HEADER MEMBRANE PROTEIN 31-DEC-69 8B5L TITLE Cryo-EM structure of ribosome-Sec61-TRAP (TRanslocon Associated TITLE 2 Protein) translocon complex COMPND MOL_ID: 22; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: n; EXPDTA ELECTRON MICROSCOPY DBREF 8B5L n 1 25 UNP A0A087WN A0A087WNH4_ 1 25 SEQRES 1 n 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 n 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET n 1 237.684 278.549 255.086 1.00108.18 ATOM 2 CA MET n 1 236.691 278.252 254.063 1.00108.18 ATOM 3 C MET n 1 236.380 279.487 253.224 1.00108.18 ATOM 4 O MET n 1 235.551 280.310 253.608 1.00108.18 ATOM 5 CB MET n 1 235.411 277.714 254.704 1.00108.18 ATOM 6 CG MET n 1 235.612 276.465 255.550 1.00108.18 ATOM 7 SD MET n 1 236.605 276.750 257.030 1.00108.18 ATOM 8 CE MET n 1 235.913 275.534 258.150 1.00108.18 ATOM 9 N ARG n 2 237.054 279.615 252.083 1.00103.51 ATOM 10 CA ARG n 2 236.784 280.725 251.181 1.00103.51 ATOM 11 C ARG n 2 235.339 280.669 250.705 1.00103.51 ATOM 12 O ARG n 2 234.782 279.591 250.472 1.00103.51 ATOM 13 CB ARG n 2 237.753 280.695 249.993 1.00103.51 ATOM 14 CG ARG n 2 237.361 281.571 248.799 1.00103.51 ATOM 15 CD ARG n 2 237.363 283.065 249.115 1.00103.51 ATOM 16 NE ARG n 2 236.567 283.820 248.150 1.00103.51 ATOM 17 CZ ARG n 2 236.806 285.072 247.785 1.00103.51 ATOM 18 NH1 ARG n 2 237.813 285.762 248.294 1.00103.51 ATOM 19 NH2 ARG n 2 236.012 285.648 246.887 1.00103.51 ATOM 20 N ALA n 3 234.726 281.848 250.582 1.00105.04 ATOM 21 CA ALA n 3 233.311 281.922 250.240 1.00105.04 ATOM 22 C ALA n 3 233.034 281.319 248.871 1.00105.04 ATOM 23 O ALA n 3 232.019 280.644 248.681 1.00105.04 ATOM 24 CB ALA n 3 232.835 283.371 250.293 1.00105.04 ATOM 25 N LYS n 4 233.915 281.559 247.899 1.00102.68 ATOM 26 CA LYS n 4 233.683 281.020 246.564 1.00102.68 ATOM 27 C LYS n 4 233.779 279.498 246.554 1.00102.68 ATOM 28 O LYS n 4 232.986 278.825 245.885 1.00102.68 ATOM 29 CB LYS n 4 234.662 281.637 245.567 1.00102.68 ATOM 30 CG LYS n 4 233.980 282.254 244.351 1.00102.68 ATOM 31 CD LYS n 4 233.125 283.467 244.728 1.00102.68 ATOM 32 CE LYS n 4 232.386 284.030 243.516 1.00102.68 ATOM 33 NZ LYS n 4 231.757 285.353 243.777 1.00102.68 ATOM 34 N TRP n 5 234.736 278.934 247.292 1.00102.38 ATOM 35 CA TRP n 5 234.823 277.480 247.378 1.00102.38 ATOM 36 C TRP n 5 233.609 276.898 248.093 1.00102.38 ATOM 37 O TRP n 5 233.095 275.843 247.701 1.00102.38 ATOM 38 CB TRP n 5 236.122 277.071 248.070 1.00102.38 ATOM 39 CG TRP n 5 237.279 276.987 247.119 1.00102.38 ATOM 40 CD1 TRP n 5 237.741 277.979 246.308 1.00102.38 ATOM 41 CD2 TRP n 5 238.109 275.844 246.867 1.00102.38 ATOM 42 NE1 TRP n 5 238.810 277.532 245.573 1.00102.38 ATOM 43 CE2 TRP n 5 239.056 276.223 245.897 1.00102.38 