HEADER RIBOSOME 31-DEC-69 8A98 TITLE CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : snoRNA MUTANT COMPND MOL_ID: 79; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: n; EXPDTA ELECTRON MICROSCOPY DBREF 8A98 n 1 34 PDB 8A98 8A98 1 34 SEQRES 1 n 33 GLY THR VAL SER ARG PRO ARG GLY MET ARG PRO LYS TRP SEQRES 2 n 33 HIS LYS LYS ARG ILE LYS ARG LEU LYS LEU ARG ARG ARG SEQRES 3 n 33 ARG MET ARG GLN ARG SER LYS ATOM 1 N GLY n 2 137.937 207.673 214.129 1.00 3.91 ATOM 2 CA GLY n 2 136.945 208.256 215.047 1.00 4.61 ATOM 3 C GLY n 2 137.481 209.477 215.767 1.00 14.23 ATOM 4 O GLY n 2 136.664 210.335 216.160 1.00 17.17 ATOM 5 N THR n 3 138.793 209.549 215.962 1.00 16.11 ATOM 6 CA THR n 3 139.420 210.677 216.705 1.00 13.20 ATOM 7 C THR n 3 139.892 211.804 215.773 1.00 20.72 ATOM 8 O THR n 3 140.449 212.776 216.309 1.00 21.21 ATOM 9 CB THR n 3 140.574 210.158 217.574 1.00 10.05 ATOM 10 OG1 THR n 3 141.694 209.923 216.720 1.00 24.59 ATOM 11 CG2 THR n 3 140.228 208.888 218.317 1.00 9.83 ATOM 12 N VAL n 4 139.708 211.694 214.449 1.00 23.56 ATOM 13 CA VAL n 4 140.314 212.723 213.538 1.00 23.22 ATOM 14 C VAL n 4 139.355 213.257 212.457 1.00 21.37 ATOM 15 O VAL n 4 138.423 212.521 212.086 1.00 20.98 ATOM 16 CB VAL n 4 141.616 212.187 212.902 1.00 15.03 ATOM 17 CG1 VAL n 4 141.391 211.603 211.517 1.00 20.09 ATOM 18 CG2 VAL n 4 142.709 213.243 212.872 1.00 17.00 ATOM 19 N SER n 5 139.582 214.471 211.937 1.00 26.71 ATOM 20 CA SER n 5 138.709 215.063 210.881 1.00 32.59 ATOM 21 C SER n 5 139.013 214.429 209.517 1.00 30.71 ATOM 22 O SER n 5 139.654 213.366 209.498 1.00 29.50 ATOM 23 CB SER n 5 138.833 216.568 210.835 1.00 50.00 ATOM 24 OG SER n 5 139.879 216.966 209.962 1.00 50.00 ATOM 25 N ARG n 6 138.636 215.080 208.411 1.00 30.92 ATOM 26 CA ARG n 6 138.819 214.403 207.099 1.00 34.44 ATOM 27 C ARG n 6 140.188 214.766 206.527 1.00 37.55 ATOM 28 O ARG n 6 140.399 215.935 206.172 1.00 37.84 ATOM 29 CB ARG n 6 137.720 214.837 206.127 1.00 35.93 ATOM 30 CG ARG n 6 137.886 214.276 204.722 1.00 39.81 ATOM 31 CD ARG n 6 136.562 214.055 204.018 1.00 34.79 ATOM 32 NE ARG n 6 135.678 215.208 204.120 1.00 36.47 ATOM 33 CZ ARG n 6 134.354 215.149 204.028 1.00 39.32 ATOM 34 NH1 ARG n 6 133.755 213.985 203.835 1.00 40.93 ATOM 35 NH2 ARG n 6 133.634 216.252 204.132 1.00 35.85 ATOM 36 N PRO n 7 141.114 213.789 206.418 1.00 32.29 ATOM 37 CA PRO n 7 142.478 214.046 205.926 1.00 36.68 ATOM 38 C PRO n 7 142.691 214.502 204.480 1.00 37.87 