HEADER TRANSCRIPTION 31-DEC-69 8BVW TITLE RNA polymerase II pre-initiation complex with the distal +1 TITLE 2 nucleosome (PIC-Nuc18W) COMPND MOL_ID: 6; COMPND 2 MOLECULE: General transcription factor IIH subunit 3; COMPND 3 CHAIN: 5; COMPND 4 ENGINEERED: YES; EXPDTA ELECTRON MICROSCOPY DBREF 8BVW 5 1 308 UNP Q13889 TF2H3_HUMAN 1 308 SEQRES 1 5 28 GLY TYR VAL CYS SER VAL CYS LEU SER ILE PHE CYS ASN SEQRES 2 5 28 PHE SER PRO ILE CYS THR THR CYS GLU THR ALA PHE LYS SEQRES 3 5 28 ILE SER ATOM 1 N GLY 5 265 261.681 226.213 107.104 1.00 50.90 ATOM 2 CA GLY 5 265 260.834 227.128 106.362 1.00 50.90 ATOM 3 C GLY 5 265 260.112 228.012 107.354 1.00 50.90 ATOM 4 O GLY 5 265 259.847 227.612 108.489 1.00 50.90 ATOM 5 N TYR 5 266 259.789 229.226 106.918 1.00 56.32 ATOM 6 CA TYR 5 266 259.120 230.186 107.789 1.00 56.32 ATOM 7 C TYR 5 266 257.665 230.326 107.362 1.00 56.32 ATOM 8 O TYR 5 266 257.372 230.859 106.286 1.00 56.32 ATOM 9 CB TYR 5 266 259.812 231.550 107.741 1.00 56.32 ATOM 10 CG TYR 5 266 261.314 231.564 107.985 1.00 56.32 ATOM 11 CD1 TYR 5 266 261.995 230.435 108.427 1.00 56.32 ATOM 12 CD2 TYR 5 266 262.048 232.724 107.774 1.00 56.32 ATOM 13 CE1 TYR 5 266 263.363 230.455 108.625 1.00 56.32 ATOM 14 CE2 TYR 5 266 263.412 232.758 107.987 1.00 56.32 ATOM 15 CZ TYR 5 266 264.064 231.622 108.412 1.00 56.32 ATOM 16 OH TYR 5 266 265.421 231.657 108.634 1.00 56.32 ATOM 17 N VAL 5 267 256.763 229.847 108.210 1.00 53.21 ATOM 18 CA VAL 5 267 255.341 229.942 107.969 1.00 53.21 ATOM 19 C VAL 5 267 254.792 231.109 108.783 1.00 53.21 ATOM 20 O VAL 5 267 255.451 231.640 109.673 1.00 53.21 ATOM 21 CB VAL 5 267 254.609 228.617 108.290 1.00 53.21 ATOM 22 CG1 VAL 5 267 255.245 227.464 107.529 1.00 53.21 ATOM 23 CG2 VAL 5 267 254.623 228.345 109.779 1.00 53.21 ATOM 24 N CYS 5 268 253.566 231.516 108.474 1.00 59.54 ATOM 25 CA CYS 5 268 252.889 232.581 109.197 1.00 59.54 ATOM 26 C CYS 5 268 251.541 232.087 109.702 1.00 59.54 ATOM 27 O CYS 5 268 250.907 231.228 109.087 1.00 59.54 ATOM 28 CB CYS 5 268 252.706 233.823 108.319 1.00 59.54 ATOM 29 SG CYS 5 268 251.805 233.513 106.793 1.00 59.54 ATOM 30 N SER 5 269 251.108 232.641 110.831 1.00 53.69 ATOM 31 CA SER 5 269 249.860 232.244 111.487 1.00 53.69 ATOM 32 C SER 5 269 248.610 232.711 110.736 1.00 53.69 ATOM 33 O SER 5 269 247.507 232.666 111.300 1.00 53.69 ATOM 34 CB SER 5 269 249.834 232.775 112.921 1.00 53.69 ATOM 35 OG SER 5 269 248.953 232.015 113.730 1.00 53.69 ATOM 36 N VAL 5 270 248.766 