HEADER METAL BINDING PROTEIN 31-DEC-69 8FNS TITLE X-ray crystal structure of Methylorubrum extorquens AM1 lanmodulin TITLE 2 (LanM) with neodymium (III) bound at pH 7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: EF-hand domain-containing protein; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; EXPDTA X-RAY DIFFRACTION REMARK 2 RESOLUTION. 1.01 ANGSTORMS DBREF 8FNS A 29 133 UNP C5B164 C5B164_METE 29 133 SEQRES 1 A 30 PHE LYS ALA ALA ASN PRO ASP ASN ASP GLY THR ILE ASP SEQRES 2 A 30 ALA ARG GLU LEU ALA SER PRO ALA GLY SER ALA LEU VAL SEQRES 3 A 30 ASN LEU ILE ARG ATOM 1 N PHE A 104 17.387 21.286 59.202 1.00 15.59 ATOM 2 CA PHE A 104 17.229 20.188 60.153 1.00 15.56 ATOM 3 C PHE A 104 16.779 20.721 61.505 1.00 16.67 ATOM 4 O PHE A 104 15.795 20.240 62.087 1.00 16.72 ATOM 5 CB PHE A 104 18.570 19.440 60.266 1.00 15.18 ATOM 6 CG PHE A 104 18.549 18.245 61.189 1.00 15.47 ATOM 7 CD1 PHE A 104 18.711 18.401 62.557 1.00 16.00 ATOM 8 CD2 PHE A 104 18.410 16.958 60.687 1.00 14.68 ATOM 9 CE1 PHE A 104 18.708 17.300 63.394 1.00 16.18 ATOM 10 CE2 PHE A 104 18.415 15.857 61.530 1.00 14.65 ATOM 11 CZ PHE A 104 18.553 16.025 62.871 1.00 16.81 ATOM 12 N LYS A 105 17.466 21.750 62.003 1.00 15.82 ATOM 13 CA LYS A 105 17.095 22.341 63.287 0.50 16.82 ATOM 14 C LYS A 105 15.688 22.921 63.241 1.00 17.12 ATOM 15 O LYS A 105 14.901 22.747 64.180 1.00 17.51 ATOM 16 CB LYS A 105 18.097 23.424 63.674 0.50 17.69 ATOM 17 CG LYS A 105 17.739 24.165 64.954 0.50 19.00 ATOM 18 CD LYS A 105 18.743 25.262 65.232 0.50 19.75 ATOM 19 CE LYS A 105 18.368 26.080 66.449 0.50 21.08 ATOM 20 NZ LYS A 105 19.301 27.224 66.591 0.50 22.27 ATOM 21 N ALA A 106 15.350 23.613 62.147 1.00 16.88 ATOM 22 CA ALA A 106 14.013 24.184 62.009 1.00 16.99 ATOM 23 C ALA A 106 12.932 23.114 62.009 1.00 16.58 ATOM 24 O ALA A 106 11.826 23.354 62.509 1.00 17.33 ATOM 25 CB ALA A 106 13.938 25.018 60.736 1.00 16.87 ATOM 26 N ALA A 107 13.229 21.938 61.463 1.00 16.31 ATOM 27 CA ALA A 107 12.271 20.841 61.430 1.00 16.22 ATOM 28 C ALA A 107 12.266 20.011 62.705 1.00 16.44 ATOM 29 O ALA A 107 11.419 19.119 62.849 1.00 16.60 ATOM 30 CB ALA A 107 12.549 19.949 60.225 1.00 15.38 ATOM 31 N ASN A 108 13.172 20.300 63.638 1.00 16.50 ATOM 32 CA ASN A 108 13.334 19.513 64.859 1.00 16.88 ATOM 33 C ASN A 108 13.247 20.404 66.093 1.00 17.51 ATOM 34 O ASN A 108 14.210 20.521 66.859 1.00 17.73 ATOM 35 CB ASN A 108 14.667 18.773 64.840 1.00 16.70 ATOM 36 CG ASN A 108 