ATOM 39 O PRO n 7 143.553 215.337 204.290 1.00 38.20 ATOM 40 CB PRO n 7 143.115 212.647 205.972 1.00 37.99 ATOM 41 CG PRO n 7 141.947 211.696 205.893 1.00 37.06 ATOM 42 CD PRO n 7 140.878 212.377 206.717 1.00 33.06 ATOM 43 N ARG n 8 141.971 213.903 203.528 1.00 40.61 ATOM 44 CA ARG n 8 142.204 214.147 202.076 1.00 41.71 ATOM 45 C ARG n 8 143.286 213.129 201.705 1.00 41.55 ATOM 46 O ARG n 8 143.983 212.671 202.628 1.00 39.92 ATOM 47 CB ARG n 8 142.593 215.592 201.745 1.00 50.00 ATOM 48 N GLY n 9 143.452 212.781 200.434 1.00 34.13 ATOM 49 CA GLY n 9 144.569 211.884 200.085 1.00 31.13 ATOM 50 C GLY n 9 144.516 210.606 200.905 1.00 34.56 ATOM 51 O GLY n 9 143.411 210.132 201.157 1.00 38.90 ATOM 52 N MET n 10 145.648 210.174 201.467 1.00 29.41 ATOM 53 CA MET n 10 145.703 208.889 202.213 1.00 19.98 ATOM 54 C MET n 10 146.449 209.109 203.532 1.00 25.91 ATOM 55 O MET n 10 147.237 210.066 203.593 1.00 28.42 ATOM 56 CB MET n 10 146.416 207.819 201.385 1.00 18.69 ATOM 57 CG MET n 10 147.622 208.339 200.628 1.00 23.36 ATOM 58 SD MET n 10 149.193 207.827 201.371 1.00 38.91 ATOM 59 CE MET n 10 149.493 206.294 200.495 1.00 22.77 ATOM 60 N ARG n 11 146.186 208.281 204.549 1.00 18.97 ATOM 61 CA ARG n 11 146.824 208.449 205.889 1.00 18.35 ATOM 62 C ARG n 11 148.154 209.202 205.746 1.00 17.88 ATOM 63 O ARG n 11 149.071 208.660 205.105 1.00 23.66 ATOM 64 CB ARG n 11 146.989 207.096 206.586 1.00 19.60 ATOM 65 CG ARG n 11 146.902 207.180 208.103 1.00 14.20 ATOM 66 CD ARG n 11 147.480 205.965 208.798 1.00 8.27 ATOM 67 NE ARG n 11 148.177 206.333 210.019 1.00 17.69 ATOM 68 CZ ARG n 11 148.090 205.668 211.163 1.00 15.69 ATOM 69 NH1 ARG n 11 147.332 204.589 211.243 1.00 23.21 ATOM 70 NH2 ARG n 11 148.763 206.081 212.221 1.00 9.58 ATOM 71 N PRO n 12 148.311 210.396 206.360 1.00 14.99 ATOM 72 CA PRO n 12 149.501 211.249 206.192 1.00 21.50 ATOM 73 C PRO n 12 150.817 210.572 206.539 1.00 23.86 ATOM 74 O PRO n 12 151.835 210.869 205.906 1.00 18.71 ATOM 75 CB PRO n 12 149.210 212.436 207.120 1.00 13.21 ATOM 76 CG PRO n 12 147.732 212.436 207.284 1.00 12.54 ATOM 77 CD PRO n 12 147.331 210.999 207.275 1.00 17.46 ATOM 78 N LYS n 13 150.832 209.669 207.519 1.00 18.67 ATOM 79 CA LYS n 13 152.067 208.964 207.850 1.00 12.77 ATOM 80 C LYS n 13 152.531 208.088 206.690 1.00 24.59 ATOM 81 O LYS n 13 153.727 208.041 206.374 1.00 25.22 ATOM 82 CB LYS n 13 151.857 208.150 209.126 1.00 19.85 ATOM 83 CG LYS n 13 152.784 206.981 209.333 1.00 15.71 ATOM 84 