002986947 Q87KL8_nD1 5050.1.1 1-194 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002986948 Q87TM7_nD1 107.1.1 51-135 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002986949 Q87M48_nD4 5037.1.1 281-310 'Bacterial photosystem II reaction centre L and M subunits-like' 'Bacterial photosystem II reaction centre L and M subunits-like' 'Bacterial photosystem II reaction centre L and M subunits-like' 'alpha bundles' 002986950 Q87M48_nD3 5060.2.1 86-95,126-280 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002986951 Q87M48_nD1 5037.1.1 16-40 'Bacterial photosystem II reaction centre L and M subunits-like' 'Bacterial photosystem II reaction centre L and M subunits-like' 'Bacterial photosystem II reaction centre L and M subunits-like' 'alpha bundles' 002986952 Q87M48_nD2 5037.1.1 101-125 'Bacterial photosystem II reaction centre L and M subunits-like' 'Bacterial photosystem II reaction centre L and M subunits-like' 'Bacterial photosystem II reaction centre L and M subunits-like' 'alpha bundles' 002986953 Q87SU6_nD1 4.1.1 1-60 'SH3' 'SH3' 'SH3' 'beta barrels' 002986954 Q87SV3_nD1 2005.1.1 1-145 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002986955 Q87L13_nD1 2005.1.1 1-338 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002986956 Q87HJ6_nD3 10.12.1 326-410 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002986957 Q87HJ6_nD1 10.12.1 6-160,256-325 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002986958 Q87HJ6_nD2 3691.1.1 161-255 'Phosphomannose isomerase helical insertion domain' 'Phosphomannose isomerase helical insertion domain' 'Phosphomannose isomerase helical insertion domain' 'alpha arrays' 002986959 Q87HC4_nD3 10.47.1 311-440 'TssK C-terminal domain' 'TssK C-terminal domain' 'jelly-roll' 'beta sandwiches' 002986960 Q87HC4_nD1 4166.1.1 6-185 'Lactophage receptor-binding protein N-terminal domain-like' 'Lactophage receptor-binding protein N-terminal domain-like' 'Lactophage receptor-binding protein N-terminal domain-like' 'beta sandwiches' 002986961 Q87HC4_nD2 602.3.1 186-310 'TssK neck domain' 'TssK neck domain' 'L-aspartase middle domain-like' 'alpha arrays' 002986962 Q87G25_nD4 UNASSIGNED 266-540 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002986963 Q87G25_nD3 4168.1.1 1-10,211-265 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002986964 Q87G25_nD1 5043.2.1 11-50,176-210 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002986965 Q87G25_nD2 601.4.1 51-175 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002986966 Q87NC3_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002986967 Q87NC3_nD2 101.1.3 136-210 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002986968 Q87RT5_nD2 7523.1.1 86-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002986969 Q87RT5_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002986970 Q87I74_nD1 192.15.1 31-165 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002986971 Q87T11_nD1 304.109.1 1-95 'Ribosomal proteins S24e, L23 and L15e' 'Ribosomal proteins S24e, L23 and L15e' 'Alpha-beta plaits' 'a+b two layers' 002986972 Q87FR2_nD3 2002.1.1 656-685 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002986973 Q87FR2_nD2 2002.1.1 191-655 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002986974 Q87FR2_nD1 11.1.1 21-115,136-185 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986975 Q87JM3_nD1 5085.1.1 31-460 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002986976 Q87LR9_nD2 2003.1.1 116-285 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002986977 Q87LR9_nD1 236.1.1 1-115,286-315 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002986978 Q87PP7_nD1 5084.1.1 21-159 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002986979 Q87P87_nD1 5085.1.1 36-450 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002986980 Q87K03_nD1 207.9.1 1-215 'Pentapeptide repeats' 'Pentapeptide repeats' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002986981 Q87KR8_nD3 101.1.9 306-510,532-550 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002986982 Q87KR8_nD4 192.15.1 291-305,551-585 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002986983 Q87KR8_nD2 101.1.8 171-290,601-685 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002986984 Q87KR8_nD5 192.7.1 701-850 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002986985 Q87KR8_nD1 186.1.1 21-170 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002986986 Q87T01_nD1 882.1.1 1-179 'Ribosomal protein L5' 'Ribosomal protein L5' 'Ribosomal protein L5' 'a+b two layers' 002986987 Q87MB9_nD1 5051.1.1 11-450 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002986988 Q87R50_nD1 11.1.1 46-130 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986989 Q87R50_nD3 11.1.1 221-310 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986990 Q87R50_nD4 11.1.1 311-395 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986991 Q87R50_nD6 11.1.1 476-565 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986992 Q87R50_nD10 11.1.1 836-1023 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986993 Q87R50_nD2 11.1.1 131-215 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986994 Q87R50_nD5 11.1.1 396-475 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986995 Q87R50_nD8 11.1.1 661-740 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986996 Q87R50_nD7 11.1.1 571-655 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986997 Q87R50_nD9 11.1.1 741-830 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002986998 Q87HX0_nD1 5.1.2 21-150 '5-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002986999 Q87FP9_nD3 2004.1.1 331-358 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987000 Q87FP9_nD2 2004.1.1 96-325 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987001 Q87FP9_nD1 2.1.1 11-95 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002987002 Q87T93_nD2 245.1.1 156-235 'Ribonuclease PH domain 2' 'Ribonuclease PH domain 2' 'Ribonuclease PH domain 2-like' 'a+b two layers' 002987003 Q87T93_nD1 212.1.1 1-155 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002987004 Q877L0_nD1 5022.1.1 11-70 'Subunit XII of photosystem I reaction centre, PsaM' 'Subunit XII of photosystem I reaction centre, PsaM' 'Subunit XII of photosystem I reaction centre, PsaM' 'extended segments' 002987005 Q87PU3_nD9 11.2.1 1001-1110 'C2 domain' 'C2 domain' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987006 Q87PU3_nD7 109.3.1 721-740,821-890 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987007 Q87PU3_nD5 4106.1.1 446-470,491-600 'Zinc hairpin stack' 'Zinc hairpin stack' 'Zinc hairpin stack' 'few secondary structure elements' 002987008 Q87PU3_nD8 601.45.1 891-1000,1111-1129 'Type VI secretion protein IcmF helical domain' 'Type VI secretion protein IcmF helical domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002987009 Q87PU3_nD2 2004.1.1 76-245,366-405 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987010 Q87PU3_nD6 109.4.1 601-720,741-760,791-820 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987011 Q87PU3_nD4 109.4.1 406-435,471-490 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987012 Q87PU3_nD3 327.9.1 231-375 'Probable GTPase Der, C-terminal domain' 'Probable GTPase Der, C-terminal domain' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987013 Q87PU3_nD1 3538.1.1 6-65 'MerF' 'MerF' 'MerF' 'extended segments' 002987014 Q87MN6_nD1 2003.1.5 6-260 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987015 Q87MN6_nD2 2003.1.3 261-350,406-480,571-670 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987016 Q87MN6_nD3 244.1.1 351-405,481-570 'FAD-linked reductases-C' 'FAD-linked reductases-C' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002987017 Q87JR4_nD1 5001.1.1 21-210 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002987018 Q87JR4_nD2 304.48.1 196-418 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987019 Q87JD1_nD1 101.1.1 16-90 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987020 Q87ML2_nD1 2.1.1 6-140 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002987021 Q87FN2_nD2 5050.1.1 201-400 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987022 Q87FN2_nD1 5050.1.1 6-200 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987023 Q87RQ2_nD1 2004.1.1 1-140 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987024 Q87RQ2_nD2 148.1.3 141-205 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987025 Q87RQ2_nD3 138.1.1 211-335 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'alpha arrays' 002987026 Q87NL0_nD1 3567.1.1 1-59 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002987027 Q87NS7_nD1 237.1.1 16-170 'ADP-ribosylation' 'ADP-ribosylation' 'ADP-ribosylation' 'a+b complex topology' 002987028 Q87FM1_nD2 206.1.3 111-400 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002987029 Q87FM1_nD1 2003.1.10 1-110 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987030 Q87FR6_nD1 3415.1.1 26-155 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002987031 Q87RU0_nD1 7574.1.1 6-310 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002987032 Q87RU0_nD2 7574.1.1 311-490 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002987033 Q87RU0_nD3 7522.1.1 491-620 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'a/b three-layered sandwiches' 002987034 Q87SX5_nD1 101.1.2 6-180 'winged' 'HTH' 'HTH' 'alpha arrays' 002987035 Q87J36_nD1 207.1.1 21-199 'Leucine-rich repeats' 'Leucine-rich repeats' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002987036 Q87NF4_nD1 247.1.1 1-218 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002987037 Q87N05_nD1 101.1.2 6-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002987038 Q87N05_nD2 628.1.1 81-275 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002987039 Q87LQ8_nD1 142.1.1 46-160 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002987040 Q87LQ8_nD2 101.1.1 161-315 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987041 Q87IF9_nD1 7574.1.1 6-355 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002987042 Q87G72_nD1 207.6.1 1-195 'Serralysin-like metalloprotease-C' 'Serralysin-like metalloprotease-C' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002987043 Q87GV7_nD1 304.28.1 36-115 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987044 Q87GV7_nD2 5067.1.1 1-35,116-290 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002987045 Q87P20_nD3 3318.1.1 136-160,236-315 'Middle domain in transcriptional anti-activator ExsD' 'Middle domain in transcriptional anti-activator ExsD' 'Middle domain in transcriptional anti-activator ExsD' 'alpha arrays' 002987046 Q87P20_nD2 192.20.1 166-235 'helical hairpin domain in transcriptional anti-activator ExsD' 'helical hairpin domain in transcriptional anti-activator ExsD' 'Long alpha-hairpin' 'alpha bundles' 002987047 Q87P20_nD1 3317.2.1 56-135 'N-terminal domain in transcriptional anti-activator ExsD' 'N-terminal domain in transcriptional anti-activator ExsD' 'KorB C-terminal domain-like' 'alpha arrays' 002987048 Q87HY3_nD3 7518.1.1 341-480 'PK C-terminal domain-like' 'PK C-terminal domain-like' 'PK C-terminal domain-like' 'a/b three-layered sandwiches' 002987049 Q87HY3_nD2 2002.1.1 1-70,171-340 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987050 Q87HY3_nD1 1.1.15 71-170 'PK beta-barrel domain-like' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987051 Q87FU8_nD1 1078.1.1 16-65 'Bd-type quinol oxidase transmembrane helix subunit' 'Bd-type quinol oxidase transmembrane helix subunit' 'Bd-type quinol oxidase transmembrane helix subunit' 'extended segments' 002987052 Q87H17_nD1 2004.1.1 11-273 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987053 Q79YZ2_nD2 2007.1.3 166-308 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987054 Q79YZ2_nD1 2.10.1 21-160 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002987055 Q87HS1_nD1 304.14.1 96-189 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002987056 Q87Q62_nD1 5084.5.1 16-390 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002987057 Q87NA9_nD1 5052.1.1 16-430 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'alpha complex topology' 002987058 Q87K66_nD1 1075.1.1 6-275 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987059 Q87RT3_nD1 5038.1.1 1-125 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002987060 Q87T23_nD1 2487.1.1 1-170 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002987061 Q87H83_nD3 2007.1.2 161-295,321-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987062 Q87H83_nD1 101.1.4 1-55 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002987063 Q87H83_nD2 2007.1.2 56-160,296-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987064 Q87NJ0_nD1 221.4.1 6-199 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002987065 P46232_nD1 2484.1.1 6-210 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987066 Q87HJ7_nD1 5050.1.1 6-435 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987067 Q87NP7_nD1 4267.1.1 16-95 'YefM-like' 'YefM-like' 'YefM-like' 'a+b duplicates or obligate multimers' 002987068 Q87FM9_nD3 309.1.1 476-720 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002987069 Q87FM9_nD4 309.1.1 721-910 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002987070 Q87FM9_nD2 309.1.1 256-475 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002987071 Q87FM9_nD1 309.1.1 26-255 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002987072 Q87TK4_nD1 2002.1.1 1-200 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987073 Q87SL2_nD1 230.1.1 6-119 'Tetrahydrobiopterin biosynthesis enzymes-like' 'Tetrahydrobiopterin biosynthesis enzymes-like' 'T-fold' 'a+b two layers' 002987074 Q87FT5_nD3 11.1.1 566-660 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987075 Q87FT5_nD4 11.1.1 661-875 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987076 Q87FT5_nD1 2002.1.1 21-465 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987077 Q87FT5_nD2 12.1.1 466-560 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002987078 Q87LS5_nD1 1189.1.1 6-150 'VSG (variant surface glycoprotein) N-terminal domain' 'VSG (variant surface glycoprotein) N-terminal domain' 'VSG (variant surface glycoprotein) N-terminal domain' 'a+b complex topology' 002987079 Q87LS5_nD2 282.1.1 171-330 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002987080 Q87LS5_nD3 217.2.1 331-420 'CorC/HlyC domain-like' 'CorC/HlyC domain-like' 'FAD-binding domain-like' 'a+b complex topology' 002987081 Q87K53_nD4 331.1.1 201-305 'TATA-box binding protein-like' 'TATA-box binding protein-like' 'TBP-like' 'a+b two layers' 002987082 Q87K53_nD3 101.1.1 141-190 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987083 Q87K53_nD5 102.1.2 306-455 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002987084 Q87K53_nD2 101.1.1 86-140 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987085 Q87K53_nD1 901.1.1 11-80 'Ada DNA repair protein, N-terminal domain (N-Ada 10)' 'Ada DNA repair protein, N-terminal domain (N-Ada 10)' 'Ada DNA repair protein, N-terminal domain (N-Ada 10)' 'few secondary structure elements' 002987086 Q87N00_nD3 304.48.1 6-20,301-485 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987087 Q87N00_nD2 223.1.1 21-65,121-285 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987088 Q87N00_nD1 UNASSIGNED 76-120 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987089 Q87SF0_nD1 7014.1.1 1-245 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002987090 Q87J53_nD3 886.1.1 126-289 'Probable bacterial effector-binding domain' 'Probable bacterial effector-binding domain' 'Probable bacterial effector-binding domain' 'a+b duplicates or obligate multimers' 002987091 Q87J53_nD2 101.1.1 61-125 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987092 Q87J53_nD1 101.1.1 6-60 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987093 Q87TL5_nD2 9.1.1 231-350 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002987094 Q87TL5_nD1 11.1.1 121-225 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987095 Q87TL5_nD3 11.1.1 351-515 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987096 Q87KA5_nD1 563.1.1 1-175 'N-terminal domain of the delta subunit of the F1F0-ATP synthase' 'N-terminal domain of the delta subunit of the F1F0-ATP synthase' 'ATPD N-terminal domain-like' 'alpha bundles' 002987097 Q87Q54_nD1 2003.1.5 6-215 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987098 Q87J81_nD1 206.1.3 11-350 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002987099 Q87J81_nD2 2487.1.1 351-475 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002987100 Q87J81_nD3 2002.1.1 486-790 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987101 Q87FX0_nD2 604.1.1 41-95 'Spectrin repeat' 'Spectrin repeat' 'Spectrin repeat-like' 'alpha bundles' 002987102 Q87FX0_nD1 5035.1.1 11-35 'Photosystem II reaction center protein I, PsbI' 'Photosystem II reaction center protein I, PsbI' 'Photosystem II reaction center protein I, PsbI' 'extended segments' 002987103 Q87QR3_nD1 1103.1.1 6-115 'uncharacterized protein LPG2148 insertion domain' 'uncharacterized protein LPG2148 insertion domain' 'uncharacterized protein LPG2148 insertion domain' 'mixed a+b and a/b' 002987104 Q87ID3_nD1 7543.1.1 6-150 'Methylglyoxal synthase-like' 'Methylglyoxal synthase-like' 'Methylglyoxal synthase-like' 'a/b three-layered sandwiches' 002987105 Q87G99_nD1 4028.1.1 6-415 'Barrel domain in heme-dependent catalases' 'Barrel domain in heme-dependent catalases' 'Barrel domain in heme-dependent catalases' 'beta barrels' 002987106 Q87G99_nD2 4048.1.1 416-475 'Second alpha-helical domain in heme-dependent catalases' 'Second alpha-helical domain in heme-dependent catalases' 'Second alpha-helical domain in heme-dependent catalases' 'alpha bundles' 002987107 Q87NN3_nD1 4205.1.1 6-125 'SMI1/KNR4-like' 'SMI1/KNR4-like' 'SMI1/KNR4-like' 'a+b two layers' 002987108 Q87KD1_nD2 5054.1.1 166-260 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987109 Q87KD1_nD1 5054.1.1 6-145 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987110 Q87KD1_nD4 5054.1.1 371-480 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987111 Q87KD1_nD3 5054.1.1 261-370 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987112 Q87GS6_nD2 206.1.1 51-435 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002987113 Q87GS6_nD1 1007.1.1 16-50 'SopD C-terminal domain' 'SopD C-terminal domain' 'SopD C-terminal domain' 'alpha arrays' 002987114 Q87Q37_nD1 159.1.4 1-130,156-190 'Type II deoxyuridine triphosphatase-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002987115 Q87Q37_nD2 221.1.5 131-155 'Chemotaxis inhibitory protein CHIPS' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002987116 Q87N69_nD4 2485.1.1 551-700 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987117 Q87N69_nD3 1079.1.1 301-545 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002987118 Q87N69_nD1 11.1.1 31-185 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987119 Q87N69_nD2 11.1.1 186-290 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987120 Q87R70_nD1 880.1.1 1-425 'ADC synthase' 'ADC synthase' 'ADC synthase' 'a+b duplicates or obligate multimers' 002987121 Q87Q61_nD1 601.14.1 1-155 'Hemerythrin' 'Hemerythrin' 'Four-helical up-and-down bundle' 'alpha bundles' 002987122 Q87Q61_nD2 304.48.1 176-370 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987123 Q87K05_nD1 2006.1.1 6-200 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002987124 Q87Q28_nD1 316.1.1 1-145,176-250 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002987125 Q87Q28_nD2 316.1.1 146-175 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002987126 Q87QE8_nD4 225.1.1 401-560 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002987127 Q87QE8_nD3 605.1.1 311-400 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987128 Q87QE8_nD1 7523.1.1 86-205 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987129 Q87QE8_nD2 7523.1.1 6-85,206-310 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987130 Q87GQ3_nD5 109.4.1 921-1100 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987131 Q87GQ3_nD2 11.1.1 136-160,211-320 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987132 Q87GQ3_nD1 382.1.1 1-135,161-210 'Snake toxin-like' 'Snake toxin-like' 'Snake toxin-like' 'few secondary structure elements' 002987133 Q87GQ3_nD4 109.4.1 606-920 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987134 Q87GQ3_nD3 300.1.1 401-590 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002987135 Q87QS4_nD2 539.1.1 61-95 'Crustacean Hyperglycemic Hormone (CHH)-like' 'Crustacean Hyperglycemic Hormone (CHH)-like' 'Crustacean Hyperglycemic Hormone (CHH)-like' 'few secondary structure elements' 002987136 Q87QS4_nD1 3922.1.1 26-50 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002987137 Q87QS4_nD3 7111.1.1 121-145 'Ubiquinol-cytochrome C chaperone, C-terminal domain' 'Ubiquinol-cytochrome C chaperone, C-terminal domain' 'Ubiquinol-cytochrome C chaperone, C-terminal domain' 'alpha bundles' 002987138 Q87FR1_nD1 235.1.1 21-220 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002987139 Q87N43_nD2 2486.1.1 46-55,96-345 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002987140 Q87N43_nD1 9.10.1 56-95 'Uncharacterized protein bvu_3222' 'Uncharacterized protein bvu_3222' 'Lipocalins/Streptavidin' 'beta barrels' 002987141 Q87J99_nD2 7523.1.1 146-265,326-355 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987142 Q87J99_nD1 7523.1.1 31-145,266-325 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987143 Q87MP4_nD1 304.14.1 121-200 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002987144 Q87LB5_nD1 274.1.1 36-65 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002987145 Q79YT9_nD1 3355.1.1 1-443 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002987146 Q87PK6_nD1 2004.1.1 6-170 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987147 Q87PK6_nD5 70.1.1 511-590 'MoeA C-terminal domain-like' 'MoeA C-terminal domain-like' 'beta-clip' 'beta barrels' 002987148 Q87PK6_nD2 3052.1.1 236-325 'MoeA domain II' 'MoeA domain II' 'MoeA domain II' 'a+b complex topology' 002987149 Q87PK6_nD4 7541.1.1 191-210,361-510 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'a/b three-layered sandwiches' 002987150 Q87PK6_nD3 275.1.1 211-235,326-360 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002987151 Q87T74_nD1 206.1.1 16-235 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002987152 Q87TQ8_nD1 7020.1.1 16-40 'Influenza A M2 transmembrane domain' 'Influenza A M2 transmembrane domain' 'Influenza A M2 transmembrane domain' 'few secondary structure elements' 002987153 Q87MT0_nD3 2003.1.2 471-620 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987154 Q87MT0_nD1 2002.1.1 1-335 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987155 Q87MT0_nD2 2003.1.2 336-470,621-665 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987156 Q87HR2_nD2 10.12.1 161-238 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987157 Q87HR2_nD1 10.12.1 1-75 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987158 Q87SX4_nD1 5074.1.1 11-50 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'extended segments' 002987159 Q87PI0_nD1 109.4.1 21-305 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987160 Q87IZ2_nD2 2003.1.1 401-610 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987161 Q87IZ2_nD1 3236.1.1 6-400 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002987162 Q87MZ7_nD1 5065.1.1 6-290 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002987163 Q87TI6_nD1 3513.1.1 26-55 'Putative lipoprotein LppA' 'Putative lipoprotein LppA' 'Putative lipoprotein LppA' 'a+b two layers' 002987164 Q87QD5_nD3 375.15.1 371-430 'Zinc finger domain of DNA repair helicase RadD' 'Zinc finger domain of DNA repair helicase RadD' 'Rubredoxin-like' 'few secondary structure elements' 002987165 Q87QD5_nD4 7091.1.1 431-583 'C-terminal domain of DNA repair helicase RadD' 'C-terminal domain of DNA repair helicase RadD' 'C-terminal domain of DNA repair helicase RadD' 'a+b complex topology' 002987166 Q87QD5_nD2 2004.1.1 196-370 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987167 Q87QD5_nD1 2004.1.1 1-195 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987168 Q87JI2_nD3 306.8.1 261-285,331-373 'TM1457-like' 'TM1457-like' 'Glucose permease domain IIB-like' 'a+b two layers' 002987169 Q87JI2_nD2 304.136.1 26-40,186-255 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002987170 Q87JI2_nD1 1.1.5 41-185 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987171 Q87IF5_nD1 11.1.5 26-150 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987172 Q87HZ1_nD1 246.3.1 11-324 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002987173 Q87IC2_nD1 2002.1.1 6-430 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987174 Q87IJ2_nD1 5069.1.1 11-175 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002987175 Q87FP2_nD2 375.1.1 121-170 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002987176 Q87FP2_nD1 101.1.4 26-120 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002987177 Q87RC5_nD1 812.1.1 36-85 'Cell division protein MinE topological specificity domain' 'Cell division protein MinE topological specificity domain' 'MinE-like' 'a+b duplicates or obligate multimers' 002987178 Q87NL6_nD3 375.1.1 56-100 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002987179 Q87NL6_nD4 375.1.1 101-145 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002987180 Q87NL6_nD1 192.2.1 1-30 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002987181 Q87NL6_nD2 3470.1.1 31-55 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002987182 Q87NL6_nD5 2492.1.1 146-225 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002987183 Q87GX2_nD1 2011.1.1 1-205,321-405 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002987184 Q87GX2_nD2 304.25.1 206-320 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002987185 Q87P65_nD1 5050.1.1 1-135,251-385 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987186 Q87P65_nD2 5056.1.1 136-185,441-490 'Gated mechanosensitive channel' 'Gated mechanosensitive channel' 'Gated mechanosensitive channel' 'extended segments' 002987187 Q87P65_nD3 5051.1.1 206-225,396-440 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002987188 Q87NI5_nD1 230.1.1 16-135 'Tetrahydrobiopterin biosynthesis enzymes-like' 'Tetrahydrobiopterin biosynthesis enzymes-like' 'T-fold' 'a+b two layers' 002987189 Q87RC7_nD3 327.5.1 456-560 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987190 Q87RC7_nD1 7584.1.1 21-205 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002987191 Q87RC7_nD2 323.1.1 206-455 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002987192 Q87L79_nD1 5084.5.1 1-390 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002987193 Q87R08_nD2 4981.1.1 51-165 'YfbU-like, C-terminal subdomain' 'YfbU-like, C-terminal subdomain' 'YfbU-like, C-terminal subdomain' 'alpha arrays' 002987194 Q87R08_nD1 4359.1.1 1-50 'YfbU-like, N-terminal subdomain' 'YfbU-like, N-terminal subdomain' 'YfbU-like, N-terminal subdomain' 'alpha duplicates or obligate multimers' 002987195 Q87Q31_nD2 7512.1.1 196-370 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002987196 Q87Q31_nD1 7512.1.1 1-50,76-195 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002987197 Q87L89_nD1 896.1.1 1-75 'Signal recognition particle alu RNA binding heterodimer SRP9/14-related' 'Signal recognition particle alu RNA binding heterodimer SRP9/14-related' 'SRP9/14-like' 'a+b two layers' 002987198 Q87QC8_nD1 107.1.1 26-120 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002987199 Q87QC8_nD2 107.1.1 121-205 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002987200 Q87HV0_nD1 5051.1.1 1-155,196-310 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002987201 Q87HV0_nD2 3226.1.1 166-195 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002987202 Q87N72_nD1 2003.1.5 11-224 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987203 Q87T46_nD1 2003.1.1 1-290 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987204 Q87QP3_nD1 71.1.1 26-205 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002987205 Q87L90_nD4 7514.1.1 471-623 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002987206 Q87L90_nD3 3687.1.1 306-405 'NADPH-cytochrome p450 reductase helical insertion domain' 'NADPH-cytochrome p450 reductase helical insertion domain' 'NADPH-cytochrome p450 reductase helical insertion domain' 'alpha bundles' 002987207 Q87L90_nD2 1.1.7 241-305,406-470 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987208 Q87L90_nD1 2007.2.1 36-60,81-235 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987209 Q87TE9_nD1 11.1.1 91-190 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987210 Q87FV6_nD1 2008.1.1 11-175 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002987211 Q87FV6_nD2 148.1.1 181-240 'Histone' 'Histone-related' 'Histone-like' 'alpha arrays' 002987212 Q87FV6_nD3 241.5.1 276-368 'DNA-binding C-terminal domain of the transcription factor MotA' 'DNA-binding C-terminal domain of the transcription factor MotA' 'Type III secretory system chaperone-like' 'a+b two layers' 002987213 Q56712_nD1 601.51.1 1-170,281-384 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002987214 Q56712_nD2 3019.1.1 171-280 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002987215 Q79YY2_nD3 103.1.1 341-379 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002987216 Q79YY2_nD2 331.1.1 201-335 'TATA-box binding protein-like' 'TATA-box binding protein-like' 'TBP-like' 'a+b two layers' 002987217 Q79YY2_nD1 331.1.1 41-55,81-200 'TATA-box binding protein-like' 'TATA-box binding protein-like' 'TBP-like' 'a+b two layers' 002987218 Q87K07_nD2 304.4.1 61-145 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002987219 Q87K07_nD1 101.1.2 1-55 'winged' 'HTH' 'HTH' 'alpha arrays' 002987220 Q87LQ0_nD2 2002.1.1 131-433 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987221 Q87LQ0_nD1 218.1.1 1-130 'Enolase N-terminal domain-like' 'Enolase N-terminal domain-like' 'Enolase-N/ribosomal protein' 'a+b two layers' 002987222 Q87QW5_nD1 2003.1.5 6-260 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987223 Q87T35_nD2 2003.1.1 141-260 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987224 Q87T35_nD1 4953.1.1 1-135 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002987225 Q87T35_nD3 2003.1.1 261-630 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987226 Q87H86_nD1 2011.2.1 6-243 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002987227 Q87LI9_nD2 223.3.1 1-60,196-305 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002987228 Q87LI9_nD1 4019.1.1 61-195 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002987229 Q87LH0_nD2 3523.1.1 146-240 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'beta meanders' 002987230 Q87LH0_nD1 1075.1.1 6-135,241-355 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987231 Q87S02_nD1 5051.1.1 6-500 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002987232 Q87I46_nD1 213.1.1 11-185 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987233 Q87T54_nD2 221.8.1 151-245 'GfcC' 'GfcC' 'beta-Grasp' 'a+b two layers' 002987234 Q87T54_nD1 221.8.1 31-150 'GfcC' 'GfcC' 'beta-Grasp' 'a+b two layers' 002987235 Q87J89_nD1 325.1.7 71-110,181-215 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987236 Q87J89_nD2 5086.1.1 111-180 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987237 Q87J89_nD4 1.1.7 46-55,296-370 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987238 Q87J89_nD3 1.1.7 56-70,216-295 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987239 Q87JT6_nD2 2007.1.14 171-308 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987240 Q87JT6_nD1 2007.1.14 26-170 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987241 Q87SS0_nD1 7574.1.1 6-185 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002987242 Q87SS0_nD2 2003.1.4 186-365 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987243 Q87SS0_nD3 7574.1.1 366-570 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002987244 Q87HS7_nD1 2003.1.1 1-335 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987245 Q87PF7_nD1 11.1.1 46-128 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987246 Q87ID6_nD1 562.1.1 23-55 'NblA-like (Pfam 04485)' 'NblA-like (Pfam 04485)' 'NblA-like (Pfam 04485)' 'alpha duplicates or obligate multimers' 002987247 Q87M45_nD2 2004.1.1 146-400 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987248 Q87M45_nD1 2007.1.3 6-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987249 Q87QW8_nD1 629.1.1 1-215 'TorD-like (Pfam 06192)' 'TorD-like (Pfam 06192)' 'TorD-like (Pfam 06192)' 'alpha bundles' 002987250 Q87HB9_nD1 601.3.1 1-113 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002987251 Q87HA7_nD1 7523.1.1 116-255,426-454 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987252 Q87HA7_nD2 7523.1.1 31-115,256-440 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987253 Q87QM5_nD1 1015.1.1 6-165 'Insulin-induced gene (Insig) homologs' 'Insulin-induced gene (Insig) homologs' 'Insulin-induced gene (Insig) homologs' 'alpha complex topology' 002987254 Q87LG8_nD2 2011.1.1 181-500 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002987255 Q87LG8_nD1 7529.1.1 1-180 'Macro domain-like' 'Macro domain-like' 'Macro domain-like' 'a/b three-layered sandwiches' 002987256 Q87T57_nD1 7558.1.1 26-329 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002987257 Q87HZ6_nD1 5084.1.1 26-190 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002987258 Q87HJ5_nD2 304.31.2 21-145,256-415 'Substrate-binding domain of HMG-CoA reductase' 'HMG-CoA reductase' 'Alpha-beta plaits' 'a+b two layers' 002987259 Q87HJ5_nD1 304.31.1 146-255 'NAD-binding domain of HMG-CoA reductase' 'HMG-CoA reductase' 'Alpha-beta plaits' 'a+b two layers' 002987260 Q87PK8_nD2 2484.1.1 101-300 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987261 Q87PK8_nD1 2484.1.1 1-100 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987262 Q87M02_nD5 1.1.7 576-690 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987263 Q87M02_nD2 4207.1.1 66-95 'RNA polymerase II holoenzyme component SRB7 (MED21)' 'Mediator hinge subcomplex-like' 'Mediator hinge subcomplex-like' 'alpha duplicates or obligate multimers' 002987264 Q87M02_nD6 7526.1.1 691-800 'Initiation factor IF2/eIF5b, domain 3' 'Initiation factor IF2/eIF5b, domain 3' 'Initiation factor IF2/eIF5b, domain 3' 'a/b three-layered sandwiches' 002987265 Q87M02_nD1 101.1.9 1-55 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002987266 Q87M02_nD4 101.1.9 331-575 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002987267 Q87M02_nD3 3462.1.1 101-235 'V-type proton ATPase subunit G' 'V-type proton ATPase subunit G' 'V-type proton ATPase subunit G' 'extended segments' 002987268 Q87M02_nD7 1.1.7 806-900 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987269 Q87JE3_nD1 1.1.9 1-119 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987270 Q87LV3_nD1 304.45.1 1-160 '6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK' '6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK' 'Alpha-beta plaits' 'a+b two layers' 002987271 Q87NB1_nD2 323.1.1 166-410 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002987272 Q87NB1_nD1 7584.1.1 1-165 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002987273 Q87NB1_nD3 327.5.1 411-510 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987274 Q87KK1_nD1 1.1.9 1-150 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987275 Q87K20_nD1 6155.2.1 6-170 'PnuC' 'PnuC' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002987276 Q87HD0_nD1 2499.2.1 36-130 'Domain III of tail sheath protein Gp18' 'Domain III of tail sheath protein Gp18' 'Subtilisin-like' 'a/b three-layered sandwiches' 002987277 Q87HD0_nD2 2499.2.1 131-159 'Domain III of tail sheath protein Gp18' 'Domain III of tail sheath protein Gp18' 'Subtilisin-like' 'a/b three-layered sandwiches' 002987278 Q87SZ9_nD1 320.2.1 6-65 'Ribosomal protein S8, N-terminal domain' 'Ribosomal protein S8, N-terminal domain' 'R3H domain-like' 'a+b two layers' 002987279 Q87SZ9_nD2 4988.1.1 71-130 'Ribosomal protein S8, C-terminal domain' 'Ribosomal protein S8, C-terminal domain' 'Ribosomal protein S8, C-terminal domain' 'a+b two layers' 002987280 Q87MS0_nD1 4244.1.1 31-295 'EreA/ChaN-like' 'EreA/ChaN-like' 'EreA/ChaN-like' 'a/b three-layered sandwiches' 002987281 Q87I37_nD1 101.1.4 16-145 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002987282 Q87IT1_nD1 5059.1.1 1-295 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002987283 Q87SG8_nD3 7570.1.1 316-454 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'a/b three-layered sandwiches' 002987284 Q87SG8_nD2 2004.1.1 86-315 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987285 Q87SG8_nD1 2493.1.1 1-85 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'a/b three-layered sandwiches' 002987286 Q87JL9_nD1 2007.2.2 1-90 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987287 Q87P15_nD1 7524.1.1 1-260,481-500 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002987288 Q87P15_nD2 7524.1.1 261-480 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002987289 Q87RM9_nD1 299.1.1 1-155 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'a+b complex topology' 002987290 Q87P63_nD1 7523.1.1 26-120,256-323 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987291 Q87P63_nD2 7523.1.1 121-255 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987292 Q87T27_nD1 101.1.2 1-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002987293 Q87T27_nD2 873.1.1 76-204 'H-NOX domain' 'H-NOX domain' 'H-NOX domain' 'a+b complex topology' 002987294 Q87LY2_nD2 3755.3.1 136-160 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002987295 Q87LY2_nD1 3110.1.1 86-125 'STT3/PglB/AglB core domain' 'STT3/PglB/AglB core domain' 'STT3/PglB/AglB core domain' 'a/b three-layered sandwiches' 002987296 Q87LY2_nD3 5054.1.1 31-85,161-360 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987297 Q87JA0_nD1 7515.1.1 1-274 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002987298 Q87PY0_nD1 304.4.1 1-95 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002987299 Q87T48_nD1 2003.1.1 1-360 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987300 Q87HE0_nD1 3174.3.1 6-95 'PAAR-repeat protein' 'PAAR-repeat protein' 'Ribosomal protein L14-like' 'beta barrels' 002987301 Q87L56_nD1 7531.1.1 1-263 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002987302 Q87PU8_nD2 283.2.1 366-485 'gpW/gp25-like' 'gpW/gp25-like' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002987303 Q87PU8_nD1 2499.2.1 41-365 'Domain III of tail sheath protein Gp18' 'Domain III of tail sheath protein Gp18' 'Subtilisin-like' 'a/b three-layered sandwiches' 002987304 Q87NT0_nD1 101.1.1 6-90 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987305 Q87KS1_nD3 109.4.1 321-390 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987306 Q87KS1_nD4 3839.1.1 456-590 'Rabies virus phosphoprotein dimerization domain' 'Rabies virus phosphoprotein dimerization domain' 'Viral phosphoprotein dimerization domain' 'alpha duplicates or obligate multimers' 002987307 Q87KS1_nD2 109.4.1 31-50,116-320,391-450 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987308 Q87KS1_nD5 2485.3.1 591-785 'Major capsid protein gp5' 'Major capsid protein gp5' 'Thioredoxin-like' 'a+b three layers' 002987309 Q87KS1_nD1 3456.1.1 1-30,51-115 'NADH-quinone oxidoreductase subunit A' 'NADH-quinone oxidoreductase subunit A' 'NADH-quinone oxidoreductase subunit A' 'extended segments' 002987310 Q87FG9_nD1 608.1.1 31-245 'AhpD-like' 'AhpD-like' 'AhpD-like' 'alpha arrays' 002987311 Q87JH8_nD3 4031.1.1 301-345 'Nigritoxin middle domain' 'Nigritoxin middle domain' 'Nigritoxin middle domain' 'a+b three layers' 002987312 Q87JH8_nD1 601.51.1 51-140,246-295 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002987313 Q87JH8_nD2 3019.1.1 141-245 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002987314 Q87LN4_nD2 807.1.1 176-200 'Allophycocyanin linker chain (domain)' 'Allophycocyanin linker chain (domain)' 'Allophycocyanin linker chain (domain)' 'a+b two layers' 002987315 Q87LN4_nD1 564.1.1 6-70 'N-terminal, cytoplasmic domain of anti-sigma factors' 'N-terminal, cytoplasmic domain of anti-sigma factors' 'N-terminal, cytoplasmic domain of anti-sigma factors' 'alpha arrays' 002987316 Q87KN0_nD1 7558.1.1 11-205 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002987317 Q87KN0_nD2 7519.1.1 211-245 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'a/b three-layered sandwiches' 002987318 Q87KN0_nD4 101.1.2 616-805 'winged' 'HTH' 'HTH' 'alpha arrays' 002987319 Q87KN0_nD3 101.1.2 246-435,461-615 'winged' 'HTH' 'HTH' 'alpha arrays' 002987320 Q87HJ4_nD2 3144.1.1 36-65,91-105,357-385,421-520 'PBS linker domain of phycobilisome linker polypeptide' 'PBS linker domain of phycobilisome linker polypeptide' 'PBS linker domain of phycobilisome linker polypeptide' 'alpha arrays' 002987321 Q87HJ4_nD1 3144.1.1 66-75,106-195,261-340,402-420 'PBS linker domain of phycobilisome linker polypeptide' 'PBS linker domain of phycobilisome linker polypeptide' 'PBS linker domain of phycobilisome linker polypeptide' 'alpha arrays' 002987322 Q79YV8_nD4 101.1.1 401-465 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987323 Q79YV8_nD3 148.1.3 301-375 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987324 Q79YV8_nD2 2004.1.1 121-300 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987325 Q79YV8_nD1 2007.1.3 1-120 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987326 Q87K48_nD1 708.1.2 1-120 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002987327 Q87FU7_nD3 325.1.7 41-80,151-190 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987328 Q87FU7_nD4 1.1.7 31-40,191-290 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987329 Q87FU7_nD1 1.1.7 1-30 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987330 Q87FU7_nD2 5086.1.1 81-150 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987331 Q87QE1_nD1 213.1.1 11-75 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987332 Q87QE1_nD2 213.1.1 76-230 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987333 Q87IQ4_nD1 2.1.1 6-69 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002987334 Q87S25_nD2 622.1.1 76-170 'HSC20 (HSCB), C-terminal oligomerisation domain' 'HSC20 (HSCB), C-terminal oligomerisation domain' 'YvfG-like' 'alpha bundles' 002987335 Q87S25_nD1 650.1.1 1-75 'Chaperone J-domain' 'Chaperone J-domain' 'Chaperone J-domain' 'alpha bundles' 002987336 Q87H84_nD1 3826.1.1 1-70 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'alpha bundles' 002987337 Q87P01_nD2 1075.1.1 1-40,171-375 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987338 Q87P01_nD1 7523.1.1 46-170 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987339 Q87P37_nD1 241.1.1 1-140 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002987340 Q87FN3_nD1 7565.1.1 6-140 'Resolvase-like' 'Resolvase-like' 'Resolvase-like' 'a/b three-layered sandwiches' 002987341 Q87FN3_nD2 101.1.1 156-215 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987342 Q87R72_nD1 131.1.1 6-190 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002987343 Q87H09_nD1 2005.1.1 1-225 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002987344 Q87H39_nD1 2486.1.1 6-535 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002987345 Q87KR0_nD1 2002.1.1 1-355 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987346 Q87KP2_nD1 304.9.1 51-145 'RNA-binding domain, RBD' 'RNA-binding domain, RBD' 'Alpha-beta plaits' 'a+b two layers' 002987347 Q87IJ5_nD2 2484.1.1 196-395 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987348 Q87IJ5_nD1 2484.1.1 1-195 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987349 Q87JL1_nD2 2.4.1 241-370 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002987350 Q87JL1_nD1 2004.1.1 6-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987351 Q87HL6_nD1 101.1.2 6-100 'winged' 'HTH' 'HTH' 'alpha arrays' 002987352 Q87K40_nD1 5074.1.1 16-45 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'extended segments' 002987353 Q87QC5_nD1 1075.5.1 6-230 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987354 Q87QC5_nD2 1075.5.1 231-455 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987355 Q87I49_nD1 5059.1.1 1-290 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002987356 Q87S28_nD2 3016.1.1 281-400 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002987357 Q87S28_nD1 7577.1.1 6-300 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002987358 Q87H24_nD1 608.1.1 6-120 'AhpD-like' 'AhpD-like' 'AhpD-like' 'alpha arrays' 002987359 Q87LV1_nD2 283.1.1 181-280 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002987360 Q87LV1_nD1 2005.1.1 1-180 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002987361 Q87RB4_nD1 222.1.1 6-150 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002987362 Q87HN8_nD1 5001.1.1 11-235 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002987363 Q87HN8_nD2 304.48.1 236-410 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987364 P0A498_nD1 919.1.1 1-35 'Ribosomal protein L36' 'Ribosomal protein L36' 'Ribosomal protein L36' 'few secondary structure elements' 002987365 Q87JK8_nD1 5059.1.1 1-300 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002987366 Q87L02_nD1 205.1.1 6-315 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002987367 Q87L02_nD2 109.4.1 316-355 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987368 Q87JE7_nD1 109.3.1 21-155 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987369 Q87SX1_nD1 2004.1.1 6-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987370 Q87SD8_nD1 223.1.1 36-145 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987371 Q87SD8_nD2 223.1.1 151-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987372 Q87SD8_nD3 223.1.1 266-410 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987373 Q87SD8_nD4 304.48.1 411-580 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987374 Q87KP8_nD1 150.1.1 16-65 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002987375 Q87KP8_nD2 5027.1.1 66-120 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'extended segments' 002987376 Q87SD9_nD1 2002.1.1 1-315 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987377 Q87N53_nD1 7516.1.1 1-235 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002987378 Q87SP9_nD1 UNASSIGNED 71-125 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987379 Q87NT8_nD1 5046.1.1 6-35 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002987380 Q87JH6_nD3 4261.1.1 526-595 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002987381 Q87JH6_nD2 2003.1.1 396-525 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987382 Q87JH6_nD1 3236.1.1 6-390 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002987383 Q87N82_nD1 2007.1.1 1-190 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987384 Q87N82_nD2 101.1.1 196-250 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987385 Q87N82_nD3 101.1.1 251-304 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987386 Q87Q18_nD1 7523.1.1 26-135,266-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987387 Q87Q18_nD2 7523.1.1 136-265,331-355 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987388 Q87KV2_nD3 4953.1.1 401-455 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002987389 Q87KV2_nD1 4952.1.1 6-130 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'alpha arrays' 002987390 Q87KV2_nD2 602.1.1 131-400 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'alpha arrays' 002987391 Q87NP6_nD1 5025.1.1 1-30 'PetL subunit of the cytochrome b6f complex' 'PetL subunit of the cytochrome b6f complex' 'PetL subunit of the cytochrome b6f complex' 'extended segments' 002987392 Q87IJ0_nD1 2486.1.1 6-275 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002987393 Q87QH0_nD1 102.1.2 6-185 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002987394 Q87MZ5_nD1 3712.1.1 6-95,126-135 'Mediator of RNA polymerase II transcription subunit 11' 'Mediator of RNA polymerase II transcription subunit 11' 'Mediator of RNA polymerase II transcription subunit 11' 'a+b complex topology' 002987395 Q87K64_nD1 101.1.2 11-120 'winged' 'HTH' 'HTH' 'alpha arrays' 002987396 Q87PY3_nD2 7523.1.1 91-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987397 Q87PY3_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002987398 Q87GI0_nD1 6041.1.1 221-245 'DUF1107-like' 'DUF1107-like' 'DUF1107-like' 'a+b two layers' 002987399 Q87S83_nD1 6028.1.1 21-110 'Ribosome modulation factor' 'Ribosome modulation factor' 'Ribosome modulation factor' 'alpha bundles' 002987400 P46233_nD2 301.3.1 176-290 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002987401 P46233_nD1 3659.1.1 21-175 'MotY N-terminal domain' 'MotY N-terminal domain' 'MotY N-terminal domain' 'a+b two layers' 002987402 Q87SP8_nD2 304.133.1 51-165 '26 kDa periplasmic immunogenic protein' '26 kDa periplasmic immunogenic protein' 'Alpha-beta plaits' 'a+b two layers' 002987403 Q87SP8_nD1 304.48.1 6-30 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987404 Q87SP8_nD3 304.133.1 36-50,166-235 '26 kDa periplasmic immunogenic protein' '26 kDa periplasmic immunogenic protein' 'Alpha-beta plaits' 'a+b two layers' 002987405 Q87JJ5_nD2 4021.1.1 166-455 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha arrays' 002987406 Q87JJ5_nD1 298.3.1 6-155 'Serine dehydratase beta chain-like' 'Serine dehydratase beta chain-like' 'FwdE/GAPDH domain-like' 'a+b two layers' 002987407 Q87QN7_nD1 7577.1.1 26-330 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002987408 Q87QN7_nD2 3016.1.1 331-425 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002987409 Q87NK1_nD1 131.1.1 6-195 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002987410 Q87TQ3_nD1 284.1.1 26-120 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002987411 Q87TA3_nD2 3409.1.1 176-240 'Vacuolar protein sorting-associated protein 30 BARA domain' 'Vacuolar protein sorting-associated protein 30 BARA domain' 'Vacuolar protein sorting-associated protein 30 BARA domain' 'a+b duplicates or obligate multimers' 002987412 Q87TA3_nD1 3860.1.1 31-175 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002987413 Q87M12_nD2 304.48.1 241-415 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002987414 Q87M12_nD1 223.1.1 6-240 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987415 Q87M12_nD3 2002.5.1 416-675 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002987416 Q87N87_nD3 7523.1.1 166-255 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987417 Q87N87_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002987418 Q87N87_nD2 7523.1.1 91-165,256-285 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987419 Q87NY3_nD1 223.1.1 16-185 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987420 Q87NY3_nD2 4168.1.1 191-245 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002987421 Q87NY3_nD3 605.1.1 246-325 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987422 Q87NY3_nD4 225.1.1 331-475 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002987423 Q87SF7_nD3 3281.1.1 836-860 'NADH-quinone oxidoreductase subunit L (NuoL)-related' 'Sodium/proton antiporter subunits-like' 'Sodium/proton antiporter subunits-like' 'alpha complex topology' 002987424 Q87SF7_nD2 161.1.1 16-225,376-595,621-830 'Helical scaffold and wing domains of SecA' 'Helical scaffold and wing domains of SecA' 'Helical scaffold and wing domains of SecA' 'alpha complex topology' 002987425 Q87SF7_nD1 570.1.1 231-370 'Pre-protein crosslinking domain of SecA' 'Pre-protein crosslinking domain of SecA' 'Pre-protein crosslinking domain of SecA' 'alpha arrays' 002987426 Q87JV4_nD1 2003.1.11 1-100,301-330 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987427 Q87JV4_nD2 2003.1.1 101-300 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987428 Q87NG4_nD4 5086.1.1 356-615 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987429 Q87NG4_nD3 4168.1.1 291-350 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002987430 Q87NG4_nD1 3757.1.1 1-30,271-290 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002987431 Q87NG4_nD2 223.1.1 31-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987432 Q87QZ1_nD3 2004.1.1 486-610,631-690 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987433 Q87QZ1_nD1 2004.1.1 6-260,436-485 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987434 Q87QZ1_nD2 3636.1.1 261-435 'XPD arch domain' 'XPD arch domain' 'XPD arch domain' 'a+b two layers' 002987435 Q87GH1_nD1 3799.1.1 26-80,346-383 'SabA N-terminal extracellular adhesion domain' 'SabA N-terminal extracellular adhesion domain' 'SabA N-terminal extracellular adhesion domain' 'alpha bundles' 002987436 Q87GH1_nD2 142.1.1 81-345 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002987437 Q87Q03_nD2 7523.1.1 26-65,191-290,506-535 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987438 Q87Q03_nD1 304.136.1 66-190 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002987439 Q87Q03_nD3 7523.1.1 291-505 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987440 Q87FK0_nD1 573.1.1 12-80 'Soluble domain of poliovirus core protein 3a' 'Soluble domain of poliovirus core protein 3a' 'Soluble domain of poliovirus core protein 3a' 'alpha duplicates or obligate multimers' 002987441 Q87GP7_nD2 3567.1.1 101-135 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002987442 Q87GP7_nD1 101.1.1 6-80 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987443 Q87GP7_nD3 UNASSIGNED 171-220 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987444 Q87IR0_nD1 2485.1.1 31-210 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987445 Q87PQ9_nD1 2484.1.1 6-175 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987446 Q87T92_nD1 7573.1.1 1-213 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002987447 Q87MI4_nD1 3470.1.1 6-30 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002987448 Q87I70_nD4 5054.1.1 486-520 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987449 Q87I70_nD3 7523.1.1 356-440 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987450 Q87I70_nD1 7523.1.1 26-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987451 Q87I70_nD7 225.1.1 736-890 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002987452 Q87I70_nD9 2007.1.3 976-1115 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987453 Q87I70_nD10 601.3.1 1116-1215 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002987454 Q87I70_nD6 605.1.1 666-735 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987455 