233.154 109.490 1.00 52.75 ATOM 37 CA VAL 5 270 247.657 233.603 108.655 1.00 52.75 ATOM 38 C VAL 5 270 247.691 232.850 107.333 1.00 52.75 ATOM 39 O VAL 5 270 246.769 232.091 107.014 1.00 52.75 ATOM 40 CB VAL 5 270 247.703 235.125 108.427 1.00 52.75 ATOM 41 CG1 VAL 5 270 246.609 235.544 107.458 1.00 52.75 ATOM 42 CG2 VAL 5 270 247.545 235.856 109.744 1.00 52.75 ATOM 43 N CYS 5 271 248.752 233.055 106.552 1.00 56.93 ATOM 44 CA CYS 5 271 248.879 232.385 105.265 1.00 56.93 ATOM 45 C CYS 5 271 249.344 230.943 105.395 1.00 56.93 ATOM 46 O CYS 5 271 249.113 230.152 104.474 1.00 56.93 ATOM 47 CB CYS 5 271 249.873 233.138 104.381 1.00 56.93 ATOM 48 SG CYS 5 271 249.755 234.927 104.493 1.00 56.93 ATOM 49 N LEU 5 272 249.970 230.585 106.520 1.00 54.81 ATOM 50 CA LEU 5 272 250.454 229.225 106.774 1.00 54.81 ATOM 51 C LEU 5 272 251.250 228.680 105.589 1.00 54.81 ATOM 52 O LEU 5 272 251.222 227.484 105.291 1.00 54.81 ATOM 53 CB LEU 5 272 249.295 228.291 107.136 1.00 54.81 ATOM 54 CG LEU 5 272 249.651 227.037 107.937 1.00 54.81 ATOM 55 CD1 LEU 5 272 250.156 227.421 109.319 1.00 54.81 ATOM 56 CD2 LEU 5 272 248.454 226.105 108.041 1.00 54.81 ATOM 57 N SER 5 273 251.964 229.564 104.900 1.00 53.72 ATOM 58 CA SER 5 273 252.710 229.217 103.701 1.00 53.72 ATOM 59 C SER 5 273 254.202 229.250 103.993 1.00 53.72 ATOM 60 O SER 5 273 254.684 230.130 104.712 1.00 53.72 ATOM 61 CB SER 5 273 252.383 230.180 102.558 1.00 53.72 ATOM 62 OG SER 5 273 251.042 230.025 102.138 1.00 53.72 ATOM 63 N ILE 5 274 254.928 228.284 103.437 1.00 48.81 ATOM 64 CA ILE 5 274 256.355 228.155 103.706 1.00 48.81 ATOM 65 C ILE 5 274 257.087 229.188 102.856 1.00 48.81 ATOM 66 O ILE 5 274 257.145 229.068 101.631 1.00 48.81 ATOM 67 CB ILE 5 274 256.855 226.737 103.410 1.00 48.81 ATOM 68 CG1 ILE 5 274 256.037 225.711 104.196 1.00 48.81 ATOM 69 CG2 ILE 5 274 258.332 226.613 103.745 1.00 48.81 ATOM 70 CD1 ILE 5 274 256.315 224.279 103.797 1.00 48.81 ATOM 71 N PHE 5 275 257.599 230.230 103.498 1.00 54.10 ATOM 72 CA PHE 5 275 258.392 231.250 102.831 1.00 54.10 ATOM 73 C PHE 5 275 259.881 230.948 102.968 1.00 54.10 ATOM 74 O PHE 5 275 260.317 230.245 103.884 1.00 54.10 ATOM 75 CB PHE 5 275 258.048 232.638 103.375 1.00 54.10 ATOM 76 CG PHE 5 275 256.646 233.067 103.047 1.00 54.10 ATOM 77 CD1 PHE 5 275 256.327 233.517 101.775 1.00 54.10 ATOM 78 CD2 PHE 5 275 255.642 232.990 103.996 1.00 54.10 ATOM 79 CE1 PHE 5 275 255.038 233.899 101.464 1.00 54.10 ATOM 80 CE2 PHE 5 275 254.352 