14.704 17.645 65.839 1.00 16.74 ATOM 37 OD1 ASN A 108 13.698 16.970 66.037 1.00 16.80 ATOM 38 ND2 ASN A 108 15.852 17.432 66.479 1.00 16.69 ATOM 39 N PRO A 109 12.087 21.019 66.343 1.00 19.87 ATOM 40 CA PRO A 109 11.995 21.984 67.453 1.00 20.55 ATOM 41 C PRO A 109 12.125 21.375 68.840 1.00 20.93 ATOM 42 O PRO A 109 12.347 22.127 69.799 1.00 21.46 ATOM 43 CB PRO A 109 10.621 22.635 67.244 1.00 20.88 ATOM 44 CG PRO A 109 9.830 21.607 66.499 1.00 20.49 ATOM 45 CD PRO A 109 10.826 20.940 65.581 1.00 19.74 ATOM 46 N ASP A 110 11.992 20.055 68.985 1.00 21.23 ATOM 47 CA ASP A 110 12.234 19.429 70.280 1.00 21.53 ATOM 48 C ASP A 110 13.717 19.314 70.618 1.00 21.38 ATOM 49 O ASP A 110 14.053 18.900 71.736 1.00 21.65 ATOM 50 CB ASP A 110 11.513 18.075 70.390 1.00 21.41 ATOM 51 CG ASP A 110 11.996 17.039 69.360 1.00 20.76 ATOM 52 OD1 ASP A 110 13.063 17.215 68.754 1.00 20.38 ATOM 53 OD2 ASP A 110 11.298 16.024 69.163 1.00 20.67 ATOM 54 N ASN A 111 14.602 19.663 69.681 1.00 23.67 ATOM 55 CA ASN A 111 16.034 19.787 69.961 1.00 23.64 ATOM 56 C ASN A 111 16.623 18.490 70.519 1.00 23.43 ATOM 57 O ASN A 111 17.482 18.504 71.405 1.00 23.70 ATOM 58 CB ASN A 111 16.306 20.977 70.887 1.00 24.29 ATOM 59 CG ASN A 111 17.775 21.302 71.009 1.00 24.32 ATOM 60 OD1 ASN A 111 18.534 21.187 70.048 1.00 23.86 ATOM 61 ND2 ASN A 111 18.189 21.703 72.205 1.00 24.91 ATOM 62 N ASP A 112 16.153 17.356 70.001 1.00 19.46 ATOM 63 CA ASP A 112 16.561 16.047 70.495 1.00 19.30 ATOM 64 C ASP A 112 17.541 15.338 69.570 1.00 18.69 ATOM 65 O ASP A 112 17.768 14.135 69.734 1.00 18.52 ATOM 66 CB ASP A 112 15.341 15.159 70.775 1.00 19.41 ATOM 67 CG ASP A 112 14.565 14.814 69.509 1.00 19.08 ATOM 68 OD1 ASP A 112 15.024 15.151 68.399 1.00 18.67 ATOM 69 OD2 ASP A 112 13.475 14.222 69.613 1.00 19.25 ATOM 70 N GLY A 113 18.106 16.040 68.595 1.00 17.69 ATOM 71 CA GLY A 113 19.116 15.460 67.743 1.00 17.20 ATOM 72 C GLY A 113 18.617 14.565 66.628 1.00 16.67 ATOM 73 O GLY A 113 19.430 14.156 65.786 1.00 16.16 ATOM 74 N THR A 114 17.319 14.237 66.571 1.00 17.40 ATOM 75 CA THR A 114 16.829 13.346 65.523 1.00 17.22 ATOM 76 C THR A 114 15.483 13.819 64.986 1.00 17.07 ATOM 77 O THR A 114 14.675 14.414 65.710 1.00 17.81 ATOM 78 CB THR A 114 16.705 11.873 65.975 1.00 17.26 ATOM 79 OG1 THR A 114 15.710 11.759 66.992 1.00 18.51 ATOM 80 CG2 THR A 114 18.015 11.319 66.510 1.00 17.27 ATOM 81 N ILE A 115 15.258 13.527 63.705 1.00 16.24 ATOM 82 CA ILE A 115 13.996 13.785 