HEADER RNA BINDING PROTEIN 31-DEC-69 7ZGQ TITLE Polymerase module of yeast CPF in complex with the yPIM of Cft2 COMPND MOL_ID: 3; COMPND 2 MOLECULE: mRNA 3'-end-processing protein YTH1; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG B 40 REMARK 465 GLU B 41 REMARK 465 GLY B 42 DBREF 7ZGQ B 1 208 UNP A0A6A5Q2 A0A6A5Q2R8_ 1 208 SEQRES 1 B 35 PHE SER LEU ASP PRO ASP ARG PRO ILE CYS GLU PHE TYR SEQRES 2 B 35 ASN SER ARG GLU GLY PRO LYS SER CYS PRO ARG GLY PRO SEQRES 3 B 35 LEU CYS PRO LYS LYS HIS VAL LEU PRO ATOM 1 N PHE B 25 125.530 122.596 118.961 1.00 69.21 ATOM 2 CA PHE B 25 126.900 122.687 119.444 1.00 66.11 ATOM 3 C PHE B 25 127.261 121.459 120.269 1.00 66.14 ATOM 4 O PHE B 25 126.451 120.968 121.059 1.00 69.20 ATOM 5 CB PHE B 25 127.089 123.954 120.282 1.00 64.74 ATOM 6 CG PHE B 25 128.518 124.272 120.580 1.00 64.40 ATOM 7 CD1 PHE B 25 129.485 124.146 119.600 1.00 62.73 ATOM 8 CD2 PHE B 25 128.897 124.698 121.840 1.00 62.43 ATOM 9 CE1 PHE B 25 130.802 124.437 119.871 1.00 68.72 ATOM 10 CE2 PHE B 25 130.213 124.991 122.118 1.00 64.71 ATOM 11 CZ PHE B 25 131.168 124.861 121.132 1.00 68.00 ATOM 12 N SER B 26 128.482 120.967 120.086 1.00 74.52 ATOM 13 CA SER B 26 128.977 119.823 120.835 1.00 77.11 ATOM 14 C SER B 26 130.320 120.164 121.464 1.00 78.53 ATOM 15 O SER B 26 131.079 120.985 120.940 1.00 77.50 ATOM 16 CB SER B 26 129.119 118.582 119.947 1.00 78.01 ATOM 17 OG SER B 26 129.654 117.492 120.676 1.00 80.29 ATOM 18 N LEU B 27 130.605 119.522 122.598 1.00 78.12 ATOM 19 CA LEU B 27 131.869 119.739 123.291 1.00 78.64 ATOM 20 C LEU B 27 133.067 119.246 122.492 1.00 78.12 ATOM 21 O LEU B 27 134.199 119.625 122.811 1.00 78.64 ATOM 22 CB LEU B 27 131.857 119.062 124.668 1.00 78.58 ATOM 23 CG LEU B 27 130.985 119.595 125.816 1.00 76.56 ATOM 24 CD1 LEU B 27 131.505 120.944 126.297 1.00 75.28 ATOM 25 CD2 LEU B 27 129.499 119.676 125.484 1.00 73.55 ATOM 26 N ASP B 28 132.850 118.419 121.470 1.00 87.39 ATOM 27 CA ASP B 28 133.928 117.984 120.596 1.00 90.14 ATOM 28 C ASP B 28 133.873 118.798 119.316 1.00 92.28 ATOM 29 O ASP B 28 132.950 118.605 118.511 1.00 92.87 ATOM 30 CB ASP B 28 133.806 116.494 120.286 1.00 90.07 ATOM 31 CG ASP B 28 133.734 115.641 121.537 1.00 92.92 ATOM 32 OD1 ASP B 28 134.456 115.945 122.509 1.00 93.04 ATOM 33 OD2 ASP B 28 132.954 114.665 121.547 1.00 90.70 ATOM 34 N PRO B 29 134.813 119.712 119.080 1.00 92.37 ATOM 35 CA PRO B 29 134.755 120.527 117.859 1.00 90.43 ATOM 36 C PRO B 29 135.022 119.716 116.600 1.00 88.97 ATOM 37 O PRO B 29 134.281 119.822 115.619 1.00 88.21 ATOM 38 CB PRO B 29 135.842 121.585 118.092 1.00 85.07 ATOM 39 CG PRO B 29 136.775 120.963 119.068 1.00 87.60 ATOM 40 CD PRO B 29 135.940 120.087 119.950 1.00 86.73 ATOM 41 N