ATOM 44 CE3 TRP n 5 238.144 274.539 247.370 1.00102.38 ATOM 45 CZ2 TRP n 5 240.029 275.344 245.418 1.00102.38 ATOM 46 CZ3 TRP n 5 239.112 273.668 246.893 1.00102.38 ATOM 47 CH2 TRP n 5 240.040 274.076 245.928 1.00102.38 ATOM 48 N ARG n 6 233.129 277.576 249.139 1.00104.57 ATOM 49 CA ARG n 6 231.909 277.125 249.801 1.00104.57 ATOM 50 C ARG n 6 230.718 277.184 248.853 1.00104.57 ATOM 51 O ARG n 6 229.854 276.301 248.873 1.00104.57 ATOM 52 CB ARG n 6 231.637 277.965 251.047 1.00104.57 ATOM 53 CG ARG n 6 230.427 277.497 251.836 1.00104.57 ATOM 54 CD ARG n 6 230.497 277.945 253.281 1.00104.57 ATOM 55 NE ARG n 6 231.218 279.203 253.424 1.00104.57 ATOM 56 CZ ARG n 6 230.650 280.399 253.366 1.00104.57 ATOM 57 NH1 ARG n 6 229.350 280.538 253.161 1.00104.57 ATOM 58 NH2 ARG n 6 231.405 281.484 253.517 1.00104.57 ATOM 59 N LYS n 7 230.651 278.224 248.023 1.00103.23 ATOM 60 CA LYS n 7 229.575 278.329 247.045 1.00103.23 ATOM 61 C LYS n 7 229.654 277.207 246.020 1.00103.23 ATOM 62 O LYS n 7 228.624 276.665 245.605 1.00103.23 ATOM 63 CB LYS n 7 229.625 279.693 246.361 1.00103.23 ATOM 64 CG LYS n 7 228.806 279.788 245.090 1.00103.23 ATOM 65 CD LYS n 7 228.267 281.191 244.895 1.00103.23 ATOM 66 CE LYS n 7 228.780 281.805 243.609 1.00103.23 ATOM 67 NZ LYS n 7 228.741 283.291 243.662 1.00103.23 ATOM 68 N LYS n 8 230.866 276.849 245.595 1.00103.57 ATOM 69 CA LYS n 8 231.025 275.716 244.688 1.00103.57 ATOM 70 C LYS n 8 230.549 274.423 245.338 1.00103.57 ATOM 71 O LYS n 8 229.866 273.608 244.702 1.00103.57 ATOM 72 CB LYS n 8 232.485 275.590 244.256 1.00103.57 ATOM 73 CG LYS n 8 232.733 275.926 242.798 1.00103.57 ATOM 74 CD LYS n 8 233.969 275.215 242.281 1.00103.57 ATOM 75 CE LYS n 8 233.800 273.707 242.350 1.00103.57 ATOM 76 NZ LYS n 8 235.093 272.991 242.187 1.00103.57 ATOM 77 N ARG n 9 230.902 274.221 246.608 1.00103.04 ATOM 78 CA ARG n 9 230.429 273.041 247.324 1.00103.04 ATOM 79 C ARG n 9 228.909 273.023 247.408 1.00103.04 ATOM 80 O ARG n 9 228.279 271.974 247.226 1.00103.04 ATOM 81 CB ARG n 9 231.039 272.994 248.723 1.00103.04 ATOM 82 CG ARG n 9 230.575 271.808 249.542 1.00103.04 ATOM 83 CD ARG n 9 230.940 271.960 251.005 1.00103.04 ATOM 84 NE ARG n 9 232.374 271.831 251.226 1.00103.04 ATOM 85 CZ ARG n 9 232.938 271.720 252.420 1.00103.04 ATOM 86 NH1 ARG n 9 232.214 271.713 253.527 1.00103.04 ATOM 87 NH2 ARG n 9 234.260 271.610 252.506 1.00103.04 ATOM 88 N MET n 10 228.305 274.178 247.685 1.00105.29 ATOM 89 CA MET n 10 226.852 274.259 247.761 1.00105.29 ATOM 90 C MET n 10 226.221 273.950 246.410 1.00105.29 ATOM 91 O MET n 10 225.203 273.255 246.340 1.00105.29 ATOM 92 CB MET n 10 226.435 275.647 248.249 1.00105.29 ATOM 93 CG MET n 10 225.809 275.709 249.651 1.00105.29 ATOM 94 SD