63.024 1.00 16.52 ATOM 83 C ILE A 115 13.285 12.461 62.803 1.00 16.63 ATOM 84 O ILE A 115 13.852 11.527 62.218 1.00 16.13 ATOM 85 CB ILE A 115 14.238 14.546 61.717 1.00 16.13 ATOM 86 CG1 ILE A 115 14.536 15.994 62.088 1.00 16.56 ATOM 87 CG2 ILE A 115 13.064 14.426 60.778 1.00 16.12 ATOM 88 CD1 ILE A 115 14.872 16.864 60.958 1.00 15.92 ATOM 89 N ASP A 116 12.055 12.375 63.308 1.00 17.53 ATOM 90 CA ASP A 116 11.214 11.202 63.161 1.00 17.61 ATOM 91 C ASP A 116 10.218 11.416 62.018 1.00 17.66 ATOM 92 O ASP A 116 10.201 12.455 61.347 1.00 17.30 ATOM 93 CB ASP A 116 10.546 10.819 64.497 1.00 18.70 ATOM 94 CG ASP A 116 9.591 11.900 65.054 1.00 18.82 ATOM 95 OD1 ASP A 116 9.068 12.735 64.286 1.00 18.85 ATOM 96 OD2 ASP A 116 9.373 11.909 66.292 1.00 19.59 ATOM 97 N ALA A 117 9.369 10.414 61.798 1.00 19.93 ATOM 98 CA ALA A 117 8.451 10.473 60.665 1.00 19.03 ATOM 99 C ALA A 117 7.480 11.649 60.772 1.00 19.20 ATOM 100 O ALA A 117 7.139 12.270 59.754 1.00 18.40 ATOM 101 CB ALA A 117 7.707 9.150 60.535 1.00 20.19 ATOM 102 N ARG A 118 7.004 11.956 61.989 1.00 21.87 ATOM 103 CA ARG A 118 6.107 13.097 62.181 1.00 22.07 ATOM 104 C ARG A 118 6.796 14.397 61.798 1.00 21.01 ATOM 105 O ARG A 118 6.218 15.254 61.123 1.00 20.25 ATOM 106 CB ARG A 118 5.661 13.196 63.641 1.00 23.93 ATOM 107 CG ARG A 118 4.663 12.175 64.139 1.00 25.72 ATOM 108 CD ARG A 118 4.341 12.462 65.622 1.00 27.23 ATOM 109 NE ARG A 118 5.557 12.663 66.408 1.00 28.24 ATOM 110 CZ ARG A 118 6.042 13.845 66.781 1.00 28.19 ATOM 111 NH1 ARG A 118 5.389 14.972 66.537 1.00 29.01 ATOM 112 NH2 ARG A 118 7.225 13.898 67.391 1.00 28.35 ATOM 113 N GLU A 119 8.037 14.570 62.245 1.00 18.12 ATOM 114 CA GLU A 119 8.766 15.797 61.956 1.00 17.16 ATOM 115 C GLU A 119 9.111 15.907 60.475 1.00 15.61 ATOM 116 O GLU A 119 9.077 17.003 59.906 1.00 15.47 ATOM 117 CB GLU A 119 10.016 15.842 62.830 1.00 17.39 ATOM 118 CG GLU A 119 9.670 16.069 64.303 1.00 19.33 ATOM 119 CD GLU A 119 10.786 15.707 65.269 1.00 19.64 ATOM 120 OE1 GLU A 119 11.613 14.811 64.981 1.00 18.95 ATOM 121 OE2 GLU A 119 10.833 16.307 66.364 1.00 20.55 ATOM 122 N LEU A 120 9.451 14.787 59.835 1.00 17.22 ATOM 123 CA LEU A 120 9.769 14.843 58.415 1.00 16.56 ATOM 124 C LEU A 120 8.556 15.261 57.596 1.00 16.77 ATOM 125 O LEU A 120 8.711 15.937 56.572 1.00 16.71 ATOM 126 CB LEU A 120 10.324 13.499 57.947 1.00 16.83 ATOM 127 CG LEU A 120 11.057 13.543 56.610 1.00 16.86 ATOM 128 CD1 LEU A 120 12.359 14.342 56.742 