ASP B 30 136.072 118.895 116.621 1.00 91.02 ATOM 42 CA ASP B 30 136.470 118.119 115.446 1.00 91.70 ATOM 43 C ASP B 30 135.732 116.780 115.432 1.00 92.69 ATOM 44 O ASP B 30 136.314 115.700 115.548 1.00 90.98 ATOM 45 CB ASP B 30 137.981 117.926 115.423 1.00 93.74 ATOM 46 CG ASP B 30 138.697 119.027 114.669 1.00 93.91 ATOM 47 OD1 ASP B 30 138.594 119.059 113.425 1.00 93.22 ATOM 48 OD2 ASP B 30 139.365 119.858 115.319 1.00 92.56 ATOM 49 N ARG B 31 134.417 116.871 115.283 1.00 94.85 ATOM 50 CA ARG B 31 133.676 115.630 115.141 1.00 93.97 ATOM 51 C ARG B 31 133.288 115.407 113.683 1.00 94.79 ATOM 52 O ARG B 31 133.106 116.367 112.928 1.00 95.52 ATOM 53 CB ARG B 31 132.419 115.642 116.017 1.00 90.24 ATOM 54 CG ARG B 31 131.428 116.738 115.688 1.00 90.89 ATOM 55 CD ARG B 31 130.600 117.105 116.906 1.00 91.10 ATOM 56 NE ARG B 31 129.521 118.028 116.581 1.00 93.45 ATOM 57 CZ ARG B 31 129.636 119.349 116.592 1.00 94.15 ATOM 58 NH1 ARG B 31 130.777 119.940 116.906 1.00 91.10 ATOM 59 NH2 ARG B 31 128.580 120.095 116.282 1.00 95.93 ATOM 60 N PRO B 32 133.168 114.150 113.253 1.00101.85 ATOM 61 CA PRO B 32 132.882 113.881 111.839 1.00101.91 ATOM 62 C PRO B 32 131.512 114.396 111.423 1.00102.38 ATOM 63 O PRO B 32 130.583 114.486 112.229 1.00 99.28 ATOM 64 CB PRO B 32 132.956 112.353 111.746 1.00100.54 ATOM 65 CG PRO B 32 132.721 111.875 113.140 1.00100.24 ATOM 66 CD PRO B 32 133.342 112.908 114.026 1.00100.49 ATOM 67 N ILE B 33 131.405 114.747 110.139 1.00106.87 ATOM 68 CA ILE B 33 130.133 115.189 109.588 1.00104.93 ATOM 69 C ILE B 33 129.123 114.045 109.663 1.00107.47 ATOM 70 O ILE B 33 129.466 112.868 109.488 1.00109.68 ATOM 71 CB ILE B 33 130.321 115.693 108.145 1.00105.56 ATOM 72 CG1 ILE B 33 130.538 117.209 108.128 1.00106.07 ATOM 73 CG2 ILE B 33 129.140 115.316 107.256 1.00104.77 ATOM 74 CD1 ILE B 33 131.867 117.651 108.706 1.00104.25 ATOM 75 N CYS B 34 127.865 114.397 109.944 1.00109.50 ATOM 76 CA CYS B 34 126.836 113.383 110.156 1.00112.18 ATOM 77 C CYS B 34 126.635 112.515 108.919 1.00114.02 ATOM 78 O CYS B 34 126.456 111.296 109.033 1.00112.49 ATOM 79 CB CYS B 34 125.521 114.050 110.559 1.00110.19 ATOM 80 SG CYS B 34 124.360 112.954 111.401 1.00110.10 ATOM 81 N GLU B 35 126.648 113.124 107.733 1.00120.42 ATOM 82 CA GLU B 35 126.431 112.435 106.461 1.00120.42 ATOM 83 C GLU B 35 125.058 111.772 106.390 1.00121.17 ATOM 84 O GLU B 35 124.844 110.860 105.584 1.00120.17 ATOM 85 CB GLU B 35 127.533 111.404 106.185 1.00117.92 ATOM 86 N PHE B 36 124.123 112.218 107.231 1.00121.81 ATOM 87 CA PHE B 36 122.752 111.728 107.189 1.00120.07 ATOM 88 C PHE B 36 121.744 112.857 107.359 1.00120.83 ATOM 89 O PHE B 36 120.560 112.581 107.588 1.00123.41 ATOM 90 CB PHE B 36 122.524 110.659 108.264 