HEADER TRANSLATION 31-DEC-69 8AGZ TITLE Yeast RQC complex in state with the RING domain of Ltn1 in the OUT TITLE 2 position COMPND MOL_ID: 29; COMPND 2 MOLECULE: 60S ribosomal protein L41-A; COMPND 3 CHAIN: d; EXPDTA ELECTRON MICROSCOPY DBREF 8AGZ d 4 28 UNP P0CX86 RL41A_YEAST 1 25 SEQRES 1 d 22 MET ARG ALA LYS TRP ARG LYS LYS ARG THR ARG ARG LEU SEQRES 2 d 22 LYS ARG LYS ARG ARG LYS VAL ARG ALA ATOM 1 N MET d 4 227.694 245.704 317.186 1.00 79.88 ATOM 2 CA MET d 4 227.530 245.417 318.596 1.00 79.88 ATOM 3 C MET d 4 228.693 246.035 319.379 1.00 79.88 ATOM 4 O MET d 4 229.639 246.559 318.798 1.00 79.88 ATOM 5 CB MET d 4 227.434 243.903 318.832 1.00 79.88 ATOM 6 CG MET d 4 226.541 243.485 319.999 1.00 79.88 ATOM 7 SD MET d 4 226.117 241.743 320.064 1.00 79.88 ATOM 8 CE MET d 4 224.676 241.724 319.036 1.00 79.88 ATOM 9 N ARG d 5 228.537 245.978 320.706 1.00 92.66 ATOM 10 CA ARG d 5 229.182 246.669 321.826 1.00 92.66 ATOM 11 C ARG d 5 228.734 248.127 321.895 1.00 92.66 ATOM 12 O ARG d 5 228.460 248.611 322.991 1.00 92.66 ATOM 13 CB ARG d 5 230.720 246.645 321.763 1.00 92.66 ATOM 14 CG ARG d 5 231.434 245.299 321.854 1.00 92.66 ATOM 15 CD ARG d 5 231.303 244.551 323.166 1.00 92.66 ATOM 16 NE ARG d 5 230.109 243.719 323.224 1.00 92.66 ATOM 17 CZ ARG d 5 229.645 243.165 324.334 1.00 92.66 ATOM 18 NH1 ARG d 5 230.242 243.352 325.498 1.00 92.66 ATOM 19 NH2 ARG d 5 228.562 242.397 324.274 1.00 92.66 ATOM 20 N ALA d 6 228.350 248.720 320.767 1.00101.19 ATOM 21 CA ALA d 6 227.919 250.110 320.727 1.00101.19 ATOM 22 C ALA d 6 226.408 250.206 320.861 1.00101.19 ATOM 23 O ALA d 6 225.903 250.833 321.796 1.00101.19 ATOM 24 CB ALA d 6 228.382 250.776 319.429 1.00101.19 ATOM 25 N LYS d 7 225.680 249.546 319.954 1.00105.96 ATOM 26 CA LYS d 7 224.245 249.377 320.141 1.00105.96 ATOM 27 C LYS d 7 223.948 248.515 321.361 1.00105.96 ATOM 28 O LYS d 7 222.905 248.683 321.997 1.00105.96 ATOM 29 CB LYS d 7 223.615 248.763 318.892 1.00105.96 ATOM 30 CG LYS d 7 223.408 249.750 317.757 1.00105.96 ATOM 31 CD LYS d 7 222.984 249.051 316.477 1.00105.96 ATOM 32 CE LYS d 7 221.610 248.417 316.633 1.00105.96 ATOM 33 NZ LYS d 7 220.939 248.225 315.317 1.00105.96 ATOM 34 N TRP d 8 224.871 247.622 321.723 1.00104.47 ATOM 35 CA TRP d 8 224.699 246.805 322.919 1.00104.47 ATOM 36 C TRP d 8 224.838 247.643 324.190 1.00104.47 ATOM 37 O TRP d 8 224.040 247.498 325.124 1.00104.47 ATOM 38 CB TRP d 8 225.705 245.658 322.899 1.00104.47 ATOM 39 CG TRP d 8 225.541 244.660 323.990 1.00104.47 ATOM 40 CD1 TRP d 8 224.675 243.607 324.009 1.00104.47 ATOM 41 CD2 TRP d 8 226.287 244.588 325.209 1.00104.47 ATOM 42 NE1 TRP d 8 224.823 242.892 325.171 1.00104.47 ATOM 43 CE2 TRP d 8 225.807 243.474 325.925 1.00104.47 ATOM 44 CE3 TRP d 8 227.305 245.362 325.769 1.00104.47 ATOM 45 CZ2 TRP d 8 226.312 243.116 327.170 1.00104.47 ATOM 46 CZ3 TRP d 8 227.804 245.005 327.005 1.00104.47 ATOM 47 CH2 TRP d 8 227.308 243.892 327.692 1.00104.47 ATOM 48 N ARG d 9 225.828 