233.371 103.690 1.00 54.10 ATOM 81 CZ PHE 5 275 254.049 233.822 102.421 1.00 54.10 ATOM 82 N CYS 5 276 260.662 231.495 102.034 1.00 64.24 ATOM 83 CA CYS 5 276 262.102 231.250 102.027 1.00 64.24 ATOM 84 C CYS 5 276 262.803 231.986 103.160 1.00 64.24 ATOM 85 O CYS 5 276 263.726 231.444 103.778 1.00 64.24 ATOM 86 CB CYS 5 276 262.731 231.627 100.691 1.00 64.24 ATOM 87 SG CYS 5 276 264.460 231.115 100.629 1.00 64.24 ATOM 88 N ASN 5 277 262.383 233.213 103.453 1.00 59.42 ATOM 89 CA ASN 5 277 263.025 233.986 104.505 1.00 59.42 ATOM 90 C ASN 5 277 262.057 235.039 105.022 1.00 59.42 ATOM 91 O ASN 5 277 260.998 235.287 104.439 1.00 59.42 ATOM 92 CB ASN 5 277 264.313 234.638 103.991 1.00 59.42 ATOM 93 CG ASN 5 277 265.301 234.935 105.095 1.00 59.42 ATOM 94 OD1 ASN 5 277 264.982 234.837 106.280 1.00 59.42 ATOM 95 ND2 ASN 5 277 266.511 235.313 104.711 1.00 59.42 ATOM 96 N PHE 5 278 262.444 235.650 106.141 1.00 60.62 ATOM 97 CA PHE 5 278 261.642 236.691 106.766 1.00 60.62 ATOM 98 C PHE 5 278 261.392 237.855 105.818 1.00 60.62 ATOM 99 O PHE 5 278 262.294 238.318 105.115 1.00 60.62 ATOM 100 CB PHE 5 278 262.346 237.193 108.028 1.00 60.62 ATOM 101 CG PHE 5 278 261.852 238.525 108.509 1.00 60.62 ATOM 102 CD1 PHE 5 278 260.564 238.672 108.991 1.00 60.62 ATOM 103 CD2 PHE 5 278 262.679 239.635 108.469 1.00 60.62 ATOM 104 CE1 PHE 5 278 260.116 239.905 109.427 1.00 60.62 ATOM 105 CE2 PHE 5 278 262.235 240.865 108.905 1.00 60.62 ATOM 106 CZ PHE 5 278 260.953 241.000 109.385 1.00 60.62 ATOM 107 N SER 5 279 260.146 238.327 105.811 1.00 53.77 ATOM 108 CA SER 5 279 259.730 239.506 105.081 1.00 53.77 ATOM 109 C SER 5 279 258.682 240.240 105.905 1.00 53.77 ATOM 110 O SER 5 279 257.858 239.599 106.574 1.00 53.77 ATOM 111 CB SER 5 279 259.153 239.147 103.705 1.00 53.77 ATOM 112 OG SER 5 279 258.590 240.284 103.076 1.00 53.77 ATOM 113 N PRO 5 280 258.692 241.574 105.883 1.00 53.34 ATOM 114 CA PRO 5 280 257.649 242.327 106.595 1.00 53.34 ATOM 115 C PRO 5 280 256.252 242.060 106.063 1.00 53.34 ATOM 116 O PRO 5 280 255.271 242.233 106.796 1.00 53.34 ATOM 117 CB PRO 5 280 258.062 243.797 106.390 1.00 53.34 ATOM 118 CG PRO 5 280 259.531 243.744 106.133 1.00 53.34 ATOM 119 CD PRO 5 280 259.717 242.466 105.337 1.00 53.34 ATOM 120 N ILE 5 281 256.135 241.657 104.801 1.00 52.33 ATOM 121 CA ILE 5 281 254.858 241.329 104.180 1.00 52.33 ATOM 122 C ILE 5 281 255.006 240.014 103.424 1.00 52.33 ATOM 123 O ILE 5 281 255.980 239.815 102.689 1.00 52.33 ATOM 124 CB