1.00118.66 ATOM 91 N TYR B 37 122.175 114.110 107.258 1.00122.68 ATOM 92 CA TYR B 37 121.323 115.272 107.455 1.00122.68 ATOM 93 C TYR B 37 121.158 116.014 106.136 1.00124.22 ATOM 94 O TYR B 37 122.140 116.280 105.436 1.00125.10 ATOM 95 CB TYR B 37 121.918 116.205 108.515 1.00122.05 ATOM 96 CG TYR B 37 120.971 117.270 109.017 1.00124.36 ATOM 97 CD1 TYR B 37 120.876 118.500 108.379 1.00125.30 ATOM 98 CD2 TYR B 37 120.180 117.051 110.135 1.00125.17 ATOM 99 CE1 TYR B 37 120.015 119.477 108.837 1.00124.79 ATOM 100 CE2 TYR B 37 119.315 118.023 110.600 1.00124.55 ATOM 101 CZ TYR B 37 119.237 119.233 109.947 1.00124.16 ATOM 102 OH TYR B 37 118.377 120.204 110.406 1.00123.01 ATOM 103 N ASN B 38 119.915 116.347 105.802 1.00130.25 ATOM 104 CA ASN B 38 119.602 117.052 104.570 1.00131.84 ATOM 105 C ASN B 38 119.206 118.491 104.874 1.00133.61 ATOM 106 O ASN B 38 118.750 118.816 105.974 1.00132.91 ATOM 107 CB ASN B 38 118.495 116.330 103.777 1.00131.52 ATOM 108 CG ASN B 38 117.103 116.888 104.043 1.00132.91 ATOM 109 OD1 ASN B 38 116.721 117.145 105.187 1.00133.75 ATOM 110 ND2 ASN B 38 116.337 117.080 102.977 1.00130.94 ATOM 111 N SER B 39 119.401 119.357 103.884 1.00124.48 ATOM 112 CA SER B 39 119.084 120.772 104.030 1.00122.59 ATOM 113 C SER B 39 118.761 121.403 102.679 1.00121.40 ATOM 114 O SER B 39 119.527 121.275 101.724 1.00119.67 ATOM 115 CB SER B 39 120.246 121.517 104.693 1.00122.06 ATOM 116 OG SER B 39 120.493 121.023 105.998 1.00121.36 ATOM 117 N PRO B 43 114.439 118.363 108.559 1.00125.90 ATOM 118 CA PRO B 43 114.965 118.489 109.922 1.00125.04 ATOM 119 C PRO B 43 115.063 117.154 110.653 1.00124.89 ATOM 120 O PRO B 43 115.837 117.024 111.601 1.00123.56 ATOM 121 CB PRO B 43 113.918 119.418 110.583 1.00124.43 ATOM 122 CG PRO B 43 113.290 120.092 109.356 1.00123.91 ATOM 123 CD PRO B 43 113.061 118.862 108.575 1.00124.89 ATOM 124 N LYS B 44 114.279 116.174 110.210 1.00120.77 ATOM 125 CA LYS B 44 114.283 114.837 110.787 1.00120.28 ATOM 126 C LYS B 44 115.106 113.852 109.968 1.00119.81 ATOM 127 O LYS B 44 114.959 112.639 110.147 1.00120.00 ATOM 128 CB LYS B 44 112.851 114.323 110.941 1.00118.93 ATOM 129 N SER B 45 115.960 114.348 109.069 1.00121.34 ATOM 130 CA SER B 45 116.755 113.463 108.223 1.00122.69 ATOM 131 C SER B 45 117.712 112.610 109.046 1.00122.75 ATOM 132 O SER B 45 118.018 111.471 108.674 1.00123.00 ATOM 133 CB SER B 45 117.525 114.286 107.190 1.00122.17 ATOM 134 OG SER B 45 118.059 115.462 107.773 1.00121.28 ATOM 135 N CYS B 46 118.194 113.139 110.161 1.00118.81 ATOM 136 CA CYS B 46 119.126 112.397 111.003 1.00119.39 ATOM 137 C CYS B 46 118.404 111.253 111.703 1.00120.91 ATOM 138 O CYS B 46 117.434 111.500 112.431 1.00119.35 ATOM 139 CB CYS B 46 119.765 113.328 