248.546 324.240 1.00109.80 ATOM 49 CA ARG d 9 225.952 249.439 325.385 1.00109.80 ATOM 50 C ARG d 9 224.810 250.447 325.425 1.00109.80 ATOM 51 O ARG d 9 224.351 250.828 326.507 1.00109.80 ATOM 52 CB ARG d 9 227.305 250.147 325.346 1.00109.80 ATOM 53 CG ARG d 9 228.372 249.455 326.174 1.00109.80 ATOM 54 CD ARG d 9 229.727 250.113 326.005 1.00109.80 ATOM 55 NE ARG d 9 230.358 249.755 324.741 1.00109.80 ATOM 56 CZ ARG d 9 230.825 250.632 323.863 1.00109.80 ATOM 57 NH1 ARG d 9 230.741 251.935 324.075 1.00109.80 ATOM 58 NH2 ARG d 9 231.394 250.190 322.746 1.00109.80 ATOM 59 N LYS d 10 224.331 250.876 324.252 1.00129.25 ATOM 60 CA LYS d 10 223.165 251.752 324.195 1.00129.25 ATOM 61 C LYS d 10 221.913 251.050 324.714 1.00129.25 ATOM 62 O LYS d 10 221.117 251.657 325.437 1.00129.25 ATOM 63 CB LYS d 10 222.957 252.247 322.764 1.00129.25 ATOM 64 CG LYS d 10 222.227 253.575 322.658 1.00129.25 ATOM 65 CD LYS d 10 222.467 254.226 321.306 1.00129.25 ATOM 66 CE LYS d 10 221.745 255.558 321.196 1.00129.25 ATOM 67 NZ LYS d 10 222.063 256.460 322.338 1.00129.25 ATOM 68 N LYS d 11 221.737 249.768 324.376 1.00114.77 ATOM 69 CA LYS d 11 220.610 248.993 324.891 1.00114.77 ATOM 70 C LYS d 11 220.728 248.772 326.394 1.00114.77 ATOM 71 O LYS d 11 219.725 248.808 327.117 1.00114.77 ATOM 72 CB LYS d 11 220.526 247.655 324.153 1.00114.77 ATOM 73 CG LYS d 11 219.418 246.731 324.629 1.00114.77 ATOM 74 CD LYS d 11 219.535 245.358 324.003 1.00114.77 ATOM 75 CE LYS d 11 218.402 244.459 324.455 1.00114.77 ATOM 76 NZ LYS d 11 217.085 245.134 324.303 1.00114.77 ATOM 77 N ARG d 12 221.955 248.552 326.876 1.00118.45 ATOM 78 CA ARG d 12 222.204 248.375 328.305 1.00118.45 ATOM 79 C ARG d 12 221.863 249.636 329.094 1.00118.45 ATOM 80 O ARG d 12 221.159 249.577 330.113 1.00118.45 ATOM 81 CB ARG d 12 223.668 247.984 328.501 1.00118.45 ATOM 82 CG ARG d 12 224.135 247.807 329.924 1.00118.45 ATOM 83 CD ARG d 12 225.566 247.302 329.903 1.00118.45 ATOM 84 NE ARG d 12 226.186 247.284 331.220 1.00118.45 ATOM 85 CZ ARG d 12 227.438 246.911 331.447 1.00118.45 ATOM 86 NH1 ARG d 12 228.224 246.503 330.465 1.00118.45 ATOM 87 NH2 ARG d 12 227.911 246.945 332.689 1.00118.45 ATOM 88 N THR d 13 222.331 250.794 328.617 1.00128.80 ATOM 89 CA THR d 13 221.999 252.050 329.281 1.00128.80 ATOM 90 C THR d 13 220.527 252.405 329.124 1.00128.80 ATOM 91 O THR d 13 219.957 253.025 330.023 1.00128.80 ATOM 92 CB THR d 13 222.873 253.192 328.762 1.00128.80 ATOM 93 OG1 THR d 13 222.659 253.370 327.357 1.00128.80 ATOM 94 CG2 THR d 13 224.343 252.918 329.042 1.00128.80 ATOM 95 N ARG d 14 219.894 252.013 328.010 1.00121.81 ATOM 96 CA ARG d 14 218.457 252.224 327.860 1.00121.81 ATOM 97 C ARG d 14 217.664 251.398 328.863 1.00121.81 ATOM 98 O ARG d 14 216.693 251.892 329.447 1.00121.81 ATOM 99 CB ARG d 14 218.015 251.884 326.436 1.00121.81 ATOM 100 CG ARG d 14 218.017 253.057 325.475 1.00121.81 ATOM 101 CD ARG d 14 217.318 252.698 324.174 1.00121.81 ATOM 102 NE ARG d 14 