HEADER LIGASE 31-DEC-69 8CDK TITLE CAND1 b-hairpin++-SCF-SKP2 CAND1 partly engaged SCF partly rocked COMPND MOL_ID: 5; COMPND 2 MOLECULE: S-phase kinase-associated protein 2; COMPND 3 CHAIN: F; COMPND 4 ENGINEERED: YES; COMPND 5 SKP2 N-terminal region not visible in EM density. The LRR region of COMPND 6 OTHER_DETAILS: SKP2 was wholesale docked from previous structure with all sidechains COMPND 7 removed.; EXPDTA ELECTRON MICROSCOPY DBREF 8CDK F 1 424 UNP Q13309 SKP2_HUMAN 1 424 SEQRES 1 F 40 SER TRP ASP SER LEU PRO ASP GLU LEU LEU LEU GLY ILE SEQRES 2 F 40 PHE SER CYS LEU CYS LEU PRO GLU LEU LEU LYS VAL SER SEQRES 3 F 40 GLY VAL CYS LYS ARG TRP TYR ARG LEU ALA SER ASP GLU SEQRES 4 F 40 SER ATOM 1 N SER F 96 94.475 201.961 157.380 1.00105.72 ATOM 2 CA SER F 96 95.166 202.051 158.661 1.00105.72 ATOM 3 C SER F 96 96.131 200.886 158.845 1.00105.72 ATOM 4 O SER F 96 95.881 199.779 158.371 1.00105.72 ATOM 5 CB SER F 96 94.160 202.088 159.813 1.00105.72 ATOM 6 OG SER F 96 94.822 202.143 161.064 1.00105.72 ATOM 7 N TRP F 97 97.239 201.145 159.537 1.00103.26 ATOM 8 CA TRP F 97 98.257 200.137 159.792 1.00103.26 ATOM 9 C TRP F 97 98.215 199.610 161.220 1.00103.26 ATOM 10 O TRP F 97 99.070 198.803 161.597 1.00103.26 ATOM 11 CB TRP F 97 99.644 200.701 159.483 1.00103.26 ATOM 12 CG TRP F 97 99.910 200.870 158.020 1.00103.26 ATOM 13 CD1 TRP F 97 98.984 201.011 157.028 1.00103.26 ATOM 14 CD2 TRP F 97 101.191 200.928 157.383 1.00103.26 ATOM 15 NE1 TRP F 97 99.608 201.147 155.813 1.00103.26 ATOM 16 CE2 TRP F 97 100.964 201.100 156.004 1.00103.26 ATOM 17 CE3 TRP F 97 102.507 200.849 157.845 1.00103.26 ATOM 18 CZ2 TRP F 97 102.002 201.194 155.083 1.00103.26 ATOM 19 CZ3 TRP F 97 103.537 200.943 156.929 1.00103.26 ATOM 20 CH2 TRP F 97 103.279 201.114 155.565 1.00103.26 ATOM 21 N ASP F 98 97.249 200.055 162.026 1.00105.00 ATOM 22 CA ASP F 98 97.123 199.533 163.382 1.00105.00 ATOM 23 C ASP F 98 96.769 198.052 163.369 1.00105.00 ATOM 24 O ASP F 98 97.322 197.266 164.147 1.00105.00 ATOM 25 CB ASP F 98 96.074 200.331 164.157 1.00105.00 ATOM 26 N SER F 99 95.849 197.653 162.492 1.00106.28 ATOM 27 CA SER F 99 95.466 196.248 162.351 1.00106.28 ATOM 28 C SER F 99 96.338 195.593 161.279 1.00106.28 ATOM 29 O SER F 99 95.907 195.291 160.164 1.00106.28 ATOM 30 CB SER F 99 93.983 196.130 162.025 1.00106.28 ATOM 31 OG SER F 99 93.649 196.901 160.883 1.00106.28 ATOM 32 N LEU F 100 97.598 195.377 161.645 1.00102.79 ATOM 33 CA LEU F 100 98.577 194.795 160.750 1.00102.79 ATOM 34 C LEU F 100 99.127 193.508 161.349 1.00102.79 ATOM 35 O LEU F 100 99.567 193.509 162.507 1.00102.79 ATOM 36 CB LEU F 100 99.726 195.780 160.484 1.00102.79 ATOM 37 CG LEU F 100 100.769 195.344 159.453 1.00102.79 ATOM 38 CD1 LEU F 100 100.131 195.179 158.083 1.00102.79 ATOM 39 CD2 LEU F 100 101.918 196.338 159.398 1.00102.79 ATOM 40 N PRO F 101 99.108 192.399 160.612 1.00101.18 ATOM 41 CA PRO F 101 99.698 191.160 161.130 1.00101.18 ATOM 42 C PRO F 101 101.184 