HEADER DNA BINDING PROTEIN 31-DEC-69 8A4I TITLE Crystal structure of SALL4 zinc finger cluster 4 with AT-rich DNA COMPND MOL_ID: 2; COMPND 2 MOLECULE: DNA (5'-D(*GP*AP*TP*AP*TP*TP*AP*AP*TP*AP*TP*C)-3'); COMPND 3 CHAIN: A, B, E, F, G, H, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 1; COMPND 6 Sal-like protein 4; COMPND 7 CHAIN: I, J, K, L; COMPND 8 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 2.76 ANGSTORMS DBREF 8A4I C 1 12 PDB 8A4I 8A4I 1 12 DBREF 8A4I L 871 940 UNP Q8BX22 SALL4_MOUSE 871 940 SEQRES 1 L 29 GLU LYS PRO PHE VAL CYS ASN ILE CYS GLY ARG ALA PHE SEQRES 2 L 29 THR THR LYS GLY ASN LEU LYS VAL HIS TYR MET THR HIS SEQRES 3 L 29 GLY ALA ASN ATOM 1 N GLU L 905 -16.764 -22.384 -14.628 1.00 57.02 ATOM 2 CA GLU L 905 -16.020 -21.133 -14.607 1.00 60.62 ATOM 3 C GLU L 905 -14.607 -21.330 -15.141 1.00 54.96 ATOM 4 O GLU L 905 -13.842 -22.135 -14.600 1.00 45.68 ATOM 5 CB GLU L 905 -15.986 -20.604 -13.180 1.00 60.55 ATOM 6 CG GLU L 905 -15.347 -19.250 -13.031 1.00 60.55 ATOM 7 CD GLU L 905 -15.972 -18.466 -11.902 1.00 60.55 ATOM 8 OE1 GLU L 905 -16.913 -18.997 -11.272 1.00 60.55 ATOM 9 OE2 GLU L 905 -15.537 -17.322 -11.647 1.00 60.55 ATOM 10 N LYS L 906 -14.260 -20.602 -16.196 1.00 48.05 ATOM 11 CA LYS L 906 -12.922 -20.653 -16.790 1.00 48.15 ATOM 12 C LYS L 906 -12.317 -19.260 -16.788 1.00 49.03 ATOM 13 O LYS L 906 -12.228 -18.587 -17.833 1.00 64.30 ATOM 14 CB LYS L 906 -12.968 -21.249 -18.195 1.00 51.53 ATOM 15 CG LYS L 906 -13.148 -22.760 -18.209 1.00 51.53 ATOM 16 CD LYS L 906 -14.302 -23.184 -19.110 1.00 51.53 ATOM 17 CE LYS L 906 -13.955 -23.043 -20.581 1.00 51.53 ATOM 18 N PRO L 907 -11.875 -18.771 -15.630 1.00 51.80 ATOM 19 CA PRO L 907 -11.410 -17.387 -15.513 1.00 48.86 ATOM 20 C PRO L 907 -10.036 -17.125 -16.119 1.00 53.97 ATOM 21 O PRO L 907 -9.656 -15.952 -16.257 1.00 58.32 ATOM 22 CB PRO L 907 -11.408 -17.134 -14.002 1.00 54.56 ATOM 23 CG PRO L 907 -11.227 -18.457 -13.397 1.00 54.56 ATOM 24 CD PRO L 907 -11.871 -19.467 -14.323 1.00 54.56 ATOM 25 N PHE L 908 -9.282 -18.160 -16.487 1.00 49.64 ATOM 26 CA PHE L 908 -7.919 -17.958 -16.966 1.00 49.52 ATOM 27 C PHE L 908 -7.938 -17.742 -18.473 1.00 55.66 ATOM 28 O PHE L 908 -8.248 -18.658 -19.246 1.00 50.76 ATOM 29 CB PHE L 908 -7.037 -19.149 -16.597 1.00 51.11 ATOM 30 CG PHE L 908 -6.914 -19.374 -15.119 1.00 51.11 ATOM 31 CD1 PHE L 908 -5.986 -18.667 -14.375 1.00 51.11 ATOM 32 CD2 PHE L 908 -7.724 -20.295 -14.473 1.00 51.11 ATOM 33 CE1 PHE L 908 -5.870 -18.871 -13.010 1.00 51.11 ATOM 34 CE2 PHE L 908 -7.610 -20.507 -13.108 1.00 51.11 ATOM 35 CZ PHE L 908 -6.682 -19.794 -12.373 1.00 51.11 ATOM 36 N VAL L 909 -7.589 -16.525 -18.882 1.00 44.98 ATOM 37 CA VAL L 909 -7.736 -16.070 -20.257 1.00 50.59 ATOM 38 C VAL L 909 -6.380 -15.930 -20.935 1.00 47.89 ATOM 39 O VAL L 909 -5.412 -15.464 -20.325 1.00 45.14 ATOM 40 CB VAL L 909 -8.494 -14.732 -20.282 1.00 48.80 ATOM 41 CG1 VAL L 909 -8.678 -14.243 -21.707 1.00 48.80 ATOM 42 CG2 VAL L 909 -9.827 -14.875 -19.575 1.00 48.80 ATOM 43 N CYS L 910 -6.320 -16.336 -22.201 1.00 45.89 ATOM 44 CA CYS L 910 -5.136 -16.190 -23.039 1.00 43.98 ATOM 45 C CYS L 910 -5.089 -14.782 -23.629 1.00 50.69 ATOM 46 O CYS L 910 -6.072 -14.325 -24.218 1.00 51.54 ATOM 47 CB CYS L 910 -5.151 -17.235 -24.156 1.00 46.80 ATOM 48 SG CYS L 910 -3.645 -17.319 -25.184 1.00 48.32 ATOM 49 N ASN L 911 -3.953 -14.091 -23.471 1.00 47.43 ATOM 50 CA ASN L 911 -3.832 -12.736 -24.011 1.00 43.83 ATOM 51 C ASN L 911 -3.821 -12.698 -25.532 1.00 52.02 ATOM 52 O ASN L 911 -3.853 -11.605 -26.108 1.00 52.72 ATOM 53 CB ASN L 911 -2.542 -12.061 -23.533 1.00 55.33 ATOM 54 CG ASN L 911 -2.714 -11.284 -22.244 1.00 55.33 ATOM 55 OD1 ASN L 911 -3.823 -10.893 -21.879 1.00 55.33 ATOM 56 ND2 ASN L 911 -1.602 -11.041 -21.549 1.00 55.33 ATOM 57 N ILE L 912 -3.792 -13.850 -26.193 1.00 50.20 ATOM 58 CA ILE L 912 -3.673 -13.903 -27.642 1.00 55.25 ATOM 59 C ILE L 912 -5.011 -14.233 -28.294 1.00 53.73 ATOM 60 O ILE L 912 -5.590 -13.403 -29.006 1.00 46.84 ATOM 61 CB ILE L 912 -2.588 -14.918 -28.043 1.00 49.24 ATOM 62 CG1 ILE L 912 -1.221 -14.421 -27.570 1.00 49.24 ATOM 63 CG2 ILE L 912 -2.586 -15.130 -29.553 1.00 49.24 ATOM 64 CD1 ILE L 912 -0.156 -15.492 -27.518 1.00 49.24 ATOM 65 N CYS L 913 -5.503 -15.450 -28.060 1.00 61.98 ATOM 66 CA CYS L 913 -6.693 -15.958 -28.726 1.00 64.01 ATOM 67 C CYS L 913 -7.987 -15.784 -27.938 1.00 46.49 ATOM 68 O CYS L 913 -9.057 -16.032 -28.495 1.00 42.05 ATOM 69 CB CYS L 913 -6.490 -17.439 -29.067 1.00 44.28 ATOM 70 SG CYS L 913 -6.376 -18.551 -27.630 1.00 60.68 ATOM 71 N GLY L 914 -7.932 -15.353 -26.682 1.00 53.17 ATOM 72 CA GLY L 914 -9.143 -15.189 -25.898 1.00 56.16 ATOM 73 C GLY L 914 -9.717 -16.469 -25.338 1.00 54.20 ATOM 74 O GLY L 914 -10.812 -16.445 -24.762 1.00 50.70 ATOM 75 N ARG L 915 -9.004 -17.583 -25.476 1.00 65.34 ATOM 76 CA ARG L 915 -9.451 -18.860 -24.938 1.00 62.60 ATOM 77 C ARG L 915 -9.478 -18.836 -23.412 1.00 59.06 ATOM 78 O ARG L 915 -8.653 -18.184 -22.763 1.00 45.90 ATOM 79 CB ARG L 915 -8.549 -19.993 -25.422 1.00 56.12 ATOM 80 N ALA L 916 -10.459 -19.535 -22.839 1.00 64.96 ATOM 81 CA ALA L 916 -10.664 -19.552 -21.398 1.00 60.40 ATOM 82 C ALA L 916 -10.322 -20.929 -20.843 1.00 52.66 ATOM 83 O ALA L 916 -10.502 -21.949 -21.515 1.00 51.27 ATOM 84 CB ALA L 916 -12.107 -19.187 -21.043 1.00 54.56 ATOM 85 N PHE L 917 -9.803 -20.949 -19.613 1.00 52.82 ATOM 86 CA PHE L 917 -9.274 -22.173 -19.028 1.00 49.48 ATOM 87 C PHE L 917 -9.654 -22.292 -17.563 1.00 51.49 ATOM 88 O PHE L 917 -9.824 -21.296 -16.854 1.00 54.52 ATOM 89 CB PHE L 917 -7.746 -22.264 -19.189 1.00 53.35 ATOM 90 CG PHE L 917 -7.300 -22.367 -20.617 1.00 53.35 ATOM 91 CD1 PHE L 917 -7.226 -21.247 -21.425 1.00 53.35 ATOM 92 CD2 PHE L 917 -6.976 -23.604 -21.158 1.00 53.35 ATOM 93 CE1 PHE L 917 -6.841 -21.355 -22.739 1.00 53.35 ATOM 94 CE2 PHE L 917 -6.584 -23.716 -22.477 1.00 53.35 ATOM 95 CZ PHE L 917 -6.528 -22.591 -23.268 1.00 53.35 ATOM 96 N THR L 918 -9.742 -23.542 -17.116 1.00 51.13 ATOM 97 CA THR L 918 -10.138 -23.841 -15.749 1.00 57.09 ATOM 98 C THR L 918 -9.020 -23.569 -14.747 1.00 46.70 ATOM 99 O THR L 918 -9.259 -22.973 -13.695 1.00 39.09 ATOM 100 CB THR L 918 -10.571 -25.298 -15.669 1.00 51.50 ATOM 101 OG1 THR L 918 -11.072 -25.711 -16.947 1.00 51.50 ATOM 102 CG2 THR L 918 -11.646 -25.475 -14.619 1.00 51.50 ATOM 103 N THR L 919 -7.804 -24.015 -15.046 1.00 42.77 ATOM 104 CA THR L 919 -6.667 -23.934 -14.139 1.00 42.86 ATOM 105 C THR L 919 -5.658 -22.898 -14.623 1.00 51.36 ATOM 106 O THR L 919 -5.575 -22.604 -15.818 1.00 53.92 ATOM 107 CB THR L 919 -5.981 -25.304 -14.010 1.00 47.65 ATOM 108 OG1 THR L 919 -6.972 -26.341 -13.940 1.00 47.65 ATOM 109 CG2 THR L 919 -5.116 -25.368 -12.754 1.00 47.65 ATOM 110 N LYS L 920 -4.904 -22.331 -13.679 1.00 51.31 ATOM 111 CA LYS L 920 -3.756 -21.508 -14.051 1.00 45.12 ATOM 112 C LYS L 920 -2.722 -22.342 -14.799 1.00 49.42 ATOM 113 O LYS L 920 -2.096 -21.868 -15.755 1.00 54.56 ATOM 114 CB LYS L 920 -3.131 -20.881 -12.800 1.00 48.59 ATOM 115 CG LYS L 920 -2.017 -19.877 -13.082 1.00 48.59 ATOM 116 CD LYS L 920 -0.937 -19.962 -12.028 1.00 48.59 ATOM 117 CE LYS L 920 -0.315 -21.353 -11.988 1.00 48.59 ATOM 118 NZ LYS L 920 0.979 -21.365 -11.254 1.00 48.59 ATOM 119 N GLY L 921 -2.528 -23.589 -14.365 1.00 43.93 ATOM 120 CA GLY L 921 -1.557 -24.459 -15.007 1.00 46.23 ATOM 121 C GLY L 921 -1.952 -24.817 -16.425 1.00 51.25 ATOM 122 O GLY L 921 -1.100 -24.912 -17.312 