218.179 251.955 323.263 1.00121.81 ATOM 103 CZ ARG d 14 218.040 250.666 322.988 1.00121.81 ATOM 104 NH1 ARG d 14 217.088 249.939 323.547 1.00121.81 ATOM 105 NH2 ARG d 14 218.877 250.092 322.130 1.00121.81 ATOM 106 N ARG d 15 218.069 250.142 329.078 1.00129.75 ATOM 107 CA ARG d 15 217.405 249.293 330.064 1.00129.75 ATOM 108 C ARG d 15 217.594 249.828 331.478 1.00129.75 ATOM 109 O ARG d 15 216.634 249.872 332.260 1.00129.75 ATOM 110 CB ARG d 15 217.923 247.857 329.953 1.00129.75 ATOM 111 CG ARG d 15 217.443 246.932 331.060 1.00129.75 ATOM 112 CD ARG d 15 218.007 245.524 330.923 1.00129.75 ATOM 113 NE ARG d 15 219.300 245.479 330.250 1.00129.75 ATOM 114 CZ ARG d 15 220.471 245.567 330.866 1.00129.75 ATOM 115 NH1 ARG d 15 220.552 245.714 332.178 1.00129.75 ATOM 116 NH2 ARG d 15 221.587 245.498 330.147 1.00129.75 ATOM 117 N LEU d 16 218.812 250.269 331.812 1.00141.50 ATOM 118 CA LEU d 16 219.057 250.826 333.142 1.00141.50 ATOM 119 C LEU d 16 218.320 252.147 333.344 1.00141.50 ATOM 120 O LEU d 16 217.795 252.407 334.434 1.00141.50 ATOM 121 CB LEU d 16 220.557 251.007 333.372 1.00141.50 ATOM 122 CG LEU d 16 221.380 249.720 333.469 1.00141.50 ATOM 123 CD1 LEU d 16 222.856 250.038 333.648 1.00141.50 ATOM 124 CD2 LEU d 16 220.875 248.834 334.594 1.00141.50 ATOM 125 N LYS d 17 218.253 252.982 332.302 1.00151.78 ATOM 126 CA LYS d 17 217.538 254.251 332.382 1.00151.78 ATOM 127 C LYS d 17 216.038 254.033 332.542 1.00151.78 ATOM 128 O LYS d 17 215.396 254.709 333.352 1.00151.78 ATOM 129 CB LYS d 17 217.837 255.087 331.135 1.00151.78 ATOM 130 CG LYS d 17 216.842 256.199 330.844 1.00151.78 ATOM 131 CD LYS d 17 217.133 256.857 329.506 1.00151.78 ATOM 132 CE LYS d 17 218.276 257.849 329.611 1.00151.78 ATOM 133 NZ LYS d 17 217.880 259.081 330.342 1.00151.78 ATOM 134 N ARG d 18 215.470 253.077 331.799 1.00144.01 ATOM 135 CA ARG d 18 214.057 252.747 331.954 1.00144.01 ATOM 136 C ARG d 18 213.764 252.190 333.341 1.00144.01 ATOM 137 O ARG d 18 212.770 252.579 333.967 1.00144.01 ATOM 138 CB ARG d 18 213.627 251.749 330.881 1.00144.01 ATOM 139 CG ARG d 18 213.349 252.359 329.518 1.00144.01 ATOM 140 CD ARG d 18 212.871 251.296 328.546 1.00144.01 ATOM 141 NE ARG d 18 213.058 251.690 327.155 1.00144.01 ATOM 142 CZ ARG d 18 212.175 252.385 326.453 1.00144.01 ATOM 143 NH1 ARG d 18 211.029 252.781 326.981 1.00144.01 ATOM 144 NH2 ARG d 18 212.447 252.687 325.186 1.00144.01 ATOM 145 N LYS d 19 214.634 251.305 333.843 1.00160.32 ATOM 146 CA LYS d 19 214.447 250.719 335.167 1.00160.32 ATOM 147 C LYS d 19 214.518 251.775 336.265 1.00160.32 ATOM 148 O LYS d 19 213.691 251.771 337.188 1.00160.32 ATOM 149 CB LYS d 19 215.489 249.623 335.391 1.00160.32 ATOM 150 CG LYS d 19 215.339 248.843 336.682 1.00160.32 ATOM 151 CD LYS d 19 216.446 249.192 337.663 1.00160.32 ATOM 152 CE LYS d 19 217.777 248.613 337.212 1.00160.32 ATOM 153 NZ LYS d 19 218.854 248.852 338.213 1.00160.32 ATOM 154 N ARG d 20 215.468 252.711 336.160 1.00177.83 ATOM 155 CA