HEADER TRANSLATION 31-DEC-69 8AGX TITLE Yeast RQC complex in state with the RING domain of Ltn1 in the IN TITLE 2 position COMPND MOL_ID: 29; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: d; EXPDTA ELECTRON MICROSCOPY DBREF 8AGX d 4 28 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 d 22 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 d 22 LYS ARG LYS ARG ARG LYS VAL ARG ALA ATOM 1 N MET d 4 228.151 245.269 317.207 1.00 79.88 ATOM 2 CA MET d 4 227.994 244.979 318.617 1.00 79.88 ATOM 3 C MET d 4 229.155 245.604 319.397 1.00 79.88 ATOM 4 O MET d 4 230.095 246.137 318.813 1.00 79.88 ATOM 5 CB MET d 4 227.910 243.464 318.850 1.00 79.88 ATOM 6 CG MET d 4 227.024 243.036 320.020 1.00 79.88 ATOM 7 SD MET d 4 226.614 241.291 320.082 1.00 79.88 ATOM 8 CE MET d 4 225.169 241.264 319.060 1.00 79.88 ATOM 9 N ARG d 5 229.004 245.543 320.724 1.00 92.66 ATOM 10 CA ARG d 5 229.648 246.237 321.844 1.00 92.66 ATOM 11 C ARG d 5 229.189 247.692 321.917 1.00 92.66 ATOM 12 O ARG d 5 228.915 248.171 323.016 1.00 92.66 ATOM 13 CB ARG d 5 231.185 246.224 321.775 1.00 92.66 ATOM 14 CG ARG d 5 231.911 244.884 321.861 1.00 92.66 ATOM 15 CD ARG d 5 231.790 244.132 323.171 1.00 92.66 ATOM 16 NE ARG d 5 230.602 243.291 323.233 1.00 92.66 ATOM 17 CZ ARG d 5 230.146 242.732 324.343 1.00 92.66 ATOM 18 NH1 ARG d 5 230.746 242.920 325.505 1.00 92.66 ATOM 19 NH2 ARG d 5 229.069 241.955 324.285 1.00 92.66 ATOM 20 N ALA d 6 228.797 248.283 320.791 1.00101.19 ATOM 21 CA ALA d 6 228.355 249.670 320.755 1.00101.19 ATOM 22 C ALA d 6 226.844 249.755 320.894 1.00101.19 ATOM 23 O ALA d 6 226.337 250.376 321.833 1.00101.19 ATOM 24 CB ALA d 6 228.808 250.342 319.457 1.00101.19 ATOM 25 N LYS d 7 226.117 249.091 319.989 1.00105.96 ATOM 26 CA LYS d 7 224.685 248.911 320.182 1.00105.96 ATOM 27 C LYS d 7 224.399 248.044 321.400 1.00105.96 ATOM 28 O LYS d 7 223.357 248.204 322.041 1.00105.96 ATOM 29 CB LYS d 7 224.054 248.294 318.933 1.00105.96 ATOM 30 CG LYS d 7 223.836 249.282 317.802 1.00105.96 ATOM 31 CD LYS d 7 223.412 248.583 316.522 1.00105.96 ATOM 32 CE LYS d 7 222.045 247.938 316.681 1.00105.96 ATOM 33 NZ LYS d 7 221.371 247.743 315.368 1.00105.96 ATOM 34 N TRP d 8 225.329 247.157 321.758 1.00104.47 ATOM 35 CA TRP d 8 225.167 246.337 322.953 1.00104.47 ATOM 36 C TRP d 8 225.305 247.174 324.225 1.00104.47 ATOM 37 O TRP d 8 224.512 247.021 325.162 1.00104.47 ATOM 38 CB TRP d 8 226.182 245.198 322.927 1.00104.47 ATOM 39 CG TRP d 8 226.030 244.195 324.017 1.00104.47 ATOM 40 CD1 TRP d 8 225.172 243.137 324.036 1.00104.47 ATOM 41 CD2 TRP d 8 226.781 244.127 325.232 1.00104.47 ATOM 42 NE1 TRP d 8 225.329 242.420 325.196 1.00104.47 ATOM 43 CE2 TRP d 8 226.312 243.008 325.948 1.00104.47 ATOM 44 CE3 TRP d 8 227.795 244.907 325.790 1.00104.47 ATOM 45 CZ2 TRP d 8 226.824 242.653 327.191 1.00104.47 ATOM 46 CZ3 TRP d 8 228.301 244.552 327.023 1.00104.47 ATOM 47 CH2 TRP d 8 227.815 243.434 327.711 1.00104.47 ATOM 48 N ARG d 9 226.288 