Q87I70_nD5 223.1.1 531-645 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987456 Q87I70_nD8 7503.1.1 896-975 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002987457 Q87I70_nD2 7523.1.1 261-355,441-485 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987458 Q87GJ7_nD1 5074.1.1 16-45 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'extended segments' 002987459 Q87IP6_nD1 2004.1.1 1-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987460 Q87IR4_nD1 2485.1.1 41-175 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987461 Q87LL8_nD1 2003.1.11 6-110,296-330 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987462 Q87LL8_nD2 2003.1.1 111-295 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987463 Q87LL8_nD3 304.8.1 331-410 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002987464 Q87H98_nD1 5051.1.1 16-418 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002987465 Q87PT3_nD1 7097.1.1 66-100 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002987466 Q87Q55_nD1 316.1.1 46-250 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002987467 Q87R79_nD3 148.1.3 321-415 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987468 Q87R79_nD1 377.1.1 11-60 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002987469 Q87R79_nD2 2004.1.1 61-320 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987470 Q87M73_nD1 5048.1.1 6-265 'Aquaporin-like' 'Aquaporin-like' 'Aquaporin-like' 'alpha complex topology' 002987471 Q87Q73_nD1 101.1.2 6-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002987472 Q87Q73_nD2 814.1.1 71-235 'Chorismate lyase' 'Chorismate lyase' 'Chorismate lyase' 'a+b two layers' 002987473 Q87Q45_nD1 5053.1.1 16-260 'Clc chloride channel' 'Clc chloride channel' 'Clc chloride channel' 'alpha complex topology' 002987474 Q87LD4_nD1 2003.1.11 1-100,291-320 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987475 Q87LD4_nD2 2003.1.1 101-290 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987476 Q87J72_nD3 101.1.1 281-330 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987477 Q87J72_nD1 873.1.1 6-205 'H-NOX domain' 'H-NOX domain' 'H-NOX domain' 'a+b complex topology' 002987478 Q87J72_nD2 101.1.1 211-280 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987479 Q87H13_nD3 327.5.1 471-635 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987480 Q87H13_nD1 7584.1.1 1-190 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002987481 Q87H13_nD2 323.1.1 191-470 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002987482 Q87GG1_nD3 2485.1.1 336-435 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987483 Q87GG1_nD4 3254.1.1 436-525 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'alpha arrays' 002987484 Q87GG1_nD1 604.5.1 31-255 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002987485 Q87GG1_nD2 1075.4.1 271-320 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987486 Q87GG1_nD5 3255.1.1 531-625 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b three-layered sandwiches' 002987487 Q87SQ3_nD2 129.1.1 206-380 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002987488 Q87SQ3_nD1 2003.1.1 1-205 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987489 Q87QQ1_nD2 246.3.1 171-440 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002987490 Q87QQ1_nD1 11.8.1 21-165 'Osmotin-like' 'Osmotin-like' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987491 Q87L57_nD1 3567.1.1 1-80 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002987492 Q87PA5_nD3 1.1.9 406-478 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987493 Q87PA5_nD1 2003.1.5 1-315 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987494 Q87PA5_nD2 243.6.1 321-405 'Pre-PUA domain' 'Pre-PUA domain' 'Cystatin-like' 'a+b two layers' 002987495 Q87P48_nD1 3186.1.1 326-415 'C-terminal domain of FliK' 'C-terminal domain of FliK' 'C-terminal domain of FliK' 'a+b two layers' 002987496 Q87NQ1_nD3 3922.1.1 61-160 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002987497 Q87NQ1_nD1 3860.1.1 1-30 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002987498 Q87NQ1_nD2 1073.1.1 31-60 'Mitochondrial calcium uniporter (MCU)' 'Mitochondrial calcium uniporter (MCU)' 'Mitochondrial calcium uniporter (MCU)' 'alpha arrays' 002987499 Q87KK7_nD1 2003.1.1 1-150,316-333 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987500 Q87KK7_nD2 298.1.1 151-185,206-315 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002987501 Q87HB3_nD1 101.1.1 6-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987502 Q87HB3_nD2 191.1.1 71-190 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002987503 Q87RI8_nD1 2485.1.1 1-115 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987504 Q87RI8_nD2 109.4.1 116-280 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987505 Q87FU9_nD1 5085.1.1 26-260,291-520 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002987506 Q87LM4_nD1 2003.1.2 1-390 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987507 Q87H19_nD1 2003.1.5 6-200 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987508 Q87SV5_nD1 1075.3.1 6-525 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987509 Q87HA4_nD1 7579.1.1 21-305 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002987510 Q87L27_nD1 192.8.1 11-150 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002987511 Q87JR6_nD2 3479.1.1 6-25,271-295 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002987512 Q87JR6_nD5 225.1.1 536-685 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002987513 Q87JR6_nD1 223.1.1 26-270 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987514 Q87JR6_nD3 223.1.1 296-465 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987515 Q87JR6_nD4 605.1.1 466-535 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987516 Q87NY2_nD2 7515.1.1 236-645 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002987517 Q87NY2_nD1 1151.1.1 11-235 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'alpha bundles' 002987518 Q87T82_nD1 3784.1.1 51-155 'Putative lipoprotein CPF_1278-related' 'Putative lipoprotein CPF_1278-related' 'Putative lipoprotein CPF_1278-related' 'a+b two layers' 002987519 Q87TG5_nD1 2002.1.1 1-10,31-353 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987520 Q87MD4_nD1 304.102.1 1-245 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002987521 Q87M27_nD1 304.8.1 31-100 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002987522 Q87M27_nD2 2006.1.1 101-325 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002987523 Q87JY5_nD1 628.1.1 61-145 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002987524 Q87MK0_nD1 1075.4.1 21-330 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987525 Q87MK0_nD2 2485.1.1 356-440,486-505 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987526 Q87MK0_nD5 3255.1.1 596-699 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b three-layered sandwiches' 002987527 Q87MK0_nD3 3253.1.1 441-485 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'a+b two layers' 002987528 Q87MK0_nD4 3254.1.1 506-595 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'alpha arrays' 002987529 Q87QF2_nD1 604.39.1 31-210 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002987530 Q87SL3_nD1 1197.1.1 6-195 'Integral membrane glycerol 3-phosphate acyltransferase PlsY' 'Integral membrane glycerol 3-phosphate acyltransferase PlsY' 'Integral membrane glycerol 3-phosphate acyltransferase PlsY' 'alpha bundles' 002987531 Q87GZ8_nD1 109.37.1 6-315 'Anion channel SLAC1-related' 'Anion channel SLAC1-related' 'Repetitive alpha hairpins' 'alpha superhelices' 002987532 Q87M98_nD1 11.1.4 6-140 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987533 Q87RR8_nD1 101.1.4 6-50 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002987534 Q87RR8_nD2 2007.1.2 51-155,281-310 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987535 Q87RR8_nD3 2007.1.2 156-280 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987536 Q87QU7_nD3 101.1.2 261-330 'winged' 'HTH' 'HTH' 'alpha arrays' 002987537 Q87QU7_nD2 148.1.3 186-260 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987538 Q87QU7_nD1 2004.1.1 16-185 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987539 Q87S87_nD1 7588.1.1 1-95 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'a/b three-layered sandwiches' 002987540 Q87S87_nD2 7588.1.1 96-200 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'a/b three-layered sandwiches' 002987541 Q87S87_nD3 7588.1.1 201-310 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'a/b three-layered sandwiches' 002987542 Q87LC2_nD1 3755.4.1 36-60 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'YscO-like' 'alpha bundles' 002987543 Q87LC2_nD2 1.1.5 61-280 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987544 Q87T97_nD1 2004.1.1 1-275 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987545 Q87QU1_nD1 2484.6.1 46-145 'Periplasmic domain of ExbD/TolR' 'Periplasmic domain of ExbD/TolR' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987546 Q87MY8_nD1 2004.1.1 1-320 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987547 Q87LV8_nD1 192.10.1 6-148 'DnaK suppressor protein DksA, alpha-hairpin domain' 'DnaK suppressor protein DksA, alpha-hairpin domain' 'Long alpha-hairpin' 'alpha bundles' 002987548 Q87FK9_nD1 2002.1.1 6-345,376-663 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987549 Q87P57_nD1 213.1.1 1-130 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987550 Q87SF6_nD1 221.4.1 1-130 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002987551 Q87Q43_nD1 7525.1.1 1-204 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'a/b three-layered sandwiches' 002987552 Q87G91_nD1 2486.1.1 41-240 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002987553 Q87ND7_nD1 109.4.1 6-30,56-230 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987554 Q87K79_nD1 5084.5.1 36-445 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002987555 Q87ME5_nD6 5084.5.1 426-804 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002987556 Q87ME5_nD1 3121.1.1 26-90 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002987557 Q87ME5_nD5 3121.1.1 346-420 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002987558 Q87ME5_nD2 3121.1.1 91-175 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002987559 Q87ME5_nD4 3121.1.1 266-345 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002987560 Q87ME5_nD3 3121.1.1 176-265 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002987561 Q87P28_nD1 327.16.1 21-80 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987562 Q87P28_nD2 327.13.1 81-200 'Ring-building motif I in type III secretion system' 'Ring-building motif I in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987563 Q87P28_nD3 3598.1.1 216-240 'Cellulose Synthase Subunit B a/b domain' 'Cellulose Synthase Subunit B a/b domain' 'Cellulose Synthase Subunit B a/b domain' 'a/b three-layered sandwiches' 002987564 Q87MD8_nD1 2007.6.1 1-235 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987565 Q79YV5_nD1 7573.1.1 1-175 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002987566 Q87N98_nD1 101.1.1 16-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987567 Q87LG4_nD1 213.1.1 6-170 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987568 Q87FY0_nD1 866.1.1 26-185 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002987569 Q87FY0_nD2 1.1.10 196-265 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987570 Q87LI4_nD1 312.2.1 46-200 'Lytic transglycosylase MltC N-terminal domain' 'Lytic transglycosylase MltC N-terminal domain' 'HIT-like' 'a+b three layers' 002987571 Q87LI4_nD2 235.1.1 201-375 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002987572 Q87FE1_nD1 2007.2.1 1-195 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987573 Q87KV8_nD3 217.2.1 501-570 'CorC/HlyC domain-like' 'CorC/HlyC domain-like' 'FAD-binding domain-like' 'a+b complex topology' 002987574 Q87KV8_nD1 3236.1.1 6-395 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002987575 Q87KV8_nD2 4261.1.1 406-485 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002987576 Q87HM2_nD1 103.2.1 1-95 'ATP cone' 'ATP cone' 'RuvA-C' 'alpha arrays' 002987577 Q87HM2_nD2 2500.1.1 96-240,261-685 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'a/b barrels' 002987578 Q87M84_nD2 2008.1.1 911-1210 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002987579 Q87M84_nD1 2004.1.1 16-910 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987580 Q87IH0_nD1 2004.1.1 6-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987581 Q87PJ6_nD2 2492.1.1 96-265 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002987582 Q87PJ6_nD1 221.10.1 36-95 'FdhD/NarQ beta-grasp fold domain' 'FdhD/NarQ beta-grasp fold domain' 'beta-Grasp' 'a+b two layers' 002987583 Q87RV7_nD1 2011.1.1 11-245 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002987584 Q87RV7_nD2 325.1.7 246-335 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987585 Q87JA9_nD1 304.28.1 46-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987586 Q87JA9_nD4 5067.1.1 6-45,326-495 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002987587 Q87JA9_nD3 304.28.1 136-180,271-325 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987588 Q87JA9_nD8 5067.1.1 501-555,856-1030 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002987589 Q87JA9_nD5 304.28.1 561-660 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987590 Q87JA9_nD2 304.28.2 181-270 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987591 Q87JA9_nD6 304.28.2 706-795 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987592 Q87JA9_nD7 304.28.1 661-705,796-855 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987593 Q87LY5_nD1 325.1.7 81-115,176-210 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987594 Q87LY5_nD2 5086.1.1 116-175 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987595 Q87LY5_nD3 1.1.7 66-80,211-285 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987596 Q87LY5_nD4 1.1.7 47-65,286-360 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987597 Q87I12_nD2 7523.1.1 96-165,276-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987598 Q87I12_nD1 101.1.2 6-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002987599 Q87I12_nD3 7523.1.1 151-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987600 Q87I30_nD1 159.1.1 1-129 'Hypothetical protein AF_0060' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002987601 Q87Q84_nD3 650.1.1 261-320 'Chaperone J-domain' 'Chaperone J-domain' 'Chaperone J-domain' 'alpha bundles' 002987602 Q87Q84_nD1 109.4.1 26-150 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987603 Q87Q84_nD2 3567.1.1 226-260 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002987604 Q56696_nD3 10.1.2 586-695 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002987605 Q56696_nD4 10.1.2 706-815 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002987606 Q56696_nD1 109.4.1 1-305 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987607 Q56696_nD2 2498.1.1 306-570 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002987608 Q87HY6_nD1 7523.1.1 31-125,221-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987609 Q87HY6_nD2 7523.1.1 126-220 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987610 Q87KP0_nD1 2005.1.1 6-220 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002987611 Q87MX4_nD1 3921.1.1 6-190 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'alpha complex topology' 002987612 Q87FY5_nD2 531.1.1 101-330 'C-terminal domain of FliG' 'C-terminal domain of FliG' 'Domains of FliG' 'alpha arrays' 002987613 Q87FY5_nD1 531.3.1 11-75 'N-terminal domain of FliG' 'N-terminal domain of FliG' 'Domains of FliG' 'alpha arrays' 002987614 Q87JJ3_nD2 129.1.1 36-238 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002987615 Q87JJ3_nD1 3860.1.1 11-35 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002987616 Q87M81_nD1 109.37.1 1-320 'Anion channel SLAC1-related' 'Anion channel SLAC1-related' 'Repetitive alpha hairpins' 'alpha superhelices' 002987617 Q87JH2_nD1 708.1.2 1-133 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002987618 Q87GW1_nD1 7581.1.1 1-270 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002987619 Q87GW1_nD2 7581.1.1 271-400 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002987620 Q87M32_nD1 825.1.1 21-69 'Aerolysin family of pore-forming toxins' 'Aerolysin family of pore-forming toxins' 'Aerolysin family of pore-forming toxins' 'beta complex topology' 002987621 Q87TP2_nD2 7523.1.1 111-185,291-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987622 Q87TP2_nD1 101.1.2 21-105 'winged' 'HTH' 'HTH' 'alpha arrays' 002987623 Q87TP2_nD3 7523.1.1 186-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987624 Q87JZ1_nD2 7523.1.1 96-310 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987625 Q87JZ1_nD1 101.1.2 1-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002987626 Q87I85_nD3 327.16.1 151-175 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987627 Q87I85_nD4 327.16.1 191-415 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987628 Q87I85_nD2 3261.1.1 96-150,176-185 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002987629 Q87I85_nD1 11.1.1 26-95 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987630 Q87R71_nD1 7577.1.1 6-15,36-300 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002987631 Q87R71_nD2 3016.1.1 301-404 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002987632 Q87KQ9_nD1 109.4.1 26-245 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987633 Q87J60_nD1 7516.1.1 31-420 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002987634 Q87MB1_nD2 230.4.1 211-334 'ApbE-like' 'ApbE-like' 'T-fold' 'a+b two layers' 002987635 Q87MB1_nD1 230.4.1 26-205 'ApbE-like' 'ApbE-like' 'T-fold' 'a+b two layers' 002987636 Q87TH9_nD2 3396.1.1 41-65 'HIG1 domain family member 1A' 'HIG1 domain family member 1A' 'HIG1 domain family member 1A' 'extended segments' 002987637 Q87TH9_nD1 148.1.3 6-40 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987638 Q87PZ3_nD2 5084.3.1 226-260 'Autotransporter' 'Autotransporter' 'Outer membrane meander beta-barrels' 'beta barrels' 002987639 Q87PZ3_nD1 UNASSIGNED 26-225,261-300 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987640 Q87N37_nD3 2484.1.1 206-375 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987641 Q87N37_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002987642 Q87N37_nD2 2484.1.1 81-205,376-405 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987643 P46231_nD1 3355.1.1 6-440 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002987644 P19250_nD1 11.8.1 36-189 'Osmotin-like' 'Osmotin-like' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987645 Q87JG5_nD1 11.13.1 26-323 'Leukocidin-like' 'Leukocidin-like' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987646 Q87SI5_nD1 2490.2.1 1-140 'Ribosomal protein L13 and L16-A' 'Ribosomal protein L13 and L16-A' 'Ribosomal protein L13/L15p/L18e/L32e' 'a/b three-layered sandwiches' 002987647 Q87NN8_nD1 4312.1.1 1-85 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002987648 Q87MJ5_nD1 3718.1.1 1-95 'Flagellar protein fliT' 'Flagellar protein fliT' 'Flagellar protein fliT' 'alpha bundles' 002987649 Q87MQ8_nD1 298.3.1 21-160 'Serine dehydratase beta chain-like' 'Serine dehydratase beta chain-like' 'FwdE/GAPDH domain-like' 'a+b two layers' 002987650 Q87MQ8_nD2 4021.1.1 176-425 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha arrays' 002987651 Q87PA6_nD5 1.1.16 521-640 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987652 Q87PA6_nD2 1.1.16 161-280 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987653 Q87PA6_nD6 1.1.16 641-745 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987654 Q87PA6_nD1 1.1.16 46-155 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987655 Q87PA6_nD4 1.1.16 396-465,486-515 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987656 Q87PA6_nD7 1.1.16 751-875 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987657 Q87PA6_nD3 1.1.16 281-395 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987658 Q87FX5_nD2 5054.1.1 11-50,96-240 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987659 Q87FX5_nD1 5041.1.1 51-95 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002987660 Q87FX5_nD3 4104.1.1 241-350 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'beta sandwiches' 002987661 Q87M11_nD1 2002.1.1 1-330 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987662 Q87HX1_nD1 2003.6.1 1-430 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002987663 Q87GM7_nD1 2007.1.19 6-280 'FabD/lysophospholipase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987664 Q87IP3_nD1 150.1.1 1-159 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002987665 Q87NA7_nD4 605.1.1 471-525 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987666 Q87NA7_nD3 223.1.1 246-260,306-470 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987667 Q87NA7_nD5 225.1.1 531-685 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002987668 Q87NA7_nD2 605.1.1 261-305 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987669 Q87NA7_nD1 5001.1.1 1-245 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002987670 Q87NA7_nD6 2007.1.3 716-835 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987671 Q87SP2_nD2 186.1.1 101-220 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002987672 Q87SP2_nD1 252.2.1 1-100 'GCC-box binding domain-like' 'GCC-box binding domain-like' 'DNA-binding domain' 'a+b two layers' 002987673 Q87SP2_nD4 101.1.8 361-420 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002987674 Q87SP2_nD3 101.1.8 221-360 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002987675 Q87IS4_nD1 1079.1.1 1-210 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002987676 Q87MV9_nD1 5050.1.1 6-205 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987677 Q87GR0_nD2 192.2.1 256-310 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002987678 Q87GR0_nD5 601.7.1 651-770 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002987679 Q87GR0_nD1 5086.1.1 151-220,416-455 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987680 Q87GR0_nD3 192.8.1 231-250,311-415 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002987681 Q87GR0_nD4 2004.1.1 1-150,456-650 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987682 Q87FG7_nD1 10.12.1 1-149 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987683 Q87SK1_nD1 5041.1.1 31-110 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002987684 Q87SK1_nD2 4168.1.1 111-165 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002987685 Q87SK1_nD4 3291.1.1 166-235,361-435 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002987686 Q87SK1_nD3 UNASSIGNED 236-360 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987687 Q87N70_nD1 2485.1.1 36-170 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987688 Q87TB0_nD1 152.1.2 6-90 'RNA polymerase omega subunit' 'RPB6/omega subunit-like' 'RPB6/omega subunit-like' 'alpha arrays' 002987689 Q87HE5_nD1 2004.1.1 1-174 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987690 Q87P79_nD1 2002.1.1 1-220 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987691 Q87N36_nD3 7518.1.1 346-480 'PK C-terminal domain-like' 'PK C-terminal domain-like' 'PK C-terminal domain-like' 'a/b three-layered sandwiches' 002987692 Q87N36_nD1 1.1.15 76-170 'PK beta-barrel domain-like' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987693 Q87N36_nD2 2002.1.1 6-75,171-345 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987694 Q87KZ8_nD1 3355.1.1 6-75,101-470 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002987695 Q87LE5_nD1 3523.1.1 41-180 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'beta meanders' 002987696 Q87PN6_nD1 1075.5.1 16-220 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987697 Q87PN6_nD2 1075.5.1 241-490 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987698 Q87RU7_nD1 2492.1.1 11-155 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002987699 Q87RU7_nD2 7501.1.1 156-370 'Dihydrofolate reductases' 'Dihydrofolate reductases' 'Dihydrofolate reductases' 'a/b three-layered sandwiches' 002987700 Q87RS9_nD1 3623.1.1 1-110 'Uncharacterized protein VC_0899' 'Uncharacterized protein VC_0899' 'Uncharacterized protein VC_0899' 'a+b two layers' 002987701 Q87RS9_nD2 7563.1.1 111-450 'MCP/YpsA-related' 'MCP/YpsA-related' 'MCP/YpsA-related' 'a/b three-layered sandwiches' 002987702 Q87R74_nD1 2488.1.1 6-195 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002987703 Q87GG6_nD1 UNASSIGNED 21-210 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987704 Q87GX5_nD3 304.28.1 136-185,276-330 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987705 Q87GX5_nD4 5067.1.1 1-35,331-510 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002987706 Q87GX5_nD1 304.28.1 41-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987707 Q87GX5_nD7 304.28.1 676-725,811-870 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987708 Q87GX5_nD2 304.28.2 186-275 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987709 Q87GX5_nD5 304.28.1 561-675 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987710 Q87GX5_nD8 5067.1.1 511-560,871-1045 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002987711 Q87GX5_nD6 304.28.2 726-810 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002987712 Q87LU8_nD1 1075.1.1 1-255 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987713 Q87IU0_nD1 5.1.3 51-209 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002987714 Q87L98_nD2 3016.1.1 306-373 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002987715 Q87L98_nD1 7577.1.1 1-305 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002987716 Q87N52_nD1 2003.1.1 1-335 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987717 Q87LM8_nD2 1.1.8 236-320 'Aminomethyltransferase beta-barrel domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987718 Q87LM8_nD1 304.107.1 6-230 'Aminomethyltransferase folate-binding domain' 'Aminomethyltransferase folate-binding domain' 'Alpha-beta plaits' 'a+b two layers' 002987719 Q87L65_nD1 3454.1.1 86-170 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002987720 Q87SU3_nD1 325.1.8 6-85 'Ribosomal L27 protein' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987721 Q87GD3_nD1 3718.1.1 1-25,66-105 'Flagellar protein fliT' 'Flagellar protein fliT' 'Flagellar protein fliT' 'alpha bundles' 002987722 Q87NC8_nD2 1.1.7 246-370 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987723 Q87NC8_nD1 2002.1.1 1-245 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987724 Q87KK9_nD1 5050.1.1 1-205 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987725 Q87KK9_nD2 5050.1.1 206-400 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987726 Q87KR7_nD2 101.1.8 161-285,316-355 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002987727 Q87KR7_nD1 186.1.1 21-155 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002987728 Q87KR7_nD3 101.1.8 356-410 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002987729 Q87KR7_nD4 192.17.1 446-525 'Rabenosyn-5 Rab-binding domain-like' 'Rabenosyn-5 Rab-binding domain-like' 'Long alpha-hairpin' 'alpha bundles' 002987730 Q87N01_nD1 2002.1.1 1-320 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987731 Q87K55_nD1 174.1.1 16-140 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'few secondary structure elements' 002987732 Q87HC0_nD3 109.26.1 456-505 'Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains' 'Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002987733 Q87HC0_nD2 109.4.1 146-455 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987734 Q87HC0_nD1 2007.1.3 1-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987735 Q87R81_nD1 306.7.1 1-115 'Trigger factor ribosome-binding domain' 'Trigger factor ribosome-binding domain' 'Glucose permease domain IIB-like' 'a+b two layers' 002987736 Q87R81_nD2 284.1.1 121-245 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002987737 Q87R81_nD3 589.1.2 266-430 'TF C-terminus (Pfam 05698)' 'Triger factor/SurA peptide-binding domain-like' 'Triger factor/SurA peptide-binding domain-like' 'alpha arrays' 002987738 Q87KM7_nD1 230.5.1 31-135 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002987739 Q87QR6_nD3 2008.1.1 886-1120 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002987740 Q87QR6_nD2 2004.1.1 186-885 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987741 Q87QR6_nD1 2498.1.1 6-180 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002987742 Q87ST4_nD1 589.1.1 21-160,391-425 'Porin chaperone SurA, peptide-binding domain' 'Triger factor/SurA peptide-binding domain-like' 'Triger factor/SurA peptide-binding domain-like' 'alpha arrays' 002987743 Q87ST4_nD2 284.1.1 166-270 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002987744 Q87ST4_nD3 284.1.1 276-380 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002987745 Q87NE7_nD1 7580.1.1 1-195 'RibA-like' 'RibA-like' 'RibA-like' 'a/b three-layered sandwiches' 002987746 Q87P95_nD1 2004.1.1 6-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987747 Q8GRF5_nD1 310.2.1 1-180 'Ribosome recycling factor, RRF' 'Ribosome recycling factor, RRF' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002987748 Q87N18_nD1 375.1.1 21-55 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002987749 Q87M24_nD2 7515.1.1 1-115,236-405 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002987750 Q87M24_nD1 4344.1.1 116-235 'DeoB insert domain-like' 'DeoB insert domain-like' 'DeoB insert domain-like' 'a+b three layers' 002987751 Q87IJ1_nD1 2002.1.1 1-300 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987752 Q87SK4_nD1 604.5.1 16-228 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002987753 Q87NL8_nD1 213.1.1 1-135 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987754 Q87SP5_nD3 101.1.1 181-230 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987755 Q87SP5_nD1 10.12.1 6-130 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987756 Q87SP5_nD2 101.1.1 131-180 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987757 Q87SI7_nD1 2004.1.1 1-40,61-365 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987758 Q87T17_nD1 3430.1.1 6-110 'Primosome assembly protein PriA 3' DNA-binding domain' 'Primosome assembly protein PriA 3' DNA-binding domain' 'Primosome assembly protein PriA 3' DNA-binding domain' 'a+b complex topology' 002987759 Q87T17_nD2 101.1.2 116-180 'winged' 'HTH' 'HTH' 'alpha arrays' 002987760 Q87T17_nD5 304.44.1 636-730 'Ribosomal protein S10' 'Ribosomal protein S10' 'Alpha-beta plaits' 'a+b two layers' 002987761 Q87T17_nD3 2004.1.1 181-385 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987762 Q87T17_nD4 375.1.1 386-615 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002987763 Q87GL9_nD1 4019.1.1 61-175 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002987764 Q87GL9_nD2 223.3.1 21-60,176-280 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002987765 Q87GL9_nD3 51.1.1 281-385 'Penicillin-binding protein associated domain' 'Penicillin-binding protein associated domain' 'Penicillin-binding protein associated domain' 'beta sandwiches' 002987766 Q87P44_nD1 1075.4.1 11-245 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987767 Q87FG3_nD1 5086.1.1 1-235 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987768 Q87KI1_nD1 221.1.1 1-89 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002987769 Q87M04_nD2 1.1.9 251-310 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987770 Q87M04_nD1 304.102.1 6-250 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002987771 Q87L55_nD1 2003.1.1 1-150,311-334 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987772 Q87L55_nD2 298.1.1 151-310 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002987773 Q87IC6_nD1 7515.1.1 26-495 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002987774 Q87GV0_nD1 5059.1.1 6-300 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002987775 Q87JH0_nD1 11.1.4 51-154 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987776 Q87J92_nD1 191.1.1 6-80 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002987777 Q87IE3_nD1 10.12.1 76-260 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987778 Q87IE3_nD2 101.1.1 261-320 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987779 Q87IE3_nD3 101.1.1 321-360 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987780 Q87M72_nD1 2484.1.1 1-500 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987781 Q87QG9_nD1 4990.1.1 31-185,206-280 'Lipase chaperone LifO-like' 'Lipase chaperone LifO-like' 'Lipase chaperone LifO-like' 'alpha arrays' 002987782 P59620_nD3 4953.1.1 351-435 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002987783 P59620_nD4 213.1.1 461-624 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987784 P59620_nD1 4952.1.1 1-105 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'alpha arrays' 002987785 P59620_nD2 602.1.1 106-350,441-460 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'alpha arrays' 002987786 Q87L77_nD1 507.1.1 11-170,191-460 'DnaB helicase N-terminal domain-related' 'DnaB helicase N-terminal domain-related' 'DnaB helicase N-terminal domain-related' 'alpha arrays' 002987787 Q87I33_nD1 2002.1.1 1-365 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987788 Q87PI8_nD1 205.1.1 1-180 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002987789 Q87RW9_nD1 274.1.1 46-185 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002987790 Q87NZ9_nD2 304.8.1 321-395 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002987791 Q87NZ9_nD1 7531.1.1 1-305 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002987792 Q87NZ9_nD3 304.8.1 396-460 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002987793 Q87TF4_nD1 2002.1.1 11-370,451-460 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987794 Q87TF4_nD2 101.19.1 371-450 'C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN' 'C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN' 'HTH' 'alpha arrays' 002987795 Q87TN7_nD1 5054.1.1 1-155 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987796 Q87TN7_nD2 5054.1.1 156-260 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987797 Q87TN7_nD4 5054.1.1 391-480 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987798 Q87TN7_nD3 5054.1.1 261-385 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002987799 Q87HI4_nD2 5084.5.3 166-500,521-725 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002987800 Q87HI4_nD1 3070.2.1 26-165 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002987801 Q87KI8_nD1 2007.1.8 41-155 'Uroporphyrinogen III synthase (U3S, HemD)' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987802 Q87KI8_nD2 2007.1.8 1-35,156-240 'Uroporphyrinogen III synthase (U3S, HemD)' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987803 Q87HB0_nD5 101.32.1 486-540 'bacterioferritin-associated ferredoxin' 'bacterioferritin-associated ferredoxin' 'HTH' 'alpha arrays' 002987804 Q87HB0_nD2 2003.1.2 121-255 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987805 Q87HB0_nD1 2003.1.2 11-120,256-325 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987806 Q87HB0_nD6 304.37.1 541-635,796-835 'Sulfite reductase, domains 1 and 3' 'Sulfite reductase, domains 1 and 3' 'Alpha-beta plaits' 'a+b two layers' 002987807 Q87HB0_nD4 101.32.1 426-480 'bacterioferritin-associated ferredoxin' 'bacterioferritin-associated ferredoxin' 'HTH' 'alpha arrays' 002987808 Q87HB0_nD7 296.1.1 636-790 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'a+b three layers' 002987809 Q87HB0_nD3 244.2.1 326-425 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002987810 Q87QF6_nD1 3883.1.1 1-203 'CDP-alcohol phosphotransferase helical bundle domain' 'CDP-alcohol phosphotransferase helical bundle domain' 'CDP-alcohol phosphotransferase helical bundle domain' 'alpha bundles' 002987811 Q87KS8_nD1 2003.1.10 1-100 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987812 Q87KS8_nD2 206.1.3 101-325 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002987813 Q87KS8_nD3 325.1.1 291-305,326-425 'CO dehydrogenase molybdoprotein N-domain-like' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987814 Q87NL7_nD1 2004.1.1 16-175,201-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987815 Q87HP1_nD1 2003.1.11 1-140,321-390 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987816 Q87HP1_nD2 2003.1.1 141-320 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987817 Q87HP1_nD3 3892.1.1 406-515 'Transhydrogeanse domain II' 'Transhydrogeanse domain II' 'Transhydrogeanse domain II' 'alpha bundles' 002987818 Q87KB3_nD2 5050.1.1 186-390 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987819 Q87KB3_nD1 5050.1.1 1-185 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987820 Q87J37_nD1 2004.1.1 16-65 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987821 Q87J37_nD2 7558.1.1 66-369 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002987822 Q87PH0_nD2 10.1.2 116-215 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002987823 Q87PH0_nD1 243.4.1 21-115 'DsbC/DsbG N-terminal domain-like' 'DsbC/DsbG N-terminal domain-like' 'Cystatin-like' 'a+b two layers' 002987824 Q87NP1_nD1 213.1.1 6-180 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002987825 Q87GR6_nD1 7579.1.1 1-205 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002987826 Q87HU1_nD1 1174.1.1 6-190 'Potassium channel TMEM175' 'Potassium channel TMEM175' 'Potassium channel TMEM175' 'alpha complex topology' 002987827 Q87QE5_nD1 377.1.2 32-60 'PARP-type zinc finger' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002987828 Q87RU9_nD1 7524.1.1 1-415 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002987829 Q87KM4_nD2 101.1.1 121-180 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987830 Q87KM4_nD1 142.1.1 16-120 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002987831 Q87KM4_nD3 101.1.1 206-285 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987832 Q87PH6_nD2 7523.1.1 146-265,331-355 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987833 Q87PH6_nD1 7523.1.1 31-145,266-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987834 Q87L80_nD1 846.1.1 1-139 'YjbQ-like (Pfam 01894)' 'YjbQ-like (Pfam 01894)' 'YjbQ-like (Pfam 01894)' 'a+b two layers' 002987835 Q87MF8_nD2 101.1.10 6-55,81-225 'Cyclin-like' 'HTH' 'HTH' 'alpha arrays' 002987836 Q87MF8_nD1 148.1.3 56-80 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987837 Q87NA1_nD2 2002.1.1 386-755 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987838 Q87NA1_nD1 2002.1.1 1-385 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987839 Q87FI8_nD2 4177.1.1 61-220 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002987840 Q87FI8_nD1 5059.1.1 31-60 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002987841 Q87FF8_nD1 220.1.1 61-140 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002987842 Q87IR7_nD1 5039.1.1 16-294 'Cytochrome c oxidase subunit III-like' 'Cytochrome c oxidase subunit III-like' 'Cytochrome c oxidase subunit III-like' 'alpha bundles' 002987843 Q87T85_nD1 4232.1.1 1-10,31-75 'Ribosomal protein L28' 'Ribosomal protein bL28-related' 'Ribosomal protein bL28-related' 'few secondary structure elements' 002987844 Q87KG7_nD1 3538.1.1 6-219 'MerF' 'MerF' 'MerF' 'extended segments' 002987845 Q87G79_nD2 5065.1.1 341-655 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002987846 Q87G79_nD1 5065.1.1 6-320 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002987847 Q87NI2_nD1 4267.1.1 11-90 'YefM-like' 'YefM-like' 'YefM-like' 'a+b duplicates or obligate multimers' 002987848 Q87NZ5_nD1 5051.1.1 41-553 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002987849 Q87QS0_nD4 209.1.2 411-624 'Sulfatase-modifying factor-like' 'C-type lectin-like' 'C-type lectin-like' 'a+b complex topology' 002987850 Q87QS0_nD3 327.11.2 106-115,351-410 'Eukaryotic type KH-domain (KH-domain type I)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002987851 Q87QS0_nD1 4312.1.1 6-79,116-125,301-325 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002987852 Q87QS0_nD2 138.1.1 141-195,222-240,276-300 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'alpha arrays' 002987853 Q87FE3_nD3 2004.1.1 451-704 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987854 Q87FE3_nD2 1075.4.1 131-450 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002987855 Q87FE3_nD1 219.1.1 1-125 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002987856 Q87J15_nD1 2484.1.1 16-160 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987857 Q87H90_nD5 225.1.1 286-413 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002987858 Q87H90_nD2 223.1.1 51-130 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987859 Q87H90_nD1 5043.2.1 16-50,136-160 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002987860 Q87H90_nD4 605.1.1 231-280 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002987861 Q87H90_nD3 4168.1.1 161-230 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002987862 Q87KW2_nD2 602.1.1 151-405 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'alpha arrays' 002987863 Q87KW2_nD1 4952.1.1 16-150 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'alpha arrays' 002987864 Q87KW2_nD3 4953.1.1 406-475 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002987865 Q87FH1_nD1 2002.1.1 1-209 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987866 Q87RY2_nD1 2.21.1 12-135 'Small protein B (SmpB)' 'Small protein B (SmpB)' 'OB-fold' 'beta barrels' 002987867 Q87KL3_nD1 601.7.1 6-85 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002987868 Q87MK2_nD1 2004.1.1 11-290 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987869 Q87ND1_nD2 304.162.1 176-250 'Competence or damage-inducible protein CinA middle domain' 'Competence or damage-inducible protein CinA middle domain' 'Alpha-beta plaits' 'a+b two layers' 002987870 Q87ND1_nD1 7541.1.1 1-170 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'a/b three-layered sandwiches' 002987871 Q87ND1_nD3 7520.1.1 251-400 'CinA-like' 'CinA-like' 'CinA-like' 'a/b three-layered sandwiches' 002987872 Q87NU8_nD2 5104.1.1 196-315 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'a+b three layers' 002987873 Q87NU8_nD1 2006.1.2 1-195 'DHH phosphoesterases' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002987874 Q87FZ9_nD1 150.1.1 1-155 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002987875 Q87RF2_nD1 2003.1.2 6-235,356-450 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987876 Q87RF2_nD2 278.1.1 236-355 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'a+b complex topology' 002987877 Q87RF2_nD3 604.2.1 451-570 'Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain' 'Spectrin repeat-like' 'alpha bundles' 002987878 Q87GI8_nD2 206.1.1 76-265 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002987879 Q87GI8_nD1 109.4.1 21-75 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987880 Q87LC8_nD2 3053.1.1 241-480 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'beta barrels' 002987881 Q87LC8_nD1 512.1.1 6-240 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b two layers' 002987882 Q87GK6_nD1 10.12.1 6-190 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987883 Q87N60_nD1 107.1.1 26-100 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002987884 Q87N60_nD2 107.1.1 101-203 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002987885 Q87NE2_nD2 5069.1.1 211-320 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002987886 Q87NE2_nD1 5069.1.1 6-210 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002987887 Q87JY6_nD1 2498.1.1 6-575 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002987888 Q87JY6_nD2 109.4.1 576-615 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987889 Q87KK6_nD1 101.1.2 1-105 'winged' 'HTH' 'HTH' 'alpha arrays' 002987890 Q87IS5_nD1 10.12.1 11-175 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002987891 Q87IS5_nD2 101.1.1 176-275 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987892 Q87J59_nD3 5086.1.1 106-225 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987893 Q87J59_nD4 1.1.7 56-70,261-345 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987894 Q87J59_nD2 325.1.7 71-105,226-260 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002987895 Q87J59_nD1 1.1.7 31-55 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987896 Q87IE2_nD2 5084.5.3 46-60,151-668 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002987897 Q87IE2_nD1 3070.2.1 31-150 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002987898 Q87FS9_nD1 2007.1.19 1-275 'FabD/lysophospholipase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987899 Q87MW3_nD2 228.1.1 91-199 'Fe,Mn superoxide dismutase (SOD)-C' 'Fe,Mn superoxide dismutase (SOD)-C' 'Fe,Mn superoxide dismutase (SOD)-C' 'a+b three layers' 002987900 Q87MW3_nD1 192.3.1 6-90 'Fe,Mn superoxide dismutase (SOD), N-terminal domain' 'Fe,Mn superoxide dismutase (SOD), N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002987901 Q87IC1_nD2 148.1.3 221-325 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987902 Q87IC1_nD1 2004.1.1 6-220 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987903 Q87JJ1_nD1 221.4.1 6-170 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002987904 Q87IV8_nD3 7523.1.1 111-135,256-355,556-585 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987905 Q87IV8_nD4 7523.1.1 356-555 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002987906 Q87IV8_nD1 101.1.2 6-110 'winged' 'HTH' 'HTH' 'alpha arrays' 002987907 Q87IV8_nD2 304.136.1 136-255 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002987908 Q87IV1_nD1 2002.1.1 1-245 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987909 Q87HX2_nD1 2004.1.1 1-150,171-580 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987910 Q87I11_nD1 2486.1.1 26-280 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002987911 Q87NY5_nD1 109.4.1 6-190 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987912 Q87HC2_nD3 165.3.1 331-375 'Phenylalanine zipper' 'Phenylalanine zipper' 'Dimerisation interlock' 'alpha duplicates or obligate multimers' 002987913 Q87HC2_nD2 5086.1.1 206-330,381-398 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002987914 Q87HC2_nD1 73.1.1 1-110 'SMAD/FHA domain' 'SMAD/FHA domain' 'SMAD/FHA domain' 'beta sandwiches' 002987915 Q87S88_nD1 284.1.1 1-70,131-143 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002987916 Q87S88_nD2 284.4.1 71-130 'Archaeal FKBP insertion domain' 'Archaeal FKBP insertion domain' 'FKBP-like' 'a+b two layers' 002987917 Q87JK3_nD1 2011.1.1 31-400 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002987918 Q87SH0_nD2 3702.1.1 71-115,186-230,251-260 'Penicillin binding protein dimerisation domain' 'Penicillin binding protein dimerisation domain' 'Penicillin binding protein dimerisation domain' 'beta complex topology' 002987919 Q87SH0_nD1 308.2.1 116-185 'Penicillin binding protein ClpS-like domain' 'Penicillin binding protein ClpS-like domain' 'ClpS-like' 'a+b two layers' 002987920 Q87SH0_nD3 223.3.1 261-590 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002987921 Q87HN7_nD1 5084.3.1 26-325 'Autotransporter' 'Autotransporter' 'Outer membrane meander beta-barrels' 'beta barrels' 002987922 Q87GJ2_nD1 2002.5.1 1-230 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002987923 Q87MH3_nD1 872.9.1 21-115 'Flagella basal-body protein flgT N-terminal domain' 'Flagella basal-body protein flgT N-terminal domain' 'Dodecin subunit-like' 'a+b two layers' 002987924 Q87MH3_nD2 7503.1.1 116-250 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002987925 Q87MH3_nD3 304.4.1 261-325 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002987926 Q87HH3_nD3 11.1.1 431-570 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987927 Q87HH3_nD4 11.1.1 571-725 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987928 Q87HH3_nD1 11.1.1 41-255 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987929 Q87HH3_nD2 11.1.1 256-430 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987930 Q87HH3_nD5 11.1.1 736-870 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987931 Q87KV5_nD2 11.1.1 36-155 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987932 Q87KV5_nD1 6106.1.1 6-30 'Photosystem II protein Y, psbY' 'Photosystem II protein Y, psbY' 'Photosystem II protein Y, psbY' 'extended segments' 002987933 Q87FL0_nD1 331.5.1 21-113 'TT1751-like' 'TT1751-like' 'TBP-like' 'a+b two layers' 002987934 Q87JM7_nD1 62.1.1 21-239 'Carbonic anhydrase' 'Carbonic anhydrase' 'Carbonic anhydrase' 'beta meanders' 002987935 Q87T18_nD3 2007.1.2 161-290,321-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987936 Q87T18_nD2 2007.1.2 46-160,291-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002987937 Q87T18_nD1 101.1.4 1-45 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002987938 Q87LS7_nD2 101.1.1 91-440 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987939 Q87LS7_nD1 181.1.1 1-90 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G proteins-like' 'alpha bundles' 002987940 Q87IS6_nD2 3542.1.1 171-235 'Presenilin family intramembrane aspartate proteases' 'Presenilin family intramembrane aspartate proteases' 'Presenilin family intramembrane aspartate proteases' 'alpha arrays' 002987941 Q87IS6_nD1 5050.1.1 11-170 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987942 Q87LP3_nD1 301.8.1 1-125 '4'-phosphopantetheinyl transferase' '4'-phosphopantetheinyl transferase' 'Bacillus chorismate mutase-like' 'a+b three layers' 002987943 Q87RI2_nD1 5076.2.1 6-60 'Putative sulfate permease CysZ' 'Putative sulfate permease CysZ' 'Mitochondrial ADP/ATP carrier-like' 'alpha complex topology' 002987944 Q87RI2_nD2 3950.1.1 61-250 'Bacterial vitamin C transporter UlaA/SgaT' 'Bacterial vitamin C transporter UlaA/SgaT' 'Bacterial vitamin C transporter UlaA/SgaT' 'alpha complex topology' 002987945 Q87RC9_nD1 2.1.1 26-145 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002987946 Q87Q26_nD1 2003.1.5 46-260,286-375 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002987947 Q87IT2_nD2 2485.1.1 91-195 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987948 Q87IT2_nD1 2485.1.1 1-90 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002987949 Q87SS9_nD1 7542.1.1 1-160 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002987950 Q87SS9_nD2 7542.1.2 161-285 'Aconitase iron-sulfur domain II' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002987951 Q87SS9_nD3 7542.1.1 286-465 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002987952 Q87QN2_nD1 308.1.1 11-50 'ClpS-related' 'ClpS-related' 'ClpS-like' 'a+b two layers' 002987953 Q87TR4_nD1 212.1.1 6-115 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002987954 Q87M28_nD5 1.1.5 466-580 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987955 Q87M28_nD2 UNASSIGNED 56-115 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002987956 Q87M28_nD1 101.1.1 1-55,91-105 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002987957 Q87M28_nD4 223.1.1 126-145,266-465,586-780 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987958 Q87M28_nD3 1.1.5 146-265 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987959 Q87SZ8_nD2 318.1.1 81-170 'Ribosomal protein L6' 'Ribosomal protein L6' 'Ribosomal protein L6' 'a+b two layers' 002987960 Q87SZ8_nD1 318.1.1 1-80 'Ribosomal protein L6' 'Ribosomal protein L6' 'Ribosomal protein L6' 'a+b two layers' 002987961 Q87T64_nD1 246.1.1 1-265 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002987962 Q87KH4_nD1 2484.1.1 6-130 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987963 Q87KH4_nD2 2484.1.1 131-310 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002987964 Q87KH4_nD3 131.1.1 311-495 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002987965 Q87K97_nD2 101.1.2 366-470 'winged' 'HTH' 'HTH' 'alpha arrays' 002987966 Q87K97_nD1 101.1.2 11-365 'winged' 'HTH' 'HTH' 'alpha arrays' 002987967 Q87K97_nD4 101.1.9 596-655 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002987968 Q87K97_nD3 284.1.3 531-590 'WNK1 autoinhibitory domain' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002987969 Q87IU2_nD1 5050.1.1 6-223 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002987970 Q87FQ5_nD4 109.4.1 341-810 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002987971 Q87FQ5_nD3 101.1.2 251-340 'winged' 'HTH' 'HTH' 'alpha arrays' 002987972 Q87FQ5_nD1 2004.1.1 1-185 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987973 Q87FQ5_nD5 101.1.3 816-900 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002987974 Q87FQ5_nD2 148.1.3 186-250 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002987975 Q87SX7_nD2 3355.1.1 1-205,376-574 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002987976 Q87SX7_nD1 4261.1.1 206-280 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002987977 Q87SX7_nD3 4261.1.1 281-365 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002987978 Q87PP2_nD1 7516.1.1 6-400 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002987979 Q87J64_nD4 12.6.1 651-710 'Glycoside hydrolase family 127 middle domain-related' 'Glycoside hydrolase family 127 middle domain-related' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002987980 Q87J64_nD3 109.2.1 226-650,691-730 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002987981 Q87J64_nD1 3597.1.1 36-160 'Starch specific carbohydrate-binding modules' 'Starch specific carbohydrate-binding modules' 'Starch specific carbohydrate-binding modules' 'beta sandwiches' 002987982 Q87J64_nD6 10.1.2 811-959 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002987983 Q87J64_nD5 11.1.1 731-805 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002987984 Q87J64_nD2 10.1.2 161-225 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002987985 Q87HP9_nD1 809.1.1 1-65 'beta-lactamase-inhibitor protein, BLIP' 'beta-lactamase-inhibitor protein, BLIP' 'BLIP-like' 'a+b two layers' 002987986 Q87H04_nD1 223.1.1 1-145 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002987987 Q87P05_nD1 5085.1.1 26-85,111-460 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002987988 Q87SX9_nD2 1.1.7 241-330 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987989 Q87SX9_nD1 2004.1.1 6-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987990 Q87SX9_nD4 2004.1.1 446-470 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987991 Q87SX9_nD3 1.1.8 331-435 'Aminomethyltransferase beta-barrel domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002987992 Q87L06_nD1 3949.1.1 116-185 'tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain' 'tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain' 'tRNA delta(2)-isopentenylpyrophosphate transferase helical insertion domain' 'alpha arrays' 002987993 Q87L06_nD2 2004.1.1 1-115,186-310 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002987994 Q87MQ7_nD1 301.7.1 1-125 'YjgF-like' 'YjgF-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002987995 Q87PI3_nD1 295.1.1 51-95 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain-like' 'a+b two layers' 002987996 Q87KX4_nD1 208.1.1 26-190 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002987997 Q87R06_nD1 2002.1.1 6-245 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002987998 Q87LJ5_nD2 129.1.1 166-265 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002987999 Q87LJ5_nD1 2003.1.1 1-165 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988000 Q87KZ5_nD1 7554.1.1 76-310 '2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain' '2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain' '2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain' 'a/b three-layered sandwiches' 002988001 Q87KZ5_nD2 7515.1.1 6-75,311-510 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002988002 Q87PB4_nD1 2.1.1 1-70 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988003 Q87S06_nD1 3355.1.1 6-475 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002988004 Q87Q06_nD1 2004.1.1 41-355 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988005 Q87JU3_nD1 272.1.1 121-200 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'a+b two layers' 002988006 Q87SG2_nD1 3121.1.1 6-45 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002988007 Q87SG2_nD2 3121.1.1 51-125 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002988008 Q87SG2_nD3 6020.1.1 126-250 'Beta domain of DivIB/FtsQ' 'Beta domain of DivIB/FtsQ' 'Beta domain of DivIB/FtsQ' 'a+b two layers' 002988009 Q87PI4_nD1 4205.1.1 6-123 'SMI1/KNR4-like' 'SMI1/KNR4-like' 'SMI1/KNR4-like' 'a+b two layers' 002988010 Q79YY0_nD1 5046.1.1 46-70 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002988011 Q87FN1_nD2 881.1.1 216-325,346-385,546-565 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'a+b three layers' 002988012 Q87FN1_nD1 881.3.1 31-215 'Outer membrane-associated lipoprotein TP0453' 'Outer membrane-associated lipoprotein TP0453' 'Mog1p/PsbP-like' 'a+b three layers' 002988013 Q87FN1_nD3 881.3.1 326-345,391-505 'Outer membrane-associated lipoprotein TP0453' 'Outer membrane-associated lipoprotein TP0453' 'Mog1p/PsbP-like' 'a+b three layers' 002988014 Q87FN1_nD4 331.3.1 511-545 'Bet v1-like' 'Bet v1-like' 'TBP-like' 'a+b two layers' 002988015 Q87TF2_nD1 223.1.1 66-220 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988016 Q87TF2_nD6 2002.5.1 591-848 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002988017 Q87TF2_nD2 3757.1.1 11-35,341-365 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002988018 Q87TF2_nD5 304.48.1 426-590 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988019 Q87TF2_nD3 223.1.1 41-65,221-340 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988020 Q87TF2_nD4 4168.1.1 366-425 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988021 Q87HS4_nD1 3070.2.1 26-155 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002988022 Q87HS4_nD2 5084.5.3 156-693 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988023 Q87JM1_nD1 304.7.1 46-110 'Protease propeptides/inhibitors' 'Protease propeptides/inhibitors' 'Alpha-beta plaits' 'a+b two layers' 002988024 Q87TA2_nD1 3070.2.1 36-170 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002988025 Q87TA2_nD2 5084.5.3 171-865 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988026 Q87NF1_nD1 5.1.4 26-360 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002988027 Q87QG1_nD2 7514.1.1 111-250 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002988028 Q87QG1_nD1 1.1.7 6-110 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988029 Q87QG1_nD3 221.1.1 256-350 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988030 Q87HY2_nD1 5050.1.1 11-235 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002988031 Q87HY2_nD2 5050.1.1 236-450 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002988032 Q87NT1_nD1 101.1.6 6-30 'TrpR' 'HTH' 'HTH' 'alpha arrays' 002988033 Q87NT1_nD2 101.1.2 36-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002988034 Q87NT1_nD3 2484.1.1 116-280 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988035 Q87P71_nD1 172.1.1 21-360 'Citrate synthase' 'Citrate synthase' 'Citrate synthase-like' 'alpha complex topology' 002988036 Q79YU9_nD1 4207.1.1 66-95 'RNA polymerase II holoenzyme component SRB7 (MED21)' 'Mediator hinge subcomplex-like' 'Mediator hinge subcomplex-like' 'alpha duplicates or obligate multimers' 002988037 Q79YU9_nD2 11.1.1 111-190 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988038 Q79YU9_nD3 4.1.1 101-110,191-225 'SH3' 'SH3' 'SH3' 'beta barrels' 002988039 Q87IU7_nD1 5051.1.1 1-385 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002988040 Q87TR6_nD3 2004.1.1 216-375 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988041 Q87TR6_nD1 304.107.1 1-120 'Aminomethyltransferase folate-binding domain' 'Aminomethyltransferase folate-binding domain' 'Alpha-beta plaits' 'a+b two layers' 002988042 Q87TR6_nD2 601.25.1 121-215,381-453 'TrmE connector domain' 'TrmE connector domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002988043 Q87G98_nD2 129.1.1 171-290 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002988044 Q87G98_nD1 2003.1.1 6-170 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988045 Q87NM8_nD1 102.1.2 16-195 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002988046 Q87LF0_nD1 1.1.16 6-150 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988047 Q87KB1_nD1 1075.3.1 26-240 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988048 Q87J74_nD1 3860.1.1 6-60 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002988049 Q87J74_nD2 2.24.1 61-140 'probable receptor YhhM' 'probable receptor YhhM' 'OB-fold' 'beta barrels' 002988050 Q87H30_nD1 208.1.1 1-175 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002988051 Q87GW4_nD1 139.1.1 21-185 'Cytochrome c3-like' 'Cytochrome c3-like' 'Multiheme cytochromes' 'few secondary structure elements' 002988052 Q87NU1_nD1 7524.1.1 1-265 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988053 Q87NU1_nD2 7524.1.1 266-365 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988054 Q87RJ2_nD1 5084.5.1 6-469 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988055 Q87GC0_nD1 222.1.1 6-160 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002988056 Q87NX8_nD1 3826.1.1 1-50 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'alpha bundles' 002988057 Q87KY0_nD1 3529.1.1 46-80 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'beta sandwiches' 002988058 Q87KY0_nD2 230.5.1 81-190,246-275 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002988059 Q87KY0_nD3 5046.1.1 276-395 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002988060 Q87N74_nD1 213.1.1 6-160 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988061 Q87Q91_nD4 2.1.1 506-590 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988062 Q87Q91_nD3 4156.1.1 336-505 'Sec63 N-terminal subdomain-like' 'Sec63 N-terminal subdomain-like' 'Sec63 N-terminal subdomain-like' 'alpha arrays' 002988063 Q87Q91_nD1 2004.1.1 1-165 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988064 Q87Q91_nD6 UNASSIGNED 631-784 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002988065 Q87Q91_nD5 64.5.1 591-630 'Connector region of RNA helicase HrpB' 'Connector region of RNA helicase HrpB' 'WW domain-like' 'beta meanders' 002988066 Q87Q91_nD2 2004.1.1 166-335 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988067 P0A308_nD1 5041.1.1 6-75 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002988068 Q87R53_nD1 4245.1.1 21-115 'SMc04008-like' 'SMc04008-like' 'SMc04008-like' 'alpha duplicates or obligate multimers' 002988069 Q87P40_nD1 7579.1.1 1-310 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002988070 Q87RF9_nD1 101.1.11 1-35 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002988071 Q87RF9_nD2 110.2.1 68-180 'Replication modulator SeqA-C' 'Replication modulator SeqA-C' 'DEATH domain' 'alpha arrays' 002988072 Q87QD4_nD1 221.1.2 1-55 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988073 Q87QD4_nD2 304.102.1 56-230 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002988074 Q87GX9_nD1 5084.1.1 21-185 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002988075 Q87GX9_nD2 301.3.1 201-325 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002988076 Q87QY4_nD2 2004.1.1 171-350 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988077 Q87QY4_nD5 148.1.3 656-750 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988078 Q87QY4_nD1 148.1.2 1-140 'double Clp-N' 'Histone-related' 'Histone-like' 'alpha arrays' 002988079 Q87QY4_nD3 148.1.3 351-440 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988080 Q87QY4_nD4 2004.1.1 441-655 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988081 Q87NW0_nD1 208.1.1 1-129 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002988082 Q87G58_nD1 1075.3.1 6-280 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988083 Q87S60_nD1 307.1.1 26-279 'Hedgehog/DD-peptidase' 'Hedgehog/DD-peptidase' 'Hedgehog/DD-peptidase' 'a+b two layers' 002988084 Q87M05_nD1 616.1.1 1-89 'S15/NS1 RNA-binding domain' 'S15/NS1 RNA-binding domain' 'S15/NS1 RNA-binding domain' 'alpha arrays' 002988085 Q87QI9_nD1 5027.1.1 6-45 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'extended segments' 002988086 Q87ML0_nD1 5069.1.1 11-235 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002988087 Q87K27_nD2 2003.1.1 176-325 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988088 Q87K27_nD1 236.1.1 1-175,326-380 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002988089 Q87FS3_nD1 174.1.1 6-129 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'few secondary structure elements' 002988090 Q87PN2_nD4 101.1.1 451-514 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988091 Q87PN2_nD3 148.1.3 311-390 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988092 Q87PN2_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988093 Q87PN2_nD2 2004.1.1 136-310 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988094 Q87SF3_nD4 2003.1.10 556-670 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988095 Q87SF3_nD3 206.1.3 121-405,671-935 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002988096 Q87SF3_nD1 2003.1.10 6-120 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988097 Q87SF3_nD5 7543.1.1 941-1055 'Methylglyoxal synthase-like' 'Methylglyoxal synthase-like' 'Methylglyoxal synthase-like' 'a/b three-layered sandwiches' 002988098 Q87SF3_nD2 101.1.2 406-555 'winged' 'HTH' 'HTH' 'alpha arrays' 002988099 Q87LV6_nD1 2005.1.1 1-260,281-294 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988100 Q87Q77_nD2 602.1.1 201-310,331-510 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'alpha arrays' 002988101 Q87Q77_nD1 4952.1.1 1-200 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'alpha arrays' 002988102 Q79YT4_nD1 3718.1.1 6-95 'Flagellar protein fliT' 'Flagellar protein fliT' 'Flagellar protein fliT' 'alpha bundles' 002988103 Q87RR1_nD1 2002.1.1 16-320 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988104 Q87P50_nD3 160.1.1 366-440 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002988105 Q87P50_nD1 1.1.7 21-95 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988106 Q87P50_nD2 2004.1.1 96-365 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988107 Q87KQ3_nD1 156.1.1 1-35 'Ribosomal protein L7/12, oligomerisation (N-terminal) domain' 'Ribosomal protein L7/12, oligomerisation (N-terminal) domain' 'Ribosomal protein L7/12, oligomerisation (N-terminal) domain' 'alpha duplicates or obligate multimers' 002988108 Q87KQ3_nD2 308.1.1 56-120 'ClpS-related' 'ClpS-related' 'ClpS-like' 'a+b two layers' 002988109 Q87QX3_nD1 327.16.1 1-70 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988110 Q87QX3_nD2 375.1.1 76-105 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988111 Q87SC0_nD1 7599.1.1 1-258 'UPF0246 protein YaaA' 'UPF0246 protein YaaA' 'UPF0246 protein YaaA' 'a/b three-layered sandwiches' 002988112 Q87N91_nD5 225.1.1 296-430 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002988113 Q87N91_nD2 223.1.1 41-135 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988114 Q87N91_nD1 605.1.1 11-40,136-165 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988115 Q87N91_nD4 605.1.1 221-295 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988116 Q87N91_nD3 4168.1.1 166-220 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988117 Q87IL6_nD1 2004.1.1 1-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988118 Q87IL6_nD2 2004.1.1 216-395 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988119 Q87QV3_nD1 2002.1.1 6-280 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988120 Q87SH1_nD1 3939.1.1 6-85 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002988121 Q87JQ0_nD1 3922.1.1 6-45,266-290 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002988122 Q87JQ0_nD2 223.1.1 46-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988123 Q87JQ0_nD3 304.48.1 291-450 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988124 Q87NH1_nD1 265.1.1 6-75 'RNA bacteriophage capsid protein' 'RNA bacteriophage capsid protein' 'RNA bacteriophage capsid protein' 'a+b two layers' 002988125 Q87NM1_nD1 3831.1.1 41-150 'Secreted protein of unknown function DUF1311' 'Secreted protein of unknown function DUF1311' 'Secreted protein of unknown function DUF1311' 'alpha bundles' 002988126 Q87LA7_nD1 3454.1.1 46-109 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002988127 Q87GI7_nD1 636.1.1 56-185 'SopE-like GEF domain' 'SopE-like GEF domain' 'SopE-like GEF domain' 'alpha arrays' 002988128 Q87K56_nD1 10.12.1 1-230 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002988129 Q87N51_nD1 102.1.1 1-79 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002988130 Q87PB3_nD1 4081.1.1 11-195 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'beta sandwiches' 002988131 Q87PB3_nD2 2498.1.1 196-445 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002988132 Q87PB3_nD3 11.1.1 446-545 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988133 Q87PB3_nD4 109.4.1 546-865 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002988134 Q87SN4_nD2 2003.1.5 156-480 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988135 Q87SN4_nD1 3962.1.1 6-155 'N-terminal helical domain in restriction-modification system methylation subunit' 'N-terminal helical domain in restriction-modification system methylation subunit' 'N-terminal helical domain in restriction-modification system methylation subunit-like' 'alpha arrays' 002988136 Q87IX6_nD7 304.28.1 671-715,801-855 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988137 Q87IX6_nD6 304.28.2 716-800 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988138 Q87IX6_nD5 304.28.1 556-670 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988139 Q87IX6_nD8 5067.1.1 511-555,856-1040 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988140 Q87IX6_nD2 304.28.2 186-215,236-270 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988141 Q87IX6_nD4 5067.1.1 1-40,326-510 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988142 Q87IX6_nD3 304.28.1 136-185,271-325 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988143 Q87IX6_nD1 304.28.1 41-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988144 Q87LT7_nD3 2004.1.1 146-560 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988145 Q87LT7_nD1 1112.1.1 6-60 'MshE c-di-GMP-binding domain' 'MshE c-di-GMP-binding domain' 'MshE c-di-GMP-binding domain' 'alpha arrays' 002988146 Q87LT7_nD2 327.8.1 61-140 'GSPII protein E N-terminal domain-like' 'GSPII protein E N-terminal domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988147 Q87G05_nD3 4168.1.1 196-255 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988148 Q87G05_nD4 605.1.1 256-315 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988149 Q87G05_nD1 605.1.1 1-40,171-195 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988150 Q87G05_nD2 223.1.1 41-160 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988151 Q87G05_nD5 225.1.1 316-455 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002988152 Q87Q86_nD1 2004.1.1 26-125 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988153 Q87GB7_nD2 4947.1.1 126-215 'barrel domain in MalF N-terminal region' 'barrel domain in MalF N-terminal region' 'barrel domain in MalF N-terminal region' 'a+b complex topology' 002988154 Q87GB7_nD1 4274.1.1 26-70 'Transmembrane helices in MalF N-terminal region' 'Transmembrane helices in MalF N-terminal region' 'Transmembrane helices in MalF N-terminal region' 'extended segments' 002988155 Q87GB7_nD3 4948.1.1 106-125,216-265 'linker domain in MalF N-terminal region' 'linker domain in MalF N-terminal region' 'linker domain in MalF N-terminal region' 'a+b complex topology' 002988156 Q87GB7_nD4 1075.3.1 71-105,266-520 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988157 Q87RG1_nD1 3826.1.1 1-65 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'alpha bundles' 002988158 Q87RH0_nD2 2005.1.1 196-550 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988159 Q87RH0_nD1 210.1.3 1-190 'Class II glutamine amidotransferases' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002988160 Q87PX0_nD1 2500.1.1 26-525 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'a/b barrels' 002988161 Q87LW4_nD1 295.1.1 1-120 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain-like' 'a+b two layers' 002988162 Q87R76_nD1 102.1.1 36-99 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002988163 Q87G20_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002988164 Q87G20_nD2 7523.1.1 91-160,266-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988165 Q87G20_nD3 7523.1.1 161-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988166 Q87TH7_nD3 223.1.1 276-380 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988167 Q87TH7_nD4 304.48.1 381-555 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988168 Q87TH7_nD2 223.1.1 136-275 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988169 Q87TH7_nD5 2002.5.1 556-810 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002988170 Q87TH7_nD1 223.2.1 6-135 'profilin-like' 'profilin-like' 'Profilin-like' 'a+b three layers' 002988171 Q87LB1_nD3 2004.1.1 146-574 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988172 Q87LB1_nD1 1112.1.1 6-60 'MshE c-di-GMP-binding domain' 'MshE c-di-GMP-binding domain' 'MshE c-di-GMP-binding domain' 'alpha arrays' 002988173 Q87LB1_nD2 327.8.1 66-145 'GSPII protein E N-terminal domain-like' 'GSPII protein E N-terminal domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988174 Q87HK1_nD2 2492.1.1 131-275 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002988175 Q87HK1_nD1 221.10.1 41-110 'FdhD/NarQ beta-grasp fold domain' 'FdhD/NarQ beta-grasp fold domain' 'beta-Grasp' 'a+b two layers' 002988176 Q87M55_nD4 11.1.1 606-705 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988177 Q87M55_nD3 2002.1.1 316-605 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988178 Q87M55_nD5 12.3.1 706-1020 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002988179 Q87M55_nD2 11.1.1 211-315 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988180 Q87M55_nD1 10.1.2 1-210 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002988181 Q87G57_nD1 1075.3.1 31-305 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988182 Q87LY9_nD2 5079.1.1 126-314 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'alpha duplicates or obligate multimers' 002988183 Q87LY9_nD1 282.1.1 6-120 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002988184 Q87JK6_nD1 213.1.1 26-304 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988185 Q87M47_nD3 5042.1.1 6-25,261-320 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'extended segments' 002988186 Q87M47_nD2 5060.2.1 141-260 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002988187 Q87M47_nD1 4120.1.1 81-140 'Tim10/DDP' 'Tim10/DDP' 'Tim10/DDP' 'few secondary structure elements' 002988188 Q87TK7_nD1 4303.1.1 6-35,56-420 'lvD/EDD N-terminal domain-like' 'lvD/EDD N-terminal domain-like' 'lvD/EDD N-terminal domain-like' 'alpha arrays' 002988189 Q87TK7_nD2 2487.1.1 421-598 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002988190 Q87QN3_nD1 2004.1.1 1-225 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988191 Q87I91_nD3 5090.2.1 381-525 'Immune inhibitor A metallopeptidase C-terminal domain' 'Immune inhibitor A metallopeptidase C-terminal domain' 'Viral glycoprotein, central and dimerisation domains-like' 'beta complex topology' 002988192 Q87I91_nD7 11.1.1 881-975 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988193 Q87I91_nD4 10.1.2 526-695 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002988194 Q87I91_nD6 11.1.1 796-875 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988195 Q87I91_nD1 207.2.1 31-100 'Pectin lyase-like' 'Pectin lyase-like' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002988196 Q87I91_nD2 2498.1.1 146-380 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002988197 Q87I91_nD5 11.1.1 696-790 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988198 Q87PZ6_nD1 9.1.1 21-105 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002988199 Q87KZ4_nD1 2007.2.5 36-140 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988200 Q87M80_nD2 7523.1.1 96-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988201 Q87M80_nD1 101.1.2 6-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002988202 Q87P00_nD1 107.1.1 31-190 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002988203 Q87P00_nD2 107.1.1 191-325 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002988204 Q87SI1_nD1 5069.1.1 16-220,251-295 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002988205 Q87SI1_nD2 5068.1.1 296-420 'a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)' 'a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)' 'a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)' 'alpha bundles' 002988206 Q87PP1_nD2 7512.1.1 166-350 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002988207 Q87PP1_nD1 7512.1.1 1-165 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002988208 Q87SY0_nD1 2005.1.1 6-300 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988209 Q87HT0_nD2 75.1.1 86-225 'Cyclophilin-like' 'Cyclophilin-like' 'Cyclophilin-like' 'beta barrels' 002988210 Q87HT0_nD1 306.6.1 1-85 'PH0987 N-terminal domain-like' 'PH0987 N-terminal domain-like' 'Glucose permease domain IIB-like' 'a+b two layers' 002988211 Q87N08_nD1 327.6.1 1-80 'Fe-S cluster assembly (FSCA) domain-like' 'Fe-S cluster assembly (FSCA) domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988212 Q87N08_nD2 2004.1.1 81-358 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988213 Q87RM5_nD2 4244.1.1 21-70,136-285 'EreA/ChaN-like' 'EreA/ChaN-like' 'EreA/ChaN-like' 'a/b three-layered sandwiches' 002988214 Q87RM5_nD1 604.12.1 91-135 'MIT domain' 'MIT domain' 'Spectrin repeat-like' 'alpha bundles' 002988215 Q87NZ0_nD1 7523.1.1 26-115,261-335 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988216 Q87NZ0_nD2 7523.1.1 116-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988217 Q87MY9_nD1 2004.1.1 11-335 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988218 Q87SK3_nD3 601.33.1 381-510 'CHAD domain' 'CHAD domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002988219 Q87SK3_nD2 601.33.1 211-380 'CHAD domain' 'CHAD domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002988220 Q87SK3_nD1 868.1.1 1-210 'mRNA triphosphatase CET1-related' 'mRNA triphosphatase CET1-related' 'mRNA triphosphatase CET1-related' 'a+b complex topology' 002988221 Q87P99_nD4 7550.1.1 211-300 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'a/b three-layered sandwiches' 002988222 Q87P99_nD3 4049.1.1 151-210 'alpha-helical domain in siroheme synthase middle domains-like' 'alpha-helical domain in siroheme synthase middle domains-like' 'alpha-helical domain in siroheme synthase middle domains-like' 'alpha superhelices' 002988223 Q87P99_nD1 2003.1.1 6-115 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988224 Q87P99_nD2 4029.1.1 116-150 'SSH domain in siroheme synthase middle domains-like' 'SSH domain in siroheme synthase middle domains-like' 'SSH domain in siroheme synthase middle domains-like' 'a+b duplicates or obligate multimers' 002988225 Q87H34_nD2 7523.1.1 61-145,241-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988226 Q87H34_nD1 3050.1.1 21-50 'Ribosomal protein L19 (L19e) C-terminal domain' 'Ribosomal protein L19 (L19e) C-terminal domain' 'Ribosomal protein L19 (L19e) C-terminal domain' 'alpha bundles' 002988227 Q87H34_nD3 7523.1.1 146-240 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988228 Q87TN1_nD3 304.28.1 136-180,266-325 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988229 Q87TN1_nD4 5067.1.1 1-35,326-500 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988230 Q87TN1_nD1 304.28.1 41-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988231 Q87TN1_nD7 304.28.1 651-695,786-845 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988232 Q87TN1_nD2 304.28.2 181-265 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988233 Q87TN1_nD8 5067.1.1 501-550,846-1035 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988234 Q87TN1_nD5 304.28.1 551-650 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988235 Q87TN1_nD6 304.28.2 696-785 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988236 Q87KU2_nD2 2003.1.5 106-290 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988237 Q87KU2_nD1 304.4.1 1-90 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002988238 Q87ND3_nD1 150.1.2 1-350 'Heme oxygenase/Ribonucleotide reductase' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002988239 Q87JH1_nD1 10.6.1 21-30,52-270 'Calcium-mediated lectin' 'Calcium-mediated lectin' 'jelly-roll' 'beta sandwiches' 002988240 Q87JH1_nD2 3342.1.1 256-555 'C-terminal domain in a putative lipoprotein BACOVA_00967' 'C-terminal domain in a putative lipoprotein BACOVA_00967' 'C-terminal domain in a putative lipoprotein BACOVA_00967' 'beta sandwiches' 002988241 Q87NK6_nD1 3538.1.1 6-210 'MerF' 'MerF' 'MerF' 'extended segments' 002988242 Q87LZ2_nD1 192.1.1 6-75 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002988243 Q87LZ2_nD2 284.1.1 76-155 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002988244 Q87MK6_nD1 2.10.1 226-360 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002988245 Q87PQ4_nD4 1.1.2 676-810 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988246 Q87PQ4_nD3 2003.2.1 111-195,421-675 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002988247 Q87PQ4_nD2 2003.2.1 196-420 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002988248 Q87PQ4_nD1 1001.1.1 41-110 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'a+b two layers' 002988249 Q87HK8_nD1 301.3.1 73-200 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002988250 Q87QC4_nD1 2004.1.1 1-220 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988251 Q87GI1_nD1 5058.1.1 1-75 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002988252 Q87HT8_nD3 101.41.1 441-550 'MRB1590 C-terminal domain' 'MRB1590 C-terminal domain' 'HTH' 'alpha arrays' 002988253 Q87HT8_nD2 2004.1.1 156-440 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988254 Q87HT8_nD1 241.18.1 1-155 'MRB1590 N-terminal domain' 'MRB1590 N-terminal domain' 'Type III secretory system chaperone-like' 'a+b two layers' 002988255 Q87J75_nD1 1079.1.1 6-200 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002988256 Q87LJ2_nD1 11.1.1 21-143 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988257 Q87TJ9_nD1 2498.1.1 6-675 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002988258 Q87PM9_nD1 102.2.1 21-45 'H2TH' 'H2TH' 'HhH/H2TH' 'alpha arrays' 002988259 Q87GV8_nD1 284.1.1 16-88 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002988260 Q87GP5_nD1 186.1.1 1-190 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002988261 Q87GP5_nD2 101.1.8 191-390 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002988262 Q87GP5_nD3 101.1.8 391-430 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002988263 Q87FJ4_nD1 211.1.1 1-60 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988264 Q87FJ4_nD2 211.1.1 61-139 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988265 Q87JL6_nD1 2006.1.1 6-270 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002988266 Q87SQ9_nD2 4002.1.1 161-360 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002988267 Q87SQ9_nD1 2007.1.7 6-160 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988268 Q87IA8_nD1 2002.1.1 6-410 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988269 Q87GK3_nD1 237.1.1 1-155 'ADP-ribosylation' 'ADP-ribosylation' 'ADP-ribosylation' 'a+b complex topology' 002988270 Q87S07_nD2 2005.1.1 201-400 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988271 Q87S07_nD1 2007.1.1 6-200 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988272 Q87S07_nD3 327.3.1 401-515 'GMP synthetase C-terminal dimerisation domain' 'GMP synthetase C-terminal dimerisation domain' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988273 Q03478_nD1 301.3.1 126-285 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002988274 Q87MH7_nD1 2498.1.1 31-265 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002988275 Q87MH7_nD2 109.4.1 266-480 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002988276 Q87P72_nD2 7542.1.2 241-360 'Aconitase iron-sulfur domain II' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002988277 Q87P72_nD1 7542.1.1 6-240 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002988278 Q87P72_nD3 7542.1.1 361-595 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002988279 Q87P72_nD4 2487.1.1 611-863 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002988280 Q87MN5_nD1 2007.2.1 1-174 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988281 Q87QY0_nD1 2.1.1 31-60,111-159 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988282 Q87IH5_nD1 141.1.1 6-280 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002988283 Q87JC4_nD2 2002.1.1 106-330 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988284 Q87JC4_nD1 218.1.1 1-105 'Enolase N-terminal domain-like' 'Enolase N-terminal domain-like' 'Enolase-N/ribosomal protein' 'a+b two layers' 002988285 Q87LI8_nD1 304.120.1 1-105 'Ferredoxin-like domain in ThiI' 'Ferredoxin-like domain in ThiI' 'Alpha-beta plaits' 'a+b two layers' 002988286 Q87LI8_nD2 2003.1.5 111-340 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988287 Q87KJ9_nD1 2488.1.1 22-195 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002988288 Q87RB7_nD3 378.1.1 426-563 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002988289 Q87RB7_nD2 7070.1.1 216-420 'Stalk domain of SBV glycoprotein Gc' 'Stalk domain of SBV glycoprotein Gc' 'Stalk domain of SBV glycoprotein Gc' 'beta barrels' 002988290 Q87RB7_nD1 2003.1.5 6-215 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988291 Q87P56_nD3 2485.1.1 371-445,496-515 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002988292 Q87P56_nD4 3253.1.1 446-495 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'a+b two layers' 002988293 Q87P56_nD1 604.7.1 21-265 'Tubulin chaperone cofactor A' 'Tubulin chaperone cofactor A' 'Spectrin repeat-like' 'alpha bundles' 002988294 Q87P56_nD6 3255.1.1 606-708 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b three-layered sandwiches' 002988295 Q87P56_nD2 3538.1.1 276-330 'MerF' 'MerF' 'MerF' 'extended segments' 002988296 Q87P56_nD5 3254.1.1 516-600 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'alpha arrays' 002988297 Q87PQ6_nD2 181.1.1 61-110 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G proteins-like' 'alpha bundles' 002988298 Q87PQ6_nD1 11.1.1 1-45 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988299 Q87ND4_nD3 2500.1.1 221-750 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'a/b barrels' 002988300 Q87ND4_nD2 1074.1.1 101-220 'Alpha helical domain of ribonucleotide reductases' 'Alpha helical domain of ribonucleotide reductases' 'Alpha helical domain of ribonucleotide reductases' 'alpha arrays' 002988301 Q87ND4_nD1 103.2.1 6-100 'ATP cone' 'ATP cone' 'RuvA-C' 'alpha arrays' 002988302 Q87NI8_nD2 4021.1.1 171-450 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha-helical domain in 2-methylcitrate dehydratase PrpD' 'alpha arrays' 002988303 Q87NI8_nD1 298.3.1 6-155 'Serine dehydratase beta chain-like' 'Serine dehydratase beta chain-like' 'FwdE/GAPDH domain-like' 'a+b two layers' 002988304 Q87PY2_nD1 2003.1.5 1-210 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988305 Q87N10_nD3 5084.5.3 161-370 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988306 Q87N10_nD4 5084.5.3 371-615,636-665 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988307 Q87N10_nD1 7026.1.1 1-25 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'beta meanders' 002988308 Q87N10_nD2 7026.1.1 26-115 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'beta meanders' 002988309 Q87IU8_nD1 622.1.1 26-113 'HSC20 (HSCB), C-terminal oligomerisation domain' 'HSC20 (HSCB), C-terminal oligomerisation domain' 'YvfG-like' 'alpha bundles' 002988310 Q87JG2_nD1 211.1.1 6-120 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988311 Q87SW3_nD1 810.1.1 1-110 'BtrG-like (Pfam 03674)' 'BtrG-like (Pfam 03674)' 'BtrG-like (Pfam 03674)' 'a+b two layers' 002988312 Q87SU7_nD1 2003.1.1 1-145 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988313 Q87SU7_nD2 279.1.1 146-310 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'a+b complex topology' 002988314 Q87NW3_nD2 3615.1.1 6-45,291-340 'Bacterial dynamin-like protein helical domain' 'Bacterial dynamin-like protein helical domain' 'Bacterial dynamin-like protein helical domain' 'alpha bundles' 002988315 Q87NW3_nD8 2007.1.3 766-900 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988316 Q87NW3_nD5 605.1.1 391-460 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988317 Q87NW3_nD6 225.1.1 461-630 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002988318 Q87NW3_nD9 2007.1.3 921-1050 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988319 Q87NW3_nD7 2007.1.3 631-765 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988320 Q87NW3_nD1 601.1.1 46-145 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002988321 Q87NW3_nD3 601.4.1 151-290 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002988322 Q87NW3_nD4 4168.1.1 341-370 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988323 Q87JY0_nD3 3016.1.1 396-460 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002988324 Q87JY0_nD2 7577.1.1 96-395,461-480 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002988325 Q87JY0_nD1 101.1.2 11-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002988326 Q87SE9_nD2 7523.1.1 81-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988327 Q87SE9_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002988328 Q87LU7_nD2 304.147.1 226-305 'Tetrahydrodipicolinate acetyltransferase N-terminal domain' 'Tetrahydrodipicolinate acetyltransferase N-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002988329 Q87LU7_nD1 2004.1.1 1-225 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988330 Q87J47_nD1 5051.1.1 6-300 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002988331 Q87T05_nD1 192.4.1 1-60 'Ribosomal protein L29 (L29p)' 'Ribosomal protein L29 (L29p)' 'Long alpha-hairpin' 'alpha bundles' 002988332 Q87QM0_nD1 578.1.1 1-205 'YcfC-like' 'YcfC-like' 'YcfC-like' 'alpha arrays' 002988333 Q87GT2_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002988334 Q87GT2_nD2 7523.1.1 86-165,271-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988335 Q87GT2_nD3 7523.1.1 166-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988336 Q87Q19_nD1 2003.1.3 1-418 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988337 Q87PF8_nD1 5038.1.1 11-470 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002988338 Q87QJ7_nD1 2005.2.1 1-210 'YdcF' 'YdcF' 'HUP domain-like' 'a/b three-layered sandwiches' 002988339 Q87I31_nD1 222.1.1 11-140 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002988340 Q87SG1_nD1 2484.1.1 6-400 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988341 Q87P90_nD3 4168.1.1 131-190 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988342 Q87P90_nD4 5086.1.1 191-460 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002988343 Q87P90_nD1 5043.2.1 11-60,101-130 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002988344 Q87P90_nD2 2004.1.1 61-100 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988345 Q87N76_nD2 3922.1.1 91-175 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002988346 Q87N76_nD5 1.1.7 26-40,311-375 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988347 Q87N76_nD1 604.1.1 1-25 'Spectrin repeat' 'Spectrin repeat' 'Spectrin repeat-like' 'alpha bundles' 002988348 Q87N76_nD3 325.1.7 56-90,176-215 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002988349 Q87N76_nD4 1.1.7 41-55,216-310 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988350 Q87R65_nD2 323.1.1 156-375 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002988351 Q87R65_nD1 323.1.1 6-155 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002988352 Q87R65_nD3 327.5.1 376-480 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988353 Q87QA0_nD2 2004.1.1 336-595 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988354 Q87QA0_nD1 1075.4.1 6-330 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988355 Q87LB8_nD2 1.1.7 86-165 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988356 Q87LB8_nD1 274.1.1 11-85,166-235 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002988357 Q87G21_nD2 7579.1.1 1-65,406-675 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002988358 Q87G21_nD1 5.1.4 66-405 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002988359 Q87KB5_nD1 2003.4.1 6-165 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002988360 Q87KB5_nD2 2003.4.1 166-330 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002988361 Q87KB5_nD3 304.8.1 336-425 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002988362 Q87KB5_nD4 304.8.1 426-515 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002988363 Q87SJ9_nD1 2003.6.1 6-25,46-315 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002988364 Q87SJ9_nD2 2005.1.1 326-470 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988365 Q87RA2_nD1 132.1.1 1-85 'Acyl-carrier protein (ACP)' 'Acyl-carrier protein (ACP)' 'ACP-like' 'alpha bundles' 002988366 Q87S61_nD1 315.1.1 1-110 'Tautomerase/MIF' 'Tautomerase/MIF' 'Tautomerase/MIF-like' 'a+b two layers' 002988367 Q87TD3_nD1 274.1.1 36-110,141-190 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002988368 Q87R87_nD1 7523.1.1 21-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988369 Q87TE4_nD1 2494.1.1 1-144 'DTD-like (Pfam 02580)' 'DTD-like (Pfam 02580)' 'DTD-like' 'a/b three-layered sandwiches' 002988370 Q87LC3_nD1 604.39.1 1-160 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002988371 Q87IR5_nD2 2.1.1 76-235 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988372 Q87IR5_nD1 605.1.1 26-75,236-270 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988373 Q87N95_nD4 2002.1.1 641-670 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988374 Q87N95_nD3 2002.1.1 336-345,366-655 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988375 Q87N95_nD2 2002.1.1 116-130,346-365 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988376 Q87N95_nD1 2007.1.3 6-230,277-335 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988377 Q87I84_nD1 301.3.1 26-110 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002988378 Q87P27_nD1 627.1.1 36-114 'VPS9 domain' 'VPS9 domain' 'VPS9 domain' 'alpha complex topology' 002988379 Q87IV5_nD1 3227.1.1 1-355 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002988380 Q87IV5_nD2 2007.2.2 376-465 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988381 Q87KR2_nD2 2003.1.1 91-275 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988382 Q87KR2_nD1 2003.1.11 6-90,276-305 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988383 Q87MI1_nD1 304.8.1 1-80 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002988384 Q87MI1_nD2 304.8.1 86-180 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002988385 Q87SL1_nD1 304.45.1 1-155 '6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK' '6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK' 'Alpha-beta plaits' 'a+b two layers' 002988386 Q87GV2_nD1 2003.1.5 6-200 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988387 Q87NP0_nD1 6155.1.1 46-105 'SWEET transporter' 'SWEET transporter' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002988388 Q79YX4_nD1 2.10.1 16-160 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002988389 Q87GM5_nD1 3926.1.1 6-45 'V-type proton ATPase subunit D' 'V-type proton ATPase subunit D' 'V-type proton ATPase subunit D' 'alpha bundles' 002988390 Q87KI0_nD4 327.12.1 476-595 'UbiD C-terminal domain-like' 'UbiD C-terminal domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988391 Q87KI0_nD3 327.12.1 326-470 'UbiD C-terminal domain-like' 'UbiD C-terminal domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988392 Q87KI0_nD1 3688.1.1 1-90 'N-terminal subdomain in UbiD middle domain' 'N-terminal subdomain in UbiD middle domain' 'N-terminal subdomain in UbiD middle domain' 'a+b two layers' 002988393 Q87KI0_nD2 1.1.5 91-325 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988394 Q87KW8_nD1 3711.1.1 46-165 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'alpha bundles' 002988395 Q87GS5_nD3 5079.1.1 256-445 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'alpha duplicates or obligate multimers' 002988396 Q87GS5_nD2 282.1.1 126-255 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002988397 Q87GS5_nD1 109.13.1 6-125 'MgtE N-terminal domain-like' 'MgtE N-terminal domain-like' 'Repetitive alpha hairpins' 'alpha superhelices' 002988398 Q87GH8_nD2 2004.1.1 76-340 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988399 Q87GH8_nD1 1.1.7 6-75 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988400 Q87GH8_nD3 160.1.1 341-420 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002988401 Q87GV1_nD1 101.1.2 1-55 'winged' 'HTH' 'HTH' 'alpha arrays' 002988402 Q87GV1_nD2 304.4.1 56-145 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002988403 Q87GJ6_nD2 101.1.1 66-115 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988404 Q87GJ6_nD1 101.1.1 1-60 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988405 Q87GJ6_nD3 2484.1.1 116-310 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988406 Q87NC2_nD4 4969.1.1 641-780 '"thumb" domain in bacteriophage RB69-like DNA polymerase I' '"thumb" domain in bacteriophage RB69-like DNA polymerase I' '"thumb" domain in bacteriophage RB69-like DNA polymerase I' 'alpha bundles' 002988407 Q87NC2_nD3 304.48.1 371-640 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988408 Q87NC2_nD2 2484.1.1 151-370 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988409 Q87NC2_nD1 304.114.1 1-150 'Family B DNA polymerase insertion domain' 'Family B DNA polymerase insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002988410 Q87NU5_nD1 232.1.1 6-360 'Pentein' 'Pentein' 'Pentein' 'a+b duplicates or obligate multimers' 002988411 Q87M87_nD2 213.1.1 301-445 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988412 Q87M87_nD1 7531.1.1 6-295 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002988413 Q87G28_nD1 213.1.1 6-90 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988414 Q79YW5_nD1 866.1.1 46-235 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002988415 Q79YW5_nD2 1.1.10 246-265,286-320 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988416 Q87HD6_nD2 327.11.1 141-200,231-285 'Prokaryotic type KH domain (KH-domain type II)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988417 Q87HD6_nD1 294.2.1 11-135 'Penicillin-binding protein 2x (pbp-2x)-C' 'Penicillin-binding protein 2x (pbp-2x)-C' 'CI-2 family of serine protease inhibitors-like' 'a+b two layers' 002988418 Q87IN1_nD3 327.5.1 531-655 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988419 Q87IN1_nD2 323.1.1 1-10,271-530 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002988420 Q87IN1_nD1 7584.1.1 11-270 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002988421 Q87NG1_nD1 2007.1.3 1-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988422 Q87NG1_nD2 101.1.3 141-210 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002988423 Q87N81_nD1 7561.1.1 1-174 'Isochorismatase-like hydrolases' 'Isochorismatase-like hydrolases' 'Isochorismatase-like hydrolases' 'a/b three-layered sandwiches' 002988424 Q87QW3_nD2 101.1.2 76-200 'winged' 'HTH' 'HTH' 'alpha arrays' 002988425 Q87QW3_nD1 3492.1.1 6-75 'Chromosome partition protein mukE N-terminal domain' 'Chromosome partition protein mukE N-terminal domain' 'Chromosome partition protein mukE N-terminal domain' 'a+b two layers' 002988426 Q87QR4_nD1 216.1.1 6-140 'UBC-like' 'UBC-like' 'UBC-like' 'a+b two layers' 002988427 Q87QR4_nD2 2003.1.9 156-385 'Activating enzymes of the ubiquitin-like proteins' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988428 Q87J29_nD1 2484.6.1 41-135 'Periplasmic domain of ExbD/TolR' 'Periplasmic domain of ExbD/TolR' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988429 Q87LX4_nD1 11.1.1 1-90 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988430 Q87LX4_nD2 109.2.1 91-570 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002988431 Q87RD8_nD1 101.1.2 1-65 'winged' 'HTH' 'HTH' 'alpha arrays' 002988432 Q87R60_nD2 191.1.1 61-195 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002988433 Q87R60_nD1 101.1.1 6-60 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988434 Q87JD2_nD1 11.1.1 26-90 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988435 Q87G24_nD4 212.1.1 541-670 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002988436 Q87G24_nD3 148.1.3 446-540 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988437 Q87G24_nD5 3010.1.1 671-785 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'a/b three-layered sandwiches' 002988438 Q87G24_nD2 2004.1.1 6-15,36-85,311-445 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988439 Q87G24_nD1 3714.1.1 86-310 'Lon-like protease MtaLonC helical domain' 'Lon-like protease MtaLonC helical domain' 'Lon-like protease MtaLonC helical domain' 'a+b two layers' 002988440 Q87M60_nD1 212.1.1 6-200 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002988441 Q87M60_nD2 304.1.1 201-380 'GHMP Kinase, C-terminal domain' 'GHMP Kinase, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002988442 Q87RF3_nD1 5069.1.3 1-114 'Fumarate reductase respiratory complex transmembrane subunits' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002988443 Q87KS6_nD1 2004.1.1 11-290 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988444 Q87KS6_nD2 148.1.3 291-490 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988445 Q87T96_nD1 2004.1.1 1-220 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988446 Q87IP2_nD1 2006.1.1 1-200 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002988447 Q87LK0_nD1 4113.1.1 1-185 'VC0467-like' 'VC0467-like' 'VC0467-like' 'beta barrels' 002988448 Q87N71_nD1 241.1.1 26-175 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002988449 Q87GY8_nD2 284.2.1 316-385 'Chitinase insertion domain' 'Chitinase insertion domain' 'FKBP-like' 'a+b two layers' 002988450 Q87GY8_nD1 2002.1.1 21-315,386-430 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988451 Q87L64_nD1 6055.1.1 6-40 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002988452 Q87L64_nD2 310.3.1 96-190 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002988453 Q87PW7_nD1 5050.1.1 1-240 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002988454 Q87N75_nD1 213.1.1 1-185 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988455 Q87SK2_nD1 5054.1.1 1-270 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002988456 Q87GS7_nD1 1.1.5 21-230 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988457 Q87MZ3_nD4 7510.1.1 536-680 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002988458 Q87MZ3_nD3 7510.1.1 391-535,681-714 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002988459 Q87MZ3_nD2 2493.1.1 226-355 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'a/b three-layered sandwiches' 002988460 Q87MZ3_nD1 2004.1.1 1-225,356-390 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988461 Q87RY0_nD1 221.1.1 6-95 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988462 Q87QI8_nD3 107.1.1 326-390 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002988463 Q87QI8_nD1 139.1.1 41-185 'Cytochrome c3-like' 'Cytochrome c3-like' 'Multiheme cytochromes' 'few secondary structure elements' 002988464 Q87QI8_nD2 4.1.1 206-325 'SH3' 'SH3' 'SH3' 'beta barrels' 002988465 Q87NQ2_nD1 312.1.1 6-138 'HIT-related' 'HIT-related' 'HIT-like' 'a+b three layers' 002988466 Q87HG0_nD3 304.6.1 271-325,356-560 'FAD-linked oxidases, C-terminal domain' 'FAD-linked oxidases, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002988467 Q87HG0_nD2 316.1.1 331-355 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002988468 Q87HG0_nD1 217.1.1 6-270 'FAD-binding domain' 'FAD-binding domain' 'FAD-binding domain-like' 'a+b complex topology' 002988469 Q87LM1_nD1 857.1.1 6-95 'Cell division protein ZapA-like' 'Cell division protein ZapA-like' 'Cell division protein ZapA-like' 'a+b duplicates or obligate multimers' 002988470 Q87PD9_nD2 10.2.1 146-275 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'jelly-roll' 'beta sandwiches' 002988471 Q87PD9_nD1 10.2.1 1-145 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'jelly-roll' 'beta sandwiches' 002988472 Q87JN9_nD1 208.1.1 1-180 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002988473 Q87KK3_nD1 7579.1.1 6-335 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002988474 Q87FH6_nD1 5059.1.1 6-35 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002988475 Q87FH6_nD2 6155.1.1 46-160 'SWEET transporter' 'SWEET transporter' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002988476 Q87GU5_nD7 2007.1.3 721-855 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988477 Q87GU5_nD3 4168.1.1 301-355 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988478 Q87GU5_nD4 223.1.1 356-470 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988479 Q87GU5_nD6 225.1.1 546-720 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002988480 Q87GU5_nD1 605.1.1 16-50,271-300 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002988481 Q87GU5_nD2 223.1.1 51-270 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988482 Q87GU5_nD5 622.4.1 471-545 'Mite allergen Der p 5-related' 'Mite allergen Der p 5-related' 'YvfG-like' 'alpha bundles' 002988483 Q87PF2_nD1 4100.1.1 1-65 'TTHA1013/TTHA0281-like' 'TTHA1013/TTHA0281-like' 'TTHA1013/TTHA0281-like' 'a+b duplicates or obligate multimers' 002988484 Q87JX7_nD1 274.1.1 81-234 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002988485 Q87MW0_nD1 7524.1.1 1-210 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988486 Q87MW0_nD2 7524.1.1 211-445 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988487 Q87MW0_nD4 4002.1.1 641-865 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002988488 Q87MW0_nD3 2007.1.7 456-640 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988489 Q87I81_nD2 5060.2.1 111-225 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002988490 Q87I81_nD1 1075.4.1 56-110 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988491 Q87I81_nD3 5042.1.1 226-285 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'extended segments' 002988492 Q87T02_nD1 4.1.1 1-105 'SH3' 'SH3' 'SH3' 'beta barrels' 002988493 Q87PE2_nD1 213.1.1 1-120 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988494 Q87RR6_nD1 2002.1.1 1-480 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988495 Q87RR6_nD2 12.1.1 481-560 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002988496 Q87MR7_nD1 7515.1.1 21-525 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002988497 Q87QM1_nD2 602.1.1 126-370 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'alpha arrays' 002988498 Q87QM1_nD1 4952.1.1 21-120 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'alpha arrays' 002988499 Q87QM1_nD3 4953.1.1 371-455 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002988500 Q87FL4_nD2 101.1.2 131-230 'winged' 'HTH' 'HTH' 'alpha arrays' 002988501 Q87FL4_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988502 Q87G54_nD1 209.1.1 31-188 'C-type lectin-like' 'C-type lectin-like' 'C-type lectin-like' 'a+b complex topology' 002988503 Q87KM3_nD1 304.4.1 81-180 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002988504 Q87KM3_nD2 1075.1.2 26-75,186-320 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988505 Q87SF2_nD1 3843.1.1 11-115 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'alpha complex topology' 002988506 Q87KD0_nD1 11.1.1 101-210 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988507 Q87J33_nD1 101.1.1 6-65 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988508 Q87J33_nD2 191.1.1 66-150 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002988509 Q87K86_nD1 7011.1.1 6-355 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002988510 Q87R62_nD1 3236.1.1 1-305 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002988511 Q87FK1_nD2 101.1.1 176-220 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988512 Q87FK1_nD1 10.12.1 6-175 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002988513 Q87FK1_nD3 101.1.1 221-275 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988514 Q87LM3_nD1 635.1.1 6-180 'YgfB-like' 'YgfB-like' 'YgfB-like' 'alpha arrays' 002988515 Q87RD6_nD1 310.1.1 1-105 'Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain' 'Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002988516 Q87RD6_nD2 2005.1.1 111-370 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988517 Q87RD6_nD3 140.1.1 371-575 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002988518 Q87LX2_nD1 11.1.5 1-125 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988519 Q87LX2_nD2 2498.2.1 