191.327 161.406 1.00101.18 ATOM 43 O PRO F 101 101.885 192.069 160.715 1.00101.18 ATOM 44 CB PRO F 101 99.443 190.151 160.005 1.00101.18 ATOM 45 CG PRO F 101 98.251 190.694 159.291 1.00101.18 ATOM 46 CD PRO F 101 98.414 192.184 159.332 1.00101.18 ATOM 47 N ASP F 102 101.659 190.624 162.435 1.00101.51 ATOM 48 CA ASP F 102 103.045 190.779 162.863 1.00101.51 ATOM 49 C ASP F 102 104.020 190.289 161.800 1.00101.51 ATOM 50 O ASP F 102 105.131 190.816 161.679 1.00101.51 ATOM 51 CB ASP F 102 103.271 190.036 164.180 1.00101.51 ATOM 52 N GLU F 103 103.628 189.272 161.029 1.00101.28 ATOM 53 CA GLU F 103 104.541 188.697 160.045 1.00101.28 ATOM 54 C GLU F 103 104.919 189.713 158.975 1.00101.28 ATOM 55 O GLU F 103 106.094 189.826 158.602 1.00101.28 ATOM 56 CB GLU F 103 103.912 187.457 159.409 1.00101.28 ATOM 57 N LEU F 104 103.940 190.467 158.473 1.00104.07 ATOM 58 CA LEU F 104 104.224 191.445 157.429 1.00104.07 ATOM 59 C LEU F 104 105.143 192.547 157.943 1.00104.07 ATOM 60 O LEU F 104 106.101 192.938 157.266 1.00104.07 ATOM 61 CB LEU F 104 102.918 192.029 156.892 1.00104.07 ATOM 62 CG LEU F 104 101.913 191.010 156.350 1.00104.07 ATOM 63 CD1 LEU F 104 100.496 191.552 156.418 1.00104.07 ATOM 64 CD2 LEU F 104 102.269 190.616 154.927 1.00104.07 ATOM 65 N LEU F 105 104.871 193.056 159.146 1.00109.64 ATOM 66 CA LEU F 105 105.708 194.110 159.712 1.00109.64 ATOM 67 C LEU F 105 107.121 193.606 159.983 1.00109.64 ATOM 68 O LEU F 105 108.101 194.330 159.760 1.00109.64 ATOM 69 CB LEU F 105 105.062 194.655 160.986 1.00109.64 ATOM 70 CG LEU F 105 105.648 195.918 161.617 1.00109.64 ATOM 71 CD1 LEU F 105 104.536 196.786 162.183 1.00109.64 ATOM 72 CD2 LEU F 105 106.641 195.564 162.706 1.00109.64 ATOM 73 N LEU F 106 107.247 192.366 160.463 1.00107.26 ATOM 74 CA LEU F 106 108.567 191.780 160.658 1.00107.26 ATOM 75 C LEU F 106 109.306 191.652 159.333 1.00107.26 ATOM 76 O LEU F 106 110.521 191.869 159.266 1.00107.26 ATOM 77 CB LEU F 106 108.443 190.419 161.341 1.00107.26 ATOM 78 N GLY F 107 108.588 191.293 158.268 1.00108.31 ATOM 79 CA GLY F 107 109.206 191.259 156.954 1.00108.31 ATOM 80 C GLY F 107 109.681 192.625 156.498 1.00108.31 ATOM 81 O GLY F 107 110.755 192.754 155.905 1.00108.31 ATOM 82 N ILE F 108 108.882 193.663 156.758 1.00109.13 ATOM 83 CA ILE F 108 109.289 195.019 156.390 1.00109.13 ATOM 84 C ILE F 108 110.540 195.431 157.154 1.00109.13 ATOM 85 O ILE F 108 111.440 196.075 156.601 1.00109.13 ATOM 86 CB ILE F 108 108.139 196.021 156.608 1.00109.13 ATOM 87 CG1 ILE F 108 106.851 195.522 155.957 1.00109.13 ATOM 88 CG2 ILE F 108 108.515 197.390 156.063 1.00109.13 ATOM 89 CD1 ILE F 108 105.681 196.470 156.108 1.00109.13 ATOM 90 N PHE F 109 110.624 195.065 158.432 1.00116.48 ATOM 91 CA PHE F 109 111.773 195.416 159.258 1.00116.48 ATOM 92 C PHE F 109 113.035 194.638 158.895 1.00116.48 ATOM 93 O PHE F 109 114.090 194.880 159.490 1.00116.48 ATOM 94 CB PHE F 109 111.453 195.212 160.741 1.00116.48 ATOM 95 CG PHE F 109 110.560 196.267 