CD LYS n 13 152.261 206.083 210.434 1.00 11.07 ATOM 85 CE LYS n 13 152.347 206.756 211.783 1.00 9.53 ATOM 86 NZ LYS n 13 152.892 205.821 212.801 1.00 6.18 ATOM 87 N TRP n 14 151.596 207.414 206.017 1.00 26.01 ATOM 88 CA TRP n 14 151.966 206.615 204.853 1.00 21.98 ATOM 89 C TRP n 14 152.378 207.492 203.677 1.00 24.74 ATOM 90 O TRP n 14 153.272 207.124 202.904 1.00 25.84 ATOM 91 CB TRP n 14 150.822 205.691 204.458 1.00 16.05 ATOM 92 CG TRP n 14 150.258 204.850 205.578 1.00 18.63 ATOM 93 CD1 TRP n 14 148.949 204.549 205.773 1.00 15.40 ATOM 94 CD2 TRP n 14 150.982 204.183 206.625 1.00 17.07 ATOM 95 NE1 TRP n 14 148.804 203.753 206.874 1.00 15.32 ATOM 96 CE2 TRP n 14 150.037 203.514 207.417 1.00 10.53 ATOM 97 CE3 TRP n 14 152.334 204.094 206.974 1.00 15.16 ATOM 98 CZ2 TRP n 14 150.393 202.774 208.533 1.00 10.59 ATOM 99 CZ3 TRP n 14 152.686 203.358 208.089 1.00 13.00 ATOM 100 CH2 TRP n 14 151.721 202.708 208.852 1.00 12.59 ATOM 101 N HIS n 15 151.744 208.656 203.522 1.00 24.41 ATOM 102 CA HIS n 15 152.192 209.588 202.489 1.00 25.40 ATOM 103 C HIS n 15 153.635 210.023 202.732 1.00 19.56 ATOM 104 O HIS n 15 154.459 210.040 201.803 1.00 22.33 ATOM 105 CB HIS n 15 151.258 210.797 202.443 1.00 23.26 ATOM 106 CG HIS n 15 151.675 211.853 201.468 1.00 23.28 ATOM 107 ND1 HIS n 15 151.455 211.742 200.113 1.00 26.61 ATOM 108 CD2 HIS n 15 152.282 213.047 201.654 1.00 24.69 ATOM 109 CE1 HIS n 15 151.921 212.818 199.504 1.00 28.50 ATOM 110 NE2 HIS n 15 152.428 213.626 200.418 1.00 19.89 ATOM 111 N LYS n 16 153.961 210.354 203.984 1.00 21.33 ATOM 112 CA LYS n 16 155.332 210.711 204.335 1.00 24.55 ATOM 113 C LYS n 16 156.296 209.561 204.060 1.00 22.34 ATOM 114 O LYS n 16 157.424 209.783 203.607 1.00 31.71 ATOM 115 CB LYS n 16 155.406 211.130 205.800 1.00 18.25 ATOM 116 CG LYS n 16 156.821 211.385 206.298 1.00 29.17 ATOM 117 CD LYS n 16 156.852 212.500 207.335 1.00 29.29 ATOM 118 CE LYS n 16 157.285 211.984 208.695 1.00 25.11 ATOM 119 NZ LYS n 16 157.436 213.091 209.672 1.00 27.37 ATOM 120 N LYS n 17 155.878 208.327 204.342 1.00 19.06 ATOM 121 CA LYS n 17 156.750 207.187 204.069 1.00 17.51 ATOM 122 C LYS n 17 157.020 207.038 202.569 1.00 20.53 ATOM 123 O LYS n 17 158.146 206.719 202.155 1.00 23.08 ATOM 124 CB LYS n 17 156.137 205.914 204.651 1.00 18.84 ATOM 125 CG LYS n 17 157.125 204.799 204.898 1.00 15.52 ATOM 126 CD LYS n 17 156.424 203.465 204.956 1.00 21.13 ATOM 127 CE LYS n 17 156.519 202.837 206.333 1.00 20.22 ATOM 128 NZ LYS n 17 157.784 202.081 206.505 1.00 12.29 ATOM 129 N ARG n 18 155.998 207.273 201.742 1.00 23.68 ATOM 130 CA ARG n 18 156.188 207.272 200.291 1.00 20.20 ATOM 131 C ARG n 18 157.212 208.319 199.860 1.00 25.57 ATOM 132 O ARG n 18 158.114 208.036 199.058 1.00 24.84 ATOM 133 CB ARG n 18 154.853 207.522 199.590 1.00 19.91 ATOM 134 CG ARG n 18 154.177 206.280 199.075 1.00 25.00 ATOM 135 CD ARG n 18 153.493 206.555 197.757 1.00 23.63 ATOM 136 NE ARG n 18 152.233 205.837 197.628 1.00 23.02 ATOM 137 CZ ARG n 18 151.198 206.272 196.927 1.00 23.50 ATOM 138 NH1 ARG n 18 151.227 207.438 196.309 1.00 23.34 ATOM 139 NH2 ARG n 18 150.103 205.522 196.854 1.00 27.62 ATOM 140 N ILE n 19 157.082 209.540 200.382 1.00 19.73 ATOM 141 CA ILE n 19 158.021 210.601 200.015 1.00 19.61 ATOM 142 C ILE n 19 159.438 210.243 200.460 1.00 27.83 ATOM 143 O ILE n 19 160.421 210.521 199.757 1.00 20.94 ATOM 144 CB ILE n 19 157.563 211.948 200.600 1.00 18.51 ATOM 145 CG1 ILE n 19 156.089 212.206 200.284 1.00 21.76 ATOM 146 CG2 ILE n 19 158.419 213.078 200.071 1.00 21.64 ATOM 147 CD1 ILE n 19 155.829 212.746 198.900 1.00 24.28 ATOM 148 N LYS n 20 159.564 209.618 201.630 1.00 17.66 ATOM 149 CA LYS n 20 160.871 209.199 202.130 1.00 26.77 ATOM 150 C LYS n 20 161.539 208.199 201.187 1.00 16.84 ATOM 151 O LYS n 20 162.726 208.331 200.851 1.00 17.73 ATOM 152 CB LYS n 20 160.697 208.605 203.526 1.00 26.89 ATOM 153 CG LYS n 20 161.967 208.264 204.250 1.00 17.93 ATOM 154 CD LYS n 20 161.657 207.375 205.442 1.00 18.94 ATOM 155 CE LYS n 20 162.182 207.959 206.740 1.00 20.77 ATOM 156 NZ LYS n 20 161.451 209.178 207.166 1.00 19.46 ATOM 157 N ARG n 21 160.785 207.191 200.740 1.00 25.36 ATOM 158 CA ARG n 21 161.348 206.218 199.802 1.00 25.60 ATOM 159 C ARG n 21 161.742 206.877 198.480 1.00 29.67 ATOM 160 O ARG n 21 162.789 206.550 197.899 1.00 28.67 ATOM 161 CB ARG n 21 160.354 205.085 199.559 1.00 21.37 ATOM 162 N LEU n 22 160.914 207.805 197.990 1.00 33.17 ATOM 163 CA LEU n 22 161.253 208.533 196.767 1.00 27.38 ATOM 164 C LEU n 22 162.577 209.276 196.909 1.00 27.09 ATOM 165 O LEU n 22 163.427 209.235 196.009 1.00 36.25 ATOM 166 CB LEU n 22 160.135 209.513 196.416 1.00 27.71 ATOM 167 CG LEU n 22 159.978 209.958 194.964 1.00 29.39 ATOM 168 CD1 LEU n 22 159.902 208.779 194.003 1.00 31.94 ATOM 169 CD2 LEU n 22 158.738 210.814 194.863 1.00 27.38 ATOM 170 N LYS n 23 162.763 209.975 198.032 1.00 28.22 ATOM 171 CA LYS n 23 164.004 210.717 198.233 1.00 24.43 ATOM 