MET n 10 224.485 274.581 250.162 1.00105.29 ATOM 95 CE MET n 10 223.547 274.319 248.662 1.00105.29 ATOM 96 N ARG n 11 226.811 274.455 245.327 1.00102.71 ATOM 97 CA ARG n 11 226.286 274.174 243.996 1.00102.71 ATOM 98 C ARG n 11 226.333 272.681 243.698 1.00102.71 ATOM 99 O ARG n 11 225.364 272.107 243.186 1.00102.71 ATOM 100 CB ARG n 11 227.070 274.963 242.946 1.00102.71 ATOM 101 CG ARG n 11 226.777 274.566 241.503 1.00102.71 ATOM 102 CD ARG n 11 225.995 275.648 240.764 1.00102.71 ATOM 103 NE ARG n 11 225.972 275.436 239.319 1.00102.71 ATOM 104 CZ ARG n 11 225.012 274.796 238.666 1.00102.71 ATOM 105 NH1 ARG n 11 223.971 274.280 239.297 1.00102.71 ATOM 106 NH2 ARG n 11 225.099 274.668 237.345 1.00102.71 ATOM 107 N ARG n 12 227.450 272.031 244.031 1.00103.61 ATOM 108 CA ARG n 12 227.548 270.590 243.812 1.00103.61 ATOM 109 C ARG n 12 226.517 269.832 244.639 1.00103.61 ATOM 110 O ARG n 12 225.868 268.900 244.142 1.00103.61 ATOM 111 CB ARG n 12 228.955 270.098 244.146 1.00103.61 ATOM 112 CG ARG n 12 230.034 270.609 243.217 1.00103.61 ATOM 113 CD ARG n 12 231.189 269.628 243.145 1.00103.61 ATOM 114 NE ARG n 12 231.777 269.382 244.455 1.00103.61 ATOM 115 CZ ARG n 12 232.957 269.843 244.845 1.00103.61 ATOM 116 NH1 ARG n 12 233.706 270.587 244.047 1.00103.61 ATOM 117 NH2 ARG n 12 233.398 269.551 246.065 1.00103.61 ATOM 118 N LEU n 13 226.351 270.216 245.904 1.00102.17 ATOM 119 CA LEU n 13 225.414 269.509 246.767 1.00102.17 ATOM 120 C LEU n 13 223.981 269.700 246.281 1.00102.17 ATOM 121 O LEU n 13 223.181 268.760 246.308 1.00102.17 ATOM 122 CB LEU n 13 225.600 269.983 248.213 1.00102.17 ATOM 123 CG LEU n 13 224.931 269.368 249.452 1.00102.17 ATOM 124 CD1 LEU n 13 225.361 270.142 250.684 1.00102.17 ATOM 125 CD2 LEU n 13 223.422 269.315 249.398 1.00102.17 ATOM 126 N LYS n 14 223.639 270.907 245.826 1.00101.80 ATOM 127 CA LYS n 14 222.299 271.146 245.298 1.00101.80 ATOM 128 C LYS n 14 222.069 270.370 244.007 1.00101.80 ATOM 129 O LYS n 14 220.965 269.865 243.769 1.00101.80 ATOM 130 CB LYS n 14 222.073 272.643 245.080 1.00101.80 ATOM 131 CG LYS n 14 220.613 273.082 245.182 1.00101.80 ATOM 132 CD LYS n 14 220.360 273.967 246.405 1.00101.80 ATOM 133 CE LYS n 14 218.906 273.890 246.878 1.00101.80 ATOM 134 NZ LYS n 14 218.742 274.254 248.315 1.00101.80 ATOM 135 N ARG n 15 223.098 270.265 243.160 1.00102.38 ATOM 136 CA ARG n 15 222.987 269.422 241.974 1.00102.38 ATOM 137 C ARG n 15 222.686 267.983 242.360 1.00102.38 ATOM 138 O ARG n 15 221.805 267.343 241.773 1.00102.38 ATOM 139 CB ARG n 15 224.275 269.481 241.155 1.00102.38 ATOM 140 CG ARG n 15 224.376 268.369 240.122 1.00102.38 ATOM 141 CD ARG n 15 225.387 268.645 239.011 1.00102.38 ATOM 142 NE ARG n 15 225.489 270.049 238.632 1.00102.38 