161.327 1.00116.48 ATOM 96 CD1 PHE F 109 110.639 196.575 162.673 1.00116.48 ATOM 97 CD2 PHE F 109 109.661 196.964 160.540 1.00116.48 ATOM 98 CE1 PHE F 109 109.831 197.544 163.224 1.00116.48 ATOM 99 CE2 PHE F 109 108.851 197.935 161.086 1.00116.48 ATOM 100 CZ PHE F 109 108.938 198.225 162.429 1.00116.48 ATOM 101 N SER F 110 112.957 193.719 157.937 1.00115.73 ATOM 102 CA SER F 110 114.095 192.883 157.580 1.00115.73 ATOM 103 C SER F 110 115.114 193.600 156.705 1.00115.73 ATOM 104 O SER F 110 116.189 193.045 156.453 1.00115.73 ATOM 105 CB SER F 110 113.614 191.614 156.870 1.00115.73 ATOM 106 OG SER F 110 112.995 191.926 155.634 1.00115.73 ATOM 107 N CYS F 111 114.810 194.808 156.236 1.00120.34 ATOM 108 CA CYS F 111 115.720 195.569 155.390 1.00120.34 ATOM 109 C CYS F 111 116.082 196.924 155.985 1.00120.34 ATOM 110 O CYS F 111 116.682 197.754 155.293 1.00120.34 ATOM 111 CB CYS F 111 115.112 195.755 153.998 1.00120.34 ATOM 112 SG CYS F 111 114.842 194.215 153.090 1.00120.34 ATOM 113 N LEU F 112 115.736 197.169 157.246 1.00124.72 ATOM 114 CA LEU F 112 116.018 198.456 157.860 1.00124.72 ATOM 115 C LEU F 112 117.446 198.502 158.397 1.00124.72 ATOM 116 O LEU F 112 118.139 197.485 158.500 1.00124.72 ATOM 117 CB LEU F 112 115.024 198.742 158.986 1.00124.72 ATOM 118 N CYS F 113 117.883 199.711 158.741 1.00128.99 ATOM 119 CA CYS F 113 119.204 199.946 159.309 1.00128.99 ATOM 120 C CYS F 113 119.077 200.026 160.824 1.00128.99 ATOM 121 O CYS F 113 118.072 200.530 161.338 1.00128.99 ATOM 122 CB CYS F 113 119.820 201.229 158.751 1.00128.99 ATOM 123 SG CYS F 113 120.356 201.117 157.028 1.00128.99 ATOM 124 N LEU F 114 120.093 199.531 161.534 1.00128.47 ATOM 125 CA LEU F 114 120.073 199.491 162.994 1.00128.47 ATOM 126 C LEU F 114 119.836 200.856 163.646 1.00128.47 ATOM 127 O LEU F 114 119.095 200.916 164.636 1.00128.47 ATOM 128 CB LEU F 114 121.348 198.830 163.540 1.00128.47 ATOM 129 CG LEU F 114 122.752 199.435 163.551 1.00128.47 ATOM 130 CD1 LEU F 114 123.636 198.651 164.499 1.00128.47 ATOM 131 CD2 LEU F 114 123.350 199.385 162.155 1.00128.47 ATOM 132 N PRO F 115 120.411 201.983 163.154 1.00129.56 ATOM 133 CA PRO F 115 120.040 203.271 163.757 1.00129.56 ATOM 134 C PRO F 115 118.584 203.604 163.477 1.00129.56 ATOM 135 O PRO F 115 117.853 204.056 164.363 1.00129.56 ATOM 136 CB PRO F 115 120.991 204.275 163.088 1.00129.56 ATOM 137 CG PRO F 115 122.031 203.453 162.408 1.00129.56 ATOM 138 CD PRO F 115 121.342 202.190 162.032 1.00129.56 ATOM 139 N GLU F 116 118.155 203.363 162.236 1.00129.41 ATOM 140 CA GLU F 116 116.759 203.584 161.876 1.00129.41 ATOM 141 C GLU F 116 115.840 202.659 162.663 1.00129.41 ATOM 142 O GLU F 116 114.756 203.063 163.097 1.00129.41 ATOM 143 CB GLU F 116 116.569 203.386 160.372 1.00129.41 ATOM 144 N LEU F 117 116.255 201.402 162.845 1.00131.07 ATOM 145 CA LEU F 117 115.452 200.459 163.618 1.00131.07 ATOM 146 C LEU F 117 115.314 200.915 165.065 1.00131.07 ATOM 147 O LEU F 117 114.221 200.875 165.640 