248.084 324.273 1.00109.80 ATOM 49 CA ARG d 9 226.409 248.975 325.419 1.00109.80 ATOM 50 C ARG d 9 225.260 249.975 325.465 1.00109.80 ATOM 51 O ARG d 9 224.803 250.350 326.550 1.00109.80 ATOM 52 CB ARG d 9 227.757 249.693 325.377 1.00109.80 ATOM 53 CG ARG d 9 228.832 249.009 326.199 1.00109.80 ATOM 54 CD ARG d 9 230.181 249.676 326.026 1.00109.80 ATOM 55 NE ARG d 9 230.811 249.326 324.760 1.00109.80 ATOM 56 CZ ARG d 9 231.268 250.207 323.882 1.00109.80 ATOM 57 NH1 ARG d 9 231.175 251.510 324.098 1.00109.80 ATOM 58 NH2 ARG d 9 231.836 249.773 322.762 1.00109.80 ATOM 59 N LYS d 10 224.774 250.402 324.295 1.00129.25 ATOM 60 CA LYS d 10 223.601 251.269 324.244 1.00129.25 ATOM 61 C LYS d 10 222.356 250.557 324.766 1.00129.25 ATOM 62 O LYS d 10 221.559 251.156 325.492 1.00129.25 ATOM 63 CB LYS d 10 223.384 251.766 322.815 1.00129.25 ATOM 64 CG LYS d 10 222.644 253.089 322.714 1.00129.25 ATOM 65 CD LYS d 10 222.874 253.745 321.363 1.00129.25 ATOM 66 CE LYS d 10 222.141 255.071 321.258 1.00129.25 ATOM 67 NZ LYS d 10 222.457 255.973 322.400 1.00129.25 ATOM 68 N LYS d 11 222.189 249.275 324.426 1.00114.77 ATOM 69 CA LYS d 11 221.069 248.490 324.944 1.00114.77 ATOM 70 C LYS d 11 221.195 248.266 326.446 1.00114.77 ATOM 71 O LYS d 11 220.195 248.294 327.172 1.00114.77 ATOM 72 CB LYS d 11 220.993 247.153 324.204 1.00114.77 ATOM 73 CG LYS d 11 219.894 246.220 324.682 1.00114.77 ATOM 74 CD LYS d 11 220.019 244.849 324.053 1.00114.77 ATOM 75 CE LYS d 11 218.894 243.941 324.507 1.00114.77 ATOM 76 NZ LYS d 11 217.572 244.605 324.361 1.00114.77 ATOM 77 N ARG d 12 222.425 248.055 326.923 1.00118.45 ATOM 78 CA ARG d 12 222.681 247.877 328.351 1.00118.45 ATOM 79 C ARG d 12 222.333 249.134 329.143 1.00118.45 ATOM 80 O ARG d 12 221.633 249.067 330.164 1.00118.45 ATOM 81 CB ARG d 12 224.148 247.498 328.541 1.00118.45 ATOM 82 CG ARG d 12 224.622 247.321 329.962 1.00118.45 ATOM 83 CD ARG d 12 226.057 246.827 329.935 1.00118.45 ATOM 84 NE ARG d 12 226.682 246.811 331.249 1.00118.45 ATOM 85 CZ ARG d 12 227.937 246.446 331.471 1.00118.45 ATOM 86 NH1 ARG d 12 228.722 246.047 330.486 1.00118.45 ATOM 87 NH2 ARG d 12 228.414 246.482 332.711 1.00118.45 ATOM 88 N THR d 13 222.791 250.297 328.667 1.00128.80 ATOM 89 CA THR d 13 222.452 251.548 329.335 1.00128.80 ATOM 90 C THR d 13 220.976 251.892 329.184 1.00128.80 ATOM 91 O THR d 13 220.404 252.507 330.087 1.00128.80 ATOM 92 CB THR d 13 223.315 252.698 328.815 1.00128.80 ATOM 93 OG1 THR d 13 223.095 252.878 327.411 1.00128.80 ATOM 94 CG2 THR d 13 224.788 252.435 329.089 1.00128.80 ATOM 95 N ARG d 14 220.342 251.498 328.071 1.00121.81 ATOM 96 CA ARG d 14 218.903 251.699 327.926 1.00121.81 ATOM 97 C ARG d 14 218.121 250.864 328.931 1.00121.81 ATOM 98 O ARG d 14 217.147 251.350 329.520 1.00121.81 ATOM 99 CB ARG d 14 218.458 251.358 326.504 1.00121.81 ATOM 100 CG ARG d 14 218.449 252.534 325.545 1.00121.81 ATOM 101 CD ARG d 14 217.748 252.171 324.246 1.00121.81 ATOM 102 NE ARG d 14 218.611 