1.00 54.70 ATOM 123 N ASN L 922 -3.241 -25.082 -16.640 1.00 48.89 ATOM 124 CA ASN L 922 -3.725 -25.356 -17.988 1.00 54.99 ATOM 125 C ASN L 922 -3.422 -24.188 -18.918 1.00 44.62 ATOM 126 O ASN L 922 -3.018 -24.392 -20.067 1.00 47.31 ATOM 127 CB ASN L 922 -5.230 -25.630 -17.951 1.00 46.74 ATOM 128 CG ASN L 922 -5.568 -26.950 -17.302 1.00 46.74 ATOM 129 OD1 ASN L 922 -4.690 -27.774 -17.051 1.00 46.74 ATOM 130 ND2 ASN L 922 -6.848 -27.162 -17.029 1.00 46.74 ATOM 131 N LEU L 923 -3.596 -22.953 -18.434 1.00 40.69 ATOM 132 CA LEU L 923 -3.243 -21.783 -19.236 1.00 54.75 ATOM 133 C LEU L 923 -1.738 -21.703 -19.468 1.00 52.76 ATOM 134 O LEU L 923 -1.284 -21.334 -20.562 1.00 44.67 ATOM 135 CB LEU L 923 -3.752 -20.505 -18.566 1.00 46.32 ATOM 136 CG LEU L 923 -3.548 -19.227 -19.387 1.00 46.32 ATOM 137 CD1 LEU L 923 -4.480 -19.216 -20.588 1.00 46.32 ATOM 138 CD2 LEU L 923 -3.741 -17.986 -18.532 1.00 46.32 ATOM 139 N LYS L 924 -0.944 -22.041 -18.448 1.00 50.06 ATOM 140 CA LYS L 924 0.505 -22.042 -18.617 1.00 52.20 ATOM 141 C LYS L 924 0.928 -23.014 -19.714 1.00 50.43 ATOM 142 O LYS L 924 1.817 -22.711 -20.513 1.00 50.02 ATOM 143 CB LYS L 924 1.189 -22.396 -17.295 1.00 54.50 ATOM 144 N VAL L 925 0.318 -24.198 -19.738 1.00 54.35 ATOM 145 CA VAL L 925 0.553 -25.132 -20.843 1.00 47.15 ATOM 146 C VAL L 925 0.115 -24.532 -22.165 1.00 46.35 ATOM 147 O VAL L 925 0.896 -24.469 -23.133 1.00 46.92 ATOM 148 CB VAL L 925 -0.150 -26.475 -20.576 1.00 47.28 ATOM 149 CG1 VAL L 925 -0.278 -27.231 -21.886 1.00 47.28 ATOM 150 CG2 VAL L 925 0.652 -27.287 -19.570 1.00 47.28 ATOM 151 N HIS L 926 -1.150 -24.097 -22.255 1.00 45.58 ATOM 152 CA HIS L 926 -1.719 -23.628 -23.513 1.00 47.53 ATOM 153 C HIS L 926 -0.860 -22.553 -24.161 1.00 54.39 ATOM 154 O HIS L 926 -0.708 -22.528 -25.388 1.00 56.48 ATOM 155 CB HIS L 926 -3.128 -23.087 -23.300 1.00 44.98 ATOM 156 CG HIS L 926 -3.664 -22.325 -24.476 1.00 56.98 ATOM 157 ND1 HIS L 926 -3.900 -22.913 -25.699 1.00 61.91 ATOM 158 CD2 HIS L 926 -4.009 -21.021 -24.612 1.00 63.16 ATOM 159 CE1 HIS L 926 -4.367 -22.005 -26.540 1.00 67.82 ATOM 160 NE2 HIS L 926 -4.442 -20.847 -25.907 1.00 79.05 ATOM 161 N TYR L 927 -0.326 -21.630 -23.355 1.00 42.89 ATOM 162 CA TYR L 927 0.547 -20.603 -23.915 1.00 54.92 ATOM 163 C TYR L 927 1.685 -21.219 -24.718 1.00 62.37 ATOM 164 O TYR L 927 2.096 -20.669 -25.747 1.00 70.79 ATOM 165 CB TYR L 927 1.086 -19.702 -22.808 1.00 50.61 ATOM 166 CG TYR L 927 0.338 -18.399 -22.726 1.00 50.61 ATOM 167 CD1 