1.00 16.21 ATOM 129 CD2 LEU A 120 11.355 12.155 56.072 1.00 16.91 ATOM 130 N ALA A 121 7.352 14.897 58.050 1.00 15.63 ATOM 131 CA ALA A 121 6.116 15.225 57.349 1.00 15.78 ATOM 132 C ALA A 121 5.684 16.674 57.542 1.00 15.53 ATOM 133 O ALA A 121 4.844 17.167 56.777 1.00 15.89 ATOM 134 CB ALA A 121 5.000 14.289 57.816 1.00 16.27 ATOM 135 N SER A 122 6.224 17.358 58.552 1.00 15.90 ATOM 136 CA SER A 122 5.821 18.722 58.842 1.00 15.87 ATOM 137 C SER A 122 6.231 19.664 57.708 1.00 15.25 ATOM 138 O SER A 122 7.074 19.324 56.880 1.00 14.97 ATOM 139 CB SER A 122 6.481 19.176 60.138 1.00 15.97 ATOM 140 OG SER A 122 7.871 19.439 59.956 1.00 15.39 ATOM 141 N PRO A 123 5.668 20.876 57.667 1.00 15.47 ATOM 142 CA PRO A 123 6.093 21.814 56.615 1.00 15.78 ATOM 143 C PRO A 123 7.598 22.065 56.611 1.00 15.57 ATOM 144 O PRO A 123 8.233 22.049 55.548 1.00 16.00 ATOM 145 CB PRO A 123 5.262 23.076 56.915 1.00 16.49 ATOM 146 CG PRO A 123 4.079 22.569 57.671 1.00 16.86 ATOM 147 CD PRO A 123 4.560 21.418 58.478 1.00 16.34 ATOM 148 N ALA A 124 8.201 22.264 57.783 1.00 15.57 ATOM 149 CA ALA A 124 9.651 22.444 57.834 1.00 15.63 ATOM 150 C ALA A 124 10.383 21.176 57.397 1.00 15.19 ATOM 151 O ALA A 124 11.439 21.252 56.750 1.00 15.42 ATOM 152 CB ALA A 124 10.072 22.855 59.238 1.00 15.37 ATOM 153 N GLY A 125 9.833 20.012 57.738 1.00 15.01 ATOM 154 CA GLY A 125 10.421 18.754 57.294 1.00 14.84 ATOM 155 C GLY A 125 10.444 18.627 55.786 1.00 15.50 ATOM 156 O GLY A 125 11.426 18.158 55.206 1.00 15.58 ATOM 157 N SER A 126 9.371 19.065 55.128 1.00 15.57 ATOM 158 CA SER A 126 9.318 19.010 53.670 1.00 16.11 ATOM 159 C SER A 126 10.422 19.850 53.046 1.00 16.93 ATOM 160 O SER A 126 10.980 19.471 52.008 1.00 17.51 ATOM 161 CB SER A 126 7.937 19.451 53.150 1.00 16.57 ATOM 162 OG SER A 126 7.772 20.868 53.115 1.00 17.59 ATOM 163 N ALA A 127 10.769 20.975 53.671 1.00 16.49 ATOM 164 CA ALA A 127 11.843 21.806 53.147 1.00 17.12 ATOM 165 C ALA A 127 13.203 21.148 53.354 1.00 16.75 ATOM 166 O ALA A 127 14.103 21.309 52.523 1.00 17.54 ATOM 167 CB ALA A 127 11.790 23.182 53.802 1.00 17.08 ATOM 168 N LEU A 128 13.374 20.399 54.443 1.00 16.81 ATOM 169 CA LEU A 128 14.588 19.604 54.598 1.00 16.28 ATOM 170 C LEU A 128 14.691 18.552 53.500 1.00 16.58 ATOM 171 O LEU A 128 15.747 18.391 52.875 1.00 16.87 ATOM 172 CB LEU A 128 14.620 18.952 55.978 1.00 15.46 ATOM 173 CG LEU A 128 15.788 17.997 56.203 1.00 15.01 ATOM 174 CD1 LEU A 128 17.121 18.728 56.181 