HEADER RIBOSOME 31-DEC-69 8G5Z TITLE mRNA decoding in human is kinetically and structurally distinct from TITLE 2 bacteria (GA state) COMPND MOL_ID: 80; COMPND 2 MOLECULE: 60S ribosomal protein L41; COMPND 3 CHAIN: Ln; EXPDTA ELECTRON MICROSCOPY DBREF 8G5Z L 1 25 UNP P62945 RL41_HUMAN 1 25 MODRES 8G5Z OMU 14 U modified residue MODRES 8G5Z PSU 55 U modified residue MODRES 8G5Z PSU 69 U modified residue MODRES 8G5Z OMG 75 G modified residue SEQRES 1 Ln 25 MET ARG ALA LYS TRP ARG LYS LYS ARG MET ARG ARG LEU SEQRES 2 Ln 25 LYS ARG LYS ARG ARG LYS MET ARG GLN ARG SER LYS ATOM 1 N MET L 1 256.187 240.756 213.486 1.00 48.52 ATOM 2 CA MET L 1 255.476 241.706 214.328 1.00 48.52 ATOM 3 C MET L 1 254.736 242.713 213.459 1.00 48.52 ATOM 4 O MET L 1 255.264 243.165 212.450 1.00 48.52 ATOM 5 CB MET L 1 256.449 242.413 215.266 1.00 48.52 ATOM 6 CG MET L 1 255.797 243.360 216.239 1.00 48.52 ATOM 7 SD MET L 1 256.984 244.089 217.373 1.00 48.52 ATOM 8 CE MET L 1 255.913 245.193 218.277 1.00 48.52 ATOM 9 N ARG L 2 253.506 243.048 213.843 1.00 44.90 ATOM 10 CA ARG L 2 252.709 244.011 213.096 1.00 44.90 ATOM 11 C ARG L 2 253.452 245.333 212.982 1.00 44.90 ATOM 12 O ARG L 2 254.064 245.788 213.950 1.00 44.90 ATOM 13 CB ARG L 2 251.352 244.217 213.766 1.00 44.90 ATOM 14 CG ARG L 2 250.349 244.995 212.942 1.00 44.90 ATOM 15 CD ARG L 2 248.985 244.984 213.600 1.00 44.90 ATOM 16 NE ARG L 2 248.116 246.044 213.108 1.00 44.90 ATOM 17 CZ ARG L 2 246.867 246.229 213.508 1.00 44.90 ATOM 18 NH1 ARG L 2 246.308 245.443 214.410 1.00 44.90 ATOM 19 NH2 ARG L 2 246.162 247.228 212.993 1.00 44.90 ATOM 20 N ALA L 3 253.418 245.949 211.800 1.00 44.87 ATOM 21 CA ALA L 3 254.178 247.177 211.587 1.00 44.87 ATOM 22 C ALA L 3 253.684 248.299 212.486 1.00 44.87 ATOM 23 O ALA L 3 254.485 249.086 213.000 1.00 44.87 ATOM 24 CB ALA L 3 254.105 247.594 210.121 1.00 44.87 ATOM 25 N LYS L 4 252.371 248.390 212.689 1.00 45.24 ATOM 26 CA LYS L 4 251.831 249.429 213.555 1.00 45.24 ATOM 27 C LYS L 4 252.358 249.292 214.976 1.00 45.24 ATOM 28 O LYS L 4 252.683 250.293 215.622 1.00 45.24 ATOM 29 CB LYS L 4 250.309 249.376 213.548 1.00 45.24 ATOM 30 CG LYS L 4 249.669 250.423 214.404 1.00 45.24 ATOM 31 CD LYS L 4 248.219 250.109 214.664 1.00 45.24 ATOM 32 CE LYS L 4 247.330 250.912 213.763 1.00 45.24 ATOM 33 NZ LYS L 4 245.926 250.817 214.204 1.00 45.24 ATOM 34 N TRP L 5 252.443 248.063 215.485 1.00 46.18 ATOM 35 CA TRP L 5 252.975 247.875 216.827 1.00 46.18 ATOM 36 C TRP L 5 254.490 247.975 216.866 1.00 46.18 ATOM 37 O TRP L 5 255.048 248.347 217.902 1.00 46.18 ATOM 38 CB TRP L 5 252.514 246.541 217.410 1.00 46.18 ATOM 39 CG TRP L 5 251.048 246.270 217.265 1.00 46.18 ATOM 40 CD1 TRP L 5 250.474 245.104 216.878 1.00 46.18 ATOM 41 CD2 TRP L 5 249.970 247.187 217.499 1.00 46.18 ATOM 42 NE1 TRP L 5 249.112 245.226 216.865 1.00 46.18 ATOM 43 CE2 TRP L 5 248.777 246.498 217.240 1.00 46.18 ATOM 44 CE3 TRP L 5 249.900 248.519 217.909 1.00 46.18 ATOM 45 CZ2 TRP L 5 247.532 247.093 217.366 1.00 46.18 ATOM 46 CZ3 TRP L 5 248.665 249.107 218.035 1.00 46.18 ATOM 47 CH2 TRP L 5 247.496 248.396 217.763 1.00 46.18 ATOM 48 N ARG L 6 255.174 247.651 215.770 1.00 45.98 ATOM 49 CA ARG L 6 256.602 247.931 215.713 1.00 45.98 ATOM 50 C ARG L 6 256.853 249.428 215.783 1.00 45.98 ATOM 51 O ARG L 6 257.834 249.874 216.386 1.00 45.98 ATOM 52 CB ARG L 6 257.216 247.340 214.448 1.00 45.98 ATOM 53 CG ARG L 6 258.690 247.021 214.597 1.00 45.98 ATOM 54 CD ARG L 6 259.366 246.735 213.270 1.00 45.98 ATOM 55 NE ARG L 6 258.818 245.567 212.592 1.00 45.98 ATOM 56 CZ ARG L 6 257.979 245.619 211.567 1.00 45.98 ATOM 57 NH1 ARG L 6 257.564 246.773 211.073 1.00 45.98 ATOM 58 NH2 ARG L 6 257.554 244.484 211.018 1.00 45.98 ATOM 59 N LYS L 7 255.975 250.218 215.168 1.00 47.27 ATOM 60 CA LYS L 7 256.059 251.666 215.291 1.00 47.27 ATOM 61 C LYS L 7 255.785 252.118 216.719 1.00 47.27 ATOM 62 O LYS L 7 256.483 252.994 217.239 1.00 47.27 ATOM 63 CB LYS L 7 255.080 252.325 214.324 1.00 47.27 ATOM 64 CG LYS L 7 255.207 253.826 214.244 1.00 47.27 ATOM 65 CD LYS L 7 254.020 254.437 213.534 1.00 47.27 ATOM 66 CE LYS L 7 254.452 255.197 212.299 1.00 47.27 ATOM 67 NZ LYS L 7 253.457 256.228 211.918 1.00 47.27 ATOM 68 N LYS L 8 254.770 251.541 217.366 1.00 48.69 ATOM 69 CA LYS L 8 254.469 251.905 218.747 1.00 48.69 ATOM 70 C LYS L 8 255.610 251.512 219.674 1.00 48.69 ATOM 71 O LYS L 8 255.934 252.235 220.620 1.00 48.69 ATOM 72 CB LYS L 8 253.163 251.252 219.197 1.00 48.69 ATOM 73 CG LYS L 8 252.785 251.569 220.631 1.00 48.69 ATOM 74 CD LYS L 8 251.530 250.840 221.055 1.00 48.69 ATOM 75 CE LYS L 8 250.288 251.562 220.604 1.00 48.69 ATOM 76 NZ LYS L 8 250.070 252.787 221.402 1.00 48.69 ATOM 77 N ARG L 9 256.226 250.361 219.418 1.00 50.27 ATOM 78 CA ARG L 9 257.384 249.946 220.199 1.00 50.27 ATOM 79 C ARG L 9 258.505 250.967 220.104 1.00 50.27 ATOM 80 O ARG L 9 259.144 251.304 221.104 1.00 50.27 ATOM 81 CB ARG L 9 257.877 248.586 219.718 1.00 50.27 ATOM 82 CG ARG L 9 258.962 247.996 220.574 1.00 50.27 ATOM 83 CD ARG L 9 259.410 246.670 220.024 1.00 50.27 ATOM 84 NE ARG L 9 258.617 245.569 220.548 1.00 50.27 ATOM 85 CZ ARG L 9 258.992 244.300 220.503 1.00 50.27 ATOM 86 NH1 ARG L 9 260.142 243.941 219.959 1.00 50.27 ATOM 87 NH2 ARG L 9 258.195 243.369 221.016 1.00 50.27 ATOM 88 N MET L 10 258.768 251.463 218.897 1.00 51.31 ATOM 89 CA MET L 10 259.875 252.392 218.721 1.00 51.31 ATOM 90 C MET L 10 259.544 253.761 219.298 1.00 51.31 ATOM 91 O MET L 10 260.426 254.448 219.822 1.00 51.31 ATOM 92 CB MET L 10 