126-260 'beta-N-acetylhexosaminidase-like domain' 'beta-N-acetylhexosaminidase-like domain' 'Zincin-like' 'mixed a+b and a/b' 002988520 Q87LX2_nD3 2002.1.1 261-635 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988521 Q87N12_nD1 2007.2.2 1-149 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988522 Q87RP2_nD1 2003.1.2 1-390 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988523 Q87JD0_nD1 2484.4.1 1-110 'Nitrogenase accessory factor-like' 'Nitrogenase accessory factor-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988524 Q87M31_nD2 7523.1.1 91-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988525 Q87M31_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002988526 Q87G69_nD1 4333.1.1 27-55 'DNA methylase specificity domain' 'DNA methylase specificity domain' 'DNA methylase specificity domain' 'a+b complex topology' 002988527 Q87SD5_nD2 101.1.2 126-235 'winged' 'HTH' 'HTH' 'alpha arrays' 002988528 Q87SD5_nD1 2007.1.3 1-120 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988529 Q87G18_nD1 2002.1.1 1-379 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988530 Q87FV8_nD1 6028.1.1 21-80 'Ribosome modulation factor' 'Ribosome modulation factor' 'Ribosome modulation factor' 'alpha bundles' 002988531 Q87FV8_nD2 192.7.1 86-160 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002988532 Q87QN6_nD1 2002.1.1 6-345 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988533 Q79YX1_nD1 2007.1.3 1-125 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988534 Q87ST6_nD2 102.2.1 201-265 'H2TH' 'H2TH' 'HhH/H2TH' 'alpha arrays' 002988535 Q87ST6_nD1 2003.1.5 6-200 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988536 Q87IQ8_nD1 301.3.1 61-208 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002988537 Q87JZ8_nD1 247.1.1 26-370 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002988538 Q87G50_nD1 5.1.4 16-660 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002988539 Q87KZ3_nD1 504.1.1 11-150 'Bacterial protein-export protein SecB' 'Bacterial protein-export protein SecB' 'Bacterial protein-export protein SecB' 'a+b two layers' 002988540 Q87J86_nD2 7523.1.1 131-250,321-344 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988541 Q87J86_nD1 7523.1.1 16-130,251-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988542 Q87S73_nD2 2004.1.1 251-555 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988543 Q87S73_nD1 2004.1.1 1-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988544 Q87HQ5_nD1 4120.1.1 6-100 'Tim10/DDP' 'Tim10/DDP' 'Tim10/DDP' 'few secondary structure elements' 002988545 Q87P89_nD1 1.1.9 1-70 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988546 Q87P89_nD2 2003.1.5 71-395 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988547 Q87NF0_nD1 3719.1.1 31-335 'Imelysin peptidase-like' 'Imelysin peptidase-like' 'Imelysin peptidase-like' 'alpha bundles' 002988548 Q87KH1_nD1 331.4.1 6-100 'Kinase associated domain 1, KA1' 'Kinase associated domain 1, KA1' 'TBP-like' 'a+b two layers' 002988549 Q87KL7_nD1 101.1.2 6-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002988550 Q87SQ5_nD5 101.1.1 591-635 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988551 Q87SQ5_nD2 223.1.1 226-325 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988552 Q87SQ5_nD1 223.1.1 6-205 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988553 Q87SQ5_nD4 148.1.3 511-590 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988554 Q87SQ5_nD3 2004.1.1 326-510 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988555 Q87MY1_nD1 7541.1.1 6-165 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'a/b three-layered sandwiches' 002988556 Q87I06_nD1 109.4.1 61-105 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002988557 Q87I06_nD2 2004.1.1 1-60,106-413 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988558 Q87FZ1_nD1 5059.1.1 6-300 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002988559 Q87S44_nD1 2485.1.1 1-195 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002988560 Q87SA1_nD1 1037.1.1 6-265 'Prolipoprotein diacylglyceryl transferase' 'Prolipoprotein diacylglyceryl transferase' 'Prolipoprotein diacylglyceryl transferase' 'alpha bundles' 002988561 Q87P23_nD3 3261.1.1 226-290 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002988562 Q87P23_nD4 3261.1.1 296-365 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002988563 Q87P23_nD2 3261.1.1 166-225 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002988564 Q87P23_nD5 3454.1.1 366-420 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002988565 Q87P23_nD1 73.1.1 1-100 'SMAD/FHA domain' 'SMAD/FHA domain' 'SMAD/FHA domain' 'beta sandwiches' 002988566 Q87QZ0_nD1 5084.5.1 46-359 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988567 Q87R51_nD1 101.1.2 1-55 'winged' 'HTH' 'HTH' 'alpha arrays' 002988568 Q87R51_nD2 304.4.1 61-150 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002988569 Q87KT2_nD1 101.1.9 1-110 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002988570 Q87RN2_nD1 601.4.1 1-120 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002988571 Q87P74_nD4 327.5.1 506-634 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988572 Q87P74_nD3 4011.1.1 416-505 'beta-barrel domain in acetyl-CoA synthetase-like proteins' 'beta-barrel domain in acetyl-CoA synthetase-like proteins' 'beta-barrel domain in acetyl-CoA synthetase-like proteins' 'beta barrels' 002988573 Q87P74_nD1 7584.1.1 11-240 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002988574 Q87P74_nD2 7584.1.1 241-430 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002988575 Q87RX0_nD1 274.1.1 41-143 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002988576 Q87FZ0_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002988577 Q87FZ0_nD2 7523.1.1 86-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988578 Q87SD0_nD1 7531.1.1 1-295 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002988579 Q87SD0_nD2 304.8.1 311-395 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002988580 Q87SD0_nD5 298.1.1 616-795 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002988581 Q87SD0_nD3 304.8.1 396-460 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002988582 Q87SD0_nD4 2003.1.1 461-615,796-815 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988583 Q87ML8_nD1 5084.5.4 31-439 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988584 Q87QF3_nD1 7523.1.1 26-155,306-355 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988585 Q87QF3_nD2 7523.1.1 156-305,361-385 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988586 Q87KY3_nD1 221.1.1 6-105 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988587 Q87KY3_nD2 187.1.1 106-245 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002988588 Q87N25_nD3 3374.1.1 191-338 'spore cortex-lytic enzyme catalytic domain' 'spore cortex-lytic enzyme catalytic domain' 'spore cortex-lytic enzyme catalytic domain' 'a+b complex topology' 002988589 Q87N25_nD1 3536.1.1 6-110 'Lmo1499 protein N-terminal domains' 'Lmo1499 protein N-terminal domains' 'Lmo1499 protein N-terminal domains' 'a+b complex topology' 002988590 Q87N25_nD2 3536.1.1 111-190 'Lmo1499 protein N-terminal domains' 'Lmo1499 protein N-terminal domains' 'Lmo1499 protein N-terminal domains' 'a+b complex topology' 002988591 Q87IY9_nD1 2004.1.1 1-523 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988592 Q87LJ9_nD1 2484.1.1 1-140 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002988593 Q87M08_nD1 101.1.2 6-135 'winged' 'HTH' 'HTH' 'alpha arrays' 002988594 Q87ML1_nD1 6055.1.1 16-40 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002988595 Q87HI6_nD1 213.1.1 1-169 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988596 Q87PA7_nD3 375.1.1 216-245 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988597 Q87PA7_nD4 633.23.1 246-405 'Claudin' 'Claudin' 'Bromodomain-like' 'alpha bundles' 002988598 Q87PA7_nD2 633.23.1 51-215 'Claudin' 'Claudin' 'Bromodomain-like' 'alpha bundles' 002988599 Q87PA7_nD1 375.1.1 11-50 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988600 Q87KC0_nD2 3010.1.1 101-180 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'a/b three-layered sandwiches' 002988601 Q87KC0_nD1 212.1.1 1-100 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002988602 Q87KC0_nD4 148.1.3 426-500 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988603 Q87KC0_nD3 2004.1.1 186-420 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988604 Q87P54_nD1 3846.1.1 66-120 'IcmR' 'IcmR' 'IcmR' 'alpha bundles' 002988605 Q87II0_nD1 2003.1.1 1-230 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988606 Q87KK0_nD3 9.1.1 236-340 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002988607 Q87KK0_nD4 5.1.4 361-500 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002988608 Q87KK0_nD2 9.1.1 141-230 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002988609 Q87KK0_nD1 2.20.1 36-140 'NlpE C-terminal domain' 'NlpE C-terminal domain' 'OB-fold' 'beta barrels' 002988610 Q87R43_nD1 205.1.1 1-105 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002988611 Q87GY4_nD1 7574.1.1 1-330 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002988612 Q87GY4_nD2 7574.1.1 331-525 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002988613 Q87GY4_nD3 7522.1.1 526-663 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'a/b three-layered sandwiches' 002988614 Q87JZ4_nD1 211.1.1 6-80 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988615 Q87JZ4_nD2 211.1.1 81-135 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988616 Q87RJ6_nD1 5076.2.1 6-55,76-245 'Putative sulfate permease CysZ' 'Putative sulfate permease CysZ' 'Mitochondrial ADP/ATP carrier-like' 'alpha complex topology' 002988617 Q87QE2_nD2 805.1.1 366-550 '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' 'a+b complex topology' 002988618 Q87QE2_nD1 246.2.1 26-365 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002988619 Q87RT0_nD1 2006.1.4 1-165 'PIN domain-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002988620 Q87RT0_nD2 102.1.1 166-260 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002988621 Q87KC6_nD1 3094.1.1 6-88 'Uncharacterized protein yihD' 'Uncharacterized protein yihD' 'Uncharacterized protein yihD' 'alpha arrays' 002988622 Q87RH9_nD2 3928.1.1 36-60 'Cell division protein CrgA' 'Cell division protein CrgA' 'Cell division protein CrgA' 'alpha bundles' 002988623 Q87RH9_nD1 375.1.1 1-30 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988624 Q87PR0_nD2 148.1.3 6-35,311-355 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988625 Q87PR0_nD1 223.1.1 36-305 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988626 Q87PR0_nD3 304.48.1 356-510 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988627 Q87GB2_nD1 6016.1.1 31-100 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'a+b two layers' 002988628 Q87GB2_nD2 221.1.4 101-175 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988629 Q87KE7_nD1 101.1.2 1-50 'winged' 'HTH' 'HTH' 'alpha arrays' 002988630 Q87G90_nD1 2006.1.1 1-215 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002988631 Q87SD1_nD1 5084.5.1 36-159 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002988632 Q87PX1_nD1 3538.1.1 16-215 'MerF' 'MerF' 'MerF' 'extended segments' 002988633 Q87RN5_nD2 2003.1.1 161-415 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988634 Q87RN5_nD1 304.41.1 1-155 'Glutamyl tRNA-reductase catalytic, N-terminal domain' 'Glutamyl tRNA-reductase catalytic, N-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002988635 Q87LA4_nD1 3479.1.1 11-40,136-155 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002988636 Q87LA4_nD2 223.1.1 41-135 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988637 Q87LA4_nD3 304.48.1 156-645 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988638 Q87NK0_nD1 213.1.1 6-190 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988639 Q87P09_nD1 2003.1.7 1-238 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988640 Q87H82_nD1 2003.6.1 1-300 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002988641 Q87S81_nD1 2007.6.1 6-230 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988642 Q87S81_nD2 103.13.1 231-305 'C-terminal lid domain of glucokinase regulatory protein' 'C-terminal lid domain of glucokinase regulatory protein' 'RuvA-C' 'alpha arrays' 002988643 Q87Q79_nD2 3447.1.1 36-153 'Isoprenylcysteine carboxyl methyltransferase (ICMT)' 'Isoprenylcysteine carboxyl methyltransferase (ICMT)' 'Isoprenylcysteine carboxyl methyltransferase (ICMT)' 'alpha bundles' 002988644 Q87Q79_nD1 3928.1.1 11-35 'Cell division protein CrgA' 'Cell division protein CrgA' 'Cell division protein CrgA' 'alpha bundles' 002988645 Q87SI2_nD2 66.1.1 46-190 'ISP domain' 'ISP domain' 'ISP domain' 'beta sandwiches' 002988646 Q87SI2_nD1 5014.1.1 11-45 'iron-sulfur subunit (ISP) transmembrane anchor' 'iron-sulfur subunit (ISP) transmembrane anchor' 'iron-sulfur subunit (ISP) transmembrane anchor' 'extended segments' 002988647 Q87MV6_nD1 3355.1.1 6-460 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002988648 Q87G33_nD2 5050.1.1 201-390 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002988649 Q87G33_nD1 5050.1.1 6-195 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002988650 Q87NU7_nD2 3016.1.1 321-423 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002988651 Q87NU7_nD1 7577.1.1 6-320 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002988652 Q87H28_nD2 5069.1.1 176-445 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002988653 Q87H28_nD1 5069.1.1 1-175 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002988654 Q87MB7_nD2 601.19.1 81-225 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002988655 Q87MB7_nD1 833.1.1 26-80,226-245 'Pepsin inhibitor-3' 'Pepsin inhibitor-3' 'Pepsin inhibitor-3' 'a+b duplicates or obligate multimers' 002988656 Q87ME4_nD2 4070.1.1 6-120,336-450 'FtsH protease domain-like' 'FtsH protease domain-like' 'FtsH protease domain-like' 'alpha arrays' 002988657 Q87ME4_nD1 7.1.1 126-220,311-320 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002988658 Q87ME4_nD3 7.1.1 221-310 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002988659 Q79YX8_nD2 3812.1.1 31-114 'Type III secretion protein YscE' 'Type III secretion protein YscE' 'Type III secretion protein YscE' 'alpha bundles' 002988660 Q79YX8_nD1 3415.1.1 6-30 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002988661 Q87RB2_nD1 71.1.1 31-203 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002988662 Q87HP8_nD1 2005.1.1 1-129 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988663 Q87FJ7_nD1 101.1.2 11-150 'winged' 'HTH' 'HTH' 'alpha arrays' 002988664 Q87LM7_nD1 299.1.1 21-170 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'a+b complex topology' 002988665 Q87KT3_nD2 7503.1.1 201-320 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002988666 Q87KT3_nD1 101.1.2 1-110 'winged' 'HTH' 'HTH' 'alpha arrays' 002988667 Q87KT3_nD3 109.4.1 321-515 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002988668 Q87LH7_nD1 604.10.1 6-100 'Enzyme IIa from lactose specific PTS, IIa-lac' 'Enzyme IIa from lactose specific PTS, IIa-lac' 'Spectrin repeat-like' 'alpha bundles' 002988669 Q87FF3_nD3 7524.1.1 531-810 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988670 Q87FF3_nD4 7524.1.1 811-1030 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988671 Q87FF3_nD2 2002.1.1 1-65,186-525 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988672 Q87FF3_nD1 503.1.1 66-185 'N-terminal domain of bifunctional PutA protein' 'N-terminal domain of bifunctional PutA protein' 'N-terminal domain of bifunctional PutA protein' 'extended segments' 002988673 Q87LI7_nD1 2003.1.5 11-239 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988674 Q87MS6_nD1 109.4.1 26-270 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002988675 Q87FK2_nD1 12.3.1 11-170 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002988676 Q87S58_nD1 205.1.1 1-84 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002988677 Q87P38_nD2 5086.1.1 121-155,181-255,291-430,481-490 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002988678 Q87P38_nD1 108.1.1 56-120 'EF-hand' 'EF-hand-related' 'EF-hand' 'alpha arrays' 002988679 Q87P38_nD3 UNASSIGNED 431-480 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002988680 Q87HL9_nD6 304.28.2 731-835 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988681 Q87HL9_nD2 304.28.2 191-270 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988682 Q87HL9_nD5 304.28.1 566-685 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988683 Q87HL9_nD8 5067.1.1 511-565,911-1100 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988684 Q87HL9_nD7 304.28.1 686-730,836-910 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988685 Q87HL9_nD1 304.28.1 46-140 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988686 Q87HL9_nD3 304.28.1 141-190,271-340 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988687 Q87HL9_nD4 5067.1.1 1-45,341-505 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988688 Q87HW7_nD4 131.1.1 376-580 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002988689 Q87HW7_nD3 6055.1.1 341-375 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002988690 Q87HW7_nD1 2007.1.2 31-150,276-305 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988691 Q87HW7_nD2 2007.1.2 151-275,306-340 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988692 Q87S48_nD1 2004.1.1 16-270 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988693 Q87SE6_nD1 601.1.1 16-310 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002988694 Q87L59_nD2 2485.1.1 171-240 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002988695 Q87L59_nD1 2485.1.1 1-165 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002988696 Q87RH8_nD1 246.2.1 1-180 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002988697 Q87TC7_nD1 3173.1.1 21-220 'Colicin M-related' 'Colicin M-related' 'Colicin M-related' 'a+b complex topology' 002988698 Q87TC7_nD2 3173.1.1 221-245 'Colicin M-related' 'Colicin M-related' 'Colicin M-related' 'a+b complex topology' 002988699 Q87M13_nD1 268.1.1 6-160 'Sterol carrier protein, SCP-related' 'Sterol carrier protein, SCP-related' 'Sterol carrier protein-like' 'a+b two layers' 002988700 Q87FP1_nD1 109.4.1 6-345 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002988701 Q87IK1_nD1 241.2.1 11-130 'Frataxin-like' 'Frataxin-like' 'Type III secretory system chaperone-like' 'a+b two layers' 002988702 Q87RG2_nD1 2007.2.1 1-170 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988703 Q87LG3_nD1 10.1.2 1-160 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002988704 Q87LG3_nD2 11.1.1 161-260 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988705 Q87GT7_nD1 2003.1.1 1-135,271-295 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988706 Q87GT7_nD2 298.1.1 136-270,296-325 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002988707 Q87JZ2_nD2 10.18.1 201-435 'VPA0735-like' 'VPA0735-like' 'jelly-roll' 'beta sandwiches' 002988708 Q87JZ2_nD1 10.18.1 13-195 'VPA0735-like' 'VPA0735-like' 'jelly-roll' 'beta sandwiches' 002988709 Q87Q59_nD2 2.1.1 41-150 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988710 Q87Q59_nD5 314.1.1 491-700 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002988711 Q87Q59_nD1 101.1.9 1-40,151-190 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002988712 Q87Q59_nD6 304.18.1 706-800 'Anticodon-binding domain of PheRS' 'Anticodon-binding domain of PheRS' 'Alpha-beta plaits' 'a+b two layers' 002988713 Q87Q59_nD3 865.1.1 191-400 'PheT/TilS domain' 'PheT/TilS domain' 'PheT/TilS domain' 'beta complex topology' 002988714 Q87Q59_nD4 101.1.9 401-475 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002988715 Q87IE1_nD1 6074.1.1 86-120 'Transmembrane helix of E1 envelope glycoprotein' 'Transmembrane helix of E1 envelope glycoprotein' 'Transmembrane helix of E1 envelope glycoprotein' 'extended segments' 002988716 Q87GG5_nD1 73.1.1 1-90 'SMAD/FHA domain' 'SMAD/FHA domain' 'SMAD/FHA domain' 'beta sandwiches' 002988717 Q87GG5_nD2 5005.1.1 96-145 'Mitochondrial cytochrome c oxidase subunit VIc' 'Mitochondrial cytochrome c oxidase subunit VIc' 'Mitochondrial cytochrome c oxidase subunit VIc' 'extended segments' 002988718 Q87GG5_nD5 3454.1.1 271-335 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002988719 Q87GG5_nD3 327.16.1 186-215 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988720 Q87GG5_nD4 327.16.1 216-260 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002988721 Q87KU1_nD1 2002.1.1 1-320 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988722 Q87MZ9_nD3 12.1.1 526-608 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002988723 Q87MZ9_nD1 11.1.1 1-110 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988724 Q87MZ9_nD2 2002.1.1 111-525 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988725 Q87MA7_nD1 UNASSIGNED 1-35 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002988726 Q87MA7_nD2 5049.1.3 41-405 'Na(+)-translocating NADH-quinone reductase subunit B' 'Ammonium transporter-related' 'Ammonium transporter-related' 'alpha complex topology' 002988727 Q87J23_nD1 150.2.1 1-175 'Cobalamin adenosyltransferase' 'Cobalamin adenosyltransferase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002988728 Q87IB4_nD1 101.1.2 1-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002988729 Q87IB4_nD2 7523.1.1 96-309 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988730 Q87JP5_nD2 182.1.1 186-433 'Cryptochrome/photolyase FAD-binding domain' 'Cryptochrome/photolyase FAD-binding domain-related' 'Cryptochrome/photolyase FAD-binding domain-related' 'alpha complex topology' 002988731 Q87JP5_nD1 2005.1.1 1-185 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988732 Q87NS1_nD1 301.7.1 1-123 'YjgF-like' 'YjgF-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002988733 Q87P47_nD2 1.1.10 171-235 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988734 Q87P47_nD1 866.1.1 21-165 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002988735 Q87P47_nD3 1.1.10 246-320 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988736 Q87Q30_nD1 7516.1.1 1-238 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002988737 Q87LJ1_nD1 7504.1.1 1-195 'ITPase-like' 'ITPase-like' 'ITPase-like' 'a/b three-layered sandwiches' 002988738 Q87P39_nD1 3711.1.1 6-30 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'alpha bundles' 002988739 Q87P39_nD2 2007.2.1 31-210 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988740 Q87LP8_nD2 159.1.1 131-263 'Hypothetical protein AF_0060' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002988741 Q87LP8_nD1 159.1.1 1-130 'Hypothetical protein AF_0060' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002988742 Q87RX4_nD1 5052.1.1 6-415 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'alpha complex topology' 002988743 Q87LA1_nD1 7516.1.1 1-285 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002988744 Q87GT8_nD2 1075.5.1 236-455 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988745 Q87GT8_nD1 1075.5.1 21-235 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988746 Q87Q80_nD2 304.6.1 276-550 'FAD-linked oxidases, C-terminal domain' 'FAD-linked oxidases, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002988747 Q87Q80_nD5 2007.1.5 701-720,751-895 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988748 Q87Q80_nD1 217.1.1 11-275 'FAD-binding domain' 'FAD-binding domain' 'FAD-binding domain-like' 'a+b complex topology' 002988749 Q87Q80_nD6 2007.1.5 896-1010 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988750 Q87Q80_nD3 187.1.1 551-700 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002988751 Q87Q80_nD4 7579.1.1 721-750 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002988752 Q87Q23_nD1 101.1.4 6-70 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002988753 Q87Q23_nD2 101.1.2 71-250 'winged' 'HTH' 'HTH' 'alpha arrays' 002988754 Q87PA1_nD1 2002.1.1 6-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988755 Q87RW4_nD1 3355.1.1 21-515 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002988756 Q87NB5_nD1 297.1.1 1-205 'YrdC/RibB' 'YrdC/RibB' 'YrdC/RibB' 'a+b complex topology' 002988757 Q87ME1_nD1 7534.1.1 6-245 'Undecaprenyl diphosphate synthase' 'Undecaprenyl diphosphate synthase' 'Undecaprenyl diphosphate synthase' 'a/b three-layered sandwiches' 002988758 Q87PM7_nD1 6016.1.1 31-100 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'a+b two layers' 002988759 Q87PM7_nD4 221.1.4 296-390 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988760 Q87PM7_nD3 221.1.4 211-290 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988761 Q87PM7_nD8 6017.1.1 671-695 'Transmembrane helix of outer membrane lipoprotein Wza' 'Transmembrane helix of outer membrane lipoprotein Wza' 'Transmembrane helix of outer membrane lipoprotein Wza' 'extended segments' 002988762 Q87PM7_nD5 221.1.4 396-475 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988763 Q87PM7_nD2 221.1.4 101-180 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988764 Q87PM7_nD6 221.1.4 491-575 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988765 Q87PM7_nD7 221.1.4 586-670 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988766 Q87PA4_nD3 2.1.1 136-210 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988767 Q87PA4_nD4 101.1.2 216-275 'winged' 'HTH' 'HTH' 'alpha arrays' 002988768 Q87PA4_nD1 2.1.1 1-65 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988769 Q87PA4_nD2 2.1.1 66-135 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988770 Q87Q94_nD1 3355.1.1 16-455 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002988771 Q87IL4_nD1 2006.1.5 6-275 'Arginase/deacetylase' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002988772 Q87I44_nD1 3355.1.1 1-465 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002988773 Q87KQ7_nD1 221.4.1 11-100 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002988774 Q87KQ7_nD2 375.1.1 101-130 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988775 Q87KQ7_nD3 221.4.1 131-255 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002988776 Q87IR3_nD1 5069.1.1 1-325 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002988777 Q877Q6_nD1 3506.1.1 6-60 'Viral membrane protein P3' 'Viral membrane protein P3' 'Viral membrane protein P3' 'extended segments' 002988778 Q87FT0_nD3 11.1.1 316-410 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988779 Q87FT0_nD4 64.3.1 426-485 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002988780 Q87FT0_nD2 3019.1.1 211-310 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002988781 Q87FT0_nD1 11.1.1 26-210 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988782 Q87LH1_nD1 3567.1.1 6-155 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002988783 Q87LX0_nD3 7528.1.1 266-380 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002988784 Q87LX0_nD4 331.2.1 381-470 'Phosphoglucomutase, C-terminal domain' 'Phosphoglucomutase, C-terminal domain' 'TBP-like' 'a+b two layers' 002988785 Q87LX0_nD2 7528.1.1 161-265 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002988786 Q87LX0_nD1 7528.1.1 1-160 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002988787 Q87S90_nD1 2005.1.1 6-180,426-480,531-600 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002988788 Q87S90_nD6 3008.1.1 806-900 'A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'a+b three layers' 002988789 Q87S90_nD2 375.1.1 181-205,406-425 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988790 Q87S90_nD5 140.1.1 621-800 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002988791 Q87S90_nD7 377.1.3 901-935 'Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002988792 Q87S90_nD3 1.1.1 206-405 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988793 Q87S90_nD4 375.1.1 481-530 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002988794 Q87J96_nD1 10.1.2 1-190 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002988795 Q87J96_nD2 11.1.1 191-285 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988796 Q87J96_nD5 11.1.1 731-800 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988797 Q87J96_nD3 2002.1.1 286-630 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988798 Q87J96_nD4 11.1.1 631-730 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988799 Q87QY9_nD1 11.29.1 31-165 'PUD homologs' 'PUD homologs' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988800 Q87QY9_nD2 4009.1.1 191-215 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha bundles' 002988801 Q87TB7_nD1 3922.1.1 26-70 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002988802 Q87TB7_nD2 192.8.1 71-125 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002988803 Q87FE5_nD1 219.1.1 27-215 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002988804 Q87K08_nD1 3538.1.1 6-194 'MerF' 'MerF' 'MerF' 'extended segments' 002988805 Q87H33_nD1 618.1.1 1-55,81-108 'DNA mimic protein DMP12-related' 'DNA mimic protein DMP12-related' 'DNA mimic protein DMP12-like' 'a+b complex topology' 002988806 Q87LP5_nD2 2003.1.5 81-439 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988807 Q87LP5_nD1 2.1.1 1-80 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988808 Q87S59_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002988809 Q87SQ4_nD1 3931.1.1 1-175 'MtlR-like' 'MtlR-like' 'MtlR-like' 'alpha bundles' 002988810 Q87J95_nD2 101.1.3 146-215 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002988811 Q87J95_nD1 2007.1.3 1-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988812 Q87T68_nD1 282.1.1 1-115 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002988813 Q87T68_nD2 7516.1.1 116-350 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002988814 Q87MF9_nD1 235.1.1 67-275 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002988815 Q87MF9_nD5 101.15.1 466-528 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002988816 Q87MF9_nD2 101.15.1 276-340 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002988817 Q87MF9_nD4 101.15.1 391-465 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002988818 Q87MF9_nD3 101.15.1 341-390 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002988819 Q87NL4_nD1 4020.1.1 6-105 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b two layers' 002988820 Q87R19_nD3 1075.1.2 6-55,261-414 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988821 Q87R19_nD2 1.1.2 101-220 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988822 Q87R19_nD1 304.128.1 56-100,221-260 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002988823 Q87N06_nD2 601.19.1 26-135 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002988824 Q87N06_nD1 601.4.1 1-25 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002988825 Q87N06_nD3 601.4.1 146-255 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002988826 Q87QL1_nD1 7524.1.1 21-230,381-390 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988827 Q87QL1_nD2 7524.1.1 231-380 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988828 Q87QL1_nD3 7524.1.1 391-425 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002988829 Q87QS5_nD1 622.4.1 21-129 'Mite allergen Der p 5-related' 'Mite allergen Der p 5-related' 'YvfG-like' 'alpha bundles' 002988830 Q87PG0_nD1 6055.1.1 6-35 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002988831 Q87IX5_nD6 2.1.1 496-570 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988832 Q87IX5_nD1 6119.1.1 166-210 'Helical bundle domain in CusB' 'Helical bundle domain in CusB' 'Helical bundle domain in CusB' 'alpha bundles' 002988833 Q87IX5_nD2 325.1.7 126-165,211-250 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002988834 Q87IX5_nD5 2.1.1 416-490 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988835 Q87IX5_nD3 1.1.7 111-125,251-330 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988836 Q87IX5_nD4 1.1.7 91-110,331-410 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988837 Q87ND0_nD1 604.39.1 111-130,152-280 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002988838 Q87QG7_nD2 3016.1.1 256-395 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002988839 Q87QG7_nD1 7577.1.1 6-255 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002988840 P64128_nD1 101.1.1 11-98 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002988841 Q87FY3_nD1 192.8.1 46-115 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002988842 Q87FH2_nD1 2003.6.1 1-320 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002988843 Q87KS7_nD1 77.1.1 41-160 'Outer surface protein' 'Outer surface protein' 'open-sided beta-meander' 'beta meanders' 002988844 Q87KS7_nD2 2.1.1 161-240 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002988845 Q87IN3_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002988846 Q87IN3_nD2 7523.1.1 91-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988847 Q87IV0_nD1 1.1.7 101-165 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988848 Q87IV0_nD2 11.1.1 228-260 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988849 Q87Q07_nD1 2004.1.1 6-325 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988850 Q87KA2_nD3 1075.5.1 101-125 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988851 Q87KA2_nD1 5051.1.1 11-35 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002988852 Q87KA2_nD2 3493.1.1 36-100 'Photosystem II PsbX protein' 'Photosystem II PsbX protein' 'Photosystem II PsbX protein' 'extended segments' 002988853 Q87K46_nD1 1075.5.1 6-340 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988854 Q87MS8_nD1 7546.1.1 1-205 'Glutaminase/Asparaginase N-terminal domain' 'Glutaminase/Asparaginase N-terminal domain' 'Glutaminase/Asparaginase N-terminal domain' 'a/b three-layered sandwiches' 002988855 Q87MS8_nD2 7507.1.1 206-335 'Glutaminase/Asparaginase C-terminal domain' 'Glutaminase/Asparaginase C-terminal domain' 'Glutaminase/Asparaginase C-terminal domain' 'a/b three-layered sandwiches' 002988856 Q87M93_nD1 7577.1.1 1-330 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002988857 Q87M93_nD2 3016.1.1 316-403 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002988858 Q87MK7_nD1 192.8.1 16-135 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002988859 Q87HK6_nD3 7523.1.1 116-135,261-330,521-550 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988860 Q87HK6_nD4 7523.1.1 331-520 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988861 Q87HK6_nD2 304.136.1 136-260 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002988862 Q87HK6_nD1 101.1.2 1-115 'winged' 'HTH' 'HTH' 'alpha arrays' 002988863 P22101_nD1 2007.1.1 1-190 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988864 Q87MS1_nD2 2003.1.5 41-278 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988865 Q87MS1_nD1 4294.1.1 1-40 'Trm112p-like' 'Trm112p-like' 'Trm112p-like' 'few secondary structure elements' 002988866 Q87NX3_nD1 7558.1.1 16-310 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002988867 Q87SM8_nD1 2003.1.5 1-215 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988868 Q87R45_nD5 304.48.1 471-655 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988869 Q87R45_nD2 7523.1.1 101-185 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988870 Q87R45_nD1 7523.1.1 26-100,186-230 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988871 Q87R45_nD4 7523.1.1 336-430 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988872 Q87R45_nD3 7523.1.1 236-335,431-470 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988873 Q87TR0_nD2 7523.1.1 111-200 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988874 Q87TR0_nD1 7523.1.1 21-110,201-245 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988875 Q87NK8_nD1 620.1.1 6-169 'YfiT-like putative metal-dependent hydrolases' 'YfiT-like putative metal-dependent hydrolases' 'YfiT-like putative metal-dependent hydrolases' 'alpha bundles' 002988876 Q87HT3_nD4 106.1.1 396-420 'Globin-like' 'Globin-like' 'Globin-like' 'alpha arrays' 002988877 Q87HT3_nD3 5051.1.1 371-395 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002988878 Q87HT3_nD1 1.1.2 81-185 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988879 Q87HT3_nD6 1075.1.2 426-510,626-790 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988880 Q87HT3_nD5 1.1.2 511-625 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988881 Q87HT3_nD2 1075.1.2 1-80,191-365 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988882 Q87PJ4_nD1 2007.1.3 17-134 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988883 Q87RZ5_nD2 3016.1.1 291-420 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002988884 Q87RZ5_nD1 7577.1.1 1-290 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002988885 Q87QV7_nD1 3939.1.1 26-80 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002988886 Q87QV7_nD2 1.1.1 106-240 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988887 Q87JX9_nD1 5059.1.1 1-285 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002988888 Q87GU2_nD1 101.1.2 1-210 'winged' 'HTH' 'HTH' 'alpha arrays' 002988889 Q87M54_nD1 10.12.1 1-150 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002988890 Q87N31_nD1 5084.1.1 31-133 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002988891 Q87H92_nD1 7515.1.1 21-429 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002988892 Q87T98_nD1 304.136.1 81-185 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002988893 Q87T98_nD2 7523.1.1 31-80,186-315,541-595 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988894 Q87T98_nD3 7523.1.1 316-540 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002988895 Q87GN0_nD1 545.1.2 16-100 'Sporozoite protein UIS3 soluble domain' 'Gametocyte protein Pfg27-related' 'Gametocyte protein Pfg27-related' 'alpha bundles' 002988896 Q87LE3_nD1 2004.1.1 1-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988897 Q87RU6_nD2 1.1.7 96-195 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988898 Q87RU6_nD1 1.1.7 1-90 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988899 Q87NU0_nD1 101.1.4 1-75 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002988900 Q87NU0_nD2 10.12.1 76-185 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002988901 Q87Q13_nD2 601.7.1 71-175 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002988902 Q87Q13_nD1 3860.1.1 1-25 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002988903 Q87Q13_nD3 1075.3.1 26-70,176-425 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988904 Q87SV8_nD3 7570.1.1 311-450 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'a/b three-layered sandwiches' 002988905 Q87SV8_nD2 2004.1.1 91-310 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988906 Q87SV8_nD1 2003.1.8 1-90 'MurCD/PglD N-terminal domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002988907 Q87J98_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002988908 Q87J98_nD2 814.1.1 81-240 'Chorismate lyase' 'Chorismate lyase' 'Chorismate lyase' 'a+b two layers' 002988909 Q87QC9_nD2 139.4.1 206-405 'Outer membrane cytochrome MtrF' 'Outer membrane cytochrome MtrF' 'Multiheme cytochromes' 'few secondary structure elements' 002988910 Q87QC9_nD1 11.1.1 36-200 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988911 Q87QC9_nD4 139.4.1 571-750 'Outer membrane cytochrome MtrF' 'Outer membrane cytochrome MtrF' 'Multiheme cytochromes' 'few secondary structure elements' 002988912 Q87QC9_nD3 11.1.1 406-570 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988913 Q87N55_nD2 3110.1.1 456-555 'STT3/PglB/AglB core domain' 'STT3/PglB/AglB core domain' 'STT3/PglB/AglB core domain' 'a/b three-layered sandwiches' 002988914 Q87N55_nD1 3352.1.1 1-455 'STT3/PglB/AglB transmembrane domain' 'STT3/PglB/AglB transmembrane domain' 'STT3/PglB/AglB transmembrane domain' 'alpha bundles' 002988915 Q87JL2_nD1 213.1.1 1-135 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988916 Q87RQ8_nD3 51.1.1 286-385 'Penicillin-binding protein associated domain' 'Penicillin-binding protein associated domain' 'Penicillin-binding protein associated domain' 'beta sandwiches' 002988917 Q87RQ8_nD1 4019.1.1 61-180 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002988918 Q87RQ8_nD2 223.3.1 26-60,181-285 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002988919 Q87K10_nD1 5.1.3 6-385 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002988920 Q87JF1_nD2 211.1.1 71-129 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988921 Q87JF1_nD1 211.1.1 1-70 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002988922 Q87GU9_nD2 1.1.5 116-215 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988923 Q87GU9_nD1 1.1.5 6-115 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988924 Q87Q48_nD1 5052.1.1 1-455 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'alpha complex topology' 002988925 Q87HW2_nD1 524.2.1 1-195 'Sama2622-like' 'Sama2622-like' 'Ypt/Rab-GAP domain of gyp1p-like' 'alpha arrays' 002988926 Q87QZ2_nD1 7014.1.1 6-250 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002988927 Q87IL5_nD6 11.1.1 861-985 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988928 Q87IL5_nD1 207.2.1 21-315 'Pectin lyase-like' 'Pectin lyase-like' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002988929 Q87IL5_nD5 11.1.1 706-735,756-860 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988930 Q87IL5_nD2 11.1.1 316-430 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988931 Q87IL5_nD4 11.1.1 551-705,736-755 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988932 Q87IL5_nD3 11.1.1 431-550 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988933 Q87N86_nD4 1.1.7 26-40,231-350 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002988934 Q87N86_nD3 5086.1.1 81-195 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002988935 Q87N86_nD2 325.1.7 41-80,196-230 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002988936 Q87N86_nD1 5086.1.1 1-25 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002988937 Q87NA2_nD1 3148.1.1 16-125 'putative secreted protein PA3611' 'putative secreted protein PA3611' 'putative secreted protein PA3611' 'a+b two layers' 002988938 Q87JA2_nD1 1075.3.1 6-255 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988939 Q87GD2_nD1 3567.1.1 21-80 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002988940 Q87MA6_nD2 4335.1.1 101-260 'Nqo1 FMN-binding domain-like' 'Nqo1 FMN-binding domain-like' 'Nqo1 FMN-binding domain-like' 'a/b three-layered sandwiches' 002988941 Q87MA6_nD1 325.1.7 6-100 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002988942 Q87MA6_nD3 221.1.4 261-325 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002988943 Q87MA6_nD4 187.1.1 366-445 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002988944 Q87MJ1_nD1 4085.1.1 11-80 'RbcX-like' 'RbcX-like' 'RbcX-like' 'alpha arrays' 002988945 Q87H69_nD1 7503.1.1 21-170 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002988946 Q87J51_nD1 632.7.1 1-79 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002988947 Q87KN7_nD1 5059.1.1 6-110 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002988948 Q87IG7_nD1 1075.3.1 6-115,136-215 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002988949 Q87IS0_nD3 107.1.1 276-380 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002988950 Q87IS0_nD2 3156.1.1 116-270 'Cupredoxin-related' 'Cupredoxin-related' 'Cupredoxin-like' 'beta sandwiches' 002988951 Q87IS0_nD1 5040.1.1 21-115 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'extended segments' 002988952 Q87SD2_nD1 2487.1.1 1-160 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002988953 Q87FE4_nD4 2002.5.1 406-635 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002988954 Q87FE4_nD3 304.48.1 231-405 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988955 Q87FE4_nD2 4168.1.1 166-230 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002988956 Q87FE4_nD1 223.8.1 6-160 'LapD periplasmic domain' 'LapD periplasmic domain' 'Profilin-like' 'a+b three layers' 002988957 Q87G13_nD5 11.1.4 711-795 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988958 Q87G13_nD2 11.1.1 246-325 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988959 Q87G13_nD1 4212.1.1 41-125 'FimD N-terminal domain-like' 'FimD N-terminal domain-like' 'FimD N-terminal domain-like' 'beta barrels' 002988960 Q87G13_nD4 11.1.4 631-710 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002988961 Q87G13_nD3 5084.8.1 131-245,326-630 'Usher PapC translocation pore' 'Usher PapC translocation pore' 'Outer membrane meander beta-barrels' 'beta barrels' 002988962 Q87LP2_nD1 2002.1.1 1-240 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002988963 Q87S84_nD1 5051.1.1 6-480 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002988964 Q87H58_nD1 106.1.1 1-140 'Globin-like' 'Globin-like' 'Globin-like' 'alpha arrays' 002988965 Q87KS3_nD2 148.1.3 251-445 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988966 Q87KS3_nD1 2004.1.1 6-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988967 Q87LY6_nD7 304.28.1 661-705,796-850 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988968 Q87LY6_nD6 304.28.2 706-795 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988969 Q87LY6_nD2 304.28.2 181-265 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988970 Q87LY6_nD5 304.28.1 561-660 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988971 Q87LY6_nD8 5067.1.1 516-560,851-1040 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988972 Q87LY6_nD3 304.28.1 136-180,266-325 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988973 Q87LY6_nD4 5067.1.1 1-40,326-510 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002988974 Q87LY6_nD1 304.28.1 41-130 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002988975 Q87GC3_nD2 148.1.3 6-15,196-305 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002988976 Q87GC3_nD1 2004.1.1 16-195,306-315 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002988977 Q87PG1_nD3 107.1.1 206-295 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002988978 Q87PG1_nD1 5040.1.1 1-85 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'extended segments' 002988979 Q87PG1_nD2 107.1.1 91-205,296-320 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002988980 Q87FQ4_nD2 1188.1.1 91-140,216-245,266-300 'ZIP zinc transporter' 'ZIP zinc transporter' 'ZIP zinc transporter' 'alpha bundles' 002988981 Q87FQ4_nD1 7014.1.1 1-90,146-215 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002988982 Q87PS6_nD1 2007.1.7 1-195 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988983 Q87PS6_nD2 4002.1.1 196-395 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002988984 Q87R25_nD1 213.1.1 6-180 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002988985 Q87N23_nD2 7581.1.1 256-415 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002988986 Q87N23_nD1 7581.1.1 6-255 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002988987 Q87L46_nD1 101.32.1 1-55 'bacterioferritin-associated ferredoxin' 'bacterioferritin-associated ferredoxin' 'HTH' 'alpha arrays' 002988988 Q87HT5_nD1 2007.5.1 21-200 'SGNH hydrolase' 'SGNH hydrolase' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002988989 Q87TP5_nD1 1008.1.1 11-85 'BRCC36 C-terminal helical domain' 'BRCC36 C-terminal helical domain' 'BRCC36 C-terminal helical domain' 'alpha bundles' 002988990 Q87KD8_nD1 101.35.1 1-55 'DNA repair regulatory protein RecX' 'DNA repair regulatory protein RecX' 'HTH' 'alpha arrays' 002988991 Q87KD8_nD2 103.7.1 76-150 'Hypothetical protein MTH1615' 'Hypothetical protein MTH1615' 'RuvA-C' 'alpha arrays' 002988992 Q87QI5_nD1 3355.1.1 26-168,197-255,281-404 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002988993 Q87IH6_nD1 5058.1.1 11-95 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002988994 Q87IT8_nD3 2002.5.1 336-600 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002988995 Q87IT8_nD2 304.48.1 171-335 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002988996 Q87IT8_nD1 223.1.1 1-170 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002988997 Q87I07_nD1 378.1.1 13-135 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002988998 Q87I07_nD2 109.1.1 136-220 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002988999 Q87LW2_nD3 5084.5.1 431-770 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002989000 Q87LW2_nD1 2007.1.19 41-335 'FabD/lysophospholipase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989001 Q87LW2_nD2 3121.1.1 351-425 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002989002 Q87P24_nD1 192.1.1 1-80 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002989003 Q87PA2_nD1 222.1.1 1-160 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002989004 Q87Q34_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002989005 Q87Q34_nD2 7523.1.1 81-289 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989006 Q87G02_nD1 11.2.1 26-169,191-230 'C2 domain' 'C2 domain' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989007 Q87KQ5_nD9 325.1.7 1151-1215 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989008 Q87KQ5_nD7 325.1.7 946-1020 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989009 Q87KQ5_nD2 4951.1.1 376-415 'inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit' 'inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit' 'inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit' 'alpha arrays' 002989010 Q87KQ5_nD5 4958.1.1 636-790 'second helical domain in RNA-polymerase beta-prime subunit' 'second helical domain in RNA-polymerase beta-prime subunit' 'second helical domain in RNA-polymerase beta-prime subunit' 'a+b complex topology' 002989011 Q87KQ5_nD8 325.1.7 1021-1130 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989012 Q87KQ5_nD6 275.1.1 811-895 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002989013 Q87KQ5_nD10 4954.1.1 896-940,1136-1150,1216-1370 'central helical domain in RNA-polymerase beta-prime subunit' 'central helical domain in RNA-polymerase beta-prime subunit' 'central helical domain in RNA-polymerase beta-prime subunit' 'a+b complex topology' 002989014 Q87KQ5_nD3 1.1.2 346-375,416-500 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989015 Q87KQ5_nD4 4959.1.1 501-635 'first helical domain in RNA-polymerase beta-prime subunit' 'first helical domain in RNA-polymerase beta-prime subunit' 'first helical domain in RNA-polymerase beta-prime subunit' 'a+b complex topology' 002989016 Q87KQ5_nD1 4246.1.1 6-345 'N-terminal domain in RNA-polymerase beta-prime subunit' 'N-terminal domain in RNA-polymerase beta-prime subunit' 'N-terminal domain in RNA-polymerase beta-prime subunit' 'a+b complex topology' 002989017 Q87FD2_nD3 7523.1.1 161-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989018 Q87FD2_nD1 101.1.2 6-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002989019 Q87FD2_nD2 7523.1.1 81-160,271-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989020 Q87RM7_nD1 328.7.1 53-175 'Smr domain' 'Smr domain' 'IF3-like' 'a+b two layers' 002989021 Q87NV7_nD1 1075.4.1 11-150 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989022 Q87G96_nD1 2007.2.2 1-95 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989023 Q87RC2_nD1 4943.1.1 1-85 'YcgL/NE1680-like' 'YcgL/NE1680-like' 'YcgL/NE1680-like' 'a+b two layers' 002989024 Q87LI1_nD3 4.1.1 341-410 'SH3' 'SH3' 'SH3' 'beta barrels' 002989025 Q87LI1_nD1 275.1.1 1-60 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002989026 Q87LI1_nD2 131.1.1 81-360 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002989027 Q87QY5_nD1 308.1.1 6-105 'ClpS-related' 'ClpS-related' 'ClpS-like' 'a+b two layers' 002989028 Q87TF1_nD4 101.1.1 396-465 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989029 Q87TF1_nD3 148.1.3 311-390 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989030 Q87TF1_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989031 Q87TF1_nD2 2004.1.1 136-310 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989032 Q87TD8_nD3 7.1.1 211-305 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002989033 Q87TD8_nD1 4154.1.1 26-50 'E2F-DP heterodimerization region' 'E2F-DP heterodimerization region' 'E2F-DP heterodimerization region' 'beta duplicates or obligate multimers' 002989034 Q87TD8_nD2 3454.1.1 111-180 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002989035 Q87FF0_nD1 223.1.1 21-135 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989036 Q87FF0_nD2 101.1.3 136-240 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002989037 Q87L31_nD2 2003.1.1 391-590 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989038 Q87L31_nD1 3236.1.1 6-380 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002989039 Q87N65_nD3 605.1.1 326-415 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989040 Q87N65_nD4 225.1.1 416-575 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989041 Q87N65_nD1 7523.1.1 106-220 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989042 Q87N65_nD2 7523.1.1 11-105,211-325 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989043 Q87MV2_nD1 4144.1.1 6-70 'YejL-like' 'YejL-like' 'YejL-like' 'alpha duplicates or obligate multimers' 002989044 Q87HM8_nD1 1.1.1 86-215 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989045 Q87JU0_nD1 11.1.1 31-179 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989046 Q87P10_nD2 129.1.1 181-470 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002989047 Q87P10_nD1 2003.1.1 1-180 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989048 Q79YZ4_nD1 3758.2.1 6-240 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002989049 Q87JF9_nD2 375.1.1 71-110 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989050 Q87JF9_nD1 375.1.1 11-55 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989051 Q87JF9_nD3 2484.1.1 56-70,111-470 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002989052 Q87FL8_nD1 3264.1.1 13-180 'N-terminal domain of alcaligin biosynthesis protein C' 'N-terminal domain of alcaligin biosynthesis protein C' 'N-terminal domain of alcaligin biosynthesis protein C' 'a+b two layers' 002989053 Q87FL8_nD2 206.1.1 161-600 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002989054 Q87MG7_nD1 2007.6.1 6-190 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989055 Q87I25_nD1 101.3.1 1-80 'XPC-binding domain' 'XPC-binding domain' 'HTH' 'alpha arrays' 002989056 Q79YW4_nD1 230.5.1 61-165 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002989057 Q87Q20_nD2 286.1.1 146-310 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002989058 Q87Q20_nD1 286.1.1 6-145 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002989059 Q87KW3_nD1 632.19.1 6-100 'Choline binding protein A' 'Choline