1.00 15.40 ATOM 175 CD2 LEU A 128 15.593 17.246 57.504 1.00 14.16 ATOM 176 N VAL A 129 13.591 17.831 53.246 1.00 16.78 ATOM 177 CA VAL A 129 13.573 16.816 52.193 1.00 17.40 ATOM 178 C VAL A 129 13.971 17.423 50.853 1.00 18.99 ATOM 179 O VAL A 129 14.714 16.813 50.074 1.00 19.24 ATOM 180 CB VAL A 129 12.200 16.112 52.135 1.00 16.97 ATOM 181 CG1 VAL A 129 12.095 15.234 50.885 1.00 18.34 ATOM 182 CG2 VAL A 129 11.998 15.273 53.376 1.00 16.13 ATOM 183 N ASN A 130 13.505 18.637 50.565 1.00 19.62 ATOM 184 CA ASN A 130 13.852 19.241 49.285 1.00 20.95 ATOM 185 C ASN A 130 15.344 19.572 49.165 1.00 20.82 ATOM 186 O ASN A 130 15.848 19.676 48.039 1.00 22.16 ATOM 187 CB ASN A 130 12.920 20.419 48.987 1.00 21.31 ATOM 188 CG ASN A 130 11.568 19.963 48.427 1.00 21.75 ATOM 189 OD1 ASN A 130 11.504 19.039 47.604 1.00 22.38 ATOM 190 ND2 ASN A 130 10.487 20.603 48.868 1.00 21.62 ATOM 191 N LEU A 131 16.069 19.707 50.288 1.00 18.24 ATOM 192 CA LEU A 131 17.520 19.886 50.237 1.00 18.22 ATOM 193 C LEU A 131 18.265 18.564 50.114 1.00 17.96 ATOM 194 O LEU A 131 19.322 18.515 49.475 1.00 18.77 ATOM 195 CB LEU A 131 18.027 20.606 51.489 1.00 16.97 ATOM 196 CG LEU A 131 17.558 22.047 51.694 1.00 17.64 ATOM 197 CD1 LEU A 131 18.000 22.549 53.044 1.00 16.73 ATOM 198 CD2 LEU A 131 18.104 22.942 50.604 1.00 19.01 ATOM 199 N ILE A 132 17.748 17.486 50.701 1.00 19.72 ATOM 200 CA ILE A 132 18.531 16.260 50.846 1.00 19.26 ATOM 201 C ILE A 132 18.085 15.116 49.942 1.00 19.88 ATOM 202 O ILE A 132 18.786 14.090 49.886 1.00 20.27 ATOM 203 CB ILE A 132 18.647 15.801 52.317 1.00 18.04 ATOM 204 CG1 ILE A 132 17.299 15.301 52.849 1.00 17.40 ATOM 205 CG2 ILE A 132 19.216 16.927 53.182 1.00 17.75 ATOM 206 CD1 ILE A 132 17.381 14.714 54.251 1.00 16.62 ATOM 207 N ARG A 133 16.974 15.256 49.222 1.00 20.59 ATOM 208 CA ARG A 133 16.485 14.174 48.370 1.00 21.38 ATOM 209 C ARG A 133 17.324 14.021 47.115 1.00 23.13 ATOM 210 O ARG A 133 18.062 14.921 46.708 1.00 23.69 ATOM 211 CB ARG A 133 15.014 14.368 48.002 1.00 22.03 ATOM 212 CG ARG A 133 14.737 15.557 47.099 1.00 23.43 ATOM 213 CD ARG A 133 13.258 15.609 46.725 1.00 23.43 ATOM 214 NE ARG A 133 12.882 16.848 46.050 1.00 24.30 ATOM 215 CZ ARG A 133 13.032 17.065 44.752 1.00 26.51 ATOM 216 NH1 ARG A 133 13.584 16.159 43.962 1.00 28.39 ATOM 217 NH2 ARG A 133 12.621 18.221 44.234 1.00 28.04 ATOM 218 OXT ARG A 133 17.281 12.968 46.475 1.00 29.72 ATOM 219 ND ND A 204 12.797 15.041 67.239 1.00 17.49 TER