ILE 5 281 254.359 242.454 103.248 1.00 52.33 ATOM 125 CG1 ILE 5 281 255.334 242.702 102.094 1.00 52.33 ATOM 126 CG2 ILE 5 281 254.108 243.737 104.035 1.00 52.33 ATOM 127 CD1 ILE 5 281 254.871 243.766 101.123 1.00 52.33 ATOM 128 N CYS 5 282 254.059 239.105 103.639 1.00 63.48 ATOM 129 CA CYS 5 282 254.049 237.821 102.950 1.00 63.48 ATOM 130 C CYS 5 282 253.415 238.007 101.577 1.00 63.48 ATOM 131 O CYS 5 282 252.279 238.477 101.473 1.00 63.48 ATOM 132 CB CYS 5 282 253.282 236.791 103.774 1.00 63.48 ATOM 133 SG CYS 5 282 251.624 237.311 104.269 1.00 63.48 ATOM 134 N THR 5 283 254.139 237.613 100.526 1.00 61.29 ATOM 135 CA THR 5 283 253.686 237.882 99.164 1.00 61.29 ATOM 136 C THR 5 283 252.298 237.327 98.869 1.00 61.29 ATOM 137 O THR 5 283 251.631 237.826 97.957 1.00 61.29 ATOM 138 CB THR 5 283 254.686 237.310 98.158 1.00 61.29 ATOM 139 OG1 THR 5 283 254.762 235.888 98.313 1.00 61.29 ATOM 140 CG2 THR 5 283 256.065 237.913 98.380 1.00 61.29 ATOM 141 N THR 5 284 251.840 236.315 99.607 1.00 58.85 ATOM 142 CA THR 5 284 250.521 235.770 99.318 1.00 58.85 ATOM 143 C THR 5 284 249.401 236.607 99.924 1.00 58.85 ATOM 144 O THR 5 284 248.260 236.523 99.458 1.00 58.85 ATOM 145 CB THR 5 284 250.421 234.330 99.826 1.00 58.85 ATOM 146 OG1 THR 5 284 250.717 234.294 101.228 1.00 58.85 ATOM 147 CG2 THR 5 284 251.403 233.435 99.083 1.00 58.85 ATOM 148 N CYS 5 285 249.702 237.407 100.949 1.00 61.38 ATOM 149 CA CYS 5 285 248.694 238.211 101.633 1.00 61.38 ATOM 150 C CYS 5 285 249.174 239.642 101.843 1.00 61.38 ATOM 151 O CYS 5 285 248.371 240.581 101.820 1.00 61.38 ATOM 152 CB CYS 5 285 248.312 237.581 102.971 1.00 61.38 ATOM 153 SG CYS 5 285 246.977 238.429 103.847 1.00 61.38 ATOM 154 N GLU 5 286 250.481 239.808 102.072 1.00 56.99 ATOM 155 CA GLU 5 286 251.099 241.113 102.326 1.00 56.99 ATOM 156 C GLU 5 286 250.604 241.734 103.627 1.00 56.99 ATOM 157 O GLU 5 286 250.534 242.959 103.756 1.00 56.99 ATOM 158 CB GLU 5 286 250.913 242.082 101.155 1.00 56.99 ATOM 159 CG GLU 5 286 251.514 241.582 99.856 1.00 56.99 ATOM 160 CD GLU 5 286 251.490 242.631 98.767 1.00 56.99 ATOM 161 OE1 GLU 5 286 250.819 243.667 98.952 1.00 56.99 ATOM 162 OE2 GLU 5 286 252.156 242.426 97.731 1.00 56.99 ATOM 163 N THR 5 287 250.248 240.894 104.597 1.00 54.09 ATOM 164 CA THR 5 287 249.859 241.402 105.903 1.00 54.09 ATOM 165 C THR 5 287 251.033 242.113 106.571 1.00 54.09 ATOM 166 O THR 5 287 252.203 241.813 106.320 1.00 54.09 ATOM 167 CB THR 5 287 249.352 240.253 106.777 