260.241 252.495 217.245 1.00 51.31 ATOM 93 CG MET L 10 261.324 253.501 216.975 1.00 51.31 ATOM 94 SD MET L 10 262.944 252.764 217.236 1.00 51.31 ATOM 95 CE MET L 10 262.727 251.196 216.405 1.00 51.31 ATOM 96 N ARG L 11 258.280 254.177 219.213 1.00 51.02 ATOM 97 CA ARG L 11 257.886 255.448 219.809 1.00 51.02 ATOM 98 C ARG L 11 258.099 255.438 221.315 1.00 51.02 ATOM 99 O ARG L 11 258.589 256.418 221.886 1.00 51.02 ATOM 100 CB ARG L 11 256.427 255.753 219.487 1.00 51.02 ATOM 101 CG ARG L 11 256.175 256.070 218.038 1.00 51.02 ATOM 102 CD ARG L 11 255.072 257.083 217.900 1.00 51.02 ATOM 103 NE ARG L 11 255.158 257.803 216.639 1.00 51.02 ATOM 104 CZ ARG L 11 254.217 257.791 215.708 1.00 51.02 ATOM 105 NH1 ARG L 11 253.103 257.097 215.863 1.00 51.02 ATOM 106 NH2 ARG L 11 254.397 258.496 214.595 1.00 51.02 ATOM 107 N ARG L 12 257.725 254.344 221.977 1.00 52.84 ATOM 108 CA ARG L 12 257.976 254.224 223.407 1.00 52.84 ATOM 109 C ARG L 12 259.469 254.207 223.693 1.00 52.84 ATOM 110 O ARG L 12 259.933 254.796 224.674 1.00 52.84 ATOM 111 CB ARG L 12 257.313 252.962 223.950 1.00 52.84 ATOM 112 CG ARG L 12 255.804 252.979 223.872 1.00 52.84 ATOM 113 CD ARG L 12 255.206 251.970 224.825 1.00 52.84 ATOM 114 NE ARG L 12 255.339 250.609 224.323 1.00 52.84 ATOM 115 CZ ARG L 12 254.321 249.790 224.108 1.00 52.84 ATOM 116 NH1 ARG L 12 253.075 250.160 224.347 1.00 52.84 ATOM 117 NH2 ARG L 12 254.561 248.569 223.642 1.00 52.84 ATOM 118 N LEU L 13 260.237 253.529 222.844 1.00 54.07 ATOM 119 CA LEU L 13 261.682 253.501 223.011 1.00 54.07 ATOM 120 C LEU L 13 262.282 254.890 222.860 1.00 54.07 ATOM 121 O LEU L 13 263.220 255.248 223.579 1.00 54.07 ATOM 122 CB LEU L 13 262.300 252.538 222.003 1.00 54.07 ATOM 123 CG LEU L 13 263.793 252.271 222.133 1.00 54.07 ATOM 124 CD1 LEU L 13 264.163 252.025 223.578 1.00 54.07 ATOM 125 CD2 LEU L 13 264.188 251.096 221.268 1.00 54.07 ATOM 126 N LYS L 14 261.764 255.685 221.924 1.00 54.14 ATOM 127 CA LYS L 14 262.291 257.031 221.732 1.00 54.14 ATOM 128 C LYS L 14 262.002 257.922 222.932 1.00 54.14 ATOM 129 O LYS L 14 262.849 258.730 223.325 1.00 54.14 ATOM 130 CB LYS L 14 261.730 257.652 220.454 1.00 54.14 ATOM 131 CG LYS L 14 262.287 257.053 219.180 1.00 54.14 ATOM 132 CD LYS L 14 261.902 257.887 217.975 1.00 54.14 ATOM 133 CE LYS L 14 260.434 257.726 217.644 1.00 54.14 ATOM 134 NZ LYS L 14 260.055 258.481 216.420 1.00 54.14 ATOM 135 N ARG L 15 260.769 257.839 223.426 1.00 54.96 ATOM 136 CA ARG L 15 260.361 258.660 224.586 1.00 54.96 ATOM 137 C ARG L 15 261.293 258.354 225.759 1.00 54.96 ATOM 138 O ARG L 15 261.719 259.306 226.421 1.00 54.96 ATOM 139 CB ARG L 15 258.883 258.412 224.885 1.00 54.96 ATOM 140 CG ARG L 15 258.206 259.509 225.694 1.00 54.96 ATOM 141 CD ARG L 15 256.712 259.452 