ATOM 143 CZ ARG n 15 226.455 270.864 239.034 1.00102.38 ATOM 144 NH1 ARG n 15 227.422 270.447 239.835 1.00102.38 ATOM 145 NH2 ARG n 15 226.454 272.126 238.616 1.00102.38 ATOM 146 N LYS n 16 223.406 267.460 243.353 1.00101.90 ATOM 147 CA LYS n 16 223.166 266.091 243.796 1.00101.90 ATOM 148 C LYS n 16 221.759 265.931 244.360 1.00101.90 ATOM 149 O LYS n 16 221.082 264.931 244.089 1.00101.90 ATOM 150 CB LYS n 16 224.211 265.691 244.834 1.00101.90 ATOM 151 CG LYS n 16 223.865 264.437 245.618 1.00101.90 ATOM 152 CD LYS n 16 225.069 263.864 246.366 1.00101.90 ATOM 153 CE LYS n 16 226.392 263.996 245.608 1.00101.90 ATOM 154 NZ LYS n 16 226.331 263.576 244.175 1.00101.90 ATOM 155 N ARG n 17 221.301 266.910 245.143 1.00102.01 ATOM 156 CA ARG n 17 219.965 266.833 245.724 1.00102.01 ATOM 157 C ARG n 17 218.897 266.811 244.642 1.00102.01 ATOM 158 O ARG n 17 217.949 266.018 244.704 1.00102.01 ATOM 159 CB ARG n 17 219.723 268.004 246.675 1.00102.01 ATOM 160 CG ARG n 17 220.119 267.742 248.112 1.00102.01 ATOM 161 CD ARG n 17 219.253 268.552 249.061 1.00102.01 ATOM 162 NE ARG n 17 220.029 269.397 249.959 1.00102.01 ATOM 163 CZ ARG n 17 220.374 270.648 249.692 1.00102.01 ATOM 164 NH1 ARG n 17 220.032 271.231 248.556 1.00102.01 ATOM 165 NH2 ARG n 17 221.081 271.330 250.588 1.00102.01 ATOM 166 N ARG n 18 219.028 267.680 243.639 1.00101.39 ATOM 167 CA ARG n 18 218.012 267.715 242.595 1.00101.39 ATOM 168 C ARG n 18 218.079 266.476 241.715 1.00101.39 ATOM 169 O ARG n 18 217.041 265.999 241.245 1.00101.39 ATOM 170 CB ARG n 18 218.133 268.998 241.767 1.00101.39 ATOM 171 CG ARG n 18 218.943 268.892 240.492 1.00101.39 ATOM 172 CD ARG n 18 218.753 270.139 239.644 1.00101.39 ATOM 173 NE ARG n 18 219.957 270.511 238.912 1.00101.39 ATOM 174 CZ ARG n 18 220.901 271.315 239.382 1.00101.39 ATOM 175 NH1 ARG n 18 220.815 271.849 240.588 1.00101.39 ATOM 176 NH2 ARG n 18 221.955 271.593 238.620 1.00101.39 ATOM 177 N LYS n 19 219.274 265.916 241.513 1.00100.63 ATOM 178 CA LYS n 19 219.374 264.654 240.788 1.00100.63 ATOM 179 C LYS n 19 218.666 263.535 241.540 1.00100.63 ATOM 180 O LYS n 19 217.933 262.739 240.941 1.00100.63 ATOM 181 CB LYS n 19 220.842 264.303 240.558 1.00100.63 ATOM 182 CG LYS n 19 221.064 263.031 239.767 1.00100.63 ATOM 183 CD LYS n 19 221.320 263.344 238.304 1.00100.63 ATOM 184 CE LYS n 19 222.752 263.802 238.077 1.00100.63 ATOM 185 NZ LYS n 19 223.680 262.659 237.855 1.00100.63 ATOM 186 N MET n 20 218.864 263.468 242.857 1.00101.42 ATOM 187 CA MET n 20 218.191 262.449 243.655 1.00101.42 ATOM 188 C MET n 20 216.678 262.633 243.630 1.00101.42 ATOM 189 O MET n 20 215.929 261.656 243.507 1.00101.42 ATOM 190 CB MET n 20 218.714 262.483 245.090 1.00101.42 ATOM 191 CG MET n 20 217.744 