TYR L 927 0.732 -17.304 -23.482 1.00 50.61 ATOM 168 CD2 TYR L 927 -0.773 -18.265 -21.907 1.00 50.61 ATOM 169 CE1 TYR L 927 0.052 -16.109 -23.415 1.00 50.61 ATOM 170 CE2 TYR L 927 -1.463 -17.072 -21.835 1.00 50.61 ATOM 171 CZ TYR L 927 -1.047 -16.000 -22.592 1.00 50.61 ATOM 172 OH TYR L 927 -1.739 -14.820 -22.518 1.00 50.61 ATOM 173 N MET L 928 2.208 -22.364 -24.266 1.00 58.79 ATOM 174 CA MET L 928 3.269 -23.031 -25.015 1.00 53.57 ATOM 175 C MET L 928 2.839 -23.387 -26.433 1.00 55.72 ATOM 176 O MET L 928 3.687 -23.461 -27.330 1.00 64.44 ATOM 177 CB MET L 928 3.740 -24.283 -24.278 1.00 60.98 ATOM 178 CG MET L 928 4.553 -23.991 -23.029 1.00 60.98 ATOM 179 SD MET L 928 5.758 -22.661 -23.260 1.00 60.98 ATOM 180 CE MET L 928 6.792 -23.300 -24.585 1.00 60.98 ATOM 181 N THR L 929 1.541 -23.622 -26.658 1.00 61.87 ATOM 182 CA THR L 929 1.085 -23.988 -27.995 1.00 59.55 ATOM 183 C THR L 929 1.328 -22.872 -29.001 1.00 63.27 ATOM 184 O THR L 929 1.365 -23.132 -30.210 1.00 62.01 ATOM 185 CB THR L 929 -0.401 -24.353 -27.979 1.00 59.16 ATOM 186 N HIS L 930 1.503 -21.641 -28.527 1.00 54.67 ATOM 187 CA HIS L 930 1.729 -20.489 -29.386 1.00 62.51 ATOM 188 C HIS L 930 3.206 -20.216 -29.633 1.00 69.51 ATOM 189 O HIS L 930 3.531 -19.260 -30.344 1.00 75.01 ATOM 190 CB HIS L 930 1.073 -19.248 -28.774 1.00 66.17 ATOM 191 CG HIS L 930 -0.369 -19.427 -28.435 1.00 62.78 ATOM 192 ND1 HIS L 930 -1.114 -20.502 -28.891 1.00 63.45 ATOM 193 CD2 HIS L 930 -1.220 -18.686 -27.687 1.00 60.00 ATOM 194 CE1 HIS L 930 -2.346 -20.404 -28.445 1.00 58.75 ATOM 195 NE2 HIS L 930 -2.442 -19.306 -27.707 1.00 58.13 ATOM 196 N GLY L 931 4.102 -21.028 -29.075 1.00 67.51 ATOM 197 CA GLY L 931 5.527 -20.815 -29.237 1.00 67.51 ATOM 198 C GLY L 931 6.203 -21.791 -30.179 1.00 67.51 ATOM 199 O GLY L 931 7.181 -21.439 -30.849 1.00 67.51 ATOM 200 N ALA L 932 5.687 -23.015 -30.247 1.00 70.11 ATOM 201 CA ALA L 932 6.297 -24.082 -31.027 1.00 70.11 ATOM 202 C ALA L 932 5.606 -24.243 -32.376 1.00 70.11 ATOM 203 O ALA L 932 4.483 -23.780 -32.588 1.00 70.11 ATOM 204 CB ALA L 932 6.256 -25.407 -30.262 1.00 71.24 ATOM 205 N ASN L 933 6.303 -24.909 -33.291 1.00 73.07 ATOM 206 CA ASN L 933 5.780 -25.163 -34.628 1.00 73.07 ATOM 207 C ASN L 933 5.715 -26.663 -34.903 1.00 73.07 ATOM 208 O ASN L 933 6.333 -27.463 -34.198 1.00 73.07 ATOM 209 CB ASN L 933 6.642 -24.466 -35.681 1.00 70.41 ATOM 210 ZN ZN L1002 -4.247 -18.885 -26.743 1.00 16.29 ATOM 211 MG MG L 102 -2.560 -24.506 -30.686 1.00 4.96 TER