 ATOM 179 CA THR D 240 5.771 -32.545 49.235 1.00 77.97 ATOM 180 C THR D 240 5.249 -31.196 49.728 1.00 76.48 ATOM 181 O THR D 240 5.636 -30.701 50.792 1.00 70.80 ATOM 182 CB THR D 240 4.625 -33.532 49.002 1.00 78.29 ATOM 183 OG1 THR D 240 3.762 -33.547 50.146 1.00 82.28 ATOM 184 CG2 THR D 240 5.174 -34.936 48.768 1.00 75.97 ATOM 185 N PHE D 241 4.352 -30.602 48.940 1.00 77.00 ATOM 186 CA PHE D 241 3.907 -29.235 49.174 1.00 83.97 ATOM 187 C PHE D 241 2.397 -29.127 48.994 1.00 79.48 ATOM 188 O PHE D 241 1.737 -30.035 48.485 1.00 75.40 ATOM 189 CB PHE D 241 4.639 -28.252 48.250 1.00 79.08 ATOM 190 CG PHE D 241 6.107 -28.148 48.537 1.00 80.46 ATOM 191 CD1 PHE D 241 7.008 -29.011 47.932 1.00 77.19 ATOM 192 CD2 PHE D 241 6.585 -27.203 49.431 1.00 78.20 ATOM 193 CE1 PHE D 241 8.361 -28.923 48.205 1.00 80.47 ATOM 194 CE2 PHE D 241 7.935 -27.113 49.711 1.00 78.03 ATOM 195 CZ PHE D 241 8.825 -27.973 49.096 1.00 80.17 ATOM 196 N GLN D 242 1.856 -27.991 49.437 1.00 76.42 ATOM 197 CA GLN D 242 0.430 -27.703 49.382 1.00 75.88 ATOM 198 C GLN D 242 0.234 -26.247 48.987 1.00 79.75 ATOM 199 O GLN D 242 1.033 -25.382 49.352 1.00 79.33 ATOM 200 CB GLN D 242 -0.262 -27.947 50.732 1.00 74.43 ATOM 201 CG GLN D 242 0.170 -29.198 51.475 1.00 72.85 ATOM 202 CD GLN D 242 -0.343 -29.218 52.907 1.00 81.33 ATOM 203 OE1 GLN D 242 -0.811 -28.201 53.422 1.00 79.14 ATOM 204 NE2 GLN D 242 -0.258 -30.378 53.557 1.00 75.32 ATOM 205 N LYS D 243 -0.843 -25.980 48.251 1.00 79.88 ATOM 206 CA LYS D 243 -1.181 -24.618 47.859 1.00 80.68 ATOM 207 C LYS D 243 -2.647 -24.570 47.453 1.00 84.51 ATOM 208 O LYS D 243 -3.193 -25.547 46.935 1.00 85.92 ATOM 209 CB LYS D 243 -0.295 -24.125 46.706 1.00 80.23 ATOM 210 CG LYS D 243 -0.380 -22.625 46.438 1.00 76.50 ATOM 211 CD LYS D 243 0.550 -22.226 45.303 1.00 74.53 ATOM 212 CE LYS D 243 0.675 -20.719 45.152 1.00 68.26 ATOM 213 NZ LYS D 243 1.668 -20.356 44.099 1.00 65.59 ATOM 214 N TRP D 244 -3.278 -23.426 47.701 1.00 88.34 ATOM 215 CA TRP D 244 -4.635 -23.192 47.222 1.00 86.39 ATOM 216 C TRP D 244 -4.870 -21.716 46.916 1.00 79.86 ATOM 217 O TRP D 244 -3.925 -20.933 46.825 1.00 81.18 ATOM 218 CB TRP D 244 -5.667 -23.694 48.235 1.00 85.46 ATOM 219 CG TRP D 244 -5.599 -23.061 49.592 1.00 83.98 ATOM 220 CD1 TRP D 244 -5.055 -23.605 50.720 1.00 86.14 ATOM 221 CD2 TRP D 244 -6.118 -21.779 49.977 1.00 83.04 ATOM 222 NE1 TRP D 244 -5.196 -22.741 51.779 1.00 85.68 ATOM 223 CE2 TRP D 244 -5.844 -21.613 51.349 1.00 81.78 ATOM 224 CE3 TRP D 244 -6.783 -20.754 49.294 1.00 85.66 ATOM 225 CZ2 TRP D 244 -6.213 -20.465 52.051 1.00 81.47 ATOM 226 CZ3 TRP D 244 -7.148 -19.615 49.993 1.00 87.19 ATOM 227 CH2 TRP D 244 -6.860 -19.480 51.358 1.00 82.75 TER