binding protein A' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989060 Q87LM6_nD1 6041.1.1 1-65 'DUF1107-like' 'DUF1107-like' 'DUF1107-like' 'a+b two layers' 002989061 Q87LF4_nD2 328.6.1 1-20,231-418 'EPT/RTPC-like' 'EPT/RTPC-like' 'IF3-like' 'a+b two layers' 002989062 Q87LF4_nD1 328.6.1 21-230 'EPT/RTPC-like' 'EPT/RTPC-like' 'IF3-like' 'a+b two layers' 002989063 Q87KD5_nD1 289.1.1 1-170 'Peptide deformylase' 'Peptide deformylase' 'Peptide deformylase' 'a+b complex topology' 002989064 Q87I16_nD2 243.3.1 166-330 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002989065 Q87I16_nD1 7064.1.1 1-165 'Transmembrane domain of VIT1' 'Transmembrane domain of VIT1' 'Transmembrane domain of VIT1' 'alpha bundles' 002989066 Q87GW9_nD5 3755.3.1 376-435 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989067 Q87GW9_nD2 5001.1.1 11-35,146-180 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002989068 Q87GW9_nD6 225.1.1 436-575 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989069 Q87GW9_nD1 601.4.1 41-145 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002989070 Q87GW9_nD4 223.1.1 231-375 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989071 Q87GW9_nD3 4168.1.1 181-230 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989072 Q87J56_nD3 11.1.1 201-330 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989073 Q87J56_nD1 604.12.1 31-55,91-175 'MIT domain' 'MIT domain' 'Spectrin repeat-like' 'alpha bundles' 002989074 Q87J56_nD2 3758.1.1 176-200 'Bacterial hemolysins' 'Bacterial hemolysins' 'Bacterial hemolysins-like' 'alpha bundles' 002989075 Q87RC3_nD1 2495.1.1 6-100 'Cell-division inhibitor MinC, N-terminal domain' 'Cell-division inhibitor MinC, N-terminal domain' 'Cell-division inhibitor MinC, N-terminal domain' 'a/b three-layered sandwiches' 002989076 Q87RC3_nD2 207.5.1 111-220 'Cell-division inhibitor MinC-C' 'Cell-division inhibitor MinC-C' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002989077 Q87R34_nD1 312.1.1 6-110 'HIT-related' 'HIT-related' 'HIT-like' 'a+b three layers' 002989078 Q87JD8_nD3 7523.1.1 161-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989079 Q87JD8_nD2 7523.1.1 91-160,261-294 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989080 Q87JD8_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989081 Q87G12_nD1 11.1.5 41-175 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989082 Q87HP5_nD3 11.1.4 191-290 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989083 Q87HP5_nD1 109.4.1 26-80 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989084 Q87HP5_nD2 11.1.1 86-190 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989085 Q87SD3_nD1 304.113.1 11-135 'Alpha subunit of glutamate synthase, insertion domain' 'Alpha subunit of glutamate synthase, insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002989086 Q87SY1_nD2 1137.1.1 166-290 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain-like' 'a+b two layers' 002989087 Q87SY1_nD1 7550.1.1 46-165 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'a/b three-layered sandwiches' 002989088 Q79YW6_nD1 1.1.10 51-135 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989089 Q87JF8_nD2 805.1.1 331-515 '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' 'a+b complex topology' 002989090 Q87JF8_nD1 246.2.1 23-330 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002989091 Q87SE8_nD1 1111.1.1 6-205 'Trimeric intracellular cation (TRIC) channel' 'Trimeric intracellular cation (TRIC) channel' 'Trimeric intracellular cation (TRIC) channel' 'alpha complex topology' 002989092 Q87K28_nD1 7579.1.1 6-279 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989093 Q87H32_nD3 304.39.1 176-280 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002989094 Q87H32_nD2 4.1.1 111-175 'SH3' 'SH3' 'SH3' 'beta barrels' 002989095 Q87H32_nD1 5058.1.1 1-105 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002989096 Q87S22_nD1 101.22.1 1-64 'IscX-like' 'IscX-like' 'HTH' 'alpha arrays' 002989097 Q87M09_nD1 1075.5.1 6-220 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989098 Q87M09_nD2 1075.5.1 221-440 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989099 Q87HD7_nD1 148.1.2 6-150 'double Clp-N' 'Histone-related' 'Histone-like' 'alpha arrays' 002989100 Q87HD7_nD2 2004.1.1 161-350 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989101 Q87HD7_nD5 148.1.3 761-855 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989102 Q87HD7_nD3 148.1.3 351-545 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989103 Q87HD7_nD4 2004.1.1 546-760 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989104 Q87IJ3_nD1 5059.1.1 6-290 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002989105 Q87NC6_nD3 7577.1.1 481-850 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002989106 Q87NC6_nD4 3016.1.1 851-958 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002989107 Q87NC6_nD1 7577.1.1 6-360 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002989108 Q87NC6_nD2 3016.1.1 361-470 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002989109 Q87SE1_nD1 187.1.1 6-140 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002989110 Q87SE1_nD2 2003.1.3 141-240,411-480 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989111 Q87SE1_nD3 2003.1.2 241-410 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989112 Q87QI0_nD1 1075.3.1 21-290 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989113 Q87LQ2_nD1 7516.1.1 6-234 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002989114 Q87PM5_nD1 2496.1.1 1-105 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002989115 Q87PQ2_nD2 5069.1.1 176-280 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989116 Q87PQ2_nD1 5069.1.1 1-175 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989117 Q87KU6_nD1 2007.1.12 1-149 'Type II 3-dehydroquinate dehydratase' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989118 Q87IG4_nD1 109.1.1 1-215 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002989119 Q87HV6_nD1 9.5.1 21-189 'Hypothetical protein TT1927B' 'Hypothetical protein TT1927B' 'Lipocalins/Streptavidin' 'beta barrels' 002989120 Q87JX8_nD1 632.1.1 21-110 'Families 57/38 glycoside transferase middle domain' 'Families 57/38 glycoside transferase middle domain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989121 Q87M68_nD1 5038.1.1 6-390 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002989122 Q87KM9_nD1 141.1.1 11-280 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002989123 Q87R46_nD1 5059.1.1 1-240 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002989124 Q87JG3_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002989125 Q87JG3_nD2 7523.1.1 81-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989126 Q87P29_nD1 109.4.1 26-35,57-235 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989127 Q87JN2_nD3 7523.1.1 161-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989128 Q87JN2_nD2 7523.1.1 91-160,266-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989129 Q87JN2_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002989130 Q87RL4_nD2 301.3.1 191-319 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002989131 Q87RL4_nD1 5084.1.1 21-175 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002989132 Q87GE7_nD1 7579.1.1 36-200 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989133 Q87KK8_nD1 2007.2.3 6-160 '(Phosphotyrosine protein) phosphatases II' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989134 Q87FE8_nD4 605.1.1 351-445 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989135 Q87FE8_nD3 4168.1.1 321-350 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989136 Q87FE8_nD1 223.1.1 31-285 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989137 Q87FE8_nD5 225.1.1 446-605 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989138 Q87FE8_nD2 605.1.1 6-30,286-320 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989139 Q87N61_nD4 1.1.2 871-1030 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989140 Q87N61_nD3 2003.2.1 156-255,551-780,801-870 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002989141 Q87N61_nD2 2003.2.1 256-550 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002989142 Q87N61_nD1 1001.1.1 56-155 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'a+b two layers' 002989143 Q87M37_nD3 148.1.3 356-435 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989144 Q87M37_nD2 2004.1.1 11-20,121-355 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989145 Q87M37_nD1 101.1.2 21-115 'winged' 'HTH' 'HTH' 'alpha arrays' 002989146 Q87GF8_nD1 866.1.1 16-149 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002989147 Q87GF8_nD2 1.1.10 166-190 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989148 Q87FZ3_nD1 2002.1.1 1-245 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989149 Q87HQ4_nD6 3018.1.1 556-605 'MesJ substrate recognition domain-like' 'MesJ substrate recognition domain-like' 'MesJ substrate recognition domain-like' 'a+b two layers' 002989150 Q87HQ4_nD1 375.1.9 6-90,191-205 'Zinc-nucleated domain of serine integrase' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989151 Q87HQ4_nD2 375.1.9 96-190 'Zinc-nucleated domain of serine integrase' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989152 Q87HQ4_nD5 213.1.1 461-525 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002989153 Q87HQ4_nD3 UNASSIGNED 216-260,526-540 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002989154 Q87HQ4_nD4 304.8.1 206-215,261-460 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002989155 Q87GD9_nD1 5074.1.1 16-40 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'extended segments' 002989156 Q87K01_nD3 325.1.7 51-85,206-240 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989157 Q87K01_nD4 5086.1.1 111-180 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989158 Q87K01_nD1 5031.1.1 11-40 'Photosystem II reaction center protein J, PsbJ' 'Photosystem II reaction center protein J, PsbJ' 'Photosystem II reaction center protein J, PsbJ' 'extended segments' 002989159 Q87K01_nD2 5086.1.1 86-110,186-205 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989160 Q87K01_nD5 1.1.7 41-50,241-335 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989161 Q87JA1_nD1 1075.3.1 17-290 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989162 Q87IG9_nD1 7523.1.1 26-245 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989163 Q87L07_nD1 4.1.1 6-70 'SH3' 'SH3' 'SH3' 'beta barrels' 002989164 Q87FQ3_nD1 11.1.1 36-140 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989165 Q87IQ2_nD1 223.1.1 6-130 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989166 Q87IQ2_nD2 223.1.1 131-275 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989167 Q87IQ2_nD3 3755.3.1 276-440 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989168 Q87GP0_nD1 2003.1.1 1-235 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989169 Q87MP7_nD3 7523.1.1 161-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989170 Q87MP7_nD2 7523.1.1 91-160,261-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989171 Q87MP7_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002989172 Q87SL6_nD1 610.4.1 1-145 'YqeY domain' 'YqeY domain' 'ERP29 C domain-like' 'alpha arrays' 002989173 Q87FR8_nD1 632.1.1 21-75,106-124 'Families 57/38 glycoside transferase middle domain' 'Families 57/38 glycoside transferase middle domain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989174 Q87LQ1_nD1 3939.1.1 26-70 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002989175 Q87FV0_nD1 604.5.1 156-355 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002989176 Q87FV0_nD2 3470.1.1 6-150,371-520 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002989177 Q87FV0_nD3 604.5.1 521-720 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002989178 Q87QZ9_nD1 7523.1.1 21-258 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989179 Q87IB1_nD1 5084.1.1 21-215 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002989180 Q87KX6_nD2 1.1.7 6-30,266-390 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989181 Q87KX6_nD1 2002.1.1 16-265 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989182 Q87KP9_nD2 4.1.1 126-180 'SH3' 'SH3' 'SH3' 'beta barrels' 002989183 Q87KP9_nD1 304.17.1 6-125 'N-utilization substance G protein NusG, N-terminal domain' 'N-utilization substance G protein NusG, N-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002989184 Q87JU7_nD3 4099.1.1 161-245 'Kinetochore globular domain-like' 'Kinetochore globular domain-like' 'Kinetochore globular domain-like' 'a+b two layers' 002989185 Q87JU7_nD2 632.7.1 96-160 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989186 Q87JU7_nD1 3755.3.1 26-95 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989187 Q87NK3_nD3 101.1.8 261-315 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002989188 Q87NK3_nD2 101.1.8 106-260 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002989189 Q87NK3_nD1 186.1.1 6-105 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002989190 Q87HM4_nD1 1075.5.1 1-235 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989191 Q87HM4_nD2 1075.5.1 241-450 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989192 Q87JC3_nD1 2003.1.1 1-125 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989193 Q87JC3_nD2 2004.1.1 131-334 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989194 Q87QJ4_nD1 7516.1.1 6-130 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002989195 Q87PQ0_nD2 205.1.1 96-165 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002989196 Q87PQ0_nD1 205.1.1 36-95 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002989197 Q87NE4_nD1 2485.1.1 31-175 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002989198 Q87HI2_nD1 2485.1.1 21-135 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002989199 Q87KE2_nD1 297.1.1 6-185 'YrdC/RibB' 'YrdC/RibB' 'YrdC/RibB' 'a+b complex topology' 002989200 Q87LL9_nD2 304.30.1 131-195 'D-ribose-5-phosphate isomerase (RpiA), lid domain' 'D-ribose-5-phosphate isomerase (RpiA), lid domain' 'Alpha-beta plaits' 'a+b two layers' 002989201 Q87LL9_nD1 2003.1.7 1-130,196-218 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989202 Q87MC4_nD1 1.1.7 1-150 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989203 Q87MC4_nD2 4312.2.1 151-230 'YaeB-like' 'YaeB-like' 'RelE-like' 'a+b two layers' 002989204 Q87MX7_nD1 2007.1.3 1-125 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989205 Q87MX7_nD2 2004.1.1 126-300 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989206 Q87MX7_nD3 148.1.3 301-380 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989207 Q87MX7_nD4 101.1.1 381-445 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989208 Q87RZ9_nD1 11.1.4 26-185 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989209 Q87J26_nD1 2002.1.1 16-365 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989210 Q87J26_nD2 101.19.1 6-15,366-445 'C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN' 'C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN' 'HTH' 'alpha arrays' 002989211 Q87JP0_nD1 324.1.1 1-130 'OsmC-like' 'OsmC-like' 'OsmC-like' 'a+b two layers' 002989212 Q87RU8_nD2 103.2.1 46-130 'ATP cone' 'ATP cone' 'RuvA-C' 'alpha arrays' 002989213 Q87RU8_nD1 375.1.1 1-45 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989214 Q87JK0_nD2 7523.1.1 86-160,266-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989215 Q87JK0_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989216 Q87JK0_nD3 7523.1.1 161-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989217 Q87L09_nD1 1079.1.1 6-60 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002989218 Q87M30_nD4 212.1.1 481-600 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002989219 Q87M30_nD3 304.24.1 401-480 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989220 Q87M30_nD1 2004.1.1 6-285 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989221 Q87M30_nD5 304.24.1 601-675 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989222 Q87M30_nD2 1.1.7 286-400 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989223 Q87JS9_nD1 2006.1.5 6-305 'Arginase/deacetylase' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002989224 Q87M64_nD1 5050.1.1 1-220 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002989225 Q87M64_nD2 5050.1.1 221-425 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002989226 Q87N48_nD2 375.1.1 356-385 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989227 Q87N48_nD1 109.4.1 1-355 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989228 Q87MJ8_nD2 109.49.1 306-340 'Helical domain in acetyl-CoA carboxylase' 'Helical domain in acetyl-CoA carboxylase' 'Repetitive alpha hairpins' 'alpha superhelices' 002989229 Q87MJ8_nD1 386.1.1 151-175 'beta-beta-alpha zinc fingers' 'beta-beta-alpha zinc fingers' 'beta-beta-alpha zinc fingers' 'few secondary structure elements' 002989230 Q87MJ8_nD3 3186.1.1 501-600 'C-terminal domain of FliK' 'C-terminal domain of FliK' 'C-terminal domain of FliK' 'a+b two layers' 002989231 Q87N80_nD1 2004.1.1 6-239 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989232 P19249_nD1 11.8.1 36-189 'Osmotin-like' 'Osmotin-like' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989233 Q87GT9_nD2 3939.1.1 36-100 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002989234 Q87GT9_nD1 3939.1.1 6-35 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002989235 Q87K41_nD1 10.12.1 1-94 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989236 Q87HX6_nD1 10.12.1 11-190 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989237 Q87HX6_nD2 101.1.1 196-290 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989238 Q87JD7_nD1 5084.1.1 21-125,146-204 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002989239 Q87QP1_nD2 314.1.1 111-435 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989240 Q87QP1_nD1 192.7.1 1-110 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002989241 Q87JA3_nD2 2.4.1 236-339 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002989242 Q87JA3_nD1 2004.1.1 1-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989243 Q87H54_nD2 7523.1.1 111-225 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989244 Q87H54_nD1 7523.1.1 13-110,226-310 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989245 Q87MA2_nD1 75.1.1 16-180 'Cyclophilin-like' 'Cyclophilin-like' 'Cyclophilin-like' 'beta barrels' 002989246 Q87JS5_nD2 206.1.3 96-290 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002989247 Q87JS5_nD1 2003.1.10 1-95 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989248 Q87N03_nD1 633.13.1 6-170 'DsbB-like' 'DsbB-like' 'Bromodomain-like' 'alpha bundles' 002989249 Q87I00_nD2 191.1.1 81-215 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002989250 Q87I00_nD1 101.1.1 1-80,221-230 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989251 Q87FU4_nD1 11.1.4 21-155 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989252 Q87SY5_nD1 213.1.1 1-150 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002989253 Q87NY6_nD1 2003.1.1 1-260 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989254 Q87KQ0_nD1 3781.1.1 6-75 'Ribosomal protein L11/L12e N-terminal domain' 'Ribosomal protein L11/L12e N-terminal domain' 'Ribosomal protein L11/L12e N-terminal domain-like' 'a+b two layers' 002989255 Q87KQ0_nD2 101.1.16 76-140 'Ribosomal protein L11, C-terminal domain' 'HTH' 'HTH' 'alpha arrays' 002989256 Q05938_nD1 101.1.2 6-115 'winged' 'HTH' 'HTH' 'alpha arrays' 002989257 Q05938_nD2 330.2.1 206-280 'Ribosome binding protein Y (YfiA homologue)' 'Ribosome binding protein Y (YfiA homologue)' 'dsRBD-like' 'a+b two layers' 002989258 Q87SM2_nD1 5041.1.1 6-70 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002989259 Q87SM2_nD2 2008.1.1 71-215 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002989260 Q87SM2_nD3 375.1.1 231-270 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989261 Q87IX0_nD1 109.4.1 6-75 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989262 Q87IX0_nD2 246.3.1 81-315 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002989263 Q87PX5_nD2 605.1.1 151-205,251-285 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989264 Q87PX5_nD1 10.12.1 1-150 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989265 Q87PX5_nD3 UNASSIGNED 211-250 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002989266 Q87PX5_nD4 225.1.1 291-440 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989267 Q87LT1_nD1 4.1.1 6-115 'SH3' 'SH3' 'SH3' 'beta barrels' 002989268 Q87Q14_nD1 2004.1.1 6-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989269 Q87Q14_nD2 2.4.1 241-373 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002989270 Q87SZ2_nD1 102.2.1 1-115 'H2TH' 'H2TH' 'HhH/H2TH' 'alpha arrays' 002989271 Q87JN7_nD1 5084.1.1 51-289 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002989272 Q87J30_nD2 2007.1.14 151-289 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989273 Q87J30_nD1 2007.1.14 31-150 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989274 Q87MY7_nD1 1075.3.1 31-295 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989275 Q87RP9_nD1 532.2.1 6-90 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002989276 Q87RP9_nD2 375.1.1 111-150 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989277 Q87HP6_nD1 5084.5.4 26-373 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002989278 Q87S27_nD1 244.3.1 6-125 'SufE/NifU' 'SufE/NifU' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002989279 Q87H52_nD2 7524.1.1 251-460 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002989280 Q87H52_nD1 7524.1.1 6-250,461-480 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002989281 Q87FI6_nD3 601.46.1 246-360 'Regulatory CZB domain of diguanylate cyclase YdeH' 'Regulatory CZB domain of diguanylate cyclase YdeH' 'Four-helical up-and-down bundle' 'alpha bundles' 002989282 Q87FI6_nD1 3755.3.1 26-210 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989283 Q87FI6_nD2 150.5.1 211-240 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002989284 Q87J84_nD2 101.1.3 191-265 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002989285 Q87J84_nD1 223.1.1 6-170 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989286 Q87NS8_nD1 708.1.2 1-120 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002989287 Q87GH7_nD2 327.16.1 96-160 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989288 Q87GH7_nD1 3070.1.1 21-95 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002989289 Q87GH7_nD3 327.16.1 166-275 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989290 Q87GH7_nD4 1139.1.1 276-485 'secretin domain' 'secretin domain' 'secretin domain' 'beta barrels' 002989291 Q87NT6_nD1 3355.1.1 21-494 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002989292 Q87IH2_nD1 2002.1.1 1-360 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989293 Q87KP6_nD2 314.1.1 66-270 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989294 Q87KP6_nD1 101.1.2 6-65 'winged' 'HTH' 'HTH' 'alpha arrays' 002989295 Q87KP6_nD3 4.1.1 271-315 'SH3' 'SH3' 'SH3' 'beta barrels' 002989296 Q87LH6_nD1 3227.1.1 11-425 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002989297 Q87HV7_nD1 5069.1.1 6-179 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989298 Q87Q70_nD4 7502.1.1 541-635 'Anticodon-binding domain of Class II aaRS' 'Anticodon-binding domain of Class II aaRS' 'Anticodon-binding domain of Class II aaRS' 'a/b three-layered sandwiches' 002989299 Q87Q70_nD3 314.1.1 241-540 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989300 Q87Q70_nD2 309.1.2 66-240 'ThrRS/AlaRS editing domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002989301 Q87Q70_nD1 221.1.1 1-65 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002989302 Q87PC5_nD1 222.1.1 6-170 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002989303 Q87MV8_nD1 5054.1.1 11-280 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002989304 Q87N09_nD1 2004.1.1 1-213 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989305 Q87HU7_nD2 11.1.1 356-380 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989306 Q87HU7_nD1 11.1.1 36-65,96-245 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989307 Q87HU7_nD3 7579.1.1 66-95,246-255,281-355,431-800 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989308 Q87Q83_nD1 3892.1.1 41-70 'Transhydrogeanse domain II' 'Transhydrogeanse domain II' 'Transhydrogeanse domain II' 'alpha bundles' 002989309 Q87Q83_nD2 301.3.1 71-220 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002989310 Q87IW4_nD1 5.1.4 6-344 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002989311 Q87RP0_nD2 221.1.1 296-380 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002989312 Q87RP0_nD1 2004.1.1 21-295 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989313 Q87PM4_nD1 206.1.3 26-200 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002989314 Q87PM4_nD2 2.1.1 201-275 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989315 Q87RS8_nD3 632.2.1 96-165 'Bacterial immunoglobulin/albumin-binding domains' 'Bacterial immunoglobulin/albumin-binding domains' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989316 Q87RS8_nD4 5086.1.1 176-215 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989317 Q87RS8_nD2 4307.1.1 31-95 'EB1 dimerisation domain-like' 'EB1 dimerisation domain-like' 'EB1 dimerisation domain-like' 'alpha duplicates or obligate multimers' 002989318 Q87RS8_nD5 3755.3.1 216-360 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989319 Q87RS8_nD1 192.4.1 6-30 'Ribosomal protein L29 (L29p)' 'Ribosomal protein L29 (L29p)' 'Long alpha-hairpin' 'alpha bundles' 002989320 Q87RS8_nD6 304.48.1 361-520 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989321 Q87H99_nD1 213.1.1 1-144 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002989322 Q87G92_nD2 3691.1.1 171-255 'Phosphomannose isomerase helical insertion domain' 'Phosphomannose isomerase helical insertion domain' 'Phosphomannose isomerase helical insertion domain' 'alpha arrays' 002989323 Q87G92_nD1 10.12.1 21-170,256-325 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989324 Q87G92_nD3 10.12.1 326-410 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989325 Q87HT9_nD1 101.1.2 16-120 'winged' 'HTH' 'HTH' 'alpha arrays' 002989326 Q87HT9_nD2 650.1.1 151-205 'Chaperone J-domain' 'Chaperone J-domain' 'Chaperone J-domain' 'alpha bundles' 002989327 Q87QD7_nD1 2007.1.3 1-120 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989328 Q87QD7_nD2 101.1.2 126-219 'winged' 'HTH' 'HTH' 'alpha arrays' 002989329 Q87MG4_nD3 11.1.1 236-330 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989330 Q87MG4_nD4 11.1.1 341-375 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989331 Q87MG4_nD1 11.1.1 26-110 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989332 Q87MG4_nD2 11.1.1 111-235 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989333 Q87MG4_nD5 3569.1.1 376-400 'Epidermal growth factor receptor transmembrane-juxtamembrane segment' 'Epidermal growth factor receptor transmembrane-juxtamembrane segment' 'Epidermal growth factor receptor transmembrane-juxtamembrane segment-like' 'extended segments' 002989334 Q87NG3_nD1 5051.1.1 6-523 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002989335 Q87GY7_nD1 101.1.1 1-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989336 Q87GY7_nD2 2003.1.7 71-330 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989337 Q87FW7_nD1 5067.1.1 6-145 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989338 Q87RF4_nD1 5069.1.3 11-130 'Fumarate reductase respiratory complex transmembrane subunits' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989339 Q87P07_nD1 2007.1.3 1-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989340 Q87P07_nD2 101.1.2 146-225 'winged' 'HTH' 'HTH' 'alpha arrays' 002989341 Q87K72_nD1 2498.1.1 21-250 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002989342 Q87GZ7_nD1 5051.1.1 16-405 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002989343 Q87TF5_nD1 912.1.1 6-40 'HIV-1 VPU cytoplasmic domain' 'HIV-1 VPU cytoplasmic domain' 'HIV-1 VPU cytoplasmic domain' 'few secondary structure elements' 002989344 Q87TF5_nD2 601.28.1 41-150 'VPS28 C-terminal domain-like' 'VPS28 C-terminal domain-like' 'Four-helical up-and-down bundle' 'alpha bundles' 002989345 Q87QH2_nD1 325.1.7 56-95,151-185 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989346 Q87QH2_nD2 5086.1.1 96-150 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989347 Q87QH2_nD3 1.1.7 46-55,186-270 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989348 Q87QH2_nD4 1.1.7 21-40,276-355 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989349 Q87SR0_nD2 4168.1.1 176-230 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989350 Q87SR0_nD1 223.1.1 11-175 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989351 Q87SR0_nD3 605.1.1 231-295 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989352 Q87SR0_nD4 225.1.1 286-460 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989353 Q87T60_nD1 7516.1.1 1-220 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002989354 Q87RP8_nD2 246.1.1 211-480 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002989355 Q87RP8_nD1 1175.1.1 1-205,481-500 'Apolipoprotein N-acyltransferase transmembrane domain' 'Apolipoprotein N-acyltransferase transmembrane domain' 'Apolipoprotein N-acyltransferase transmembrane domain' 'alpha complex topology' 002989356 Q87QS7_nD1 2004.1.1 16-445,466-500 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989357 Q87QS7_nD2 142.1.1 516-605 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002989358 Q87FH8_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989359 Q87FH8_nD2 628.1.1 91-240 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002989360 Q87IW2_nD1 11.1.7 21-175 'PEBP-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989361 Q87HQ9_nD2 10.2.1 126-250 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'jelly-roll' 'beta sandwiches' 002989362 Q87HQ9_nD1 10.2.1 1-125 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'jelly-roll' 'beta sandwiches' 002989363 Q87SC6_nD1 2002.1.1 6-295 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989364 Q87QM3_nD1 9.1.1 26-179 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002989365 Q87S36_nD1 2002.1.1 1-375 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989366 Q87I82_nD1 2004.1.1 6-415 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989367 Q87SJ5_nD1 246.2.1 6-268 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002989368 Q87FD4_nD1 5084.5.1 16-350 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002989369 Q87GU6_nD1 101.1.2 6-150 'winged' 'HTH' 'HTH' 'alpha arrays' 002989370 Q87JI7_nD3 3174.2.1 176-235 'Barrel domain in flagellar protein FlgA' 'Barrel domain in flagellar protein FlgA' 'Ribosomal protein L14-like' 'beta barrels' 002989371 Q87JI7_nD2 70.3.1 111-175 'SET domain-like' 'SET domain-like' 'beta-clip' 'beta barrels' 002989372 Q87JI7_nD1 222.1.1 21-110 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002989373 Q87FX3_nD1 2002.5.1 11-265 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002989374 Q87RN7_nD2 304.1.1 166-280 'GHMP Kinase, C-terminal domain' 'GHMP Kinase, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002989375 Q87RN7_nD1 212.1.1 6-165,281-290 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002989376 Q87IX9_nD1 223.3.1 16-283 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002989377 Q87SK7_nD1 3454.1.1 151-225 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002989378 Q87MQ4_nD3 2006.1.3 81-175 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002989379 Q87MQ4_nD2 376.1.1 51-80 'RING/U-box' 'RING/U-box-like' 'RING/U-box-like' 'few secondary structure elements' 002989380 Q87MQ4_nD1 102.1.1 6-50 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002989381 Q87MU7_nD1 2486.1.1 1-145 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002989382 Q87MU7_nD2 225.1.1 146-395 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989383 Q87LZ6_nD1 2002.1.1 1-275 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989384 Q87M03_nD1 327.10.1 6-120 'Ribosome-binding factor A (RbfA)-related' 'Ribosome-binding factor A (RbfA)-related' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989385 P59601_nD2 304.25.1 176-300 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002989386 P59601_nD1 2011.1.1 1-175,301-378 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002989387 Q87JH7_nD1 109.4.1 21-50,96-125,146-670 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989388 Q87JH7_nD2 3718.1.1 671-904 'Flagellar protein fliT' 'Flagellar protein fliT' 'Flagellar protein fliT' 'alpha bundles' 002989389 Q87LK2_nD1 1.1.9 1-70 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989390 Q87LK2_nD2 2488.1.1 71-240 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002989391 Q87ME0_nD1 7531.1.1 6-240 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002989392 Q87K50_nD1 109.4.1 6-250 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989393 Q87I60_nD2 2007.1.3 166-324 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989394 Q87I60_nD1 2.10.1 16-165 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002989395 Q87GG2_nD1 5054.1.1 11-225 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002989396 Q87GG2_nD2 4104.1.1 251-345 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'beta sandwiches' 002989397 Q87PQ3_nD1 205.1.1 6-200 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002989398 Q87L36_nD1 3939.1.1 1-55 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002989399 Q87NY8_nD3 327.5.1 386-505 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989400 Q87NY8_nD1 323.1.1 1-145 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002989401 Q87NY8_nD2 323.1.1 146-385 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002989402 Q87JF5_nD1 311.1.1 1-145 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002989403 Q87P41_nD1 7579.1.1 1-339 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989404 Q87J93_nD2 304.48.1 186-338 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989405 Q87J93_nD1 603.1.1 6-165 't-snare proteins' 't-snare proteins' 'STAT-like' 'alpha bundles' 002989406 Q87R57_nD7 304.28.1 661-700,791-845 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989407 Q87R57_nD6 304.28.2 701-790 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989408 Q87R57_nD2 304.28.2 181-265 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989409 Q87R57_nD8 5067.1.1 501-550,846-1030 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989410 Q87R57_nD5 304.28.1 551-655 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989411 Q87R57_nD3 304.28.1 131-180,266-325 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989412 Q87R57_nD4 5067.1.1 1-40,326-500 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989413 Q87R57_nD1 304.28.1 41-130 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989414 Q87IY5_nD1 304.28.1 41-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989415 Q87IY5_nD4 5067.1.1 1-35,331-510 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989416 Q87IY5_nD3 304.28.1 136-185,276-330 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989417 Q87IY5_nD8 5067.1.1 511-560,866-1040 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989418 Q87IY5_nD5 304.28.1 561-670 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989419 Q87IY5_nD2 304.28.2 186-275 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989420 Q87IY5_nD6 304.28.2 721-805 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989421 Q87IY5_nD7 304.28.1 671-720,806-865 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989422 Q87GZ6_nD1 230.1.1 1-215 'Tetrahydrobiopterin biosynthesis enzymes-like' 'Tetrahydrobiopterin biosynthesis enzymes-like' 'T-fold' 'a+b two layers' 002989423 Q03477_nD1 3758.2.1 6-280 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002989424 Q87HH5_nD3 11.1.1 276-405 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989425 Q87HH5_nD2 11.1.1 176-275 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989426 Q87HH5_nD1 11.1.1 1-75,146-170 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989427 Q87R24_nD1 3153.1.1 36-133,166-190,236-269 'PipX' 'PipX' 'PipX' 'a+b two layers' 002989428 Q87G88_nD2 2002.5.1 416-675 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002989429 Q87G88_nD1 3227.1.1 31-405 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002989430 Q87NR6_nD1 109.22.1 231-290 'Survival of motor neuron protein-interacting protein 1' 'Survival of motor neuron protein-interacting protein 1' 'Repetitive alpha hairpins' 'alpha superhelices' 002989431 Q87NR6_nD2 2003.1.4 201-230,251-265,291-515 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989432 Q87FG5_nD1 232.1.1 21-333 'Pentein' 'Pentein' 'Pentein' 'a+b duplicates or obligate multimers' 002989433 Q87IG8_nD1 1075.3.1 6-215 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989434 Q87NV5_nD1 101.1.2 6-160 'winged' 'HTH' 'HTH' 'alpha arrays' 002989435 Q87IR6_nD1 605.1.1 36-105 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989436 Q87H51_nD1 101.1.1 1-60 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989437 Q87H51_nD2 191.1.1 61-195 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002989438 Q87M44_nD1 274.1.1 11-159 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002989439 Q87KH7_nD3 2004.1.1 131-415 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989440 Q87KH7_nD2 2.1.1 51-125 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989441 Q87KH7_nD1 130.1.1 1-45 'LEM/SAP HeH motif' 'LEM/SAP HeH motif' 'LEM/SAP HeH motif-like' 'alpha arrays' 002989442 Q87KX3_nD1 236.1.2 1-95 'GroES' 'GroES-related' 'GroES-like' 'beta barrels' 002989443 Q87LZ4_nD1 2003.1.5 11-209 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989444 Q87HY9_nD1 221.1.2 21-85 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002989445 Q87SR8_nD1 223.1.1 46-205 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989446 Q87SR8_nD5 304.48.1 466-625 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989447 Q87SR8_nD2 3922.1.1 1-25,306-335 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002989448 Q87SR8_nD4 223.1.1 336-465 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989449 Q87SR8_nD3 223.1.1 26-45,206-305 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989450 Q87QB5_nD2 4002.1.1 206-410 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002989451 Q87QB5_nD1 2007.1.7 21-205 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989452 Q87I28_nD3 5079.1.1 261-450 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'alpha duplicates or obligate multimers' 002989453 Q87I28_nD2 282.1.1 136-260 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002989454 Q87I28_nD1 109.13.1 21-135 'MgtE N-terminal domain-like' 'MgtE N-terminal domain-like' 'Repetitive alpha hairpins' 'alpha superhelices' 002989455 Q87SF8_nD2 148.1.3 116-145 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989456 Q87SF8_nD1 327.11.1 11-100 'Prokaryotic type KH domain (KH-domain type II)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989457 Q87K26_nD1 219.1.1 1-265 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002989458 Q87FS2_nD1 304.4.1 1-95 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002989459 Q87H94_nD1 2499.1.1 16-430 'Subtilisin-like' 'Subtilisin-like' 'Subtilisin-like' 'a/b three-layered sandwiches' 002989460 Q87H94_nD2 10.1.2 431-590 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989461 Q87N07_nD2 2005.1.1 11-130,191-330 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002989462 Q87N07_nD1 375.1.1 131-190 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989463 Q87N07_nD4 2.1.1 571-688 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989464 Q87N07_nD3 140.1.1 331-550 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002989465 Q87NC0_nD1 4.1.1 1-65 'SH3' 'SH3' 'SH3' 'beta barrels' 002989466 Q87NC0_nD2 2.1.1 66-130 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989467 Q87NC0_nD3 2.1.1 131-188 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989468 Q87HG4_nD1 2002.1.1 51-280 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989469 Q87HG4_nD2 1.1.7 31-50,281-409 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989470 Q87Q82_nD2 327.11.2 51-160,201-210 'Eukaryotic type KH-domain (KH-domain type I)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989471 Q87Q82_nD1 109.3.1 1-50 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989472 Q87T71_nD2 7512.1.1 186-360 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002989473 Q87T71_nD1 7512.1.1 6-185,361-395 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002989474 Q87SS5_nD2 223.1.1 41-100,191-255 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989475 Q87SS5_nD1 4.1.1 101-190 'SH3' 'SH3' 'SH3' 'beta barrels' 002989476 Q87PN9_nD1 632.22.1 41-155 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989477 Q87PN9_nD2 3470.1.1 1-40,421-450 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002989478 Q87PN9_nD4 5086.1.1 156-240,316-415 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989479 Q87PN9_nD3 3755.3.1 241-315 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989480 Q87M26_nD1 223.1.1 6-30 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989481 Q87M26_nD2 223.1.1 36-150 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989482 Q87M26_nD3 3479.1.1 151-185 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002989483 Q87S66_nD1 109.4.1 26-240 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989484 Q87RW0_nD3 301.2.1 221-425 'PurM N-terminal domain-like' 'PurM N-terminal domain-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002989485 Q87RW0_nD7 2007.1.1 1026-1300 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989486 Q87RW0_nD4 304.111.1 426-615 'PurM C-terminal domain-like' 'PurM C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989487 Q87RW0_nD2 103.6.1 156-220 'FGAM synthase PurL, linker domain' 'FGAM synthase PurL, linker domain' 'RuvA-C' 'alpha arrays' 002989488 Q87RW0_nD5 301.2.1 616-815 'PurM N-terminal domain-like' 'PurM N-terminal domain-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002989489 Q87RW0_nD6 304.111.1 816-1025 'PurM C-terminal domain-like' 'PurM C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989490 Q87RW0_nD1 304.100.1 1-150 'PurS-like' 'PurS-like' 'Alpha-beta plaits' 'a+b two layers' 002989491 Q87I94_nD1 2004.1.1 6-305 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989492 Q87L19_nD1 2007.1.1 1-195 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989493 Q87QL0_nD2 3016.1.1 281-345 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002989494 Q87QL0_nD1 7577.1.1 6-280 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002989495 Q87GF6_nD1 193.1.1 56-125 'Calponin-homology domain-like' 'Calponin-homology domain-like' 'CH domain-like' 'alpha bundles' 002989496 Q87GF6_nD2 6061.1.1 151-175 'Eukaryotic translation initiation factor 3 subunit 1' 'Eukaryotic translation initiation factor 3 subunit 1' 'Eukaryotic translation initiation factor 3 subunit 1' 'alpha arrays' 002989497 Q87NF3_nD1 307.1.1 41-185 'Hedgehog/DD-peptidase' 'Hedgehog/DD-peptidase' 'Hedgehog/DD-peptidase' 'a+b two layers' 002989498 Q87Q44_nD1 2004.1.1 1-175 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989499 Q87JQ7_nD1 243.3.1 31-130 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002989500 Q87GL5_nD1 7501.1.1 1-175 'Dihydrofolate reductases' 'Dihydrofolate reductases' 'Dihydrofolate reductases' 'a/b three-layered sandwiches' 002989501 Q87G51_nD2 5084.5.3 21-30,51-65,156-710 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002989502 Q87G51_nD1 3070.2.1 31-155 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002989503 Q87JE1_nD1 UNASSIGNED 41-50,121-135 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002989504 Q87JE1_nD2 2.4.1 28-40,136-170 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002989505 Q87SV6_nD1 7523.1.1 16-325 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989506 Q87K99_nD1 2003.1.5 6-210 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989507 Q87PE3_nD1 10.12.1 1-75 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989508 Q87PE3_nD2 10.12.1 171-238 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989509 Q87JZ0_nD1 211.1.1 1-80 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002989510 Q87JZ0_nD2 211.1.1 81-155 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002989511 Q87QN9_nD1 3308.2.1 21-235 'XAC2610 protein' 'XAC2610 protein' 'periplasmic lysozyme inhibitor of I-type lysozyme-like' 'beta duplicates or obligate multimers' 002989512 Q87H45_nD1 2486.1.1 1-235 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002989513 Q87NH0_nD1 216.1.1 6-35,61-80 'UBC-like' 'UBC-like' 'UBC-like' 'a+b two layers' 002989514 Q87Q36_nD1 320.1.1 16-190 'R3H domain' 'R3H domain' 'R3H domain-like' 'a+b two layers' 002989515 Q87I76_nD2 2006.1.6 151-460 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002989516 Q87I76_nD1 283.1.1 16-150 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002989517 Q87GW6_nD3 2003.2.1 96-180,411-700 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002989518 Q87GW6_nD4 1.1.2 701-829 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989519 Q87GW6_nD1 1001.1.1 31-95 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'a+b two layers' 002989520 Q87GW6_nD2 2003.2.1 181-300,321-410 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002989521 Q87HU3_nD1 220.1.1 1-75 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002989522 Q87P31_nD1 241.1.1 6-120 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002989523 Q87QQ4_nD1 1030.1.1 21-50 'Crispr-associated protein Csm2' 'Crispr-associated protein Csm2' 'Crispr-associated protein Csm2' 'alpha duplicates or obligate multimers' 002989524 Q87RI3_nD1 5045.1.1 1-75 'F1F0 ATP synthase subunit A' 'F1F0 ATP synthase subunit A' 'F1F0 ATP synthase subunit A' 'alpha bundles' 002989525 Q87RI3_nD2 106.1.1 81-244 'Globin-like' 'Globin-like' 'Globin-like' 'alpha arrays' 002989526 Q87RV4_nD1 3226.1.1 6-425 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002989527 Q87NV6_nD1 241.11.1 6-119 'YjbR-like' 'YjbR-like' 'Type III secretory system chaperone-like' 'a+b two layers' 002989528 Q87I02_nD1 101.1.4 26-90 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002989529 Q87I02_nD2 10.12.1 16-25,91-205 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989530 Q87MT9_nD4 192.8.1 276-345 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002989531 Q87MT9_nD3 2004.1.1 216-225,256-275 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989532 Q87MT9_nD5 2004.1.1 371-710 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989533 Q87MT9_nD2 59.1.4 106-195 'TFIID subunits TAF1-TAF7' 'triple barrel' 'triple barrel' 'beta complex topology' 002989534 Q87MT9_nD1 2.1.1 6-105 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989535 Q87MT9_nD6 148.1.3 696-820 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989536 Q79YV1_nD1 3747.1.1 6-120 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002989537 Q87SJ2_nD4 5.2.1 501-745 'beta-pinwheel' 'beta-pinwheel' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002989538 Q87SJ2_nD3 4016.1.1 346-480 'alpha-helical domain in type II DNA topoisomerase' 'alpha-helical domain in type II DNA topoisomerase' 'alpha-helical domain in type II DNA topoisomerase' 'alpha bundles' 002989539 Q87SJ2_nD2 4014.1.1 166-345,481-490 'a+b domain in type II DNA topoisomerase' 'a+b domain in type II DNA topoisomerase' 'a+b domain in type II DNA topoisomerase' 'a+b two layers' 002989540 Q87SJ2_nD1 101.1.2 31-165 'winged' 'HTH' 'HTH' 'alpha arrays' 002989541 Q87QC1_nD2 191.1.1 76-208 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002989542 Q87QC1_nD1 101.1.1 6-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989543 Q87KY2_nD1 5069.1.3 1-125 'Fumarate reductase respiratory complex transmembrane subunits' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989544 Q87S31_nD2 7587.1.1 141-265 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'a/b three-layered sandwiches' 002989545 Q87S31_nD1 4018.1.1 1-140 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b two layers' 002989546 Q87H38_nD1 2486.1.1 1-265 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002989547 Q87SX6_nD1 2004.1.1 11-205 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989548 Q87NB9_nD1 243.2.1 6-105 'Putative dsDNA mimic' 'Putative dsDNA mimic' 'Cystatin-like' 'a+b two layers' 002989549 Q87LK1_nD1 2003.1.10 1-120 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989550 Q87LK1_nD2 206.1.3 121-310 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002989551 Q87IM2_nD1 130.2.1 6-78,111-120 'PF09905 (DUF2132)' 'PF09905 (DUF2132)' 'LEM/SAP HeH motif-like' 'alpha arrays' 002989552 Q87Q10_nD3 11.1.1 611-690 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989553 Q87Q10_nD4 10.1.2 696-810 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989554 Q87Q10_nD1 109.4.1 71-340 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989555 Q87Q10_nD2 2498.1.1 341-605 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002989556 Q87L44_nD1 167.1.1 1-155 'Ribosomal protein S7' 'Ribosomal protein S7' 'Ribosomal protein S7' 'alpha arrays' 002989557 Q87J06_nD3 11.1.1 521-615 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989558 Q87J06_nD1 304.7.1 36-115 'Protease propeptides/inhibitors' 'Protease propeptides/inhibitors' 'Alpha-beta plaits' 'a+b two layers' 002989559 Q87J06_nD2 2499.1.1 116-520 'Subtilisin-like' 'Subtilisin-like' 'Subtilisin-like' 'a/b three-layered sandwiches' 002989560 Q87QK8_nD1 2007.1.1 6-204 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989561 Q87FW1_nD1 2500.1.1 6-805 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'a/b barrels' 002989562 Q87KJ6_nD2 101.1.8 121-245 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002989563 Q87KJ6_nD1 186.1.1 6-120 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002989564 Q87KJ6_nD3 101.1.8 246-300 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002989565 Q87G09_nD2 3016.1.1 301-395 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002989566 Q87G09_nD1 7577.1.1 31-300 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002989567 Q87PS0_nD2 2004.1.1 326-585 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989568 Q87PS0_nD1 1075.4.1 6-320 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989569 Q87IK0_nD2 101.1.1 161-210 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989570 Q87IK0_nD1 10.12.1 6-160 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989571 Q87IK0_nD3 101.1.1 211-265 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989572 Q87T36_nD2 3016.1.1 281-390 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002989573 Q87T36_nD1 7577.1.1 6-295 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002989574 Q87QS8_nD3 101.1.8 176-315 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002989575 Q87QS8_nD4 101.1.8 316-360 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002989576 Q87QS8_nD2 186.1.1 86-175 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002989577 Q87QS8_nD1 252.2.1 11-80 'GCC-box binding domain-like' 'GCC-box binding domain-like' 'DNA-binding domain' 'a+b two layers' 002989578 Q87TB5_nD1 605.1.1 6-35,141-170 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989579 Q87TB5_nD2 223.1.1 36-140 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989580 Q87TB5_nD4 225.1.1 281-430 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989581 Q87TB5_nD3 605.1.1 171-280 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989582 Q87S68_nD1 330.2.1 1-100 'Ribosome binding protein Y (YfiA homologue)' 'Ribosome binding protein Y (YfiA homologue)' 'dsRBD-like' 'a+b two layers' 002989583 Q87SW6_nD1 304.3.2 6-210 'Peptide methionine sulfoxide reductase' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002989584 Q87MF1_nD1 2484.1.1 16-205 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002989585 Q87T30_nD1 315.1.1 1-110 'Tautomerase/MIF' 'Tautomerase/MIF' 'Tautomerase/MIF-like' 'a+b two layers' 002989586 Q87MI3_nD1 331.22.1 26-215 'Outer membrane protein assembly factor BamC' 'Outer membrane protein assembly factor BamC' 'TBP-like' 'a+b two layers' 002989587 Q87MI3_nD2 331.3.1 221-339 'Bet v1-like' 'Bet v1-like' 'TBP-like' 'a+b two layers' 002989588 Q87HN5_nD1 524.2.1 21-145 'Sama2622-like' 'Sama2622-like' 'Ypt/Rab-GAP domain of gyp1p-like' 'alpha arrays' 002989589 Q87L32_nD1 375.1.1 6-45 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002989590 Q87FN6_nD1 3597.1.1 36-165 'Starch specific carbohydrate-binding modules' 'Starch specific carbohydrate-binding modules' 'Starch specific carbohydrate-binding modules' 'beta sandwiches' 002989591 Q87GN5_nD2 7515.1.1 216-545 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002989592 Q87GN5_nD1 1151.1.1 11-215 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'alpha bundles' 002989593 Q87MI7_nD1 2485.1.1 1-115 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002989594 Q87JU9_nD1 223.1.1 46-150 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989595 Q87JU9_nD2 605.1.1 16-45,151-180 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989596 Q87JU9_nD5 225.1.1 296-458 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989597 Q87JU9_nD3 4168.1.1 6-15,181-245 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989598 Q87JU9_nD4 605.1.1 246-295 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989599 Q87LB0_nD1 109.4.1 161-355 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989600 Q87PL2_nD1 174.1.1 1-135 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'few secondary structure elements' 002989601 Q87FW0_nD2 2002.1.1 1-40,111-309 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989602 Q87FW0_nD1 205.1.1 41-110 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002989603 Q87KM2_nD1 2004.1.1 1-224 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989604 Q87M82_nD1 1151.1.1 6-200 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'alpha bundles' 002989605 Q87M82_nD2 7515.1.1 236-605 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002989606 Q87LR8_nD1 3236.1.1 21-375 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002989607 Q87S33_nD1 304.28.1 41-125 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989608 Q87S33_nD2 5067.1.1 1-40,126-310 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989609 Q87Q60_nD2 314.1.1 