261.936 246.117 1.00101.42 ATOM 192 SD MET n 20 217.713 260.135 246.141 1.00101.42 ATOM 193 CE MET n 20 219.458 259.767 245.992 1.00101.42 ATOM 194 N ARG n 21 216.209 263.877 243.749 1.00 98.60 ATOM 195 CA ARG n 21 214.770 264.123 243.721 1.00 98.60 ATOM 196 C ARG n 21 214.175 263.753 242.369 1.00 98.60 ATOM 197 O ARG n 21 213.084 263.176 242.304 1.00 98.60 ATOM 198 CB ARG n 21 214.476 265.585 244.059 1.00 98.60 ATOM 199 CG ARG n 21 212.995 265.911 244.222 1.00 98.60 ATOM 200 CD ARG n 21 212.600 266.019 245.693 1.00 98.60 ATOM 201 NE ARG n 21 211.531 265.094 246.061 1.00 98.60 ATOM 202 CZ ARG n 21 211.171 264.819 247.307 1.00 98.60 ATOM 203 NH1 ARG n 21 211.792 265.360 248.343 1.00 98.60 ATOM 204 NH2 ARG n 21 210.163 263.980 247.520 1.00 98.60 ATOM 205 N GLN n 22 214.877 264.073 241.280 1.00 99.80 ATOM 206 CA GLN n 22 214.402 263.693 239.954 1.00 99.80 ATOM 207 C GLN n 22 214.347 262.180 239.799 1.00 99.80 ATOM 208 O GLN n 22 213.380 261.639 239.251 1.00 99.80 ATOM 209 CB GLN n 22 215.304 264.303 238.884 1.00 99.80 ATOM 210 CG GLN n 22 215.201 263.626 237.533 1.00 99.80 ATOM 211 CD GLN n 22 215.874 264.419 236.437 1.00 99.80 ATOM 212 OE1 GLN n 22 216.933 265.010 236.644 1.00 99.80 ATOM 213 NE2 GLN n 22 215.260 264.441 235.260 1.00 99.80 ATOM 214 N ARG n 23 215.379 261.480 240.273 1.00 95.77 ATOM 215 CA ARG n 23 215.396 260.026 240.161 1.00 95.77 ATOM 216 C ARG n 23 214.265 259.400 240.965 1.00 95.77 ATOM 217 O ARG n 23 213.630 258.439 240.515 1.00 95.77 ATOM 218 CB ARG n 23 216.755 259.491 240.610 1.00 95.77 ATOM 219 CG ARG n 23 216.774 258.040 241.042 1.00 95.77 ATOM 220 CD ARG n 23 217.987 257.770 241.925 1.00 95.77 ATOM 221 NE ARG n 23 217.899 256.528 242.685 1.00 95.77 ATOM 222 CZ ARG n 23 217.794 255.316 242.155 1.00 95.77 ATOM 223 NH1 ARG n 23 217.799 255.126 240.845 1.00 95.77 ATOM 224 NH2 ARG n 23 217.701 254.263 242.960 1.00 95.77 ATOM 225 N SER n 24 213.996 259.932 242.159 1.00100.61 ATOM 226 CA SER n 24 212.876 259.436 242.951 1.00100.61 ATOM 227 C SER n 24 211.545 259.713 242.263 1.00100.61 ATOM 228 O SER n 24 210.648 258.863 242.264 1.00100.61 ATOM 229 CB SER n 24 212.895 260.065 244.343 1.00100.61 ATOM 230 OG SER n 24 212.404 261.393 244.303 1.00100.61 ATOM 231 N LYS n 25 211.397 260.895 241.676 1.00100.69 ATOM 232 CA LYS n 25 210.154 261.269 241.012 1.00100.69 ATOM 233 C LYS n 25 209.937 260.453 239.743 1.00100.69 ATOM 234 O LYS n 25 210.636 260.640 238.747 1.00100.69 ATOM 235 CB LYS n 25 210.152 262.763 240.686 1.00100.69 ATOM 236 CG LYS n 25 208.981 263.215 239.830 1.00100.69 ATOM 237 CD LYS n 25 209.442 263.638 238.447 1.00100.69 ATOM 238 CE LYS n 25 210.329 264.870 238.519 1.00100.69 ATOM 239 NZ LYS n 25 210.799 265.294 237.173 1.00100.69 TER