1.00131.07 ATOM 148 CB LEU F 117 116.072 199.063 163.547 1.00131.07 ATOM 149 N LEU F 118 116.418 201.359 165.670 1.00132.00 ATOM 150 CA LEU F 118 116.353 201.860 167.038 1.00132.00 ATOM 151 C LEU F 118 115.466 203.094 167.126 1.00132.00 ATOM 152 O LEU F 118 114.714 203.261 168.093 1.00132.00 ATOM 153 CB LEU F 118 117.760 202.169 167.551 1.00132.00 ATOM 154 N LYS F 119 115.545 203.974 166.125 1.00133.33 ATOM 155 CA LYS F 119 114.703 205.166 166.117 1.00133.33 ATOM 156 C LYS F 119 113.225 204.803 166.021 1.00133.33 ATOM 157 O LYS F 119 112.392 205.368 166.740 1.00133.33 ATOM 158 CB LYS F 119 115.109 206.078 164.960 1.00133.33 ATOM 159 N VAL F 120 112.881 203.855 165.146 1.00134.97 ATOM 160 CA VAL F 120 111.480 203.512 164.937 1.00134.97 ATOM 161 C VAL F 120 110.959 202.607 166.046 1.00134.97 ATOM 162 O VAL F 120 109.743 202.424 166.173 1.00134.97 ATOM 163 CB VAL F 120 111.292 202.861 163.551 1.00134.97 ATOM 164 CG1 VAL F 120 111.921 201.478 163.513 1.00134.97 ATOM 165 CG2 VAL F 120 109.820 202.819 163.150 1.00134.97 ATOM 166 N SER F 121 111.853 202.038 166.861 1.00136.91 ATOM 167 CA SER F 121 111.416 201.203 167.977 1.00136.91 ATOM 168 C SER F 121 110.468 201.952 168.905 1.00136.91 ATOM 169 O SER F 121 109.573 201.351 169.509 1.00136.91 ATOM 170 CB SER F 121 112.631 200.695 168.755 1.00136.91 ATOM 171 OG SER F 121 112.234 199.907 169.863 1.00136.91 ATOM 172 N GLY F 122 110.645 203.264 169.028 1.00138.99 ATOM 173 CA GLY F 122 109.801 204.078 169.875 1.00138.99 ATOM 174 C GLY F 122 108.533 204.596 169.239 1.00138.99 ATOM 175 O GLY F 122 107.828 205.395 169.861 1.00138.99 ATOM 176 N VAL F 123 108.222 204.174 168.010 1.00141.19 ATOM 177 CA VAL F 123 107.012 204.650 167.343 1.00141.19 ATOM 178 C VAL F 123 105.769 204.217 168.111 1.00141.19 ATOM 179 O VAL F 123 104.846 205.011 168.329 1.00141.19 ATOM 180 CB VAL F 123 106.976 204.157 165.884 1.00141.19 ATOM 181 N CYS F 124 105.726 202.955 168.532 1.00142.93 ATOM 182 CA CYS F 124 104.606 202.449 169.313 1.00142.93 ATOM 183 C CYS F 124 105.071 201.237 170.106 1.00142.93 ATOM 184 O CYS F 124 106.127 200.660 169.832 1.00142.93 ATOM 185 CB CYS F 124 103.410 202.093 168.425 1.00142.93 ATOM 186 SG CYS F 124 101.955 201.512 169.328 1.00142.93 ATOM 187 N LYS F 125 104.262 200.862 171.100 1.00143.59 ATOM 188 CA LYS F 125 104.639 199.775 171.999 1.00143.59 ATOM 189 C LYS F 125 104.764 198.451 171.257 1.00143.59 ATOM 190 O LYS F 125 105.690 197.672 171.516 1.00143.59 ATOM 191 CB LYS F 125 103.622 199.659 173.134 1.00143.59 ATOM 192 N ARG F 126 103.839 198.173 170.335 1.00144.99 ATOM 193 CA ARG F 126 103.869 196.903 169.616 1.00144.99 ATOM 194 C ARG F 126 105.100 196.798 168.724 1.00144.99 ATOM 195 O ARG F 126 105.565 195.692 168.422 1.00144.99 ATOM 196 CB ARG F 126 102.593 196.738 168.791 1.00144.99 ATOM 197 N TRP F 127 105.641 197.938 168.292 1.00140.80 ATOM 198 CA TRP F 127 106.795 197.921 167.399 1.00140.80 ATOM 199 C TRP F 127 108.058 197.467 168.119 1.00140.80 