251.436 323.330 1.00121.81 ATOM 103 CZ ARG d 14 218.480 250.148 323.053 1.00121.81 ATOM 104 NH1 ARG d 14 217.536 249.412 323.614 1.00121.81 ATOM 105 NH2 ARG d 14 219.319 249.581 322.191 1.00121.81 ATOM 106 N ARG d 15 218.535 249.611 329.142 1.00129.75 ATOM 107 CA ARG d 15 217.882 248.755 330.129 1.00129.75 ATOM 108 C ARG d 15 218.071 249.288 331.544 1.00129.75 ATOM 109 O ARG d 15 217.114 249.324 332.329 1.00129.75 ATOM 110 CB ARG d 15 218.409 247.323 330.013 1.00129.75 ATOM 111 CG ARG d 15 217.941 246.393 331.121 1.00129.75 ATOM 112 CD ARG d 15 218.515 244.989 330.978 1.00129.75 ATOM 113 NE ARG d 15 219.806 244.956 330.301 1.00129.75 ATOM 114 CZ ARG d 15 220.978 245.051 330.912 1.00129.75 ATOM 115 NH1 ARG d 15 221.063 245.196 332.225 1.00129.75 ATOM 116 NH2 ARG d 15 222.092 244.992 330.190 1.00129.75 ATOM 117 N LEU d 16 219.287 249.739 331.874 1.00141.50 ATOM 118 CA LEU d 16 219.532 250.294 333.203 1.00141.50 ATOM 119 C LEU d 16 218.787 251.611 333.412 1.00141.50 ATOM 120 O LEU d 16 218.264 251.864 334.504 1.00141.50 ATOM 121 CB LEU d 16 221.032 250.487 333.429 1.00141.50 ATOM 122 CG LEU d 16 221.865 249.207 333.521 1.00141.50 ATOM 123 CD1 LEU d 16 223.339 249.534 333.695 1.00141.50 ATOM 124 CD2 LEU d 16 221.371 248.314 334.645 1.00141.50 ATOM 125 N LYS d 17 218.709 252.447 332.372 1.00151.78 ATOM 126 CA LYS d 17 217.985 253.710 332.456 1.00151.78 ATOM 127 C LYS d 17 216.488 253.480 332.621 1.00151.78 ATOM 128 O LYS d 17 215.843 254.150 333.435 1.00151.78 ATOM 129 CB LYS d 17 218.274 254.551 331.210 1.00151.78 ATOM 130 CG LYS d 17 217.269 255.655 330.924 1.00151.78 ATOM 131 CD LYS d 17 217.549 256.318 329.587 1.00151.78 ATOM 132 CE LYS d 17 218.686 257.319 329.689 1.00151.78 ATOM 133 NZ LYS d 17 218.284 258.547 330.425 1.00151.78 ATOM 134 N ARG d 18 215.924 252.521 331.877 1.00144.01 ATOM 135 CA ARG d 18 214.514 252.181 332.038 1.00144.01 ATOM 136 C ARG d 18 214.231 251.618 333.424 1.00144.01 ATOM 137 O ARG d 18 213.235 251.998 334.055 1.00144.01 ATOM 138 CB ARG d 18 214.088 251.181 330.964 1.00144.01 ATOM 139 CG ARG d 18 213.800 251.792 329.604 1.00144.01 ATOM 140 CD ARG d 18 213.326 250.727 328.631 1.00144.01 ATOM 141 NE ARG d 18 213.506 251.125 327.240 1.00144.01 ATOM 142 CZ ARG d 18 212.614 251.815 326.543 1.00144.01 ATOM 143 NH1 ARG d 18 211.468 252.201 327.076 1.00144.01 ATOM 144 NH2 ARG d 18 212.880 252.121 325.276 1.00144.01 ATOM 145 N LYS d 19 215.109 250.739 333.922 1.00160.32 ATOM 146 CA LYS d 19 214.930 250.149 335.246 1.00160.32 ATOM 147 C LYS d 19 214.999 251.204 336.345 1.00160.32 ATOM 148 O LYS d 19 214.175 251.192 337.272 1.00160.32 ATOM 149 CB LYS d 19 215.982 249.061 335.463 1.00160.32 ATOM 150 CG LYS d 19 215.842 248.278 336.754 1.00160.32 ATOM 151 CD LYS d 19 216.950 248.632 337.731 1.00160.32 ATOM 152 CE LYS d 19 218.284 248.065 337.274 1.00160.32 ATOM 153 NZ LYS d 19 219.363 248.309 338.271 1.00160.32 ATOM 154 N ARG d 20 215.941 252.146 336.238 1.00177.83 ATOM 155 CA