101-325 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989610 Q87Q60_nD1 192.7.1 1-100 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002989611 Q87GE2_nD1 101.1.1 6-35 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989612 Q87P69_nD2 628.1.1 86-235 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002989613 Q87P69_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989614 Q87LQ4_nD1 304.102.1 6-160,311-340 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002989615 Q87LQ4_nD2 1056.1.1 161-305 'tRNA pseudouridine synthase TruD insertion domain' 'tRNA pseudouridine synthase TruD insertion domain' 'tRNA pseudouridine synthase TruD insertion domain' 'a+b two layers' 002989616 Q87MD2_nD1 109.4.1 6-340 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989617 Q87N89_nD2 2003.4.1 191-340 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002989618 Q87N89_nD1 2003.4.1 31-190 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002989619 Q87GG7_nD1 1.1.10 1-65 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989620 Q87PK3_nD1 1075.3.1 21-125,146-225 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989621 Q87GZ9_nD1 5053.1.1 31-460 'Clc chloride channel' 'Clc chloride channel' 'Clc chloride channel' 'alpha complex topology' 002989622 Q87FS0_nD3 101.1.2 286-420 'winged' 'HTH' 'HTH' 'alpha arrays' 002989623 Q87FS0_nD2 2006.1.3 86-145,166-285 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002989624 Q87FS0_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989625 Q87NU4_nD1 246.1.1 6-285 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002989626 Q87R75_nD1 5081.1.1 21-195 'Rhomboid-like' 'Rhomboid-like' 'Rhomboid-like' 'alpha bundles' 002989627 Q87S97_nD2 7523.1.1 91-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989628 Q87S97_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002989629 Q87MM7_nD1 328.7.1 51-175 'Smr domain' 'Smr domain' 'IF3-like' 'a+b two layers' 002989630 Q87R27_nD2 2003.1.2 1-125,271-420 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989631 Q87R27_nD1 2003.1.2 46-60,126-270 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989632 Q87RG3_nD1 222.1.1 1-155 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002989633 Q87T80_nD1 2005.1.1 6-165 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002989634 Q87JL3_nD1 7523.1.1 16-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989635 Q87GC2_nD2 101.1.6 126-215 'TrpR' 'HTH' 'HTH' 'alpha arrays' 002989636 Q87GC2_nD5 1073.1.1 536-560 'Mitochondrial calcium uniporter (MCU)' 'Mitochondrial calcium uniporter (MCU)' 'Mitochondrial calcium uniporter (MCU)' 'alpha arrays' 002989637 Q87GC2_nD1 101.1.1 41-120 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989638 Q87GC2_nD3 2484.1.1 216-430 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002989639 Q87GC2_nD4 2.8.1 431-535 'mu transposases-C' 'mu transposases-C' 'OB-fold' 'beta barrels' 002989640 Q87FE0_nD1 304.136.1 76-190 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002989641 Q87FE0_nD2 7523.1.1 21-75,191-295,511-540 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989642 Q87FE0_nD3 7523.1.1 296-510 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989643 Q87Q27_nD1 2498.1.1 11-165 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002989644 Q87MC1_nD1 1191.1.1 6-65 'UPF0253 protein YaeP' 'UPF0253 protein YaeP' 'UPF0253 protein YaeP' 'alpha duplicates or obligate multimers' 002989645 Q87II7_nD1 101.1.9 1-124 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002989646 Q87KL2_nD1 5106.1.1 6-35 'PetG subunit of the cytochrome b6f complex' 'PetG subunit of the cytochrome b6f complex' 'PetG subunit of the cytochrome b6f complex' 'extended segments' 002989647 Q87KL2_nD2 2.24.1 36-109 'probable receptor YhhM' 'probable receptor YhhM' 'OB-fold' 'beta barrels' 002989648 Q87Q05_nD2 1075.3.1 61-305 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989649 Q87Q05_nD1 5069.1.1 31-60 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989650 Q87P11_nD1 3843.1.1 11-170 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'alpha complex topology' 002989651 Q87TN6_nD1 2007.2.1 1-170 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989652 Q87KC1_nD1 5084.5.4 26-318 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002989653 Q87L40_nD1 7545.1.1 6-130 'YchN-like' 'YchN-like' 'YchN-like' 'a/b three-layered sandwiches' 002989654 Q87JQ9_nD2 3355.1.1 141-485,561-620 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002989655 Q87JQ9_nD1 3281.1.1 16-140 'NADH-quinone oxidoreductase subunit L (NuoL)-related' 'Sodium/proton antiporter subunits-like' 'Sodium/proton antiporter subunits-like' 'alpha complex topology' 002989656 Q87JQ9_nD3 1075.3.1 486-560 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989657 Q87JQ9_nD4 632.22.1 626-705 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002989658 Q87RK0_nD3 2002.1.1 251-570 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989659 Q87RK0_nD2 2487.1.1 1-20,146-250 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002989660 Q87RK0_nD1 607.1.1 21-145 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'alpha arrays' 002989661 Q87G08_nD4 2002.5.1 511-770 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002989662 Q87G08_nD3 304.48.1 306-510 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989663 Q87G08_nD1 3479.1.1 11-35,276-300 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002989664 Q87G08_nD2 223.1.1 36-275 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989665 Q87JA5_nD1 881.1.1 91-250 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'a+b three layers' 002989666 Q87RA7_nD1 7516.1.1 6-245 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002989667 Q87RA7_nD2 7558.1.1 251-260,286-565 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002989668 Q87IX4_nD1 5085.1.1 21-450 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002989669 Q87M86_nD1 2007.1.14 1-55 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989670 O50286_nD2 244.2.1 346-470 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002989671 O50286_nD1 2003.1.2 6-345 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989672 Q87NA6_nD1 4119.1.1 6-80 'YfmB-like' 'YfmB-like' 'YfmB-like' 'alpha bundles' 002989673 Q87SG6_nD1 2003.1.8 6-95 'MurCD/PglD N-terminal domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989674 Q87SG6_nD2 2004.1.1 96-300 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989675 Q87SG6_nD3 7570.1.1 301-435 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'a/b three-layered sandwiches' 002989676 Q87HS2_nD1 2003.1.1 1-120 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989677 Q87HS2_nD5 213.1.1 706-875 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002989678 Q87HS2_nD2 2007.3.1 121-280 'Succinyl-CoA synthetase domains' 'Succinyl-CoA synthetase domains' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989679 Q87HS2_nD4 206.1.3 456-705 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002989680 Q87HS2_nD3 2007.3.1 281-440 'Succinyl-CoA synthetase domains' 'Succinyl-CoA synthetase domains' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989681 Q87K90_nD1 7523.1.1 21-110,211-250 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989682 Q87K90_nD2 7523.1.1 111-210 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989683 Q87H76_nD1 2011.2.1 11-250 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002989684 Q87MN2_nD1 2498.3.1 1-175 'Uncharacterized protein YfcM' 'Uncharacterized protein YfcM' 'Zincin-like' 'mixed a+b and a/b' 002989685 Q87QR7_nD2 101.1.4 86-190 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002989686 Q87QR7_nD1 101.1.1 11-50 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989687 Q87PW1_nD1 5.1.4 36-370 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002989688 Q87ID2_nD2 2007.1.2 141-270 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989689 Q87ID2_nD1 2007.1.2 31-140,271-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989690 Q87SH4_nD2 2007.1.2 256-370,521-603 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989691 Q87SH4_nD1 109.4.1 11-250 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989692 Q87SH4_nD3 2007.1.2 371-520 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989693 Q87I50_nD1 5059.1.1 1-100 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002989694 Q87NP4_nD1 4154.1.1 6-60 'E2F-DP heterodimerization region' 'E2F-DP heterodimerization region' 'E2F-DP heterodimerization region' 'beta duplicates or obligate multimers' 002989695 Q87NP4_nD2 377.1.1 46-130,201-210 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002989696 Q87NP4_nD3 2492.1.1 131-200 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002989697 Q87IP7_nD3 1075.1.2 1-45,261-345,366-410 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989698 Q87IP7_nD2 1.1.2 96-215 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989699 Q87IP7_nD1 304.128.1 46-95,216-260 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002989700 Q87JL0_nD1 1075.3.1 21-565 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989701 Q87P93_nD1 876.1.1 6-115 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'a+b complex topology' 002989702 Q87JJ8_nD2 7523.1.1 86-165,261-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989703 Q87JJ8_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989704 Q87JJ8_nD3 7523.1.1 166-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989705 Q9X9J4_nD3 10.1.1 251-285,321-363 'Concanavalin A-like lectins/glucanases' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989706 Q9X9J4_nD2 304.136.1 21-30,181-245 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002989707 Q9X9J4_nD1 1.1.5 31-175 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989708 Q87HU4_nD1 222.1.1 1-140 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002989709 Q87FY1_nD2 301.3.1 201-315 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002989710 Q87FY1_nD1 3659.1.1 51-195 'MotY N-terminal domain' 'MotY N-terminal domain' 'MotY N-terminal domain' 'a+b two layers' 002989711 Q87S16_nD2 296.1.1 266-360 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'a+b three layers' 002989712 Q87S16_nD1 2002.1.1 6-265 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989713 Q87QL5_nD2 5067.1.1 501-525 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989714 Q87QL5_nD1 3355.1.1 11-500 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002989715 Q87SJ6_nD1 897.1.1 16-135 'Acidic mitochondrial matrix protein p32' 'Acidic mitochondrial matrix protein p32' 'Acidic mitochondrial matrix protein p32-like' 'a+b two layers' 002989716 Q87FT3_nD1 7579.1.1 1-430 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989717 Q9X9J5_nD1 4.1.1 102-115,171-235 'SH3' 'SH3' 'SH3' 'beta barrels' 002989718 Q87QR9_nD1 2004.1.1 31-280 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989719 Q87QR9_nD2 2004.1.1 281-470 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989720 Q87NH5_nD2 314.1.1 116-465 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989721 Q87NH5_nD1 2.1.1 1-110 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989722 Q87ST1_nD1 243.1.1 32-260 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002989723 Q87PT2_nD2 7097.1.1 1-10,106-185 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002989724 Q87PT2_nD1 7097.1.1 16-105 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002989725 Q87K89_nD2 5043.2.1 11-30,146-170 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002989726 Q87K89_nD5 225.1.1 311-480 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989727 Q87K89_nD6 2007.1.3 491-630 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989728 Q87K89_nD1 223.1.1 31-145 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989729 Q87K89_nD3 4168.1.1 171-235 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989730 Q87K89_nD4 605.1.1 236-310 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989731 Q87MV5_nD2 1042.1.1 241-315 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'a+b complex topology' 002989732 Q87MV5_nD1 601.19.1 36-235 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002989733 Q87MV5_nD3 3793.1.1 331-370 'Potassium channel modulator KCNE1' 'Potassium channel modulator KCNE1' 'Potassium channel modulator KCNE1' 'alpha complex topology' 002989734 Q87SJ1_nD3 7.1.1 251-350 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002989735 Q87SJ1_nD2 1.1.5 36-250 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989736 Q87SJ1_nD1 1.1.5 1-25 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989737 Q87FW3_nD1 2003.1.1 1-314 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989738 Q87LW8_nD1 1075.3.1 6-535 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989739 Q87P98_nD1 7523.1.1 126-230 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989740 Q87P98_nD2 7523.1.1 31-125,231-340 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989741 Q87LS4_nD1 309.1.1 6-170 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002989742 P59605_nD1 2005.1.1 6-170 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002989743 P59605_nD2 253.1.1 171-400 'Argininosuccinate synthetase-C' 'Argininosuccinate synthetase-C' 'Argininosuccinate synthetase-C' 'a+b complex topology' 002989744 Q87LF9_nD1 2003.1.14 6-155 'Aspartate/ornithine carbamoyltransferase' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989745 Q87LF9_nD2 2003.1.14 156-334 'Aspartate/ornithine carbamoyltransferase' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989746 Q87S98_nD1 3758.1.1 16-45,181-230 'Bacterial hemolysins' 'Bacterial hemolysins' 'Bacterial hemolysins-like' 'alpha bundles' 002989747 Q87S98_nD2 3355.1.1 61-165,246-380 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002989748 Q87MG8_nD1 210.1.3 1-260 'Class II glutamine amidotransferases' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002989749 Q87RV2_nD1 7579.1.1 11-415 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989750 Q87GH0_nD1 219.1.1 18-289 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002989751 Q87SC4_nD1 7569.1.1 6-225 'Uracil-DNA glycosylase-like' 'Uracil-DNA glycosylase-like' 'Uracil-DNA glycosylase-like' 'a/b three-layered sandwiches' 002989752 Q87TD0_nD1 274.1.1 16-100,286-325 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002989753 Q87TD0_nD2 102.1.1 101-215 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002989754 Q87TD0_nD3 102.1.1 216-285 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002989755 Q87HV9_nD1 2008.1.1 1-210 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002989756 Q87P52_nD1 532.2.1 6-94 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002989757 Q87H23_nD1 101.1.9 1-118 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002989758 Q87MN3_nD1 610.4.1 1-85 'YqeY domain' 'YqeY domain' 'ERP29 C domain-like' 'alpha arrays' 002989759 Q87QM9_nD1 2003.1.1 1-235 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989760 Q87SA0_nD1 266.1.1 1-283 'Thymidylate synthase/dCMP hydroxymethylase' 'Thymidylate synthase/dCMP hydroxymethylase' 'Thymidylate synthase/dCMP hydroxymethylase' 'a+b two layers' 002989761 Q87LF5_nD1 7558.1.1 1-240 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002989762 Q87QL9_nD2 4.6.1 211-290 'PRC-barrel domain' 'PRC-barrel domain' 'SH3' 'beta barrels' 002989763 Q87QL9_nD1 2005.1.1 1-205 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002989764 Q87QL9_nD3 1.1.8 291-370 'Aminomethyltransferase beta-barrel domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989765 Q87PV1_nD3 109.4.1 401-455 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989766 Q87PV1_nD4 3755.3.1 456-505 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002989767 Q87PV1_nD2 108.1.1 321-370 'EF-hand' 'EF-hand-related' 'EF-hand' 'alpha arrays' 002989768 Q87PV1_nD5 611.6.1 511-555 'PT26-6P helical domain' 'PT26-6P helical domain' 'N-cbl like' 'alpha bundles' 002989769 Q87PV1_nD1 206.1.1 21-320 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002989770 Q87PV1_nD6 109.4.1 556-685 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989771 Q87SW7_nD1 6041.1.1 1-65 'DUF1107-like' 'DUF1107-like' 'DUF1107-like' 'a+b two layers' 002989772 Q87S85_nD1 604.12.1 1-200 'MIT domain' 'MIT domain' 'Spectrin repeat-like' 'alpha bundles' 002989773 Q87S85_nD2 223.1.1 206-370 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989774 Q87S85_nD4 225.1.1 416-555 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989775 Q87S85_nD3 605.1.1 376-415 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989776 Q87MX2_nD4 187.1.1 376-450 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002989777 Q87MX2_nD3 221.1.4 296-370 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002989778 Q87MX2_nD1 325.1.7 36-120 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989779 Q87MX2_nD6 3559.1.1 841-865 'Mediator of RNA polymerase II transcription subunit 22' 'Mediator of RNA polymerase II transcription subunit 22' 'Mediator of RNA polymerase II transcription subunit 22' 'a+b complex topology' 002989780 Q87MX2_nD5 4991.1.1 451-495 'Lag-3 N-terminal region' 'Lag-3 N-terminal region' 'Lag-3 N-terminal region' 'extended segments' 002989781 Q87MX2_nD2 4335.1.1 6-35,126-295 'Nqo1 FMN-binding domain-like' 'Nqo1 FMN-binding domain-like' 'Nqo1 FMN-binding domain-like' 'a/b three-layered sandwiches' 002989782 Q87T24_nD1 3939.1.1 6-55 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002989783 Q87PC2_nD2 3922.1.1 561-639 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002989784 Q87PC2_nD1 2004.1.1 1-540 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989785 Q87KF3_nD1 221.1.1 1-60 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002989786 Q87RQ4_nD1 2488.1.1 1-150 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002989787 Q87TM5_nD1 2006.1.1 1-240 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002989788 Q87SW9_nD1 605.1.1 11-60 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989789 Q87KR5_nD1 101.17.1 1-55,76-90 'IHF-like DNA-binding proteins' 'IHF-like DNA-binding proteins' 'HTH' 'alpha arrays' 002989790 Q9ZBA2_nD2 3019.1.1 171-265 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002989791 Q9ZBA2_nD1 601.51.1 11-170,271-360 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002989792 Q87J87_nD1 101.1.1 21-115 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989793 Q87SI4_nD1 212.1.1 6-110 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002989794 Q87HM6_nD1 10.12.1 11-165 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989795 Q87HM6_nD2 101.1.1 171-225 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989796 Q87HM6_nD3 101.1.1 226-285 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989797 Q87GL4_nD1 10.1.2 41-160 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989798 Q87GL4_nD2 207.9.1 201-340 'Pentapeptide repeats' 'Pentapeptide repeats' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002989799 Q87Q12_nD1 1075.3.1 6-275 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989800 Q87M01_nD6 102.1.1 421-490 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002989801 Q87M01_nD1 885.1.1 1-130 'Transcription factor NusA, N-terminal domain' 'Transcription factor NusA, N-terminal domain' 'Transcription factor NusA, N-terminal domain' 'a+b complex topology' 002989802 Q87M01_nD2 2.1.1 131-200 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989803 Q87M01_nD5 102.1.1 346-420 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002989804 Q87M01_nD3 327.11.1 201-275 'Prokaryotic type KH domain (KH-domain type II)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989805 Q87M01_nD4 327.11.1 276-345 'Prokaryotic type KH domain (KH-domain type II)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002989806 Q87G74_nD1 5086.1.1 106-300 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989807 Q87G74_nD2 325.1.7 71-105,301-335 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989808 Q87G74_nD3 1.1.7 46-65,336-445 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989809 Q87SB1_nD2 314.1.1 161-500 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989810 Q87SB1_nD1 2.1.1 6-150 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002989811 Q87NJ8_nD2 2004.1.1 146-250,291-340 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989812 Q87NJ8_nD1 1075.4.1 66-125 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989813 Q87NJ8_nD3 1075.4.1 251-280 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989814 Q87N26_nD1 2004.1.1 6-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989815 Q87QR8_nD2 101.1.1 181-260 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989816 Q87QR8_nD1 142.1.1 21-30,51-180 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002989817 Q87HJ9_nD1 2007.1.3 1-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989818 Q87HJ9_nD2 101.1.3 141-200 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002989819 Q87K22_nD2 223.1.1 86-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989820 Q87K22_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002989821 Q87H05_nD1 2003.1.1 6-225 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989822 Q87H05_nD2 2003.6.1 226-510 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002989823 Q87H64_nD2 107.1.1 26-35,176-310 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002989824 Q87H64_nD1 107.1.1 36-175,311-320 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002989825 Q87QK9_nD1 2006.1.1 6-165 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002989826 Q87QK9_nD2 212.1.1 166-255 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002989827 Q87QK9_nD3 212.1.1 256-355 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002989828 Q87PG9_nD1 2005.1.1 6-263 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002989829 Q87PN7_nD1 7011.1.1 11-425 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002989830 Q87IH4_nD1 881.1.1 21-170 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'a+b three layers' 002989831 Q87KU5_nD2 325.1.7 76-150 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989832 Q87KU5_nD1 3079.1.1 1-30 'RNA polymerase PB2 N-terminal fragment' 'RNA polymerase PB2 N-terminal fragment' 'RNA polymerase PB2 N-terminal fragment' 'extended segments' 002989833 Q87SV2_nD4 109.4.1 391-415,481-495 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989834 Q87SV2_nD3 3355.1.1 151-160,181-350,381-390,431-665 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002989835 Q87SV2_nD6 7.1.1 726-825 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002989836 Q87SV2_nD1 3281.1.1 21-150 'NADH-quinone oxidoreductase subunit L (NuoL)-related' 'Sodium/proton antiporter subunits-like' 'Sodium/proton antiporter subunits-like' 'alpha complex topology' 002989837 Q87SV2_nD5 601.31.1 671-725,826-855 'Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ' 'Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ' 'Four-helical up-and-down bundle' 'alpha bundles' 002989838 Q87SV2_nD2 109.4.1 356-380 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989839 Q87S86_nD3 4.8.1 186-240 'Chromo domain-like' 'Chromo domain-like' 'SH3' 'beta barrels' 002989840 Q87S86_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989841 Q87S86_nD2 4.8.1 136-185 'Chromo domain-like' 'Chromo domain-like' 'SH3' 'beta barrels' 002989842 Q87MT1_nD1 304.103.1 1-180 'FMN-dependent nitroreductase-like' 'FMN-dependent nitroreductase-like' 'Alpha-beta plaits' 'a+b two layers' 002989843 Q87KC2_nD1 7558.1.1 1-290 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002989844 Q87HK4_nD1 2003.2.1 181-405 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002989845 Q87HK4_nD2 2003.2.1 31-180,406-610 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002989846 Q87HK4_nD3 1.1.2 631-765 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989847 Q87JR5_nD3 148.1.3 316-395 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989848 Q87JR5_nD4 101.1.1 396-445 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989849 Q87JR5_nD1 2007.1.3 6-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989850 Q87JR5_nD2 2004.1.1 136-315 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989851 Q87SE5_nD1 2011.2.1 1-230 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002989852 Q87HB7_nD1 225.1.1 6-150 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989853 Q79YZ3_nD3 3174.2.1 191-248 'Barrel domain in flagellar protein FlgA' 'Barrel domain in flagellar protein FlgA' 'Ribosomal protein L14-like' 'beta barrels' 002989854 Q79YZ3_nD1 222.1.1 41-125 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002989855 Q79YZ3_nD2 70.3.1 126-190 'SET domain-like' 'SET domain-like' 'beta-clip' 'beta barrels' 002989856 Q87R82_nD5 225.1.1 441-600 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002989857 Q87R82_nD2 223.1.1 31-55,181-285 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989858 Q87R82_nD1 223.1.1 56-180 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002989859 Q87R82_nD4 605.1.1 346-435 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002989860 Q87R82_nD3 4168.1.1 6-30,286-345 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989861 Q87GC4_nD1 2004.1.1 1-145 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989862 Q87GC4_nD2 2004.1.1 146-360,411-420 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989863 Q87K49_nD1 5049.1.3 6-190 'Na(+)-translocating NADH-quinone reductase subunit B' 'Ammonium transporter-related' 'Ammonium transporter-related' 'alpha complex topology' 002989864 Q87FS5_nD1 2007.2.2 1-145 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989865 Q87NG2_nD1 101.1.2 1-140 'winged' 'HTH' 'HTH' 'alpha arrays' 002989866 Q87PI7_nD1 5069.1.1 61-330 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989867 O24755_nD1 101.1.2 6-145 'winged' 'HTH' 'HTH' 'alpha arrays' 002989868 Q87MC8_nD1 7512.1.1 1-145 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002989869 Q87R16_nD2 2004.1.1 326-580 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989870 Q87R16_nD1 1075.4.1 6-105,126-320 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002989871 Q87KZ6_nD1 5059.1.1 1-295 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002989872 Q87H00_nD1 809.1.1 26-190 'beta-lactamase-inhibitor protein, BLIP' 'beta-lactamase-inhibitor protein, BLIP' 'BLIP-like' 'a+b two layers' 002989873 Q87PM8_nD1 2004.1.1 6-228 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989874 Q87QY8_nD1 304.102.1 51-238 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002989875 Q87JF4_nD3 7523.1.1 181-285 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989876 Q87JF4_nD2 7523.1.1 91-180,286-315 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989877 Q87JF4_nD1 101.1.2 6-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002989878 Q87R86_nD1 5051.1.1 6-180 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002989879 Q87G01_nD1 11.2.1 26-225 'C2 domain' 'C2 domain' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989880 Q87SF5_nD1 2003.1.1 1-125,236-265 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989881 Q87SF5_nD2 298.1.1 126-235 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002989882 Q87MT3_nD1 103.5.1 6-65 'post-HMGL domain-like' 'post-HMGL domain-like' 'RuvA-C' 'alpha arrays' 002989883 Q87SE4_nD1 331.9.1 26-140 'Subdomain of clathrin and coatomer appendage domain' 'Subdomain of clathrin and coatomer appendage domain' 'TBP-like' 'a+b two layers' 002989884 Q87FZ7_nD1 211.1.1 1-65 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002989885 Q87FZ7_nD2 211.1.1 66-125 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002989886 Q87JD9_nD1 5059.1.1 6-300 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002989887 Q87GG0_nD2 298.4.1 136-200 'V-type ATPase subunit E' 'V-type ATPase subunit E' 'FwdE/GAPDH domain-like' 'a+b two layers' 002989888 Q87GG0_nD1 3464.1.1 36-135 'Helical region in V-type proton ATPase subunit E' 'Helical region in V-type proton ATPase subunit E' 'Helical region in V-type proton ATPase subunit E' 'extended segments' 002989889 Q87LH4_nD3 64.3.1 381-425 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002989890 Q87LH4_nD1 2002.3.1 26-335 'Glycoside hydrolase/deacetylase' 'Glycoside hydrolase/deacetylase' 'TIM beta/alpha-barrel' 'a/b barrels' 002989891 Q87LH4_nD2 64.3.1 336-380 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002989892 Q87TJ2_nD1 150.1.1 1-165 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002989893 Q87HR3_nD2 10.2.1 281-365 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'Nucleoplasmin-like/VP (viral coat and capsid proteins)' 'jelly-roll' 'beta sandwiches' 002989894 Q87HR3_nD1 10.1.2 46-60,96-280,366-380 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989895 Q87GQ7_nD1 2004.1.1 6-135 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989896 Q87PC3_nD1 5.1.4 26-565 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002989897 Q87R69_nD1 7574.1.1 6-215 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002989898 Q87R69_nD2 2003.1.4 216-375 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989899 Q87R69_nD3 7574.1.1 381-570 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002989900 Q87K19_nD1 10.12.1 1-105 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989901 Q87H40_nD3 633.6.1 231-385 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002989902 Q87H40_nD1 4033.1.1 6-125 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'alpha arrays' 002989903 Q87H40_nD2 4052.1.1 126-230 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'beta complex topology' 002989904 Q87PL6_nD1 633.10.1 1-130 'IVS-encoded protein-like' 'IVS-encoded protein-like' 'Bromodomain-like' 'alpha bundles' 002989905 Q87PL6_nD6 3834.1.1 251-285,481-520 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002989906 Q87PL6_nD5 5086.1.1 286-480 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989907 Q87PL6_nD2 4177.1.1 131-170 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002989908 Q87PL6_nD4 4168.1.1 196-250,521-530 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002989909 Q87PL6_nD3 5043.2.1 171-195 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002989910 Q87LT0_nD1 2488.1.1 1-245 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002989911 Q87KW0_nD4 2485.1.1 486-613 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002989912 Q87KW0_nD3 109.10.1 446-480 'Translin' 'Translin' 'Repetitive alpha hairpins' 'alpha superhelices' 002989913 Q87KW0_nD1 11.1.1 41-150 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989914 Q87KW0_nD2 1079.1.1 211-310,331-445 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002989915 Q87LX6_nD1 2004.1.1 1-320 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989916 Q87I87_nD1 3086.1.1 6-35 'Diacylglycerol kinase (DAGK)' 'Diacylglycerol kinase (DAGK)' 'Diacylglycerol kinase (DAGK)' 'alpha bundles' 002989917 Q87I87_nD2 5046.1.1 51-75 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002989918 Q87PE7_nD1 101.1.4 6-105 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002989919 Q87MW4_nD1 2485.1.1 6-105 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002989920 Q87RT1_nD1 378.1.1 21-245 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002989921 Q87MU6_nD3 7573.1.1 316-515 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002989922 Q87MU6_nD4 109.4.1 536-720 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989923 Q87MU6_nD2 7573.1.1 111-310 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002989924 Q87MU6_nD1 2496.1.1 1-110 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002989925 Q87T59_nD2 7512.1.1 211-410 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002989926 Q87T59_nD1 7512.1.1 1-210,411-420 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002989927 Q87IW6_nD3 1.1.7 21-30,226-315 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989928 Q87IW6_nD1 325.1.7 31-65,196-225 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002989929 Q87IW6_nD2 5086.1.1 66-195 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002989930 Q87GQ2_nD4 57.1.1 581-740 'Cloacin translocation domain' 'Cloacin translocation domain' 'Cloacin translocation domain' 'beta complex topology' 002989931 Q87GQ2_nD3 101.15.1 366-415 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002989932 Q87GQ2_nD5 378.1.1 741-865 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002989933 Q87GQ2_nD2 11.1.4 136-345,431-475 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989934 Q87GQ2_nD1 UNASSIGNED 1-15,41-100 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002989935 Q87JC6_nD5 304.24.1 581-674 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989936 Q87JC6_nD2 1.1.7 266-380 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989937 Q87JC6_nD1 2004.1.1 1-265 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989938 Q87JC6_nD4 212.1.1 461-580 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002989939 Q87JC6_nD3 304.24.1 381-460 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002989940 Q87Q69_nD1 4281.1.1 6-64 'Ribosomal protein L35p' 'Ribosomal protein L35p' 'Ribosomal protein L35p' 'a+b two layers' 002989941 Q87LF2_nD1 2496.1.1 6-100 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002989942 Q87FZ2_nD1 331.3.1 1-145 'Bet v1-like' 'Bet v1-like' 'TBP-like' 'a+b two layers' 002989943 Q87J38_nD1 10.12.1 6-130 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989944 Q87J38_nD2 101.1.1 136-200 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989945 Q87TB8_nD2 284.1.1 76-160 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002989946 Q87TB8_nD1 192.1.1 6-75 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002989947 Q87R78_nD1 101.17.1 1-55,76-90 'IHF-like DNA-binding proteins' 'IHF-like DNA-binding proteins' 'HTH' 'alpha arrays' 002989948 Q79YX6_nD1 4095.1.1 16-55 'ATP-dependent DNA ligase DNA-binding domain' 'ATP-dependent DNA ligase DNA-binding domain' 'ATP-dependent DNA ligase DNA-binding domain' 'alpha bundles' 002989949 Q79YX6_nD3 103.1.1 121-165 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002989950 Q79YX6_nD4 103.5.1 176-215 'post-HMGL domain-like' 'post-HMGL domain-like' 'RuvA-C' 'alpha arrays' 002989951 Q79YX6_nD6 101.1.1 286-325 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989952 Q79YX6_nD2 101.1.14 66-110 'DNA-binding domain of intron-encoded endonucleases' 'HTH' 'HTH' 'alpha arrays' 002989953 Q79YX6_nD5 101.1.2 236-280 'winged' 'HTH' 'HTH' 'alpha arrays' 002989954 Q79YX6_nD8 821.1.1 396-495 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'a+b three layers' 002989955 Q79YX6_nD7 103.1.1 331-375 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002989956 Q87I24_nD1 3579.1.1 26-90 'NADH-quinone oxidoreductase subunit J' 'NADH-quinone oxidoreductase subunit J' 'NADH-quinone oxidoreductase subunit J' 'extended segments' 002989957 Q87RE7_nD2 2007.3.1 126-290 'Succinyl-CoA synthetase domains' 'Succinyl-CoA synthetase domains' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989958 Q87RE7_nD1 2003.1.1 6-125 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989959 Q87KB2_nD2 7523.1.1 116-215 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989960 Q87KB2_nD1 7523.1.1 21-115,216-255 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002989961 Q87TL6_nD3 11.1.1 376-480 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989962 Q87TL6_nD4 9.1.1 491-545,576-630 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002989963 Q87TL6_nD2 11.1.1 261-375 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989964 Q87TL6_nD5 9.1.1 631-765 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002989965 Q87TL6_nD1 11.1.1 31-164,186-260 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002989966 Q87PV9_nD2 148.1.3 381-465 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002989967 Q87PV9_nD1 2004.1.1 6-380 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002989968 Q87PV9_nD3 101.1.1 486-540 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002989969 Q87G93_nD1 311.1.1 1-150 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002989970 Q87G93_nD2 2007.2.2 161-260 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989971 Q87G93_nD3 3227.1.1 271-630 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002989972 Q87M70_nD1 2003.1.2 11-400 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002989973 Q87M70_nD2 6058.1.1 401-510 'C-terminal alpha domain in Alpha-Glycerophosphate Oxidase' 'C-terminal alpha domain in Alpha-Glycerophosphate Oxidase' 'C-terminal alpha domain in Alpha-Glycerophosphate Oxidase' 'alpha arrays' 002989974 Q87H27_nD2 5069.1.1 156-335 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989975 Q87H27_nD1 5069.1.1 6-155 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002989976 Q87JQ1_nD1 10.12.1 11-200 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002989977 Q87GD5_nD1 3826.1.1 6-90 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'alpha bundles' 002989978 Q87GD5_nD2 5054.1.1 96-128 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002989979 Q87RV0_nD2 1.1.9 266-375 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989980 Q87RV0_nD1 7531.1.1 11-265 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002989981 Q87SQ6_nD1 607.1.1 31-140 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'alpha arrays' 002989982 Q87SQ6_nD2 2487.1.1 6-30,146-250 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002989983 Q87SQ6_nD3 2002.1.1 251-535 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002989984 Q87GV6_nD3 304.28.1 211-285,426-440 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989985 Q87GV6_nD4 1.1.5 286-425 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002989986 Q87GV6_nD2 3012.1.1 146-210 'Cof C2 cap domain' 'Cof C2 cap domain' 'Cof C2 cap domain' 'a+b two layers' 002989987 Q87GV6_nD5 5067.1.1 16-40,441-605 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002989988 Q87GV6_nD1 304.28.1 41-130 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002989989 Q87QG8_nD1 7579.1.1 26-309 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002989990 Q87J01_nD1 150.1.1 6-155 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002989991 P40608_nD1 109.4.1 21-210 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002989992 Q87RR0_nD1 314.1.1 6-210 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002989993 Q87S55_nD2 101.1.2 126-229 'winged' 'HTH' 'HTH' 'alpha arrays' 002989994 Q87S55_nD1 2007.1.3 1-125 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002989995 Q87FN9_nD1 10.1.2 11-165 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989996 Q87FN9_nD2 10.1.2 176-275 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002989997 Q87FN9_nD3 378.1.1 286-325,356-535 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002989998 Q87GQ4_nD3 604.6.1 421-470 'GAT-like domain' 'GAT-like domain' 'Spectrin repeat-like' 'alpha bundles' 002989999 Q87GQ4_nD1 206.1.3 126-300 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990000 Q87GQ4_nD2 2004.1.1 6-125,301-420 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990001 Q87KE0_nD2 206.1.3 86-370 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990002 Q87KE0_nD1 2003.1.10 1-85 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990003 Q87SC3_nD1 601.14.1 6-180 'Hemerythrin' 'Hemerythrin' 'Four-helical up-and-down bundle' 'alpha bundles' 002990004 Q87GA6_nD2 7512.1.1 161-340 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990005 Q87GA6_nD1 7512.1.1 1-160 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990006 Q87H65_nD1 192.29.1 1-250 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'Long alpha-hairpin' 'alpha bundles' 002990007 Q87H65_nD5 601.3.1 651-780 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002990008 Q87H65_nD2 605.1.1 251-335 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990009 Q87H65_nD4 2007.1.3 506-645 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990010 Q87H65_nD3 225.1.1 336-495 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990011 Q87H37_nD3 325.1.1 346-470 'CO dehydrogenase molybdoprotein N-domain-like' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990012 Q87H37_nD4 3794.1.1 471-605 'Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit' 'Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related' 'Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related' 'a+b two layers' 002990013 Q87H37_nD2 206.1.3 6-15,126-345 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990014 Q87H37_nD5 325.1.7 606-690 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990015 Q87H37_nD1 2003.1.10 16-125 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990016 Q87Q04_nD1 5054.1.1 6-65 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002990017 Q87Q04_nD2 1075.3.1 66-300 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990018 Q87NP9_nD1 272.1.1 61-145 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'a+b two layers' 002990019 Q87RQ7_nD2 304.14.1 191-260 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002990020 Q87RQ7_nD1 1.1.2 51-190 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990021 Q87IP4_nD6 3755.3.1 446-635 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990022 Q87IP4_nD1 601.1.2 41-145,281-315 'I/LWEQ domain (Pfam 01608)' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002990023 Q87IP4_nD2 601.51.1 6-40,316-350 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002990024 Q87IP4_nD5 3834.1.1 406-445,636-670 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002990025 Q87IP4_nD3 633.10.1 151-275 'IVS-encoded protein-like' 'IVS-encoded protein-like' 'Bromodomain-like' 'alpha bundles' 002990026 Q87IP4_nD4 605.1.1 351-405,671-680 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990027 Q87MB5_nD4 101.1.2 426-500 'winged' 'HTH' 'HTH' 'alpha arrays' 002990028 Q87MB5_nD3 101.1.2 366-420,501-525 'winged' 'HTH' 'HTH' 'alpha arrays' 002990029 Q87MB5_nD1 2004.1.1 6-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990030 Q87MB5_nD5 101.1.2 581-654 'winged' 'HTH' 'HTH' 'alpha arrays' 002990031 Q87MB5_nD2 2004.1.1 216-365,526-580 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990032 Q87LI6_nD1 102.1.2 1-220 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002990033 Q87LI6_nD2 221.4.1 226-355 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002990034 Q87L08_nD2 2004.1.1 196-365 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990035 Q87L08_nD1 7566.1.1 6-190 'HflX family GTPase N-terminal domain' 'HflX family GTPase N-terminal domain' 'HflX family GTPase N-terminal domain' 'a/b three-layered sandwiches' 002990036 Q87L08_nD3 304.24.1 366-429 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990037 Q87JI8_nD1 603.5.1 6-135 'FlgN-like' 'FlgN-like' 'STAT-like' 'alpha bundles' 002990038 Q87NW7_nD1 2007.1.1 1-305 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990039 Q87QZ6_nD1 7603.1.1 66-305 'Immunomodulating metalloprotease IMPa N-terminal domain' 'Immunomodulating metalloprotease IMPa N-terminal domain' 'Immunomodulating metalloprotease IMPa N-terminal domain' 'a/b three-layered sandwiches' 002990040 Q87QZ6_nD2 1142.1.1 36-65,311-425 'Immunomodulating metalloprotease IMPa helical domain' 'Immunomodulating metalloprotease IMPa helical domain' 'Immunomodulating metalloprotease IMPa helical domain' 'alpha arrays' 002990041 Q87QZ6_nD4 2498.1.1 551-905 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990042 Q87QZ6_nD3 10.25.1 426-550 'Jelly-roll domain in peptidase M60 family' 'Jelly-roll domain in peptidase M60 family' 'jelly-roll' 'beta sandwiches' 002990043 Q87HB4_nD2 109.1.1 81-204 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002990044 Q87HB4_nD1 2485.1.1 1-80 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990045 Q87TP7_nD1 314.1.1 6-300 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002990046 Q87NF7_nD1 7523.1.1 36-360 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990047 Q87SN5_nD3 4333.1.1 321-583 'DNA methylase specificity domain' 'DNA methylase specificity domain' 'DNA methylase specificity domain' 'a+b complex topology' 002990048 Q87SN5_nD2 159.1.4 291-340 'Type II deoxyuridine triphosphatase-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002990049 Q87SN5_nD1 4333.1.1 6-55,96-290 'DNA methylase specificity domain' 'DNA methylase specificity domain' 'DNA methylase specificity domain' 'a+b complex topology' 002990050 Q87LX9_nD2 7523.1.1 31-80,166-275,516-560 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990051 Q87LX9_nD1 304.136.1 81-165 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002990052 Q87LX9_nD3 7523.1.1 276-515 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990053 Q87LN7_nD2 1.1.7 181-290 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990054 Q87LN7_nD5 3986.1.1 481-590 'GTP-binding protein lepA C-terminal domain' 'GTP-binding protein lepA C-terminal domain' 'GTP-binding protein lepA C-terminal domain-like' 'a+b two layers' 002990055 Q87LN7_nD1 2004.1.1 1-180 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990056 Q87LN7_nD3 304.24.1 291-370 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990057 Q87LN7_nD4 304.24.1 371-480 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990058 Q87HJ1_nD1 2485.1.1 1-144 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990059 Q87QW4_nD3 101.1.2 336-445 'winged' 'HTH' 'HTH' 'alpha arrays' 002990060 Q87QW4_nD2 603.6.1 121-330 'MukF C-terminal domain-like' 'MukF C-terminal domain-like' 'STAT-like' 'alpha bundles' 002990061 Q87QW4_nD1 101.1.2 6-120 'winged' 'HTH' 'HTH' 'alpha arrays' 002990062 Q87Q89_nD1 328.7.1 6-20,51-125 'Smr domain' 'Smr domain' 'IF3-like' 'a+b two layers' 002990063 Q87N67_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002990064 Q87N67_nD2 7523.1.1 86-298 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990065 Q87HZ2_nD1 101.1.4 1-50 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990066 Q87HZ2_nD2 2007.1.2 51-160,291-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990067 Q87HZ2_nD3 2007.1.2 161-290 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990068 Q87J44_nD1 1084.1.1 6-54 'Photosystem II reaction center W protein, chloroplastic' 'Photosystem II reaction center W protein, chloroplastic' 'Photosystem II reaction center W protein, chloroplastic' 'extended segments' 002990069 Q87I03_nD1 7577.1.1 11-430 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990070 Q87J54_nD1 7577.1.1 6-295 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990071 Q87J54_nD2 3016.1.1 16-30,296-380 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002990072 Q87I29_nD2 2005.1.1 146-290 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002990073 Q87I29_nD1 2005.1.1 1-145 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002990074 Q87P46_nD1 1180.1.1 11-215 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'alpha bundles' 002990075 Q87K35_nD1 3009.1.1 1-205 'Insertion subdomain in DsbA-like' 'Insertion subdomain in DsbA-like' 'Insertion subdomain in DsbA-like' 'alpha arrays' 002990076 Q87H55_nD2 1075.3.1 46-275 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990077 Q87H55_nD1 4177.1.1 11-45 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002990078 Q87N57_nD3 1.1.16 286-435 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990079 Q87N57_nD4 UNASSIGNED 436-465,491-535 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990080 Q87N57_nD1 1.1.16 41-150 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990081 Q87N57_nD2 1.1.16 151-280 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990082 Q87T67_nD1 7516.1.1 1-239 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002990083 Q87RY4_nD1 2484.1.1 16-160 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990084 Q87NZ1_nD1 1075.3.1 56-340 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990085 Q87MT6_nD1 2006.1.5 1-300 'Arginase/deacetylase' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990086 Q87NM0_nD1 601.4.1 16-220 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002990087 Q87PJ2_nD4 205.1.1 381-485 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002990088 Q87PJ2_nD3 2007.22.1 1-20,236-380 'Methyl-viologen reducing hydrogenase subunit D' 'Methyl-viologen reducing hydrogenase subunit D' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990089 Q87PJ2_nD1 2003.1.2 36-165 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990090 Q87PJ2_nD5 377.12.1 486-545 'RPL34' 'RPL34' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002990091 Q87PJ2_nD2 205.1.1 21-30,166-235 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002990092 Q87K12_nD1 10.1.1 21-290 'Concanavalin A-like lectins/glucanases' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002990093 Q87K12_nD2 11.1.1 291-390 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990094 Q87K12_nD3 207.2.1 381-740 'Pectin lyase-like' 'Pectin lyase-like' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002990095 Q87ME3_nD3 166.1.1 296-400 '1-deoxy-D-xylulose-5-phosphate reductoisomerase-C' '1-deoxy-D-xylulose-5-phosphate reductoisomerase-C' '1-deoxy-D-xylulose-5-phosphate reductoisomerase-C' 'alpha superhelices' 002990096 Q87ME3_nD1 2003.1.1 1-150,276-295 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990097 Q87ME3_nD2 298.1.1 151-275 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002990098 Q87PX4_nD1 2007.1.3 1-150 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990099 Q87PV7_nD2 3070.1.1 96-185 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002990100 Q87PV7_nD5 2.7.1 366-535 'Tail-associated lysozyme gp5-N' 'Tail-associated lysozyme gp5-N' 'OB-fold' 'beta barrels' 002990101 Q87PV7_nD6 79.1.1 521-690 'Phage tail fiber protein trimerization domain' 'Phage tail fiber protein trimerization domain' 'Phage tail fiber protein trimerization domain' 'beta duplicates or obligate multimers' 002990102 Q87PV7_nD1 1.1.13 1-95 'Phage tail proteins' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990103 Q87PV7_nD3 3071.1.1 226-285 'C-terminal insertion domain in phage tail proteins' 'C-terminal insertion domain in phage tail proteins' 'C-terminal insertion domain in phage tail proteins' 'a+b complex topology' 002990104 Q87PV7_nD4 1.1.13 186-225,286-360 'Phage tail proteins' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990105 Q87FZ8_nD3 7523.1.1 166-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990106 Q87FZ8_nD2 7523.1.1 86-165,276-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990107 Q87FZ8_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002990108 Q87LF3_nD1 327.2.1 1-80 'BolA-like' 'BolA-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990109 Q87G60_nD3 304.48.1 521-700 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990110 Q87G60_nD1 223.1.1 1-335 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990111 Q87G60_nD2 223.1.1 336-505 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990112 Q87IY6_nD1 325.1.7 61-95,171-205 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990113 Q87IY6_nD2 5086.1.1 96-170 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002990114 Q87IY6_nD4 1.1.7 27-45,301-375 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990115 Q87IY6_nD3 1.1.7 46-60,206-300 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990116 Q87KA8_nD3 160.1.1 351-465 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002990117 Q87KA8_nD1 1.1.7 1-75 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990118 Q87KA8_nD2 2004.1.1 76-350 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990119 Q87SZ1_nD1 221.1.2 1-205 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002990120 Q87L69_nD1 2004.1.1 11-170 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990121 Q87L69_nD2 148.1.3 171-220 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990122 Q87L69_nD3 304.14.1 416-500 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002990123 Q87RL6_nD1 101.8.1 1-470 'An anticodon-binding domain of class I aminoacyl-tRNA synthetases' 'An anticodon-binding domain of class I aminoacyl-tRNA synthetases' 'HTH' 'alpha arrays' 002990124 Q87FL5_nD5 225.1.1 336-475 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990125 Q87FL5_nD2 223.1.1 41-200 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990126 Q87FL5_nD1 605.1.1 11-40,201-220 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990127 Q87FL5_nD4 605.1.1 286-330 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990128 Q87FL5_nD3 4168.1.1 221-285 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990129 Q87QI4_nD1 2006.1.2 1-185 'DHH phosphoesterases' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990130 Q87QI4_nD2 5104.1.1 191-300 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'a+b three layers' 002990131 Q87KC8_nD2 241.15.1 151-265 'FP (Fbxo7/PI31) dimerization domain' 'FP (Fbxo7/PI31) dimerization domain' 'Type III secretory system chaperone-like' 'a+b two layers' 002990132 Q87KC8_nD1 11.1.1 6-150 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990133 Q87H15_nD1 5065.1.1 46-350 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002990134 Q87JC7_nD1 305.1.1 1-60 'RBP11-like subunits of RNA polymerase' 'RBP11-like subunits of RNA polymerase' 'DCoH-like' 'a+b two layers' 002990135 Q03474_nD1 142.1.1 6-100 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002990136 Q03474_nD2 101.1.1 101-165 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990137 Q03474_nD3 101.1.1 171-240 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990138 Q87IL7_nD2 884.1.1 221-325 'Hypothetical protein YjiA, C-terminal domain' 'Hypothetical protein YjiA, C-terminal domain' 'Hypothetical protein YjiA, C-terminal domain' 'a+b two layers' 002990139 Q87IL7_nD1 2004.1.1 6-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990140 Q87KA1_nD2 101.1.1 121-180 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990141 Q87KA1_nD1 876.1.1 36-115 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'a+b complex topology' 002990142 Q87KA1_nD4 3433.1.2 246-293 'Chromosome-encoded ParB dimerization domain' 'ParB dimerization domain' 'ParB dimerization domain' 'a+b duplicates or obligate multimers' 002990143 Q87KA1_nD3 3317.1.1 181-240 'KorB C-terminal domain' 'KorB C-terminal domain' 'KorB C-terminal domain-like' 'alpha arrays' 002990144 Q87IB3_nD1 2007.1.4 1-115 'Phosphofructokinase N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990145 Q87IB3_nD2 4004.1.1 116-295 'NAD kinase beta sandwich domain-like' 'NAD kinase beta sandwich domain-like' 'NAD kinase beta sandwich domain-like' 'beta