225.450 1.00 54.96 ATOM 142 NE ARG L 15 256.384 258.175 224.840 1.00 54.96 ATOM 143 CZ ARG L 15 255.171 257.808 224.452 1.00 54.96 ATOM 144 NH1 ARG L 15 254.990 256.621 223.899 1.00 54.96 ATOM 145 NH2 ARG L 15 254.149 258.631 224.605 1.00 54.96 ATOM 146 N LYS L 16 261.633 257.079 225.962 1.00 56.18 ATOM 147 CA LYS L 16 262.548 256.689 227.065 1.00 56.18 ATOM 148 C LYS L 16 263.905 257.331 226.808 1.00 56.18 ATOM 149 O LYS L 16 264.438 257.932 227.745 1.00 56.18 ATOM 150 CB LYS L 16 262.588 255.168 227.212 1.00 56.18 ATOM 151 CG LYS L 16 263.976 254.556 227.344 1.00 56.18 ATOM 152 CD LYS L 16 263.957 253.048 227.431 1.00 56.18 ATOM 153 CE LYS L 16 263.409 252.538 228.747 1.00 56.18 ATOM 154 NZ LYS L 16 263.486 251.060 228.833 1.00 56.18 ATOM 155 N ARG L 17 264.389 257.278 225.565 1.00 56.01 ATOM 156 CA ARG L 17 265.720 257.830 225.199 1.00 56.01 ATOM 157 C ARG L 17 265.764 259.344 225.435 1.00 56.01 ATOM 158 O ARG L 17 266.825 259.819 225.837 1.00 56.01 ATOM 159 CB ARG L 17 266.072 257.454 223.757 1.00 56.01 ATOM 160 CG ARG L 17 266.333 255.974 223.526 1.00 56.01 ATOM 161 CD ARG L 17 266.447 255.649 222.048 1.00 56.01 ATOM 162 NE ARG L 17 266.880 254.278 221.816 1.00 56.01 ATOM 163 CZ ARG L 17 266.969 253.703 220.625 1.00 56.01 ATOM 164 NH1 ARG L 17 266.659 254.385 219.537 1.00 56.01 ATOM 165 NH2 ARG L 17 267.376 252.450 220.524 1.00 56.01 ATOM 166 N ARG L 18 264.665 260.067 225.166 1.00 56.13 ATOM 167 CA ARG L 18 264.623 261.538 225.371 1.00 56.13 ATOM 168 C ARG L 18 264.605 261.838 226.865 1.00 56.13 ATOM 169 O ARG L 18 265.241 262.814 227.263 1.00 56.13 ATOM 170 CB ARG L 18 263.427 262.192 224.669 1.00 56.13 ATOM 171 CG ARG L 18 263.607 262.388 223.171 1.00 56.13 ATOM 172 CD ARG L 18 262.488 263.162 222.495 1.00 56.13 ATOM 173 NE ARG L 18 261.223 262.454 222.356 1.00 56.13 ATOM 174 CZ ARG L 18 260.212 262.533 223.213 1.00 56.13 ATOM 175 NH1 ARG L 18 260.312 263.289 224.292 1.00 56.13 ATOM 176 NH2 ARG L 18 259.105 261.850 222.994 1.00 56.13 ATOM 177 N LYS L 19 263.904 261.034 227.653 1.00 56.73 ATOM 178 CA LYS L 19 263.971 261.240 229.092 1.00 56.73 ATOM 179 C LYS L 19 265.376 261.007 229.622 1.00 56.73 ATOM 180 O LYS L 19 265.822 261.726 230.520 1.00 56.73 ATOM 181 CB LYS L 19 262.983 260.317 229.801 1.00 56.73 ATOM 182 CG LYS L 19 261.537 260.553 229.416 1.00 56.73 ATOM 183 CD LYS L 19 261.014 261.882 229.917 1.00 56.73 ATOM 184 CE LYS L 19 259.563 262.081 229.500 1.00 56.73 ATOM 185 NZ LYS L 19 258.637 261.136 230.184 1.00 56.73 ATOM 186 N MET L 20 266.087 260.019 229.077 1.00 57.35 ATOM 187 CA MET L 20 267.449 259.746 229.515 1.00 57.35 ATOM 188 C MET L 20 268.400 260.887 229.198 1.00 57.35 ATOM 189 O MET L 20 269.431 261.016 229.863 1.00 57.35 ATOM 190 CB MET L 20 267.968 258.463 228.871 1.00 