172 C LYS n 23 165.202 209.784 198.290 1.00 28.54 ATOM 173 O LYS n 23 166.273 210.109 197.768 1.00 28.82 ATOM 174 CB LYS n 23 163.929 211.554 199.504 1.00 18.36 ATOM 175 CG LYS n 23 163.153 212.824 199.335 1.00 23.50 ATOM 176 CD LYS n 23 162.687 213.352 200.666 1.00 22.98 ATOM 177 CE LYS n 23 163.705 214.269 201.283 1.00 27.67 ATOM 178 NZ LYS n 23 163.198 214.830 202.560 1.00 26.68 ATOM 179 N LEU n 24 165.049 208.624 198.931 1.00 29.50 ATOM 180 CA LEU n 24 166.157 207.672 198.958 1.00 27.42 ATOM 181 C LEU n 24 166.535 207.229 197.547 1.00 32.68 ATOM 182 O LEU n 24 167.725 207.167 197.200 1.00 28.71 ATOM 183 CB LEU n 24 165.799 206.469 199.832 1.00 25.28 ATOM 184 CG LEU n 24 166.925 205.814 200.639 1.00 26.33 ATOM 185 CD1 LEU n 24 166.381 204.882 201.706 1.00 26.38 ATOM 186 CD2 LEU n 24 167.886 205.063 199.751 1.00 28.59 ATOM 187 N ARG n 25 165.535 206.935 196.710 1.00 31.65 ATOM 188 CA ARG n 25 165.833 206.506 195.344 1.00 25.91 ATOM 189 C ARG n 25 166.537 207.606 194.553 1.00 33.33 ATOM 190 O ARG n 25 167.488 207.335 193.804 1.00 28.63 ATOM 191 CB ARG n 25 164.554 206.071 194.636 1.00 19.95 ATOM 192 N ARG n 26 166.079 208.851 194.698 1.00 32.37 ATOM 193 CA ARG n 26 166.734 209.957 194.005 1.00 29.03 ATOM 194 C ARG n 26 168.177 210.117 194.464 1.00 36.23 ATOM 195 O ARG n 26 169.077 210.365 193.650 1.00 33.93 ATOM 196 CB ARG n 26 165.966 211.255 194.234 1.00 27.64 ATOM 197 CG ARG n 26 164.607 211.309 193.582 1.00 27.18 ATOM 198 CD ARG n 26 163.967 212.657 193.814 1.00 29.56 ATOM 199 NE ARG n 26 162.641 212.744 193.221 1.00 23.63 ATOM 200 CZ ARG n 26 161.602 213.328 193.797 1.00 22.90 ATOM 201 NH1 ARG n 26 161.697 213.878 194.993 1.00 28.78 ATOM 202 NH2 ARG n 26 160.436 213.351 193.161 1.00 29.18 ATOM 203 N ARG n 27 168.411 209.993 195.772 1.00 36.37 ATOM 204 CA ARG n 27 169.766 210.078 196.304 1.00 32.13 ATOM 205 C ARG n 27 170.661 209.019 195.674 1.00 32.47 ATOM 206 O ARG n 27 171.795 209.306 195.271 1.00 41.39 ATOM 207 CB ARG n 27 169.722 209.936 197.828 1.00 29.86 ATOM 208 CG ARG n 27 171.059 209.986 198.536 1.00 31.01 ATOM 209 CD ARG n 27 170.888 210.357 200.010 1.00 32.20 ATOM 210 NE ARG n 27 170.262 209.297 200.790 1.00 35.66 ATOM 211 CZ ARG n 27 169.276 209.480 201.659 1.00 31.26 ATOM 212 NH1 ARG n 27 168.779 210.681 201.900 1.00 31.39 ATOM 213 NH2 ARG n 27 168.774 208.429 202.300 1.00 28.48 ATOM 214 N ARG n 28 170.152 207.791 195.549 1.00 32.43 ATOM 215 CA ARG n 28 170.944 206.724 194.938 1.00 38.15 