sandwiches' 002990146 Q87I72_nD3 7523.1.1 191-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990147 Q87I72_nD1 101.1.2 16-110 'winged' 'HTH' 'HTH' 'alpha arrays' 002990148 Q87I72_nD2 7523.1.1 111-190,301-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990149 Q87NT5_nD1 160.1.1 21-165 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002990150 Q87FI5_nD3 7523.1.1 146-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990151 Q87FI5_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002990152 Q87FI5_nD2 7523.1.1 91-160,281-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990153 Q87N83_nD1 213.1.1 6-320 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002990154 Q87KZ1_nD1 1114.1.1 6-140 'Serine acetyltransferase N-terminal domain' 'Serine acetyltransferase N-terminal domain' 'Serine acetyltransferase N-terminal domain' 'alpha arrays' 002990155 Q87KZ1_nD2 208.1.1 141-270 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002990156 Q87HZ5_nD1 2007.2.2 1-100 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990157 Q87HZ5_nD2 2007.2.2 116-220 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990158 Q87HZ5_nD3 3227.1.1 241-575 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002990159 Q87Q39_nD1 5065.1.1 1-325 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002990160 Q87GZ2_nD1 11.1.4 66-159 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990161 Q87IP8_nD3 1075.1.2 1-45,246-405 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990162 Q87IP8_nD2 1.1.2 96-215 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990163 Q87IP8_nD1 304.128.1 46-95,216-245 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002990164 Q87M39_nD2 3261.1.1 96-145 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002990165 Q87M39_nD1 11.1.1 26-95 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990166 Q87M39_nD3 327.16.1 176-455 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990167 Q87LV2_nD1 2002.1.1 1-264 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990168 Q87GN6_nD1 601.1.1 1-118 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002990169 Q87JG4_nD1 1079.1.1 6-200 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002990170 Q87LK4_nD1 2498.1.1 6-110 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990171 Q87LK4_nD2 375.1.1 111-165 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002990172 Q87LC5_nD4 246.3.1 281-400 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002990173 Q87LC5_nD3 2484.1.1 1-35,211-280 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990174 Q87LC5_nD1 2.1.1 36-120 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990175 Q87LC5_nD5 3617.1.1 406-489 'Thioredoxin-like domain in RNase E' 'Thioredoxin-like domain in RNase E' 'Thioredoxin-like domain in RNase E' 'a+b three layers' 002990176 Q87LC5_nD2 212.1.1 121-210 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002990177 Q87RT7_nD1 301.3.1 146-305 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002990178 Q87IG6_nD1 11.1.4 26-190 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990179 Q87NB7_nD1 221.1.2 1-60 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002990180 Q87NB7_nD2 304.102.1 61-245 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002990181 Q87LN1_nD2 278.1.1 241-350 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'a+b complex topology' 002990182 Q87LN1_nD1 2003.1.2 6-240,351-415 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990183 Q87LN1_nD3 604.2.1 421-535 'Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain' 'Spectrin repeat-like' 'alpha bundles' 002990184 Q87HJ2_nD2 7581.1.1 176-364 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002990185 Q87HJ2_nD1 7581.1.1 6-175 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002990186 Q87PF4_nD1 101.1.4 1-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990187 Q87GX8_nD1 2006.1.1 1-200 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990188 Q87RF0_nD4 7522.1.1 801-935 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'a/b three-layered sandwiches' 002990189 Q87RF0_nD3 7574.1.1 541-800 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002990190 Q87RF0_nD1 323.1.1 21-48 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002990191 Q87RF0_nD2 7574.1.1 86-540 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002990192 Q87MK3_nD3 101.1.1 166-240 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990193 Q87MK3_nD1 142.1.1 6-90 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002990194 Q87MK3_nD2 101.1.1 91-165 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990195 Q87HC6_nD4 109.4.1 651-765 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990196 Q87HC6_nD7 11.2.1 1046-1155 'C2 domain' 'C2 domain' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990197 Q87HC6_nD3 109.4.1 491-650 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990198 Q87HC6_nD5 141.1.1 671-685,766-805,856-940 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002990199 Q87HC6_nD2 2004.1.1 111-470 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990200 Q87HC6_nD6 601.45.1 941-1045,1156-1170 'Type VI secretion protein IcmF helical domain' 'Type VI secretion protein IcmF helical domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002990201 Q87HC6_nD1 109.4.1 1-80 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990202 Q87SS1_nD1 7584.1.1 6-175 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002990203 Q87SS1_nD2 604.3.1 286-335 'BAG domain' 'BAG domain' 'Spectrin repeat-like' 'alpha bundles' 002990204 Q87SS1_nD3 323.1.1 176-285,336-460 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002990205 Q87SS1_nD4 327.5.1 461-595 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990206 Q87S00_nD2 7523.1.1 96-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990207 Q87S00_nD1 101.1.2 1-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002990208 Q87QP8_nD3 7523.1.1 166-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990209 Q87QP8_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002990210 Q87QP8_nD2 7523.1.1 86-165,266-324 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990211 Q87N97_nD1 5069.1.1 1-130 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002990212 Q87N97_nD2 601.1.1 131-225 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002990213 Q87P32_nD2 4040.1.1 216-385 'Fic-like' 'Fic-like' 'Fic-like' 'alpha bundles' 002990214 Q87P32_nD1 3229.1.1 86-215 'N-terminal domain in adenosine monophosphate-protein transferase vopS' 'N-terminal domain in adenosine monophosphate-protein transferase vopS' 'N-terminal domain in adenosine monophosphate-protein transferase vopS' 'alpha bundles' 002990215 Q87G53_nD3 209.1.1 276-480 'C-type lectin-like' 'C-type lectin-like' 'C-type lectin-like' 'a+b complex topology' 002990216 Q87G53_nD1 11.1.4 31-220 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990217 Q87G53_nD2 UNASSIGNED 226-263 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990218 Q87I43_nD2 605.1.1 316-365 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990219 Q87I43_nD1 223.1.1 11-310 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990220 Q87I43_nD3 225.1.1 366-524 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990221 Q87PS5_nD1 5051.1.1 6-400 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990222 Q87IF7_nD1 2498.1.1 56-195 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990223 Q87QH6_nD1 3291.1.1 1-155 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002990224 Q87QH6_nD2 632.22.1 161-220 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002990225 Q87LQ6_nD1 2003.1.5 6-205 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990226 Q87GN8_nD4 4168.1.1 156-220 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990227 Q87GN8_nD3 605.1.1 126-155 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990228 Q87GN8_nD6 225.1.1 276-428 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990229 Q87GN8_nD1 109.4.1 1-30 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990230 Q87GN8_nD5 605.1.1 221-275 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990231 Q87GN8_nD2 223.1.1 31-125 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990232 Q87SS3_nD1 7512.1.1 1-340 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990233 Q87H75_nD1 374.1.1 1-39 'HIPIP (high potential iron protein)' 'HIPIP (high potential iron protein)' 'HIPIP (high potential iron protein)' 'few secondary structure elements' 002990234 Q87HL5_nD1 6155.1.1 6-65 'SWEET transporter' 'SWEET transporter' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002990235 Q87PV6_nD1 2.7.1 21-160 'Tail-associated lysozyme gp5-N' 'Tail-associated lysozyme gp5-N' 'OB-fold' 'beta barrels' 002990236 Q87FI3_nD2 2003.1.1 131-295 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990237 Q87FI3_nD1 236.1.1 1-130,296-330 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002990238 Q87RW6_nD1 274.1.1 31-130 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002990239 Q87FJ9_nD2 2005.2.1 176-355 'YdcF' 'YdcF' 'HUP domain-like' 'a/b three-layered sandwiches' 002990240 Q87FJ9_nD1 109.4.1 36-175 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990241 Q87GL3_nD1 7579.1.1 36-110,176-315 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002990242 Q87GL3_nD2 2002.1.1 316-500 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990243 Q87LC7_nD1 246.1.1 1-270 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002990244 Q87SX0_nD1 4081.1.1 31-105,151-209 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'beta sandwiches' 002990245 Q87IW5_nD4 3834.1.1 266-305,496-535 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002990246 Q87IW5_nD3 4168.1.1 206-265 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990247 Q87IW5_nD1 5043.2.1 6-40,186-205 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002990248 Q87IW5_nD5 3291.1.1 306-495 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002990249 Q87IW5_nD2 601.4.1 41-185 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002990250 Q87LE2_nD1 1004.1.1 21-45 'RNA polymerase sigma-54 factor N-terminal region' 'RNA polymerase sigma-54 factor N-terminal region' 'RNA polymerase sigma-54 factor N-terminal region' 'extended segments' 002990251 Q87LE2_nD2 101.1.20 121-275 'Sigma54 core-binding domain' 'HTH' 'HTH' 'alpha arrays' 002990252 Q87LE2_nD3 101.1.1 276-425 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990253 Q87LE2_nD4 101.1.2 426-485 'winged' 'HTH' 'HTH' 'alpha arrays' 002990254 P59494_nD1 5084.5.2 26-430 'Maltoporin-like' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990255 Q87K98_nD4 102.1.1 556-620 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002990256 Q87K98_nD3 3265.1.1 461-555 'C-terminal helical domain in tRNA modifying enzyme GidA' 'C-terminal helical domain in tRNA modifying enzyme GidA' 'C-terminal helical domain in tRNA modifying enzyme GidA' 'alpha arrays' 002990257 Q87K98_nD2 244.1.1 201-340 'FAD-linked reductases-C' 'FAD-linked reductases-C' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002990258 Q87K98_nD1 2003.1.2 6-200,341-460 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990259 Q87R97_nD2 244.1.1 181-280 'FAD-linked reductases-C' 'FAD-linked reductases-C' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002990260 Q87R97_nD1 2003.1.2 6-180,281-410 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990261 Q03475_nD4 601.50.1 36-65,271-395 'Flagellar cap protein FliD helical bundle domain' 'Flagellar cap protein FliD helical bundle domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002990262 Q03475_nD3 601.51.1 6-35,396-445 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002990263 Q03475_nD1 3019.1.1 96-215 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002990264 Q03475_nD2 3943.1.1 66-95,216-265 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'beta sandwiches' 002990265 Q87KV6_nD1 5051.1.1 1-505 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990266 Q87JY3_nD3 101.1.3 291-380 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002990267 Q87JY3_nD1 223.1.1 1-130 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990268 Q87JY3_nD2 304.48.1 131-290 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990269 Q87LE0_nD1 311.1.1 1-145 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002990270 Q87Q99_nD1 2003.1.2 1-115,246-319 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990271 Q87Q99_nD2 2003.1.2 116-245 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990272 Q87GI3_nD1 9.1.1 31-160 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002990273 Q87JC0_nD1 5050.1.1 6-195 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990274 Q87JC0_nD2 5050.1.1 196-395 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990275 Q87MF6_nD1 304.5.1 1-114 'GlnB-like' 'GlnB-like' 'Alpha-beta plaits' 'a+b two layers' 002990276 Q87Q52_nD1 2492.1.1 6-180 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002990277 Q87Q52_nD2 2492.1.1 171-295 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002990278 Q87GM3_nD1 2002.1.1 1-330 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990279 Q87JM0_nD1 3950.1.1 1-418 'Bacterial vitamin C transporter UlaA/SgaT' 'Bacterial vitamin C transporter UlaA/SgaT' 'Bacterial vitamin C transporter UlaA/SgaT' 'alpha complex topology' 002990280 Q87GC1_nD1 2008.1.1 6-140 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002990281 Q87GC1_nD2 101.1.2 141-220 'winged' 'HTH' 'HTH' 'alpha arrays' 002990282 Q87IN0_nD1 257.1.1 6-255 'Aromatic aminoacid monoxygenases, catalytic and oligomerization domains' 'Aromatic aminoacid monoxygenases, catalytic and oligomerization domains' 'Aromatic aminoacid monoxygenases, catalytic and oligomerization domains' 'a+b complex topology' 002990283 Q87PU9_nD1 2499.2.1 31-155 'Domain III of tail sheath protein Gp18' 'Domain III of tail sheath protein Gp18' 'Subtilisin-like' 'a/b three-layered sandwiches' 002990284 Q87K39_nD2 304.48.1 181-365 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990285 Q87K39_nD1 7002.1.1 6-180 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'alpha duplicates or obligate multimers' 002990286 Q87RQ9_nD1 304.52.1 6-90 'YbeD/HP0495-like' 'YbeD/HP0495-like' 'Alpha-beta plaits' 'a+b two layers' 002990287 Q87KJ8_nD3 304.48.1 401-590 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990288 Q87KJ8_nD4 2002.5.1 591-828 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002990289 Q87KJ8_nD1 301.7.1 1-190,281-360 'YjgF-like' 'YjgF-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002990290 Q87KJ8_nD2 1.1.7 191-280 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990291 Q87PR2_nD1 2484.1.1 16-215,486-495 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990292 Q87PR2_nD2 2484.1.1 221-395,426-485 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990293 Q87PR2_nD3 511.1.1 496-635 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'beta sandwiches' 002990294 Q87JI4_nD2 4167.1.1 86-220 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'beta complex topology' 002990295 Q87JI4_nD1 3747.1.1 1-45,66-85,221-260 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002990296 Q87I67_nD2 304.48.1 6-25,276-455 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990297 Q87I67_nD1 223.1.1 26-275 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990298 Q87GT3_nD1 3538.1.1 6-204 'MerF' 'MerF' 'MerF' 'extended segments' 002990299 Q87LY0_nD1 223.1.1 16-375 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990300 Q87LY0_nD6 101.1.4 1026-1128 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990301 Q87LY0_nD2 4168.1.1 376-440 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990302 Q87LY0_nD5 2007.1.3 721-970,996-1020 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990303 Q87LY0_nD3 605.1.1 456-530 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990304 Q87LY0_nD4 225.1.1 531-700 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990305 Q87K29_nD1 221.1.3 16-153 'Sulfite oxidase, middle catalytic domain' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002990306 Q87K24_nD1 2484.1.1 26-235 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990307 Q87LD7_nD2 282.1.1 131-270 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002990308 Q87LD7_nD1 109.13.1 6-130 'MgtE N-terminal domain-like' 'MgtE N-terminal domain-like' 'Repetitive alpha hairpins' 'alpha superhelices' 002990309 Q87LD7_nD3 5079.1.1 271-450 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'alpha duplicates or obligate multimers' 002990310 Q87LU0_nD1 285.1.1 1-183 'N-acetylmuramoyl-L-alanine amidase-like' 'N-acetylmuramoyl-L-alanine amidase-like' 'N-acetylmuramoyl-L-alanine amidase-like' 'a+b three layers' 002990311 Q87QK1_nD1 246.2.1 1-240 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002990312 Q87MK8_nD1 2004.1.1 1-205 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990313 Q87KC9_nD1 5001.1.1 6-215 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002990314 Q87N90_nD2 206.1.1 186-395 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990315 Q87N90_nD1 207.1.1 6-185 'Leucine-rich repeats' 'Leucine-rich repeats' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002990316 Q87IH9_nD1 5040.1.1 26-115 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'extended segments' 002990317 Q87IH9_nD2 3156.1.1 116-280 'Cupredoxin-related' 'Cupredoxin-related' 'Cupredoxin-like' 'beta sandwiches' 002990318 Q87I71_nD2 10.18.1 236-483 'VPA0735-like' 'VPA0735-like' 'jelly-roll' 'beta sandwiches' 002990319 Q87I71_nD1 10.18.1 26-235 'VPA0735-like' 'VPA0735-like' 'jelly-roll' 'beta sandwiches' 002990320 Q87L52_nD1 2002.1.1 1-295 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990321 Q87QT0_nD4 605.1.1 351-415 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990322 Q87QT0_nD3 4168.1.1 276-350 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990323 Q87QT0_nD7 150.1.1 736-805 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002990324 Q87QT0_nD5 225.1.1 416-585 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990325 Q87QT0_nD2 223.1.1 31-270 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990326 Q87QT0_nD6 2007.1.3 586-730 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990327 Q87QT0_nD1 5043.2.1 6-30 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002990328 Q87PK9_nD1 2488.1.1 6-15,51-245 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002990329 Q87TG7_nD1 2002.1.1 1-253 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990330 Q87GB3_nD1 5084.5.1 66-435 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990331 Q87MQ2_nD4 327.14.1 576-700 'C-terminal domain of DNA Polymerase III subunit tau' 'C-terminal domain of DNA Polymerase III subunit tau' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990332 Q87MQ2_nD3 138.1.1 246-360 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'alpha arrays' 002990333 Q87MQ2_nD1 2004.1.1 6-175 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990334 Q87MQ2_nD2 148.1.3 176-240 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990335 Q87MS9_nD1 2486.1.1 6-560 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002990336 Q87P81_nD1 109.4.1 1-658 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990337 Q87S19_nD1 102.1.1 6-65 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002990338 Q87S19_nD2 2002.1.1 66-360 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990339 Q87KI2_nD1 1.1.7 1-100 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990340 Q87KI2_nD2 7514.1.1 101-235 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002990341 Q87GJ3_nD1 284.2.1 56-95 'Chitinase insertion domain' 'Chitinase insertion domain' 'FKBP-like' 'a+b two layers' 002990342 Q87N50_nD2 7523.1.1 81-135,251-375,601-665 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990343 Q87N50_nD1 304.136.1 136-250 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002990344 Q87N50_nD3 7523.1.1 376-600 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990345 Q87P73_nD1 286.1.1 11-185 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002990346 Q87P73_nD2 286.1.1 186-380 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002990347 Q87NM9_nD1 601.7.1 6-160 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002990348 Q87IM6_nD1 3438.1.1 11-120 'Unknown function protein VPA0580' 'Unknown function protein VPA0580' 'Unknown function protein VPA0580' 'alpha arrays' 002990349 Q87PN3_nD2 7512.1.1 181-335 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990350 Q87PN3_nD1 7512.1.1 6-180,336-355 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990351 Q87RE3_nD1 5.1.4 21-320 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002990352 Q87RE3_nD6 101.1.1 1021-1075 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990353 Q87RE3_nD2 5.1.4 321-630 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002990354 Q87RE3_nD5 225.1.1 856-995 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990355 Q87RE3_nD3 11.1.1 631-735 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990356 Q87RE3_nD7 101.1.6 1076-1125 'TrpR' 'HTH' 'HTH' 'alpha arrays' 002990357 Q87RE3_nD4 4207.1.2 736-770,791-850 'MED7 hinge region' 'Mediator hinge subcomplex-like' 'Mediator hinge subcomplex-like' 'alpha duplicates or obligate multimers' 002990358 Q87QW9_nD3 2007.1.2 161-295,321-334 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990359 Q87QW9_nD1 101.1.4 1-45 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990360 Q87QW9_nD2 2007.1.2 46-160,296-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990361 Q87PC7_nD4 3010.1.1 421-530 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'a/b three-layered sandwiches' 002990362 Q87PC7_nD3 212.1.1 291-420 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002990363 Q87PC7_nD1 2004.1.1 6-200 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990364 Q87PC7_nD2 148.1.3 201-290 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990365 Q87JW5_nD1 7523.1.1 116-180 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990366 Q87JW5_nD2 7523.1.1 26-115,181-315 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990367 Q87MK4_nD1 601.3.1 6-135 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002990368 Q87MK4_nD2 605.1.1 356-415 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990369 Q87MK4_nD4 2.10.1 606-740 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002990370 Q87MK4_nD3 225.1.1 416-600 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990371 Q87P22_nD1 3070.1.1 41-115 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002990372 Q87P22_nD5 327.16.1 576-615 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990373 Q87P22_nD2 327.16.1 116-180 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990374 Q87P22_nD4 327.16.1 301-340,361-545 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990375 Q87P22_nD3 327.16.1 181-300 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990376 Q87K14_nD1 5051.1.1 6-490,526-560 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990377 Q87K14_nD2 4070.1.1 511-525,561-579 'FtsH protease domain-like' 'FtsH protease domain-like' 'FtsH protease domain-like' 'alpha arrays' 002990378 Q87T20_nD1 210.1.1 1-175 'Proteasome subunits' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002990379 Q87SB3_nD2 5104.1.1 326-455 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'a+b three layers' 002990380 Q87SB3_nD1 2006.1.2 6-325 'DHH phosphoesterases' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990381 Q87SB3_nD3 2.1.1 461-579 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990382 Q87PB1_nD3 2486.1.1 341-665 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002990383 Q87PB1_nD1 3694.1.1 26-240 'Tail specific protease helical domain' 'Tail specific protease helical domain' 'Tail specific protease helical domain' 'alpha bundles' 002990384 Q87PB1_nD2 7.1.1 241-340 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002990385 Q87HH4_nD5 11.1.1 511-595 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990386 Q87HH4_nD2 2498.1.1 51-235 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990387 Q87HH4_nD1 2498.1.1 21-45 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990388 Q87HH4_nD4 11.1.1 396-500 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990389 Q87HH4_nD3 5090.2.1 236-385 'Immune inhibitor A metallopeptidase C-terminal domain' 'Immune inhibitor A metallopeptidase C-terminal domain' 'Viral glycoprotein, central and dimerisation domains-like' 'beta complex topology' 002990390 Q87TC2_nD1 7579.1.1 6-255 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002990391 Q87NH7_nD1 3986.2.1 21-85 'Antitoxin Dmd' 'Antitoxin Dmd' 'GTP-binding protein lepA C-terminal domain-like' 'a+b two layers' 002990392 Q87JJ4_nD2 601.4.1 171-275 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002990393 Q87JJ4_nD1 2007.1.2 1-170 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990394 Q87JU4_nD1 2484.6.1 51-130 'Periplasmic domain of ExbD/TolR' 'Periplasmic domain of ExbD/TolR' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990395 Q87K30_nD1 601.4.1 51-165 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002990396 Q87K30_nD2 5043.2.1 16-50,171-205 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002990397 Q87K30_nD3 304.48.1 206-363 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990398 Q87ST2_nD3 650.1.1 216-280 'Chaperone J-domain' 'Chaperone J-domain' 'Chaperone J-domain' 'alpha bundles' 002990399 Q87ST2_nD1 3470.1.1 6-35 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002990400 Q87ST2_nD2 4198.1.1 56-195 'TerB-like' 'TerB-like' 'TerB-like' 'alpha arrays' 002990401 Q87G64_nD2 601.7.1 51-150 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002990402 Q87G64_nD1 5042.1.1 26-50 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'extended segments' 002990403 Q87TF0_nD2 225.1.1 191-348 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002990404 Q87TF0_nD1 223.1.1 6-190 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990405 Q87L37_nD1 5.1.4 21-328 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002990406 Q87RR5_nD1 4200.1.1 48-299 'YmcC-like' 'YmcC-like' 'YmcC-like' 'beta barrels' 002990407 Q87SV0_nD1 7523.1.1 26-120,256-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990408 Q87SV0_nD2 7523.1.1 121-255 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990409 Q87GH3_nD1 192.8.1 21-95 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002990410 Q87N13_nD1 3226.1.1 11-400 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002990411 Q87N13_nD2 2496.1.1 401-515 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002990412 Q87J80_nD2 2004.1.1 126-275 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990413 Q87J80_nD1 2004.1.1 6-120 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990414 Q87K73_nD1 2485.1.1 1-105 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990415 Q87PH3_nD1 2004.1.1 6-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990416 Q87PH3_nD2 2.4.1 251-375 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002990417 Q87L94_nD1 3236.1.1 1-440 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002990418 Q87NR1_nD1 324.1.1 1-130 'OsmC-like' 'OsmC-like' 'OsmC-like' 'a+b two layers' 002990419 Q87Q98_nD1 10.12.1 6-215 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002990420 Q87J13_nD1 101.1.2 1-60 'winged' 'HTH' 'HTH' 'alpha arrays' 002990421 Q87J13_nD2 2002.1.1 61-460 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990422 Q87HX7_nD2 4002.1.1 176-380 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002990423 Q87HX7_nD1 2007.1.7 6-175 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990424 Q87FQ2_nD1 2485.1.1 21-204 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990425 Q87S99_nD1 2498.1.1 16-385 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990426 Q87QU5_nD1 5069.1.1 1-360 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002990427 Q87GB4_nD3 7012.1.1 271-460 'Monotopic phosphoglycosyl transferase (PGT)-like' 'Monotopic phosphoglycosyl transferase (PGT)-like' 'Monotopic phosphoglycosyl transferase (PGT)-like' 'a+b complex topology' 002990428 Q87GB4_nD2 2003.1.1 136-250 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990429 Q87GB4_nD1 4953.1.1 11-135 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002990430 Q87GX7_nD1 330.3.1 1-130 'Peptidyl-tRNA hydrolase domain-like' 'Peptidyl-tRNA hydrolase domain-like' 'dsRBD-like' 'a+b two layers' 002990431 Q87HC8_nD1 210.2.1 1-240 'Protein serine/threonine phosphatase 2C, catalytic domain' 'Protein serine/threonine phosphatase 2C, catalytic domain' 'Ntn/PP2C' 'a+b four layers' 002990432 Q87J14_nD1 3226.1.1 22-470 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002990433 Q87TP6_nD1 3921.1.1 1-184 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'alpha complex topology' 002990434 Q87Q00_nD1 10.12.1 6-240 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002990435 Q87Q00_nD2 10.12.1 241-375 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002990436 Q87JY9_nD1 3170.1.1 1-105 'uncharacterized protein YP_926445.1' 'uncharacterized protein YP_926445.1' 'uncharacterized protein YP_926445.1' 'a+b two layers' 002990437 Q87TQ6_nD2 227.1.1 121-245 'DNA clamp' 'DNA clamp' 'DNA clamp' 'a+b two layers' 002990438 Q87TQ6_nD1 227.1.1 1-120 'DNA clamp' 'DNA clamp' 'DNA clamp' 'a+b two layers' 002990439 Q87TQ6_nD3 227.1.1 246-365 'DNA clamp' 'DNA clamp' 'DNA clamp' 'a+b two layers' 002990440 Q87MF2_nD6 3585.1.1 1081-1159 'DNA polymerase III C-terminal domain' 'DNA polymerase III C-terminal domain' 'DNA polymerase III C-terminal domain' 'a+b two layers' 002990441 Q87MF2_nD1 2002.1.1 6-270 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990442 Q87MF2_nD2 316.1.1 271-560 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002990443 Q87MF2_nD5 2.1.1 966-1075 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990444 Q87MF2_nD3 3584.1.1 561-775 'DNA polymerase III finger domain' 'DNA polymerase III finger domain' 'DNA polymerase III finger domain' 'alpha arrays' 002990445 Q87MF2_nD4 102.1.1 781-960 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002990446 Q87L33_nD1 284.1.1 1-70,126-185 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002990447 Q87L33_nD2 284.4.1 71-125 'Archaeal FKBP insertion domain' 'Archaeal FKBP insertion domain' 'FKBP-like' 'a+b two layers' 002990448 Q87HE9_nD2 5050.1.1 196-370 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990449 Q87HE9_nD1 5050.1.1 6-185 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990450 Q79YX9_nD1 5056.1.1 51-80 'Gated mechanosensitive channel' 'Gated mechanosensitive channel' 'Gated mechanosensitive channel' 'extended segments' 002990451 Q87ME2_nD1 3896.1.1 1-280 'Intramembrane CDP-DAG synthetase' 'Intramembrane CDP-DAG synthetase-related' 'Intramembrane CDP-DAG synthetase-related' 'alpha duplicates or obligate multimers' 002990452 Q87R12_nD1 4336.1.1 166-235 'YheA/YmcA-like' 'YheA/YmcA-like' 'YheA/YmcA-like' 'alpha duplicates or obligate multimers' 002990453 Q87R12_nD2 2006.1.6 31-40,126-165,236-423 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990454 Q87HF4_nD1 7577.1.1 1-250 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990455 Q87HF4_nD2 3016.1.1 251-334 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002990456 Q87IJ8_nD4 304.9.1 471-540 'RNA-binding domain, RBD' 'RNA-binding domain, RBD' 'Alpha-beta plaits' 'a+b two layers' 002990457 Q87IJ8_nD3 3676.1.1 376-435 'RNA helicase Hera dimerization domain' 'RNA helicase Hera dimerization domain' 'RNA helicase Hera dimerization domain' 'alpha duplicates or obligate multimers' 002990458 Q87IJ8_nD1 2004.1.1 1-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990459 Q87IJ8_nD2 2004.1.1 216-375,441-470 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990460 Q87RP5_nD1 327.11.2 6-100 'Eukaryotic type KH-domain (KH-domain type I)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990461 Q87RP5_nD2 2004.1.1 111-360 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990462 Q87KT5_nD1 5051.1.1 6-435 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990463 Q87MR9_nD1 4300.1.1 46-80 'Viral glycoprotein ectodomain-like' 'Viral glycoprotein ectodomain-like' 'Viral glycoprotein ectodomain-like' 'beta complex topology' 002990464 Q87TI9_nD3 148.1.3 316-385 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990465 Q87TI9_nD4 101.1.1 391-445 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990466 Q87TI9_nD2 2004.1.1 136-315 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990467 Q87TI9_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990468 Q87I09_nD1 6099.1.1 1-85 'Uncharacterized protein VV2_0175' 'Uncharacterized protein VV2_0175' 'Uncharacterized protein VV2_0175' 'alpha arrays' 002990469 Q87RA8_nD2 602.1.1 206-310,331-515 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'L-aspartase middle domain-like' 'alpha arrays' 002990470 Q87RA8_nD1 4952.1.1 6-55,76-205 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'L-aspartase N-terminal domain-like' 'alpha arrays' 002990471 Q87GC7_nD2 304.51.1 96-198 'CRISPR transcript (pre-crRNA) processing endoribonuclease-related' 'CRISPR transcript (pre-crRNA) processing endoribonuclease-related' 'Alpha-beta plaits' 'a+b two layers' 002990472 Q87GC7_nD1 304.51.1 1-95 'CRISPR transcript (pre-crRNA) processing endoribonuclease-related' 'CRISPR transcript (pre-crRNA) processing endoribonuclease-related' 'Alpha-beta plaits' 'a+b two layers' 002990473 Q87MH8_nD1 328.5.1 1-80 'SirA-like' 'SirA-like' 'IF3-like' 'a+b two layers' 002990474 Q87L45_nD5 304.24.1 606-695 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990475 Q87L45_nD2 1.1.7 291-405 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990476 Q87L45_nD1 2004.1.1 6-290 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990477 Q87L45_nD4 212.1.1 486-605 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002990478 Q87L45_nD3 304.24.1 411-485 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990479 Q87J28_nD1 3758.2.1 1-205 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002990480 Q87P96_nD2 1075.3.1 17-85,156-360 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990481 Q87P96_nD1 3281.1.1 86-155 'NADH-quinone oxidoreductase subunit L (NuoL)-related' 'Sodium/proton antiporter subunits-like' 'Sodium/proton antiporter subunits-like' 'alpha complex topology' 002990482 Q87II9_nD1 2486.1.1 21-265 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002990483 Q87II9_nD2 2486.1.1 271-534 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002990484 Q87JW9_nD1 180.1.1 6-235 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'alpha bundles' 002990485 Q87KL0_nD1 243.3.1 36-125 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002990486 Q87NN9_nD1 101.1.11 1-85 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002990487 Q87KH9_nD2 109.4.1 141-330 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990488 Q87KH9_nD1 109.4.1 31-140 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990489 Q87KS5_nD1 UNASSIGNED 36-70 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990490 Q87KS5_nD2 876.1.1 81-170 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'a+b complex topology' 002990491 Q87KS5_nD3 148.1.3 181-355 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990492 Q87T90_nD2 191.1.1 61-195 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002990493 Q87T90_nD1 101.1.1 6-60 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990494 Q79YX3_nD1 2004.1.1 1-259 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990495 Q87JT3_nD1 2007.1.14 26-190 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990496 Q87JT3_nD2 2007.1.14 191-289 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990497 Q87MP8_nD2 210.2.1 171-365 'Protein serine/threonine phosphatase 2C, catalytic domain' 'Protein serine/threonine phosphatase 2C, catalytic domain' 'Ntn/PP2C' 'a+b four layers' 002990498 Q87MP8_nD1 2007.1.3 11-170 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990499 Q87SC1_nD1 5051.1.1 16-470 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990500 Q87TI2_nD1 150.1.1 6-140 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002990501 Q87R44_nD1 301.1.1 1-90 'L30e-like' 'L30e-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002990502 Q87R44_nD2 2488.1.1 91-244 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002990503 Q87LH8_nD2 279.1.1 171-435 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'a+b complex topology' 002990504 Q87LH8_nD1 2003.1.1 6-170 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990505 Q87HH1_nD1 2485.1.1 31-260 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990506 Q87Q53_nD2 206.1.3 106-390 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990507 Q87Q53_nD1 2003.1.10 1-105 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990508 Q87M18_nD3 304.24.1 391-525 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990509 Q87M18_nD1 2004.1.1 6-280 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990510 Q87M18_nD2 1.1.7 281-390 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990511 Q87KS4_nD1 876.1.1 6-110,141-165 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'a+b complex topology' 002990512 Q87KS4_nD2 109.3.1 186-325,356-375 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990513 Q87S08_nD2 2002.1.1 6-90,211-490 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990514 Q87S08_nD1 282.1.1 91-210 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002990515 Q87SD6_nD1 11.1.1 21-154 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990516 Q87HZ8_nD3 1.1.7 46-55,186-270 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990517 Q87HZ8_nD4 1.1.7 31-45,276-350 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990518 Q87HZ8_nD1 5086.1.1 91-150 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002990519 Q87HZ8_nD2 325.1.7 56-90,151-185 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990520 Q87M85_nD2 188.1.1 191-240 'Nuclear receptor ligand-binding domain' 'Nuclear receptor ligand-binding domain' 'Nuclear receptor ligand-binding domain' 'alpha arrays' 002990521 Q87M85_nD5 4.1.1 571-640 'SH3' 'SH3' 'SH3' 'beta barrels' 002990522 Q87M85_nD1 101.1.2 16-135 'winged' 'HTH' 'HTH' 'alpha arrays' 002990523 Q87M85_nD3 2004.1.1 136-205,241-455,706-715 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990524 Q87M85_nD4 2004.1.1 456-570,641-705 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990525 Q87PZ7_nD1 2008.1.1 36-160 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002990526 Q87PZ7_nD2 375.1.1 171-210 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002990527 Q87L92_nD1 2005.1.1 26-245 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002990528 Q87HH8_nD2 2003.1.2 111-245 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990529 Q87HH8_nD5 101.32.1 486-555 'bacterioferritin-associated ferredoxin' 'bacterioferritin-associated ferredoxin' 'HTH' 'alpha arrays' 002990530 Q87HH8_nD6 304.37.1 556-630,791-835 'Sulfite reductase, domains 1 and 3' 'Sulfite reductase, domains 1 and 3' 'Alpha-beta plaits' 'a+b two layers' 002990531 Q87HH8_nD1 2003.1.2 1-110,246-320,411-420 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990532 Q87HH8_nD3 244.2.1 321-405 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002990533 Q87HH8_nD7 296.1.1 631-790 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'a+b three layers' 002990534 Q87HH8_nD4 101.32.1 421-475 'bacterioferritin-associated ferredoxin' 'bacterioferritin-associated ferredoxin' 'HTH' 'alpha arrays' 002990535 Q87HG5_nD4 3755.3.1 306-435,456-485 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990536 Q87HG5_nD3 4168.1.1 206-265 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990537 Q87HG5_nD1 5043.2.1 6-35,186-205 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002990538 Q87HG5_nD5 3834.1.1 266-305,486-543 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002990539 Q87HG5_nD2 601.4.1 41-170 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002990540 Q87JT9_nD3 11.1.1 146-275 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990541 Q87JT9_nD1 11.1.1 26-110 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990542 Q87JT9_nD2 UNASSIGNED 111-145 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990543 Q87G42_nD1 2011.2.1 1-235 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002990544 Q87L49_nD1 101.1.11 6-100 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002990545 Q87RC0_nD3 7523.1.1 161-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990546 Q87RC0_nD2 7523.1.1 91-160,271-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990547 Q87RC0_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002990548 Q87NC4_nD5 102.1.1 546-610 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002990549 Q87NC4_nD2 192.17.1 101-245 'Rabenosyn-5 Rab-binding domain-like' 'Rabenosyn-5 Rab-binding domain-like' 'Long alpha-hairpin' 'alpha bundles' 002990550 Q87NC4_nD1 821.1.1 11-95 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'a+b three layers' 002990551 Q87NC4_nD4 2484.1.1 376-545 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990552 Q87NC4_nD3 2484.1.1 251-375 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990553 Q87K70_nD1 208.1.1 6-205 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002990554 Q87GU1_nD1 5009.1.1 26-50 'Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)' 'Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)' 'Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)' 'extended segments' 002990555 Q87II2_nD1 2486.1.1 6-375 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002990556 Q87PZ8_nD2 109.1.1 86-220 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002990557 Q87PZ8_nD1 2485.1.1 6-85 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990558 Q87G68_nD1 3757.1.1 6-30,281-305 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002990559 Q87G68_nD2 223.1.1 31-280 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990560 Q87G68_nD3 4168.1.1 306-365 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990561 Q87G68_nD4 3755.3.1 366-630 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990562 Q87T65_nD1 7577.1.1 6-320 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990563 Q87T65_nD2 3016.1.1 321-439 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002990564 Q87G76_nD4 4292.2.1 456-525 'MAGUK binding stalk (MBS) domain' 'MAGUK binding stalk (MBS) domain' 'FlaG-like' 'a+b two layers' 002990565 Q87G76_nD3 5084.5.1 276-290,316-455 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990566 Q87G76_nD5 5084.5.1 541-730 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990567 Q87G76_nD2 11.1.1 51-65,216-275 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990568 Q87G76_nD1 11.1.1 71-210 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990569 Q87G76_nD6 5084.5.3 291-315,531-540,701-1170 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990570 Q87FK7_nD2 2004.1.1 251-505 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990571 Q87FK7_nD1 2004.1.1 6-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990572 Q87R73_nD1 131.1.1 6-435 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002990573 Q87NV4_nD1 5059.1.1 1-295 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002990574 Q87Q66_nD1 101.1.4 6-75 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990575 Q87Q66_nD2 101.1.2 76-230,251-260 'winged' 'HTH' 'HTH' 'alpha arrays' 002990576 Q87FH7_nD1 7523.1.1 22-325 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990577 Q87GB9_nD1 101.1.2 46-110 'winged' 'HTH' 'HTH' 'alpha arrays' 002990578 Q87LI0_nD3 2007.1.2 161-290,321-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990579 Q87LI0_nD1 101.1.4 1-50 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990580 Q87LI0_nD2 2007.1.2 56-160,291-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990581 Q87I36_nD1 237.1.1 1-155 'ADP-ribosylation' 'ADP-ribosylation' 'ADP-ribosylation' 'a+b complex topology' 002990582 Q87LW1_nD1 506.2.1 86-185 'UvrB interaction domain' 'UvrB interaction domain' 'Colicin E3 ribonuclease domain-like' 'beta meanders' 002990583 Q87LW1_nD2 235.1.1 46-85,186-390 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002990584 Q87LW1_nD4 223.3.1 391-485,596-780 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002990585 Q87LW1_nD3 4019.1.1 486-595 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002990586 Q87RK9_nD1 872.10.1 26-125 'Secreted protein HP1454 N-terminal domain' 'Secreted protein HP1454 N-terminal domain' 'Dodecin subunit-like' 'a+b two layers' 002990587 Q87IS8_nD1 11.9.1 1-204 'FAH' 'FAH' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990588 Q87KB9_nD3 7574.1.1 346-545 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002990589 Q87KB9_nD1 7574.1.1 1-175 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002990590 Q87KB9_nD2 2003.1.4 181-345 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990591 Q87SM4_nD1 310.2.1 1-130 'Ribosome recycling factor, RRF' 'Ribosome recycling factor, RRF' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002990592 Q87SM4_nD2 101.1.1 141-325 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990593 Q87SM4_nD3 101.1.1 326-385 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990594 Q87P19_nD2 101.1.1 176-220 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990595 Q87P19_nD1 10.12.1 16-175 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002990596 Q87P19_nD3 101.1.1 221-285 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990597 Q87PC9_nD1 206.1.3 21-90 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990598 Q87LP9_nD2 2007.1.1 276-540 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990599 Q87LP9_nD1 2004.1.1 1-275 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990600 Q87M46_nD1 2004.1.1 41-483 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990601 Q87RE0_nD1 4.1.1 1-75 'SH3' 'SH3' 'SH3' 'beta barrels' 002990602 Q87LC9_nD1 2006.1.4 6-155 'PIN domain-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990603 Q87LC9_nD2 1.1.9 166-245 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990604 Q87LC9_nD3 2004.1.1 156-165,246-458 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990605 Q87R29_nD1 7579.1.1 1-179 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002990606 Q87HJ3_nD1 7515.1.1 32-440 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002990607 Q87SL8_nD1 3498.1.1 6-95 'RNA polymerase sigma factor rpoD N-terminal domain' 'RNA polymerase sigma factor rpoD N-terminal domain' 'RNA polymerase sigma factor rpoD N-terminal domain' 'alpha arrays' 002990608 Q87SL8_nD2 142.1.1 101-195,216-455 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002990609 Q87SL8_nD3 101.1.1 456-615 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990610 Q87QZ7_nD1 1075.3.1 1-225 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990611 Q87HQ3_nD1 101.1.4 1-80 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990612 Q87I23_nD1 5067.1.1 11-145 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002990613 Q87R38_nD1 2011.2.1 6-250 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002990614 Q87QN1_nD1 2498.1.1 1-285 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990615 Q87PN5_nD2 7512.1.1 181-360 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990616 Q87PN5_nD1 7512.1.1 1-180,361-385 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990617 Q87RN9_nD1 2011.2.1 1-195 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002990618 Q87T89_nD2 2003.1.1 186-399 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990619 Q87T89_nD1 7564.1.1 1-180 'Homo-oligomeric flavin-containing Cys decarboxylases, HFCD' 'Homo-oligomeric flavin-containing Cys decarboxylases, HFCD' 'Homo-oligomeric flavin-containing Cys decarboxylases, HFCD' 'a/b three-layered sandwiches' 002990620 Q87JP1_nD2 708.1.2 211-380 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002990621 Q87JP1_nD1 304.3.2 31-210 'Peptide methionine sulfoxide reductase' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002990622 Q87TB1_nD5 1077.1.1 561-625 'RelA zinc-finger domain' 'RelA zinc-finger domain' 'RelA zinc-finger domain' 'few secondary structure elements' 002990623 Q87TB1_nD2 316.1.1 191-385 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002990624 Q87TB1_nD6 304.8.1 626-705 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002990625 Q87TB1_nD1 131.1.1 6-190 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002990626 Q87TB1_nD4 143.2.1 481-540 'Ribosomal protein L20' 'Ribosomal protein L20' 'PABP domain-like' 'alpha arrays' 002990627 Q87TB1_nD3 221.1.1 386-475 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002990628 Q87HW4_nD3 4168.1.1 141-200 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990629 Q87HW4_nD4 3755.3.1 231-435 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990630 Q87HW4_nD1 601.19.1 6-45,116-140 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002990631 Q87HW4_nD2 223.1.1 46-115 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990632 Q87HW4_nD5 3834.1.1 201-230,436-470 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002990633 Q87PH7_nD1 7523.1.1 16-130,251-325 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990634 Q87PH7_nD2 7523.1.1 131-250,326-340 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990635 Q87FP4_nD1 5051.1.1 6-435 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990636 Q87RE5_nD1 2004.1.1 1-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990637 Q87H71_nD1 604.39.1 26-175 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002990638 Q87NW4_nD4 304.48.1 271-445 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990639 Q87NW4_nD3 4168.1.1 216-270 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990640 Q87NW4_nD1 223.1.1 26-170 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990641 Q87NW4_nD5 2002.5.1 451-715 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002990642 Q87NW4_nD2 5043.2.1 6-25,191-215 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002990643 Q87PQ5_nD1 5084.5.1 26-240 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990644 Q87PQ5_nD2 5084.1.1 241-434 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002990645 Q87LX8_nD1 1075.3.1 1-30,61-325 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990646 Q87QP6_nD1 2003.1.11 1-130,306-370 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990647 Q87QP6_nD2 2003.1.1 131-305 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990648 Q87RF5_nD1 172.1.1 6-410 'Citrate synthase' 'Citrate synthase' 'Citrate synthase-like' 'alpha complex topology' 002990649 Q87R83_nD2 2004.1.1 141-315 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990650 Q87R83_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990651 Q87R83_nD4 101.1.1 381-440 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990652 Q87R83_nD3 148.1.3 316-380 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990653 Q87FJ0_nD1 2007.1.1 31-228 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990654 Q87ND9_nD1 139.2.1 28-475 'Di-heme elbow motif' 'Di-heme elbow motif' 'Multiheme cytochromes' 'few secondary structure elements' 002990655 Q87I45_nD2 7524.1.1 221-425 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002990656 Q87I45_nD1 7524.1.1 11-220,426-470 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002990657 Q87H85_nD2 310.2.1 131-155 'Ribosome recycling factor, RRF' 'Ribosome recycling factor, RRF' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002990658 Q87H85_nD1 6155.2.1 1-130,156-243 'PnuC' 'PnuC' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002990659 Q87K42_nD1 9.1.1 26-150 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002990660 Q87QU2_nD1 3758.2.1 6-225 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002990661 Q87RT8_nD1 605.1.1 6-60 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002990662 Q87S50_nD2 1079.1.1 501-555 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002990663 Q87S50_nD1 1075.3.1 16-500,556-734 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990664 Q87JK9_nD2 814.1.1 71-230 'Chorismate lyase' 'Chorismate lyase' 'Chorismate lyase' 'a+b two layers' 002990665 Q87JK9_nD1 101.1.2 1-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002990666 Q87KK2_nD1 2006.1.1 1-274 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002990667 Q87LI5_nD1 377.5.1 1-80 'YggX-like (Pfam 04362)' 'YggX-like (Pfam 04362)' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002990668 Q87MK9_nD1 1075.1.1 6-220 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990669 Q87QT4_nD1 109.3.1 1-138 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990670 Q87S91_nD2 1.1.7 186-310 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990671 Q87S91_nD1 2005.1.1 1-185 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002990672 Q87QQ0_nD1 150.1.2 11-255 'Heme oxygenase/Ribonucleotide reductase' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002990673 Q87HE8_nD1 10.12.1 6-150 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002990674 Q87HE8_nD2 101.1.1 151-200 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990675 Q87HE8_nD3 101.1.1 201-255 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990676 Q87T10_nD2 4.1.1 126-270 'SH3' 'SH3' 'SH3' 'beta barrels' 002990677 Q87T10_nD1 2.1.1 21-125 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990678 Q87RY5_nD2 101.1.2 106-190 'winged' 'HTH' 'HTH' 'alpha arrays' 002990679 Q87RY5_nD1 148.1.3 11-105 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990680 Q87NA3_nD1 304.4.1 1-98 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002990681 Q87T69_nD2 208.1.1 76-198 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002990682 Q87T69_nD1 2003.1.8 1-75 'MurCD/PglD N-terminal domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990683 Q87SB7_nD1 5051.1.1 6-425 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990684 Q87LM0_nD1 2003.1.7 11-200 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990685 Q87SR6_nD1 1.1.15 71-165 'PK beta-barrel domain-like' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990686 Q87SR6_nD2 2002.1.1 1-70,171-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990687 Q87SR6_nD3 7518.1.1 351-470 'PK C-terminal domain-like' 'PK C-terminal domain-like' 'PK C-terminal domain-like' 'a/b three-layered sandwiches' 002990688 Q87RB3_nD1 7581.1.1 6-240 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002990689 Q87RB3_nD2 7581.1.1 241-390 