1.00 54.09 ATOM 168 OG1 THR 5 287 248.817 240.770 108.003 1.00 54.09 ATOM 169 CG2 THR 5 287 250.468 239.255 107.058 1.00 54.09 ATOM 170 N ALA 5 288 250.699 243.079 107.430 1.00 50.52 ATOM 171 CA ALA 5 288 251.680 243.964 108.064 1.00 50.52 ATOM 172 C ALA 5 288 252.428 243.288 109.216 1.00 50.52 ATOM 173 O ALA 5 288 252.196 243.556 110.397 1.00 50.52 ATOM 174 CB ALA 5 288 250.995 245.239 108.536 1.00 50.52 ATOM 175 N PHE 5 289 253.344 242.389 108.863 1.00 60.07 ATOM 176 CA PHE 5 289 254.176 241.809 109.907 1.00 60.07 ATOM 177 C PHE 5 289 255.184 242.852 110.393 1.00 60.07 ATOM 178 O PHE 5 289 255.533 243.796 109.680 1.00 60.07 ATOM 179 CB PHE 5 289 254.890 240.550 109.408 1.00 60.07 ATOM 180 CG PHE 5 289 255.677 239.833 110.474 1.00 60.07 ATOM 181 CD1 PHE 5 289 255.189 239.721 111.765 1.00 60.07 ATOM 182 CD2 PHE 5 289 256.906 239.268 110.181 1.00 60.07 ATOM 183 CE1 PHE 5 289 255.921 239.077 112.743 1.00 60.07 ATOM 184 CE2 PHE 5 289 257.633 238.609 111.157 1.00 60.07 ATOM 185 CZ PHE 5 289 257.139 238.513 112.437 1.00 60.07 ATOM 186 N LYS 5 290 255.657 242.671 111.623 1.00 58.00 ATOM 187 CA LYS 5 290 256.622 243.573 112.231 1.00 58.00 ATOM 188 C LYS 5 290 257.966 242.877 112.407 1.00 58.00 ATOM 189 O LYS 5 290 258.033 241.665 112.635 1.00 58.00 ATOM 190 CB LYS 5 290 256.115 244.091 113.582 1.00 58.00 ATOM 191 CG LYS 5 290 256.119 243.058 114.697 1.00 58.00 ATOM 192 CD LYS 5 290 255.658 243.665 116.011 1.00 58.00 ATOM 193 CE LYS 5 290 254.165 243.950 115.992 1.00 58.00 ATOM 194 NZ LYS 5 290 253.361 242.698 116.055 1.00 58.00 ATOM 195 N ILE 5 291 259.040 243.658 112.264 1.00 60.16 ATOM 196 CA ILE 5 291 260.383 243.127 112.448 1.00 60.16 ATOM 197 C ILE 5 291 260.524 242.527 113.846 1.00 60.16 ATOM 198 O ILE 5 291 259.912 242.994 114.816 1.00 60.16 ATOM 199 CB ILE 5 291 261.442 244.216 112.204 1.00 60.16 ATOM 200 CG1 ILE 5 291 261.287 245.357 113.212 1.00 60.16 ATOM 201 CG2 ILE 5 291 261.346 244.741 110.779 1.00 60.16 ATOM 202 CD1 ILE 5 291 262.453 246.321 113.225 1.00 60.16 ATOM 203 N SER 5 292 261.337 241.480 113.947 1.00 55.55 ATOM 204 CA SER 5 292 261.584 240.818 115.224 1.00 55.55 ATOM 205 C SER 5 292 262.844 239.961 115.162 1.00 55.55 ATOM 206 O SER 5 292 263.297 239.584 114.082 1.00 55.55 ATOM 207 CB SER 5 292 260.385 239.956 115.627 1.00 55.55 ATOM 208 OG SER 5 292 259.291 240.758 116.037 1.00 55.55 ATOM 209 ZN ZN 5 401 251.605 235.532 105.720 1.00 62.17 ATOM 210 ZN ZN 5 402 264.177 232.352 98.672 1.00 65.14 TER