ATOM 200 O TRP F 127 109.008 197.009 167.475 1.00140.80 ATOM 201 CB TRP F 127 106.998 199.306 166.781 1.00140.80 ATOM 202 CG TRP F 127 105.848 199.772 165.926 1.00140.80 ATOM 203 CD1 TRP F 127 104.528 199.802 166.269 1.00140.80 ATOM 204 CD2 TRP F 127 105.926 200.300 164.596 1.00140.80 ATOM 205 NE1 TRP F 127 103.778 200.299 165.232 1.00140.80 ATOM 206 CE2 TRP F 127 104.614 200.615 164.194 1.00140.80 ATOM 207 CE3 TRP F 127 106.977 200.533 163.707 1.00140.80 ATOM 208 CZ2 TRP F 127 104.325 201.148 162.940 1.00140.80 ATOM 209 CZ3 TRP F 127 106.689 201.060 162.463 1.00140.80 ATOM 210 CH2 TRP F 127 105.374 201.363 162.091 1.00140.80 ATOM 211 N TYR F 128 108.091 197.589 169.448 1.00147.87 ATOM 212 CA TYR F 128 109.279 197.201 170.203 1.00147.87 ATOM 213 C TYR F 128 109.531 195.702 170.105 1.00147.87 ATOM 214 O TYR F 128 110.674 195.263 169.933 1.00147.87 ATOM 215 CB TYR F 128 109.133 197.630 171.663 1.00147.87 ATOM 216 N ARG F 129 108.472 194.897 170.221 1.00153.75 ATOM 217 CA ARG F 129 108.634 193.447 170.190 1.00153.75 ATOM 218 C ARG F 129 109.176 192.982 168.844 1.00153.75 ATOM 219 O ARG F 129 110.061 192.121 168.781 1.00153.75 ATOM 220 CB ARG F 129 107.301 192.765 170.502 1.00153.75 ATOM 221 N LEU F 130 108.650 193.542 167.753 1.00156.45 ATOM 222 CA LEU F 130 109.135 193.175 166.426 1.00156.45 ATOM 223 C LEU F 130 110.581 193.612 166.227 1.00156.45 ATOM 224 O LEU F 130 111.366 192.910 165.580 1.00156.45 ATOM 225 CB LEU F 130 108.236 193.785 165.352 1.00156.45 ATOM 226 N ALA F 131 110.947 194.778 166.766 1.00157.15 ATOM 227 CA ALA F 131 112.332 195.226 166.684 1.00157.15 ATOM 228 C ALA F 131 113.259 194.279 167.434 1.00157.15 ATOM 229 O ALA F 131 114.379 194.007 166.985 1.00157.15 ATOM 230 CB ALA F 131 112.457 196.648 167.229 1.00157.15 ATOM 231 N SER F 132 112.810 193.768 168.575 1.00162.88 ATOM 232 CA SER F 132 113.596 192.853 169.389 1.00162.88 ATOM 233 C SER F 132 113.433 191.397 168.973 1.00162.88 ATOM 234 O SER F 132 113.888 190.508 169.699 1.00162.88 ATOM 235 CB SER F 132 113.220 193.011 170.865 1.00162.88 ATOM 236 OG SER F 132 111.875 192.627 171.090 1.00162.88 ATOM 237 N ASP F 133 112.791 191.133 167.836 1.00174.05 ATOM 238 CA ASP F 133 112.616 189.762 167.375 1.00174.05 ATOM 239 C ASP F 133 113.964 189.121 167.071 1.00174.05 ATOM 240 O ASP F 133 114.874 189.765 166.543 1.00174.05 ATOM 241 CB ASP F 133 111.725 189.730 166.133 1.00174.05 ATOM 242 N GLU F 134 114.084 187.835 167.406 1.00186.98 ATOM 243 CA GLU F 134 115.353 187.134 167.247 1.00186.98 ATOM 244 C GLU F 134 115.743 186.951 165.787 1.00186.98 ATOM 245 O GLU F 134 116.888 186.581 165.507 1.00186.98 ATOM 246 CB GLU F 134 115.287 185.772 167.939 1.00186.98 ATOM 247 N SER F 135 114.820 187.188 164.852 1.00188.22 ATOM 248 CA SER F 135 115.142 187.019 163.439 1.00188.22 ATOM 249 C SER F 135 116.208 188.011 162.989 1.00188.22 ATOM 250 O SER F 135 117.143 187.644 162.267 1.00188.22 ATOM 251 CB SER F 135 113.878 187.169 162.592 1.00188.22 TER