ARG d 20 215.559 253.757 337.172 1.00177.83 ATOM 156 C ARG d 20 214.417 254.761 337.046 1.00177.83 ATOM 157 O ARG d 20 213.949 255.280 338.065 1.00177.83 ATOM 158 CB ARG d 20 216.933 254.439 337.132 1.00177.83 ATOM 159 CG ARG d 20 217.206 255.372 335.971 1.00177.83 ATOM 160 CD ARG d 20 218.557 256.046 336.131 1.00177.83 ATOM 161 NE ARG d 20 218.979 256.740 334.920 1.00177.83 ATOM 162 CZ ARG d 20 218.652 257.989 334.622 1.00177.83 ATOM 163 NH1 ARG d 20 217.888 258.713 335.424 1.00177.83 ATOM 164 NH2 ARG d 20 219.102 258.528 333.492 1.00177.83 ATOM 165 N ARG d 21 213.900 254.983 335.829 1.00188.61 ATOM 166 CA ARG d 21 212.743 255.858 335.661 1.00188.61 ATOM 167 C ARG d 21 211.481 255.256 336.268 1.00188.61 ATOM 168 O ARG d 21 210.664 255.989 336.837 1.00188.61 ATOM 169 CB ARG d 21 212.517 256.162 334.179 1.00188.61 ATOM 170 CG ARG d 21 213.396 257.272 333.618 1.00188.61 ATOM 171 CD ARG d 21 213.392 258.517 334.487 1.00188.61 ATOM 172 NE ARG d 21 212.210 259.337 334.256 1.00188.61 ATOM 173 CZ ARG d 21 212.238 260.541 333.699 1.00188.61 ATOM 174 NH1 ARG d 21 213.375 261.096 333.310 1.00188.61 ATOM 175 NH2 ARG d 21 211.098 261.202 333.524 1.00188.61 ATOM 176 N LYS d 22 211.292 253.938 336.157 1.00178.75 ATOM 177 CA LYS d 22 210.122 253.339 336.800 1.00178.75 ATOM 178 C LYS d 22 210.291 253.156 338.306 1.00178.75 ATOM 179 O LYS d 22 209.288 253.181 339.027 1.00178.75 ATOM 180 CB LYS d 22 209.749 252.003 336.157 1.00178.75 ATOM 181 CG LYS d 22 209.716 252.022 334.652 1.00178.75 ATOM 182 CD LYS d 22 210.076 250.666 334.093 1.00178.75 ATOM 183 CE LYS d 22 209.828 250.608 332.607 1.00178.75 ATOM 184 NZ LYS d 22 210.895 249.795 331.986 1.00178.75 ATOM 185 N VAL d 23 211.515 252.971 338.819 1.00193.38 ATOM 186 CA VAL d 23 211.626 252.864 340.277 1.00193.38 ATOM 187 C VAL d 23 211.672 254.255 340.903 1.00193.38 ATOM 188 O VAL d 23 211.520 254.388 342.126 1.00193.38 ATOM 189 CB VAL d 23 212.841 252.001 340.691 1.00193.38 ATOM 190 CG1 VAL d 23 214.154 252.647 340.326 1.00193.38 ATOM 191 CG2 VAL d 23 212.784 251.487 342.151 1.00193.38 ATOM 192 N ARG d 24 211.850 255.301 340.085 1.00198.67 ATOM 193 CA ARG d 24 211.636 256.675 340.539 1.00198.67 ATOM 194 C ARG d 24 210.212 256.874 341.043 1.00198.67 ATOM 195 O ARG d 24 209.999 257.221 342.212 1.00198.67 ATOM 196 CB ARG d 24 211.927 257.649 339.394 1.00198.67 ATOM 197 CG ARG d 24 213.326 258.235 339.361 1.00198.67 ATOM 198 CD ARG d 24 213.378 259.387 338.369 1.00198.67 ATOM 199 NE ARG d 24 214.738 259.729 337.971 1.00198.67 ATOM 200 CZ ARG d 24 215.046 260.718 337.143 1.00198.67 ATOM 201 NH1 ARG d 24 214.110 261.475 336.592 1.00198.67 ATOM 202 NH2 ARG d 24 216.323 260.953 336.857 1.00198.67 ATOM 203 N ALA d 25 209.230 256.646 340.165 1.00211.45 ATOM 204 CA ALA d 25 207.786 256.748 340.431 1.00211.45 ATOM 205 C ALA d 25 207.361 258.099 341.010 1.00211.45 ATOM 206 O ALA d 25 207.998 259.121 340.757 1.00211.45 ATOM 207 CB ALA d 25 207.330 255.610 341.354 1.00211.45 TER