ATOM 216 C ARG n 28 171.249 207.011 193.467 1.00 37.22 ATOM 217 O ARG n 28 172.372 206.777 193.004 1.00 37.90 ATOM 218 CB ARG n 28 170.228 205.381 195.086 1.00 32.12 ATOM 219 N MET n 29 170.260 207.495 192.710 1.00 38.22 ATOM 220 CA MET n 29 170.499 207.790 191.295 1.00 36.27 ATOM 221 C MET n 29 171.545 208.888 191.120 1.00 39.48 ATOM 222 O MET n 29 172.444 208.780 190.271 1.00 31.57 ATOM 223 CB MET n 29 169.193 208.187 190.608 1.00 33.00 ATOM 224 N ARG n 30 171.445 209.955 191.915 1.00 38.00 ATOM 225 CA ARG n 30 172.441 211.017 191.832 1.00 34.99 ATOM 226 C ARG n 30 173.822 210.502 192.215 1.00 38.79 ATOM 227 O ARG n 30 174.823 210.875 191.594 1.00 36.37 ATOM 228 CB ARG n 30 172.037 212.196 192.719 1.00 33.43 ATOM 229 N GLN n 31 173.892 209.640 193.235 1.00 47.50 ATOM 230 CA GLN n 31 175.173 209.075 193.646 1.00 43.83 ATOM 231 C GLN n 31 175.795 208.240 192.535 1.00 40.75 ATOM 232 O GLN n 31 177.002 208.324 192.287 1.00 41.03 ATOM 233 CB GLN n 31 174.983 208.235 194.909 1.00 42.21 ATOM 234 CG GLN n 31 176.253 207.633 195.477 1.00 43.84 ATOM 235 CD GLN n 31 177.412 208.602 195.479 1.00 49.69 ATOM 236 OE1 GLN n 31 178.392 208.415 194.757 1.00 47.82 ATOM 237 NE2 GLN n 31 177.315 209.640 196.302 1.00 47.52 ATOM 238 N ARG n 32 174.985 207.429 191.852 1.00 42.75 ATOM 239 CA ARG n 32 175.503 206.646 190.733 1.00 42.05 ATOM 240 C ARG n 32 176.030 207.546 189.628 1.00 37.80 ATOM 241 O ARG n 32 177.103 207.293 189.069 1.00 36.99 ATOM 242 CB ARG n 32 174.422 205.717 190.181 1.00 40.82 ATOM 243 CG ARG n 32 174.840 204.978 188.923 1.00 37.69 ATOM 244 CD ARG n 32 173.650 204.323 188.237 1.00 43.10 ATOM 245 NE ARG n 32 173.631 202.880 188.434 1.00 42.44 ATOM 246 CZ ARG n 32 174.073 201.994 187.553 1.00 42.43 ATOM 247 NH1 ARG n 32 174.574 202.366 186.387 1.00 39.71 ATOM 248 NH2 ARG n 32 174.007 200.699 187.849 1.00 45.36 ATOM 249 N SER n 33 175.290 208.602 189.290 1.00 47.82 ATOM 250 CA SER n 33 175.766 209.488 188.232 1.00 46.25 ATOM 251 C SER n 33 177.048 210.219 188.609 1.00 47.07 ATOM 252 O SER n 33 177.937 210.369 187.766 1.00 42.51 ATOM 253 CB SER n 33 174.707 210.515 187.863 1.00 43.06 ATOM 254 OG SER n 33 175.321 211.602 187.200 1.00 45.14 ATOM 255 N LYS n 34 177.155 210.705 189.841 1.00 47.35 ATOM 256 CA LYS n 34 178.342 211.442 190.256 1.00 42.64 ATOM 257 C LYS n 34 179.496 210.488 190.536 1.00 47.83 ATOM 258 O LYS n 34 180.103 209.950 189.613 1.00 52.49 ATOM 259 CB LYS n 34 178.048 212.290 191.493 1.00 43.70 TER