ARG d 20 216.027 253.191 337.253 1.00177.83 ATOM 156 C ARG d 20 214.878 254.187 337.132 1.00177.83 ATOM 157 O ARG d 20 214.409 254.700 338.154 1.00177.83 ATOM 158 CB ARG d 20 217.396 253.884 337.208 1.00177.83 ATOM 159 CG ARG d 20 217.658 254.821 336.048 1.00177.83 ATOM 160 CD ARG d 20 219.005 255.505 336.205 1.00177.83 ATOM 161 NE ARG d 20 219.417 256.205 334.994 1.00177.83 ATOM 162 CZ ARG d 20 219.078 257.453 334.700 1.00177.83 ATOM 163 NH1 ARG d 20 218.312 258.168 335.506 1.00177.83 ATOM 164 NH2 ARG d 20 219.520 257.996 333.570 1.00177.83 ATOM 165 N ARG d 21 214.355 254.408 335.918 1.00188.61 ATOM 166 CA ARG d 21 213.189 255.275 335.756 1.00188.61 ATOM 167 C ARG d 21 211.935 254.662 336.366 1.00188.61 ATOM 168 O ARG d 21 211.115 255.387 336.940 1.00188.61 ATOM 169 CB ARG d 21 212.956 255.579 334.275 1.00188.61 ATOM 170 CG ARG d 21 213.824 256.697 333.713 1.00188.61 ATOM 171 CD ARG d 21 213.814 257.940 334.585 1.00188.61 ATOM 172 NE ARG d 21 212.626 258.752 334.359 1.00188.61 ATOM 173 CZ ARG d 21 212.642 259.957 333.805 1.00188.61 ATOM 174 NH1 ARG d 21 213.774 260.521 333.413 1.00188.61 ATOM 175 NH2 ARG d 21 211.497 260.610 333.635 1.00188.61 ATOM 176 N LYS d 22 211.755 253.342 336.253 1.00178.75 ATOM 177 CA LYS d 22 210.592 252.733 336.899 1.00178.75 ATOM 178 C LYS d 22 210.769 252.548 338.404 1.00178.75 ATOM 179 O LYS d 22 209.768 252.565 339.129 1.00178.75 ATOM 180 CB LYS d 22 210.227 251.395 336.255 1.00178.75 ATOM 181 CG LYS d 22 210.188 251.417 334.750 1.00178.75 ATOM 182 CD LYS d 22 210.557 250.066 334.186 1.00178.75 ATOM 183 CE LYS d 22 210.304 250.008 332.702 1.00178.75 ATOM 184 NZ LYS d 22 211.375 249.204 332.076 1.00178.75 ATOM 185 N VAL d 23 211.995 252.372 338.912 1.00193.38 ATOM 186 CA VAL d 23 212.112 252.262 340.370 1.00193.38 ATOM 187 C VAL d 23 212.150 253.652 340.998 1.00193.38 ATOM 188 O VAL d 23 212.002 253.782 342.222 1.00193.38 ATOM 189 CB VAL d 23 213.336 251.407 340.777 1.00193.38 ATOM 190 CG1 VAL d 23 214.642 252.065 340.409 1.00193.38 ATOM 191 CG2 VAL d 23 213.288 250.891 342.237 1.00193.38 ATOM 192 N ARG d 24 212.317 254.701 340.182 1.00198.67 ATOM 193 CA ARG d 24 212.095 256.072 340.638 1.00198.67 ATOM 194 C ARG d 24 210.670 256.261 341.148 1.00198.67 ATOM 195 O ARG d 24 210.459 256.604 342.319 1.00198.67 ATOM 196 CB ARG d 24 212.374 257.052 339.495 1.00198.67 ATOM 197 CG ARG d 24 213.768 257.648 339.458 1.00198.67 ATOM 198 CD ARG d 24 213.808 258.802 338.468 1.00198.67 ATOM 199 NE ARG d 24 215.164 259.156 338.065 1.00198.67 ATOM 200 CZ ARG d 24 215.461 260.149 337.239 1.00198.67 ATOM 201 NH1 ARG d 24 214.518 260.900 336.693 1.00198.67 ATOM 202 NH2 ARG d 24 216.736 260.393 336.948 1.00198.67 ATOM 203 N ALA d 25 209.688 256.027 340.273 1.00211.45 ATOM 204 CA ALA d 25 208.243 256.117 340.546 1.00211.45 ATOM 205 C ALA d 25 207.811 257.464 341.128 1.00211.45 ATOM 206 O ALA d 25 208.439 258.492 340.875 1.00211.45 ATOM 207 CB ALA d 25 207.799 254.974 341.467 1.00211.45 TER