112.029 1.00119.34 ATOM 140 SG CYS B 46 121.202 112.635 112.878 1.00114.42 ATOM 141 N PRO B 47 118.823 110.001 111.507 1.00123.83 ATOM 142 CA PRO B 47 118.194 108.898 112.251 1.00122.42 ATOM 143 C PRO B 47 118.354 109.021 113.755 1.00123.18 ATOM 144 O PRO B 47 117.447 108.632 114.502 1.00122.33 ATOM 145 CB PRO B 47 118.908 107.654 111.704 1.00121.57 ATOM 146 CG PRO B 47 120.207 108.164 111.171 1.00121.61 ATOM 147 CD PRO B 47 119.917 109.534 110.639 1.00121.58 ATOM 148 N ARG B 48 119.483 109.554 114.223 1.00121.10 ATOM 149 CA ARG B 48 119.717 109.732 115.649 1.00119.95 ATOM 150 C ARG B 48 119.014 110.957 116.218 1.00119.34 ATOM 151 O ARG B 48 118.941 111.094 117.444 1.00117.49 ATOM 152 CB ARG B 48 121.220 109.827 115.925 1.00120.39 ATOM 153 CG ARG B 48 121.902 108.482 116.109 1.00118.21 ATOM 154 CD ARG B 48 123.329 108.502 115.586 1.00119.23 ATOM 155 NE ARG B 48 123.424 109.117 114.267 1.00119.96 ATOM 156 CZ ARG B 48 124.523 109.134 113.526 1.00118.86 ATOM 157 NH1 ARG B 48 125.648 108.577 113.945 1.00118.42 ATOM 158 NH2 ARG B 48 124.494 109.724 112.335 1.00118.86 ATOM 159 N GLY B 49 118.499 111.842 115.368 1.00117.01 ATOM 160 CA GLY B 49 117.785 113.011 115.823 1.00116.39 ATOM 161 C GLY B 49 118.710 114.147 116.205 1.00116.83 ATOM 162 O GLY B 49 119.921 114.102 115.967 1.00116.41 ATOM 163 N PRO B 50 118.148 115.201 116.802 1.00114.85 ATOM 164 CA PRO B 50 118.981 116.342 117.216 1.00114.33 ATOM 165 C PRO B 50 120.018 115.991 118.268 1.00115.01 ATOM 166 O PRO B 50 121.026 116.701 118.381 1.00112.06 ATOM 167 CB PRO B 50 117.955 117.350 117.752 1.00112.09 ATOM 168 CG PRO B 50 116.767 116.524 118.125 1.00112.25 ATOM 169 CD PRO B 50 116.728 115.395 117.140 1.00113.09 ATOM 170 N LEU B 51 119.809 114.927 119.040 1.00111.27 ATOM 171 CA LEU B 51 120.772 114.502 120.056 1.00109.30 ATOM 172 C LEU B 51 121.759 113.494 119.463 1.00107.45 ATOM 173 O LEU B 51 121.948 112.385 119.961 1.00106.10 ATOM 174 CB LEU B 51 120.050 113.924 121.270 1.00107.15 ATOM 175 CG LEU B 51 118.975 114.755 121.983 1.00108.30 ATOM 176 CD1 LEU B 51 119.405 116.212 122.118 1.00107.34 ATOM 177 CD2 LEU B 51 117.606 114.640 121.315 1.00107.91 ATOM 178 N CYS B 52 122.396 113.910 118.371 1.00111.15 ATOM 179 CA CYS B 52 123.331 113.067 117.646 1.00110.51 ATOM 180 C CYS B 52 124.747 113.592 117.809 1.00109.40 ATOM 181 O CYS B 52 124.999 114.771 117.526 1.00108.43 ATOM 182 CB CYS B 52 122.966 113.009 116.159 1.00111.62 ATOM 183 SG CYS B 52 124.209 112.221 115.115 1.00118.52 ATOM 184 N PRO B 53 125.688 112.761 118.266 1.00105.81 ATOM 185 CA PRO B 53 127.073 113.236 118.413 1.00105.72 ATOM 186 C PRO B 53 127.687 113.717 117.112 1.00105.11 ATOM 187 O PRO B 53 128.510 114.641 117.131 1.00104.94 ATOM 188 CB PRO B 53 