57.35 ATOM 191 CG MET L 20 267.591 257.179 229.594 1.00 57.35 ATOM 192 SD MET L 20 268.575 256.833 231.066 1.00 57.35 ATOM 193 CE MET L 20 267.608 257.636 232.340 1.00 57.35 ATOM 194 N ARG L 21 268.172 261.654 228.134 1.00 58.13 ATOM 195 CA ARG L 21 269.031 262.823 227.805 1.00 58.13 ATOM 196 C ARG L 21 268.553 264.107 228.515 1.00 58.13 ATOM 197 O ARG L 21 269.439 264.883 228.885 1.00 58.13 ATOM 198 CB ARG L 21 269.173 262.962 226.287 1.00 58.13 ATOM 199 CG ARG L 21 269.555 261.681 225.561 1.00 58.13 ATOM 200 CD ARG L 21 269.772 261.957 224.087 1.00 58.13 ATOM 201 NE ARG L 21 270.941 262.795 223.862 1.00 58.13 ATOM 202 CZ ARG L 21 271.010 263.778 222.975 1.00 58.13 ATOM 203 NH1 ARG L 21 269.964 264.074 222.223 1.00 58.13 ATOM 204 NH2 ARG L 21 272.122 264.475 222.852 1.00 58.13 ATOM 205 N GLN L 22 267.270 264.252 228.786 1.00 58.83 ATOM 206 CA GLN L 22 266.758 265.456 229.486 1.00 58.83 ATOM 207 C GLN L 22 267.248 265.404 230.930 1.00 58.83 ATOM 208 O GLN L 22 267.251 266.452 231.598 1.00 58.83 ATOM 209 CB GLN L 22 265.235 265.479 229.423 1.00 58.83 ATOM 210 CG GLN L 22 264.692 265.896 228.065 1.00 58.83 ATOM 211 CD GLN L 22 265.212 267.229 227.581 1.00 58.83 ATOM 212 OE1 GLN L 22 265.673 268.066 228.352 1.00 58.83 ATOM 213 NE2 GLN L 22 265.133 267.439 226.278 1.00 58.83 ATOM 214 N ARG L 23 267.643 264.211 231.373 1.00 57.12 ATOM 215 CA ARG L 23 268.070 264.024 232.778 1.00 57.12 ATOM 216 C ARG L 23 269.559 264.336 232.863 1.00 57.12 ATOM 217 O ARG L 23 270.019 264.699 233.954 1.00 57.12 ATOM 218 CB ARG L 23 267.647 262.628 233.238 1.00 57.12 ATOM 219 CG ARG L 23 268.637 261.910 234.136 1.00 57.12 ATOM 220 CD ARG L 23 268.042 260.584 234.550 1.00 57.12 ATOM 221 NE ARG L 23 268.647 260.129 235.786 1.00 57.12 ATOM 222 CZ ARG L 23 268.097 260.254 236.982 1.00 57.12 ATOM 223 NH1 ARG L 23 266.904 260.808 237.113 1.00 57.12 ATOM 224 NH2 ARG L 23 268.741 259.811 238.042 1.00 57.12 ATOM 225 N SER L 24 270.254 264.316 231.726 1.00 59.62 ATOM 226 CA SER L 24 271.699 264.489 231.731 1.00 59.62 ATOM 227 C SER L 24 272.104 265.849 231.178 1.00 59.62 ATOM 228 O SER L 24 273.297 266.145 231.069 1.00 59.62 ATOM 229 CB SER L 24 272.367 263.376 230.925 1.00 59.62 ATOM 230 OG SER L 24 273.743 263.287 231.238 1.00 59.62 ATOM 231 N LYS L 25 271.129 266.681 230.829 1.00 62.52 ATOM 232 CA LYS L 25 271.423 268.019 230.327 1.00 62.52 ATOM 233 C LYS L 25 270.822 269.079 231.241 1.00 62.52 ATOM 234 O LYS L 25 271.278 270.221 231.265 1.00 62.52 ATOM 235 CB LYS L 25 270.897 268.197 228.902 1.00 62.52 ATOM 236 CG LYS L 25 269.387 268.288 228.802 1.00 62.52 ATOM 237 CD LYS L 25 268.929 268.299 227.351 1.00 62.52 ATOM 238 CE LYS L 25 269.258 269.611 226.655 1.00 62.52 ATOM 239 NZ LYS L 25 268.411 270.730 227.143 1.00 62.52 TER