127.808 112.006 118.966 1.00105.28 ATOM 189 CG PRO B 53 126.954 110.843 118.582 1.00106.87 ATOM 190 CD PRO B 53 125.544 111.342 118.629 1.00105.94 ATOM 191 N LYS B 54 127.318 113.117 115.984 1.00101.73 ATOM 192 CA LYS B 54 127.806 113.586 114.696 1.00 99.10 ATOM 193 C LYS B 54 127.252 114.974 114.394 1.00101.29 ATOM 194 O LYS B 54 126.114 115.305 114.738 1.00101.40 ATOM 195 CB LYS B 54 127.420 112.608 113.589 1.00 99.46 ATOM 196 N LYS B 55 128.076 115.789 113.742 1.00103.20 ATOM 197 CA LYS B 55 127.772 117.201 113.560 1.00103.04 ATOM 198 C LYS B 55 126.725 117.407 112.472 1.00103.41 ATOM 199 O LYS B 55 126.840 116.858 111.372 1.00105.33 ATOM 200 CB LYS B 55 129.045 117.967 113.208 1.00101.25 ATOM 201 CG LYS B 55 128.825 119.434 112.905 1.00 99.82 ATOM 202 CD LYS B 55 130.141 120.139 112.634 1.00 99.61 ATOM 203 CE LYS B 55 131.244 119.631 113.547 1.00 99.67 ATOM 204 NZ LYS B 55 132.245 120.684 113.856 1.00 99.82 ATOM 205 N HIS B 56 125.709 118.206 112.782 1.00107.95 ATOM 206 CA HIS B 56 124.748 118.661 111.790 1.00108.27 ATOM 207 C HIS B 56 125.156 120.034 111.272 1.00109.14 ATOM 208 O HIS B 56 125.810 120.813 111.970 1.00111.52 ATOM 209 CB HIS B 56 123.339 118.721 112.381 1.00107.90 ATOM 210 CG HIS B 56 122.812 117.392 112.822 1.00110.94 ATOM 211 ND1 HIS B 56 121.738 117.263 113.675 1.00110.29 ATOM 212 CD2 HIS B 56 123.210 116.132 112.525 1.00112.65 ATOM 213 CE1 HIS B 56 121.497 115.981 113.886 1.00112.71 ATOM 214 NE2 HIS B 56 122.376 115.273 113.200 1.00113.50 ATOM 215 N VAL B 57 124.767 120.325 110.033 1.00101.10 ATOM 216 CA VAL B 57 125.146 121.565 109.366 1.00100.52 ATOM 217 C VAL B 57 123.880 122.269 108.898 1.00101.01 ATOM 218 O VAL B 57 123.082 121.689 108.152 1.00101.72 ATOM 219 CB VAL B 57 126.095 121.317 108.181 1.00100.24 ATOM 220 CG1 VAL B 57 126.409 122.623 107.475 1.00 98.41 ATOM 221 CG2 VAL B 57 127.371 120.643 108.657 1.00101.63 ATOM 222 N LEU B 58 123.701 123.512 109.333 1.00104.67 ATOM 223 CA LEU B 58 122.575 124.311 108.884 1.00103.03 ATOM 224 C LEU B 58 122.775 124.717 107.423 1.00105.12 ATOM 225 O LEU B 58 123.909 124.798 106.945 1.00105.89 ATOM 226 CB LEU B 58 122.429 125.556 109.756 1.00102.52 ATOM 227 CG LEU B 58 121.462 125.495 110.944 1.00102.98 ATOM 228 CD1 LEU B 58 121.067 126.898 111.382 1.00102.49 ATOM 229 CD2 LEU B 58 120.230 124.660 110.629 1.00103.14 ATOM 230 N PRO B 59 121.688 124.974 106.689 1.00105.55 ATOM 231 CA PRO B 59 121.840 125.392 105.284 1.00103.80 ATOM 232 C PRO B 59 122.598 126.695 105.117 1.00102.12 ATOM 233 O PRO B 59 123.119 126.957 104.026 1.00101.26 ATOM 234 CB PRO B 59 120.390 125.518 104.795 1.00102.79 ATOM 235 CG PRO B 59 119.579 125.685 106.036 1.00102.19 ATOM 236 CD PRO B 59 120.272 124.867 107.077 1.00102.58 TER