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002990690 Q87TN9_nD3 129.1.1 496-620 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002990691 Q87TN9_nD4 129.1.1 621-715 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002990692 Q87TN9_nD2 2003.1.1 311-495 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990693 Q87TN9_nD1 2486.1.1 1-310 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002990694 Q87FD0_nD4 325.1.8 196-210,231-270 'Ribosomal L27 protein' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990695 Q87FD0_nD3 4169.1.2 151-160,211-230 'Alpha-coronavirus spike protein receptor-binding domain' 'Coronavirus spike protein receptor-binding domain' 'Coronavirus spike protein receptor-binding domain' 'a+b three layers' 002990696 Q87FD0_nD6 627.1.1 431-500 'VPS9 domain' 'VPS9 domain' 'VPS9 domain' 'alpha complex topology' 002990697 Q87FD0_nD1 3922.1.1 41-70 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002990698 Q87FD0_nD5 207.6.1 271-430,501-559 'Serralysin-like metalloprotease-C' 'Serralysin-like metalloprotease-C' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002990699 Q87FD0_nD2 304.109.1 76-150 'Ribosomal proteins S24e, L23 and L15e' 'Ribosomal proteins S24e, L23 and L15e' 'Alpha-beta plaits' 'a+b two layers' 002990700 Q87HY5_nD1 1075.3.1 6-255 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990701 Q87KY4_nD2 278.1.1 226-360 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain' 'a+b complex topology' 002990702 Q87KY4_nD1 2003.1.2 1-225,361-440 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990703 Q87KY4_nD3 604.2.1 441-580 'Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain' 'Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain' 'Spectrin repeat-like' 'alpha bundles' 002990704 Q87RY1_nD1 331.3.1 1-140 'Bet v1-like' 'Bet v1-like' 'TBP-like' 'a+b two layers' 002990705 Q79YV4_nD1 101.1.1 6-80 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990706 Q79YV4_nD2 191.1.1 81-204 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002990707 Q87IX8_nD2 1.1.7 226-325 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990708 Q87IX8_nD1 129.1.1 1-225 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002990709 Q87IX8_nD3 7514.1.1 326-450 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002990710 Q87KR9_nD1 101.1.1 6-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990711 Q87KR9_nD2 101.1.2 71-135 'winged' 'HTH' 'HTH' 'alpha arrays' 002990712 Q87LQ7_nD1 325.1.6 46-95,187-305 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990713 Q87T29_nD1 601.14.1 6-130 'Hemerythrin' 'Hemerythrin' 'Four-helical up-and-down bundle' 'alpha bundles' 002990714 Q87K21_nD1 2003.1.1 1-253 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990715 Q87PF0_nD4 3755.3.1 416-445 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990716 Q87PF0_nD3 1042.1.1 296-395 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'a+b complex topology' 002990717 Q87PF0_nD5 3967.1.1 476-500 'Mitoribosomal protein mS26' 'Mitoribosomal protein mS26' 'Mitoribosomal protein mS26' 'extended segments' 002990718 Q87PF0_nD2 3365.1.1 141-220 'N-terminal domain of minor coat protein pIII' 'N-terminal domain of minor coat protein pIII' 'N-terminal domain of minor coat protein pIII' 'beta barrels' 002990719 Q87PF0_nD1 9.1.1 26-100 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002990720 Q87IV4_nD1 236.1.1 1-140,341-423 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002990721 Q87IV4_nD2 2003.1.1 141-340 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990722 Q87TI3_nD1 150.1.1 1-130 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002990723 Q87H77_nD1 3479.1.1 6-30 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002990724 Q87H77_nD2 223.1.1 31-255 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990725 Q87H77_nD5 2002.5.1 516-785 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002990726 Q87H77_nD3 4168.1.1 256-340 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990727 Q87H77_nD4 304.48.1 341-510 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990728 Q87IF8_nD1 304.53.1 1-105 'DOPA dioxygenase-like' 'DOPA dioxygenase-like' 'Alpha-beta plaits' 'a+b two layers' 002990729 Q87MT8_nD4 2008.1.1 126-140,381-600 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002990730 Q87MT8_nD3 4121.1.1 161-195,256-375 'CorA soluble domain-like' 'CorA soluble domain-like' 'CorA soluble domain-like' 'a+b three layers' 002990731 Q87MT8_nD1 11.1.1 1-125 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990732 Q87MT8_nD2 UNASSIGNED 196-250 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990733 Q87KA7_nD1 7519.1.1 1-288 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'a/b three-layered sandwiches' 002990734 Q87LA2_nD1 2007.1.3 1-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990735 Q87LA2_nD2 101.1.3 141-214 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002990736 Q87ML5_nD1 4009.1.1 21-95 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha bundles' 002990737 Q87HE2_nD3 1045.1.1 331-375 'Rad50-binding domain of Mre11' 'Rad50-binding domain of Mre11' 'Rad50-binding domain of Mre11' 'alpha bundles' 002990738 Q87HE2_nD2 3979.1.1 271-325 'Mre11 nuclease C-terminal domain' 'Mre11 nuclease C-terminal domain' 'Mre11 nuclease C-terminal domain' 'a+b four layers' 002990739 Q87HE2_nD1 246.2.1 1-270 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002990740 Q87NN6_nD1 213.1.1 1-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002990741 Q87T53_nD1 4200.1.1 31-225 'YmcC-like' 'YmcC-like' 'YmcC-like' 'beta barrels' 002990742 P65129_nD1 2.1.1 6-70 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990743 Q87GZ3_nD3 3342.1.1 426-703 'C-terminal domain in a putative lipoprotein BACOVA_00967' 'C-terminal domain in a putative lipoprotein BACOVA_00967' 'C-terminal domain in a putative lipoprotein BACOVA_00967' 'beta sandwiches' 002990744 Q87GZ3_nD1 5.1.3 21-260 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002990745 Q87GZ3_nD2 11.1.1 241-425 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990746 Q87I88_nD1 3457.1.1 6-145 'GxGD membrane protease' 'GxGD membrane protease' 'GxGD membrane protease' 'alpha bundles' 002990747 Q87NB6_nD1 207.6.1 6-170 'Serralysin-like metalloprotease-C' 'Serralysin-like metalloprotease-C' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002990748 Q87PI1_nD1 109.4.1 11-299 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990749 Q87QJ5_nD2 7523.1.1 91-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990750 Q87QJ5_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002990751 Q87SZ5_nD1 887.1.1 1-58 'Ribosomal protein L30p/L7e' 'Ribosomal protein L30p/L7e' 'Ribosomal protein L30p/L7e' 'a+b two layers' 002990752 Q87IR1_nD1 284.1.1 11-155 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002990753 Q87QJ8_nD1 2004.1.1 1-140 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990754 Q87QJ8_nD2 377.1.1 141-190 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002990755 Q87T44_nD1 7516.1.1 1-270 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002990756 Q87KT9_nD1 2004.1.1 1-520 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990757 Q87KT8_nD3 304.48.1 211-385 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002990758 Q87KT8_nD1 3860.1.1 21-50 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002990759 Q87KT8_nD2 223.1.1 71-210 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990760 Q87FW6_nD1 191.1.1 6-180 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002990761 Q87FR9_nD1 5052.1.1 6-415 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'alpha complex topology' 002990762 Q87QP9_nD2 109.4.1 226-250 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990763 Q87QP9_nD1 109.4.1 26-225 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990764 Q87IK3_nD1 222.1.1 76-225 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002990765 Q87KT6_nD4 275.1.1 561-710 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002990766 Q87KT6_nD3 3016.1.1 416-560 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002990767 Q87KT6_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990768 Q87KT6_nD2 7577.1.1 131-415 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990769 Q87HR1_nD1 213.1.1 6-125 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002990770 Q87JT4_nD1 5065.1.1 6-285 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002990771 Q87S05_nD1 235.1.1 77-345 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002990772 Q87S05_nD2 109.2.1 26-60,383-420 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002990773 Q87S05_nD4 64.3.1 526-570 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002990774 Q87S05_nD3 64.3.1 436-470 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002990775 Q87PX6_nD1 3355.1.1 26-485 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002990776 Q87GB1_nD2 304.58.1 61-120,156-260,391-445 'FepE-like' 'FepE-like' 'Alpha-beta plaits' 'a+b two layers' 002990777 Q87GB1_nD1 3470.1.1 21-60,446-475 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002990778 Q87GB1_nD3 3755.3.1 261-390 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990779 Q87GB1_nD4 2004.1.1 476-575 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990780 Q87I75_nD1 301.3.1 76-185 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002990781 Q87QV8_nD4 3921.1.1 326-460 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'alpha complex topology' 002990782 Q87QV8_nD3 129.1.1 6-30,306-325,461-485 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002990783 Q87QV8_nD1 10.20.1 41-115,256-275 'Jelly-roll domain in cysteine protease' 'Jelly-roll domain in cysteine protease' 'jelly-roll' 'beta sandwiches' 002990784 Q87QV8_nD2 219.1.1 116-255,276-285 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002990785 Q87FK4_nD1 281.1.1 6-235 'AraD-like aldolase/epimerase' 'AraD-like aldolase/epimerase' 'AraD-like aldolase/epimerase' 'a+b three layers' 002990786 Q87J05_nD3 310.2.1 371-495 'Ribosome recycling factor, RRF' 'Ribosome recycling factor, RRF' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002990787 Q87J05_nD2 246.3.1 81-370 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002990788 Q87J05_nD1 3761.1.1 1-60 'Major tropism determinant (Mtd) trimerization domain-related' 'Major tropism determinant (Mtd) trimerization domain-related' 'Major tropism determinant (Mtd) trimerization domain-related' 'beta duplicates or obligate multimers' 002990789 Q87T33_nD1 7516.1.1 1-285 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002990790 Q87QH8_nD1 304.136.1 66-185 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002990791 Q87QH8_nD2 7523.1.1 26-65,186-290,511-539 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990792 Q87QH8_nD3 7523.1.1 291-510 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990793 Q87JL4_nD2 3016.1.1 286-365 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002990794 Q87JL4_nD1 7577.1.1 1-300 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990795 Q87FR3_nD2 2485.1.1 61-235 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990796 Q87FR3_nD1 1095.1.1 26-60 'Copper resistance protein ScsC N-terminal region' 'Copper resistance protein ScsC N-terminal region' 'Copper resistance protein ScsC N-terminal region' 'extended segments' 002990797 Q87L71_nD1 2002.1.1 1-220 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990798 Q87JE8_nD1 4028.1.1 21-430 'Barrel domain in heme-dependent catalases' 'Barrel domain in heme-dependent catalases' 'Barrel domain in heme-dependent catalases' 'beta barrels' 002990799 Q87JE8_nD2 4048.1.1 431-500 'Second alpha-helical domain in heme-dependent catalases' 'Second alpha-helical domain in heme-dependent catalases' 'Second alpha-helical domain in heme-dependent catalases' 'alpha bundles' 002990800 Q87QJ0_nD2 5067.1.1 56-250 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002990801 Q87QJ0_nD1 5067.1.1 6-55 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002990802 Q87S13_nD1 5.1.11 26-385 '9-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002990803 Q87GX4_nD4 1.1.7 31-45,296-370 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990804 Q87GX4_nD3 1.1.7 46-55,206-295 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990805 Q87GX4_nD2 3922.1.1 96-165 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002990806 Q87GX4_nD1 325.1.7 56-95,166-205 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990807 Q87R20_nD1 2004.1.1 1-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990808 Q87R13_nD3 UNASSIGNED 406-445 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990809 Q87R13_nD4 286.1.1 446-510 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002990810 Q87R13_nD1 109.4.1 151-190,251-275 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002990811 Q87R13_nD2 2498.1.1 21-65,101-150,276-425 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990812 Q87M62_nD3 2007.1.2 161-295,321-335 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990813 Q87M62_nD1 101.1.4 6-50 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002990814 Q87M62_nD2 2007.1.2 51-160,296-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990815 Q56704_nD1 4292.1.1 66-140 'FlaG-related' 'FlaG-related' 'FlaG-like' 'a+b two layers' 002990816 Q87GH4_nD1 1180.1.1 126-170 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'alpha bundles' 002990817 Q87GH4_nD2 5061.1.1 51-105,146-243 'Preprotein translocase SecY subunit' 'Preprotein translocase SecY subunit' 'Preprotein translocase SecY subunit' 'alpha complex topology' 002990818 Q87KX5_nD1 1075.5.1 11-145 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990819 Q87FJ5_nD1 2485.1.1 1-100 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990820 Q87FJ5_nD2 2485.1.1 101-205 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002990821 Q87FJ5_nD4 2003.1.2 326-450 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990822 Q87FJ5_nD3 2003.1.2 206-325,451-520 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990823 Q87QX1_nD1 241.7.1 6-105 'YgaC/TfoX-N like' 'YgaC/TfoX-N like' 'Type III secretory system chaperone-like' 'a+b two layers' 002990824 Q87QX1_nD2 102.1.1 116-195 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002990825 Q87ST5_nD1 7510.1.1 6-150,291-330 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002990826 Q87ST5_nD2 7510.1.1 151-290 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002990827 Q87GW8_nD1 205.1.1 21-90 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002990828 Q87GW8_nD2 205.1.1 91-155 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002990829 Q87KF5_nD1 2002.1.1 6-375 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990830 Q87J25_nD1 4216.1.1 6-170 'Heme iron utilization protein-like' 'Heme iron utilization protein-like' 'Heme iron utilization protein-like' 'a+b duplicates or obligate multimers' 002990831 Q87GM6_nD1 2.1.1 6-70 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990832 Q87SB6_nD1 2007.2.1 1-170 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990833 Q87TE7_nD1 2004.1.1 1-175 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990834 Q87SY2_nD3 213.1.1 606-650 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002990835 Q87SY2_nD1 246.2.1 26-355 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002990836 Q87SY2_nD2 805.1.1 356-600 '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' 'a+b complex topology' 002990837 Q87HI3_nD1 206.1.1 6-235 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990838 Q87K88_nD1 4239.1.1 6-65 'DNA polymerase III theta subunit-like' 'DNA polymerase III theta subunit-like' 'DNA polymerase III theta subunit-like' 'alpha arrays' 002990839 Q87KX8_nD1 2002.1.1 16-335 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990840 Q87T06_nD1 325.1.5 1-135 'Ribosomal protein L10e' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990841 Q87P68_nD1 708.1.2 6-120 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002990842 Q87NS4_nD1 213.1.1 1-180 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002990843 Q87MH1_nD1 7573.1.1 1-208 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002990844 Q87HX9_nD3 148.1.3 291-365 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990845 Q87HX9_nD4 101.1.1 371-415 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990846 Q87HX9_nD1 2007.1.3 6-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990847 Q87HX9_nD2 2004.1.1 141-290 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990848 Q87QD3_nD2 5050.1.1 221-410 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990849 Q87QD3_nD1 5050.1.1 26-215 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990850 Q87QV2_nD1 2.1.1 1-110 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002990851 Q87QV2_nD2 314.1.1 116-290,421-565 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002990852 Q87QV2_nD3 329.1.1 291-420 'Prokaryotic AspRS, insert domain' 'Prokaryotic AspRS, insert domain' 'Prokaryotic AspRS, insert domain' 'a+b two layers' 002990853 Q87GB6_nD2 7523.1.1 136-280,356-390 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990854 Q87GB6_nD1 7523.1.1 26-135,281-355 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990855 Q87PE6_nD3 101.1.2 406-488 'winged' 'HTH' 'HTH' 'alpha arrays' 002990856 Q87PE6_nD1 2004.1.1 26-280 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990857 Q87PE6_nD2 148.1.3 1-25,281-405 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990858 Q87LR1_nD1 2004.1.1 6-270 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990859 Q87LR1_nD2 502.1.1 271-335 'Anti-LPS factor/recA domain' 'Anti-LPS factor/recA domain' 'Anti-LPS factor/recA domain' 'a+b two layers' 002990860 Q87PW5_nD1 3953.1.1 71-165 'Csd3 N-terminal domain' 'Csd3 N-terminal domain' 'Csd3 N-terminal domain' 'a+b two layers' 002990861 Q87PW5_nD2 325.1.6 166-324 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990862 Q87QG4_nD3 4168.1.1 206-260 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990863 Q87QG4_nD4 192.1.1 356-430 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002990864 Q87QG4_nD2 601.1.1 46-175 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002990865 Q87QG4_nD5 UNASSIGNED 261-340,456-530 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002990866 Q87QG4_nD1 5043.2.1 6-45,176-205 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002990867 Q87QG4_nD6 1042.1.1 341-355,431-455 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'a+b complex topology' 002990868 Q87Q32_nD1 1075.5.1 6-215 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990869 Q87Q32_nD2 1075.5.1 231-495 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002990870 Q87GT1_nD2 304.4.1 61-145 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002990871 Q87GT1_nD1 101.1.2 1-55 'winged' 'HTH' 'HTH' 'alpha arrays' 002990872 Q87FM3_nD2 5084.5.3 51-90,126-710 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990873 Q87FM3_nD1 3070.2.1 91-125 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002990874 Q87KJ1_nD1 241.2.1 1-104 'Frataxin-like' 'Frataxin-like' 'Type III secretory system chaperone-like' 'a+b two layers' 002990875 Q87T43_nD1 7512.1.1 1-210 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990876 Q87T43_nD2 7512.1.1 211-380 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002990877 Q87SM7_nD5 101.1.1 711-814 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990878 Q87SM7_nD2 2004.1.1 161-355 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990879 Q87SM7_nD1 2008.1.1 11-160 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002990880 Q87SM7_nD4 2004.1.1 656-725 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990881 Q87SM7_nD3 2004.1.1 356-575,626-655 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990882 Q87GM8_nD2 327.7.1 236-304 'Cation efflux protein cytoplasmic domain-like' 'Cation efflux protein cytoplasmic domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990883 Q87GM8_nD1 5082.1.1 11-145,171-235 'Cation efflux protein transmembrane domain-like' 'Cation efflux protein transmembrane domain-like' 'Cation efflux protein transmembrane domain-like' 'alpha bundles' 002990884 Q87FE6_nD3 1.1.7 51-70,351-455 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002990885 Q87FE6_nD2 5086.1.1 106-315 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002990886 Q87FE6_nD1 325.1.7 71-105,316-350 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990887 Q87KP3_nD1 300.1.1 16-220 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002990888 Q87KP3_nD2 300.1.1 231-445 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002990889 Q87LN8_nD2 4.11.1 81-299 'LexA/Signal peptidase' 'LexA/Signal peptidase' 'SH3' 'beta barrels' 002990890 Q87LN8_nD1 5086.1.1 6-80 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002990891 Q87JY2_nD1 3355.1.1 6-450 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002990892 Q87GY3_nD1 223.1.1 16-140 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002990893 Q87GY3_nD2 4177.1.1 146-180 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002990894 Q87GY3_nD5 3834.1.1 251-300,456-510 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002990895 Q87GY3_nD3 4168.1.1 181-245 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002990896 Q87GY3_nD4 3755.3.1 301-455 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002990897 Q87K63_nD1 3236.2.1 6-405 'Sodium-dependent citrate symporter' 'Sodium-dependent citrate symporter' 'Cation-proton antiporter' 'alpha complex topology' 002990898 Q87QI1_nD1 2004.1.1 1-325 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990899 Q87N32_nD1 5051.1.1 1-485 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002990900 Q87QH7_nD2 148.1.3 1-10,176-260 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002990901 Q87QH7_nD1 2004.1.1 11-175 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990902 Q87QH7_nD3 101.1.1 276-330 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002990903 Q87LM9_nD1 516.1.1 1-85 'YgfY-like (DUP399, Pfam03937)' 'YgfY-like (DUP399, Pfam03937)' 'YgfY-like (DUP399, Pfam03937)' 'alpha arrays' 002990904 Q87LH3_nD1 2003.1.1 1-220 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990905 Q87NS0_nD2 211.1.1 56-115 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002990906 Q87NS0_nD1 211.1.1 6-55 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002990907 Q87FS1_nD3 7523.1.1 166-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990908 Q87FS1_nD2 7523.1.1 86-165,266-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990909 Q87FS1_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002990910 Q87S69_nD2 7523.1.1 96-190,281-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990911 Q87S69_nD1 164.1.1 11-95 'Chorismate mutase II' 'Chorismate mutase II' 'Chorismate mutase II' 'alpha bundles' 002990912 Q87S69_nD3 7523.1.1 191-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990913 Q87S69_nD4 304.8.1 296-390 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002990914 Q87MQ5_nD1 5048.1.1 1-225 'Aquaporin-like' 'Aquaporin-like' 'Aquaporin-like' 'alpha complex topology' 002990915 Q87G82_nD2 5084.5.3 36-45,161-695 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990916 Q87G82_nD1 3070.2.1 46-160 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002990917 Q87R90_nD4 10.1.2 461-620 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002990918 Q87R90_nD3 5090.2.1 316-460 'Immune inhibitor A metallopeptidase C-terminal domain' 'Immune inhibitor A metallopeptidase C-terminal domain' 'Viral glycoprotein, central and dimerisation domains-like' 'beta complex topology' 002990919 Q87R90_nD7 11.1.1 811-900 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990920 Q87R90_nD5 11.1.1 626-715 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990921 Q87R90_nD2 2498.1.1 81-315 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002990922 Q87R90_nD1 10.1.2 1-30 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002990923 Q87R90_nD6 11.1.1 716-810 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002990924 Q87H67_nD1 4252.1.1 56-215 'AttH-like' 'AttH-like' 'AttH-like' 'beta barrels' 002990925 Q87H67_nD2 4252.1.1 16-55,216-340 'AttH-like' 'AttH-like' 'AttH-like' 'beta barrels' 002990926 Q87JD5_nD1 5084.5.1 21-258 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990927 Q87Q81_nD1 866.1.1 6-179 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002990928 Q87GA7_nD1 2004.1.1 1-270 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990929 Q87IV3_nD1 3931.1.1 6-40,61-170 'MtlR-like' 'MtlR-like' 'MtlR-like' 'alpha bundles' 002990930 Q87LK6_nD2 327.17.1 126-235 'S-adenosylmethionine synthetase' 'S-adenosylmethionine synthetase' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990931 Q87LK6_nD1 327.17.1 11-120 'S-adenosylmethionine synthetase' 'S-adenosylmethionine synthetase' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990932 Q87LK6_nD3 327.17.1 241-380 'S-adenosylmethionine synthetase' 'S-adenosylmethionine synthetase' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990933 Q87HZ7_nD6 304.28.2 706-795 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002990934 Q87HZ7_nD8 5067.1.1 501-550,861-1015 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002990935 Q87HZ7_nD5 304.28.1 551-660 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002990936 Q87HZ7_nD2 304.28.2 181-265 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002990937 Q87HZ7_nD7 304.28.1 661-705,796-860 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002990938 Q87HZ7_nD1 304.28.1 41-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002990939 Q87HZ7_nD4 5067.1.1 1-40,326-500 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002990940 Q87HZ7_nD3 304.28.1 136-180,271-325 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002990941 Q87RG8_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002990942 Q87RG8_nD2 2484.1.1 81-205,381-395 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990943 Q87RG8_nD3 2484.1.1 206-380 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990944 Q87SQ8_nD2 301.13.1 181-245,266-350 'DAK1/DegV C-terminal domain' 'DAK1/DegV C-terminal domain' 'Bacillus chorismate mutase-like' 'a+b three layers' 002990945 Q87SQ8_nD1 2010.1.1 6-180 'EDD domain' 'EDD domain' 'EDD domain' 'a/b three-layered sandwiches' 002990946 Q87FK5_nD2 2484.1.1 291-565 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990947 Q87FK5_nD1 2484.1.1 11-290 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002990948 Q87PV2_nD2 7581.1.1 201-314 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002990949 Q87PV2_nD1 7581.1.1 6-200 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002990950 Q87Q15_nD1 2002.1.1 1-300 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990951 Q87T03_nD1 3174.1.1 1-123 'Ribosomal protein L14-related' 'Ribosomal protein L14-related' 'Ribosomal protein L14-like' 'beta barrels' 002990952 Q87FW2_nD1 2003.1.1 1-250,276-360 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990953 Q87I40_nD2 2002.1.1 101-513 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990954 Q87I40_nD1 3087.1.3 1-85 'Type 5 and 6' 'CDGSH iron-sulfur domains' 'CDGSH iron-sulfur domains' 'few secondary structure elements' 002990955 Q87TH2_nD3 150.1.1 481-544 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002990956 Q87TH2_nD2 206.1.1 6-15,51-460 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990957 Q87TH2_nD1 206.1.1 16-50 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002990958 Q87HX8_nD1 5001.1.1 16-218 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002990959 Q87Q74_nD1 65.1.1 1-70 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'beta sandwiches' 002990960 Q87Q74_nD2 2002.1.1 71-415 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990961 Q87JL5_nD1 7577.1.1 6-385 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002990962 Q87JL5_nD2 3016.1.1 371-455 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002990963 Q87GT5_nD2 2003.1.1 126-290,451-470 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002990964 Q87GT5_nD1 2007.1.6 6-120 'Aminoacid dehydrogenase-like, N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990965 Q87GT5_nD3 298.1.1 291-320,341-450 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002990966 Q87GV9_nD1 1079.1.1 1-205 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002990967 Q87GK8_nD2 2007.1.14 191-315 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990968 Q87GK8_nD1 2007.1.14 36-190 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990969 Q87N19_nD1 7510.1.1 1-125,296-335 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002990970 Q87N19_nD2 7510.1.1 126-295 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002990971 Q87R61_nD2 5050.1.1 216-435 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990972 Q87R61_nD1 5050.1.1 6-215 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002990973 Q87R61_nD3 7558.1.1 436-624 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002990974 Q87QX9_nD1 328.6.1 21-240 'EPT/RTPC-like' 'EPT/RTPC-like' 'IF3-like' 'a+b two layers' 002990975 Q87QX9_nD2 328.6.1 1-20,241-425 'EPT/RTPC-like' 'EPT/RTPC-like' 'IF3-like' 'a+b two layers' 002990976 Q87RX8_nD2 2004.1.1 1-185,336-554 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990977 Q87RX8_nD1 192.2.1 186-335 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002990978 Q87RG7_nD1 65.1.1 1-55,346-378 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'beta sandwiches' 002990979 Q87RG7_nD2 2002.1.1 56-345 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002990980 Q87G71_nD2 101.1.3 151-218 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002990981 Q87G71_nD1 2007.1.3 11-150 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002990982 Q87P67_nD1 7523.1.1 26-120,251-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990983 Q87P67_nD2 7523.1.1 121-250 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002990984 Q87M33_nD1 7584.1.1 11-180 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002990985 Q87M33_nD2 323.1.1 181-290,311-440 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002990986 Q87M33_nD3 327.5.1 441-565 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002990987 Q87K65_nD1 2004.1.1 1-220,271-280 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002990988 Q87K65_nD2 304.163.1 221-270 'ATP-binding protein TM_1403 insertion domain' 'ATP-binding protein TM_1403 insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002990989 Q87PV0_nD2 109.51.1 241-395 'TssA helical domains' 'TssA helical domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002990990 Q87PV0_nD1 109.51.1 6-180 'TssA helical domains' 'TssA helical domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002990991 Q87PV0_nD3 109.51.1 411-524 'TssA helical domains' 'TssA helical domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002990992 Q87M23_nD3 325.1.3 336-435 'Pyrimidine nucleoside phosphorylase C-terminal domain' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002990993 Q87M23_nD2 7544.1.1 71-335 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'a/b three-layered sandwiches' 002990994 Q87M23_nD1 184.1.1 1-70 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'alpha arrays' 002990995 Q87R05_nD1 5084.9.1 21-328 'Lipid A deacylase LpxR' 'Lipid A deacylase LpxR' 'Outer membrane meander beta-barrels' 'beta barrels' 002990996 Q87NV8_nD1 868.1.1 6-180 'mRNA triphosphatase CET1-related' 'mRNA triphosphatase CET1-related' 'mRNA triphosphatase CET1-related' 'a+b complex topology' 002990997 Q87JM6_nD1 5084.5.4 31-85,131-215,246-453 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002990998 Q87T94_nD3 601.19.1 146-195,216-288 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002990999 Q87T94_nD2 2005.1.1 81-120 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002991000 Q87T94_nD1 212.1.1 6-70,126-145 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002991001 Q87NE5_nD2 5019.1.1 106-130 'Subunit III of photosystem I reaction centre, PsaF' 'Subunit III of photosystem I reaction centre, PsaF' 'Subunit III of photosystem I reaction centre, PsaF' 'extended segments' 002991002 Q87NE5_nD1 4009.1.1 31-105 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha bundles' 002991003 Q87T87_nD3 4168.1.1 221-280 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991004 Q87T87_nD4 3834.1.1 386-450 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002991005 Q87T87_nD1 3757.1.1 6-35,201-220 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002991006 Q87T87_nD2 3488.1.1 36-185 'Putative sensor histidine kinase domain' 'Putative sensor histidine kinase domain' 'Putative sensor histidine kinase domain' 'a+b three layers' 002991007 Q87T87_nD5 3755.3.1 281-385,451-555 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002991008 Q87SM1_nD1 320.4.1 1-260,501-529 'PUB domain' 'PUB domain' 'R3H domain-like' 'a+b two layers' 002991009 Q87SM1_nD2 2008.1.1 261-500 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002991010 Q87JL7_nD3 2007.1.2 171-300,331-340 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991011 Q87JL7_nD2 2007.1.2 61-170,301-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991012 Q87JL7_nD1 101.1.4 1-60 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002991013 Q87P49_nD1 3755.1.1 6-153 'Putative type III secretion protein YscO-related' 'Putative type III secretion protein YscO-related' 'YscO-like' 'alpha bundles' 002991014 Q87QF9_nD4 101.1.1 451-509 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991015 Q87QF9_nD3 148.1.3 366-450 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002991016 Q87QF9_nD2 2004.1.1 191-365 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991017 Q87QF9_nD1 223.1.1 6-170 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991018 Q87M10_nD1 2002.1.1 6-295 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991019 Q87PH1_nD1 235.1.1 68-275 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002991020 Q87HA8_nD1 1075.3.1 6-60,91-305 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991021 Q87N20_nD1 7581.1.1 1-175 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002991022 Q87N20_nD2 7581.1.1 176-315 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002991023 Q87NI9_nD1 5051.1.1 12-415 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002991024 Q87H20_nD1 6028.1.1 26-90 'Ribosome modulation factor' 'Ribosome modulation factor' 'Ribosome modulation factor' 'alpha bundles' 002991025 Q87H20_nD2 5064.1.1 91-120 'Photosystem I reaction center subunit XI, PsaL' 'Photosystem I reaction center subunit XI, PsaL' 'Photosystem I reaction center subunit XI, PsaL' 'alpha bundles' 002991026 Q87PR5_nD1 102.1.2 16-235 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991027 Q87QU0_nD3 3834.1.1 161-205 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002991028 Q87QU0_nD4 272.1.1 251-355 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'a+b two layers' 002991029 Q87QU0_nD1 3967.1.1 101-155 'Mitoribosomal protein mS26' 'Mitoribosomal protein mS26' 'Mitoribosomal protein mS26' 'extended segments' 002991030 Q87QU0_nD2 5086.1.1 51-100,206-250 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991031 Q87MM2_nD1 7581.1.1 6-435 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002991032 Q87J94_nD2 213.1.1 96-255 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991033 Q87J94_nD1 101.1.4 1-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002991034 Q87NL5_nD2 601.7.1 131-265 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002991035 Q87NL5_nD1 109.3.1 6-120 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991036 Q87G80_nD2 2007.1.14 171-305 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991037 Q87G80_nD1 2007.1.14 31-170 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991038 Q87PS3_nD1 192.19.1 6-30 'YnzC-like' 'YnzC-like' 'Long alpha-hairpin' 'alpha bundles' 002991039 Q87SN3_nD1 375.1.1 1-35 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002991040 Q87SN3_nD2 103.9.1 66-130 'RanGAP2 N-terminal domain' 'RanGAP2 N-terminal domain' 'RuvA-C' 'alpha arrays' 002991041 Q87I95_nD1 7577.1.1 1-320 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991042 Q87I95_nD2 3016.1.1 321-393 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991043 Q87FD1_nD1 208.1.1 1-215 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002991044 Q87GX6_nD3 3755.3.1 131-190 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002991045 Q87GX6_nD4 4168.1.1 251-310 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991046 Q87GX6_nD2 5043.2.1 1-25,216-250 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002991047 Q87GX6_nD5 5086.1.1 361-530 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991048 Q87GX6_nD6 UNASSIGNED 311-360,531-585 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002991049 Q87GX6_nD1 601.4.1 26-130,191-215 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991050 Q87NS6_nD1 3012.1.1 16-135 'Cof C2 cap domain' 'Cof C2 cap domain' 'Cof C2 cap domain' 'a+b two layers' 002991051 Q87FR7_nD2 304.25.1 176-290 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002991052 Q87FR7_nD1 2011.1.1 1-175,291-374 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002991053 Q87KE9_nD1 1002.1.1 6-125 'Fluoride ion channel' 'Fluoride ion channel' 'Fluoride ion channel' 'alpha complex topology' 002991054 Q87L53_nD1 101.1.2 1-175 'winged' 'HTH' 'HTH' 'alpha arrays' 002991055 Q87HL8_nD1 129.1.1 6-65 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002991056 Q87HL8_nD2 109.4.1 86-140 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991057 Q87TA9_nD1 2004.1.1 1-205 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991058 Q87PG3_nD2 304.3.1 71-160 'HMA, heavy metal-associated domain' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002991059 Q87PG3_nD5 267.1.1 511-615 'Metal cation-transporting ATPase, ATP-binding domain' 'Metal cation-transporting ATPase, ATP-binding domain' 'Metal cation-transporting ATPase, ATP-binding domain' 'a+b complex topology' 002991060 Q87PG3_nD1 386.1.1 1-55 'beta-beta-alpha zinc fingers' 'beta-beta-alpha zinc fingers' 'beta-beta-alpha zinc fingers' 'few secondary structure elements' 002991061 Q87PG3_nD6 2006.1.1 481-510,616-720 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991062 Q87PG3_nD3 10.13.1 301-405 'Calcium ATPase, transduction domain A' 'Calcium ATPase, transduction domain A' 'jelly-roll' 'beta sandwiches' 002991063 Q87PG3_nD4 5073.1.2 166-300,411-480,721-785 'Copper efflux ATPase transmembrane domain' 'Calcium ATPase transmembrane domain-related' 'Calcium ATPase transmembrane domain-related' 'alpha bundles' 002991064 Q87TP0_nD2 7581.1.1 266-390 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002991065 Q87TP0_nD1 7581.1.1 6-265 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002991066 Q87QG2_nD1 2003.1.5 1-310 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991067 Q87LR2_nD3 101.35.1 106-150 'DNA repair regulatory protein RecX' 'DNA repair regulatory protein RecX' 'HTH' 'alpha arrays' 002991068 Q87LR2_nD1 101.35.1 11-60 'DNA repair regulatory protein RecX' 'DNA repair regulatory protein RecX' 'HTH' 'alpha arrays' 002991069 Q87LR2_nD2 101.35.1 61-105 'DNA repair regulatory protein RecX' 'DNA repair regulatory protein RecX' 'HTH' 'alpha arrays' 002991070 Q87MY0_nD1 2002.1.1 11-330 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991071 Q87HZ3_nD1 311.1.1 1-145 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002991072 Q87HZ3_nD2 311.1.1 146-275 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002991073 Q87HZ3_nD3 322.1.1 286-375 'HPr-like' 'HPr-like' 'HPr-like' 'a+b two layers' 002991074 Q87FS6_nD4 6017.1.1 341-370 'Transmembrane helix of outer membrane lipoprotein Wza' 'Transmembrane helix of outer membrane lipoprotein Wza' 'Transmembrane helix of outer membrane lipoprotein Wza' 'extended segments' 002991075 Q87FS6_nD3 221.1.4 46-65,251-340 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991076 Q87FS6_nD2 221.1.4 66-85,166-250 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991077 Q87FS6_nD1 6016.1.1 86-165 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'a+b two layers' 002991078 Q87MZ4_nD1 2484.1.1 1-195 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991079 Q87MZ4_nD2 2484.1.1 196-395 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991080 Q87L85_nD1 2002.1.1 6-320 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991081 Q87G14_nD1 11.1.5 21-190 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991082 Q87G14_nD2 11.1.5 191-320 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991083 Q87P51_nD1 532.2.1 76-170 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002991084 Q87P51_nD2 532.2.1 176-280 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002991085 Q87NP3_nD2 282.1.1 111-255 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002991086 Q87NP3_nD1 601.7.1 21-110 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002991087 Q87SG5_nD1 7011.1.1 16-395 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002991088 Q79YT8_nD1 2006.1.4 6-160 'PIN domain-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991089 Q87H91_nD1 331.3.1 1-155 'Bet v1-like' 'Bet v1-like' 'TBP-like' 'a+b two layers' 002991090 Q87H91_nD2 886.1.1 156-310 'Probable bacterial effector-binding domain' 'Probable bacterial effector-binding domain' 'Probable bacterial effector-binding domain' 'a+b duplicates or obligate multimers' 002991091 Q79YY1_nD1 2.1.1 1-115 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991092 Q87P82_nD1 358.3.1 6-115 'Putative uncharacterized protein TTHA0547' 'Putative uncharacterized protein TTHA0547' 'SRCR-like' 'a+b complex topology' 002991093 Q87J17_nD2 101.1.1 151-214 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991094 Q87J17_nD1 7565.1.1 11-150 'Resolvase-like' 'Resolvase-like' 'Resolvase-like' 'a/b three-layered sandwiches' 002991095 Q87IB9_nD1 107.1.1 31-55 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002991096 Q87IB9_nD2 601.7.1 56-170 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002991097 Q87HT4_nD1 2004.1.1 6-230 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991098 Q87TK8_nD1 5059.1.1 6-109 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002991099 Q87FS8_nD1 5050.1.1 6-213 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991100 Q87GW2_nD1 150.5.1 6-105 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002991101 Q87GA5_nD2 1075.5.1 231-430 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991102 Q87GA5_nD1 1075.5.1 1-225 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991103 Q87Q92_nD2 2003.1.1 266-555 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991104 Q87Q92_nD1 2007.1.6 6-265 'Aminoacid dehydrogenase-like, N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991105 Q87IE0_nD1 6155.1.1 6-75 'SWEET transporter' 'SWEET transporter' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002991106 Q87NH8_nD5 2.1.1 661-740 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991107 Q87NH8_nD2 2.1.1 81-150 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991108 Q87NH8_nD1 101.1.2 21-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002991109 Q87NH8_nD4 2.9.1 236-660 'RNB domain-like' 'RNB domain-like' 'OB-fold' 'beta barrels' 002991110 Q87NH8_nD3 2.1.1 151-235 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991111 Q87L88_nD1 5084.2.1 26-219 'OMPT-like' 'OMPT-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002991112 Q87HD2_nD1 2499.2.1 66-380 'Domain III of tail sheath protein Gp18' 'Domain III of tail sheath protein Gp18' 'Subtilisin-like' 'a/b three-layered sandwiches' 002991113 Q87HD2_nD2 283.2.1 381-505 'gpW/gp25-like' 'gpW/gp25-like' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002991114 Q87ML6_nD3 11.1.1 291-405 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991115 Q87ML6_nD1 109.4.1 31-75 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991116 Q87ML6_nD2 109.4.1 1-25,91-285 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991117 Q87LD5_nD2 3684.1.1 101-175 'PSPTO4464 C-terminal domain-like' 'PSPTO4464 C-terminal domain-like' 'PSPTO4464 C-terminal domain-like' 'alpha complex topology' 002991118 Q87LD5_nD1 4338.1.1 26-100 'PSPTO4464 N-terminal domain-like' 'PSPTO4464 N-terminal domain-like' 'PSPTO4464 N-terminal domain-like' 'alpha complex topology' 002991119 Q87I35_nD1 5050.1.1 1-375 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991120 Q87I35_nD2 2007.5.1 381-615 'SGNH hydrolase' 'SGNH hydrolase' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991121 Q87MW9_nD1 3921.1.1 6-215 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'alpha complex topology' 002991122 Q87LN9_nD2 330.1.1 151-225 'dsRNA-binding domain-like' 'dsRNA-binding domain-like' 'dsRBD-like' 'a+b two layers' 002991123 Q87LN9_nD1 171.1.1 6-150 'RNase III catalytic domain-like' 'RNase III catalytic domain-like' 'RNase III catalytic domain-like' 'alpha arrays' 002991124 Q87HG6_nD1 2002.1.1 16-440 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991125 Q87HG6_nD2 12.1.1 431-505 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002991126 Q87IF1_nD3 101.1.2 286-340 'winged' 'HTH' 'HTH' 'alpha arrays' 002991127 Q87IF1_nD2 3711.1.1 116-180 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'alpha bundles' 002991128 Q87IF1_nD1 310.3.1 16-115,186-240 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002991129 Q87R35_nD4 4168.1.1 336-385 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991130 Q87R35_nD3 601.4.1 141-260 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991131 Q87R35_nD5 1042.1.1 491-560 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'S2 subunit of coronavirus spike glycoprotein' 'a+b complex topology' 002991132 Q87R35_nD2 601.4.1 46-140,261-305 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991133 Q87R35_nD1 3479.1.1 6-45,306-335 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002991134 Q87R35_nD6 3755.3.1 386-470,561-663 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002991135 Q87ME7_nD1 2493.1.1 1-90 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'a/b three-layered sandwiches' 002991136 Q87ME7_nD2 208.1.1 96-343 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002991137 Q87QP4_nD3 2004.1.1 496-525 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991138 Q87QP4_nD4 304.156.1 536-635 'DNA translocase FtsK N-terminal domain' 'DNA translocase FtsK N-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002991139 Q87QP4_nD2 5069.1.1 116-190 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002991140 Q87QP4_nD5 2004.1.1 641-945 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991141 Q87QP4_nD6 101.1.2 966-1025 'winged' 'HTH' 'HTH' 'alpha arrays' 002991142 Q87QP4_nD1 3928.1.1 21-110 'Cell division protein CrgA' 'Cell division protein CrgA' 'Cell division protein CrgA' 'alpha bundles' 002991143 Q87RR7_nD1 306.1.1 6-90 'Glucose permease domain IIB' 'Glucose permease domain IIB' 'Glucose permease domain IIB-like' 'a+b two layers' 002991144 Q87RR7_nD2 3227.1.1 96-465 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002991145 Q87IP5_nD1 5084.5.1 36-405 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991146 Q87PK7_nD1 3115.1.1 6-75 'RplX-like' 'RplX-like' 'GP2-like' 'a+b two layers' 002991147 Q87IS1_nD2 7528.1.1 206-320 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002991148 Q87IS1_nD1 7528.1.1 1-205 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002991149 Q87IS1_nD3 7528.1.1 321-440 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002991150 Q87IS1_nD4 331.2.1 441-560 'Phosphoglucomutase, C-terminal domain' 'Phosphoglucomutase, C-terminal domain' 'TBP-like' 'a+b two layers' 002991151 Q87I14_nD1 1075.4.1 6-325 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991152 Q87I14_nD2 2004.1.1 326-580 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991153 Q87PZ0_nD1 1037.1.1 16-65 'Prolipoprotein diacylglyceryl transferase' 'Prolipoprotein diacylglyceryl transferase' 'Prolipoprotein diacylglyceryl transferase' 'alpha bundles' 002991154 Q87PK0_nD4 101.1.1 421-475 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991155 Q87PK0_nD3 148.1.3 326-405 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002991156 Q87PK0_nD1 2007.1.3 11-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991157 Q87PK0_nD2 2004.1.1 151-325 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991158 Q87M56_nD1 101.1.4 1-50 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002991159 Q87M56_nD2 2007.1.2 51-155,291-315 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991160 Q87M56_nD3 2007.1.2 156-290,316-328 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991161 Q87JF6_nD1 3227.1.1 16-350 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002991162 Q87JF6_nD2 2007.2.2 371-465 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991163 Q87LG9_nD1 1075.1.1 1-135,246-360 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991164 Q87LG9_nD2 3523.1.1 141-245 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'beta meanders' 002991165 Q87MY4_nD1 325.1.2 1-150 'Molybdopterin synthase subunit MoaE' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991166 Q87N84_nD1 2002.1.1 1-340 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991167 Q87PD5_nD1 375.1.1 11-75 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002991168 Q87NA4_nD1 222.1.1 6-130 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002991169 Q87IL9_nD1 2011.4.1 1-205 'Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)' 'Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002991170 Q9L7P5_nD1 593.1.1 6-135,411-520 'GroEL equatorial domain-like' 'GroEL equatorial domain-like' 'GroEL equatorial domain-like' 'alpha bundles' 002991171 Q9L7P5_nD2 2498.5.1 136-190,376-410 'GroEL-intermediate domain like' 'GroEL-intermediate domain like' 'Zincin-like' 'mixed a+b and a/b' 002991172 Q9L7P5_nD3 2487.1.1 191-375 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002991173 Q87H79_nD2 2004.1.1 246-500 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991174 Q87H79_nD1 2004.1.1 1-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991175 Q87RH5_nD4 2498.4.1 496-630 'HSP90 C-terminal domain (C-terminal part of Pfam 00183)' 'HSP90 C-terminal domain (C-terminal part of Pfam 00183)' 'Zincin-like' 'mixed a+b and a/b' 002991176 Q87RH5_nD3 3703.1.1 376-495 'HSP90 C-terminal a/b domain' 'HSP90 C-terminal a/b domain' 'HSP90 C-terminal a/b domain' 'a/b three-layered sandwiches' 002991177 Q87RH5_nD2 212.1.1 241-375 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002991178 Q87RH5_nD1 225.1.1 11-235 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991179 Q87RF7_nD1 2008.1.1 1-250 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002991180 Q87S43_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002991181 Q87S43_nD2 7523.1.1 86-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991182 Q87H03_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991183 Q87H03_nD2 866.1.1 136-334 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002991184 Q87RL8_nD1 5084.5.1 17-373 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991185 Q87GF1_nD1 109.4.1 1-155 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991186 Q87LB4_nD2 274.1.1 31-165 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002991187 Q87LB4_nD1 274.1.1 6-30 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002991188 Q87L22_nD2 7524.1.1 246-450 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002991189 Q87L22_nD1 7524.1.1 1-245,451-465 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002991190 Q87SY9_nD1 218.3.1 6-115 'Prokaryotic ribosomal protein L17' 'Prokaryotic ribosomal protein L17' 'Enolase-N/ribosomal protein' 'a+b two layers' 002991191 Q87I68_nD2 101.1.3 131-198 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002991192 Q87I68_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991193 Q87Q51_nD1 3236.2.1 1-220 'Sodium-dependent citrate symporter' 'Sodium-dependent citrate symporter' 'Cation-proton antiporter' 'alpha complex topology' 002991194 Q87MW2_nD1 109.4.1 71-115 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991195 Q87MU4_nD4 604.12.1 426-480 'MIT domain' 'MIT domain' 'Spectrin repeat-like' 'alpha bundles' 002991196 Q87MU4_nD3 632.22.1 341-425 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002991197 Q87MU4_nD1 102.1.1 86-170 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991198 Q87MU4_nD2 304.55.1 6-85,171-340 'Origin of replication-binding domains' 'Origin of replication-binding domains' 'Alpha-beta plaits' 'a+b two layers' 002991199 Q87RL2_nD1 223.2.1 36-105 'profilin-like' 'profilin-like' 'Profilin-like' 'a+b three layers' 002991200 Q87RL2_nD2 252.2.1 106-185 'GCC-box binding domain-like' 'GCC-box binding domain-like' 'DNA-binding domain' 'a+b two layers' 002991201 Q87M63_nD1 2002.1.1 1-355 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991202 Q87PN0_nD1 601.3.1 1-110 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002991203 Q87LS6_nD2 5069.1.1 121-264 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002991204 Q87LS6_nD1 601.1.1 1-120 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002991205 Q87G37_nD1 193.1.1 1-25 'Calponin-homology domain-like' 'Calponin-homology domain-like' 'CH domain-like' 'alpha bundles' 002991206 Q87G37_nD2 5086.1.1 96-215 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991207 Q87G37_nD3 325.1.7 61-95,216-255 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991208 Q87G37_nD4 1.1.7 26-60,256-300,321-375 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991209 Q56703_nD1 601.51.1 6-170,271-375 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002991210 Q56703_nD2 3019.1.1 171-270 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002991211 Q87PZ4_nD1 5084.5.1 61-393 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991212 Q87S49_nD3 605.1.1 181-240 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991213 Q87S49_nD4 1075.3.1 1-40,286-555 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991214 Q87S49_nD2 4.1.1 131-180,241-285 'SH3' 'SH3' 'SH3' 'beta barrels' 002991215 Q87S49_nD1 4.1.1 46-130 'SH3' 'SH3' 'SH3' 'beta barrels' 002991216 Q87IU6_nD1 3156.2.1 106-145 'Czce' 'Czce' 'Cupredoxin-like' 'beta sandwiches' 002991217 P66533_nD1 3666.1.1 1-65 '30S ribosomal protein S21' '30S ribosomal protein S21' '30S ribosomal protein S21' 'extended segments' 002991218 Q87SN6_nD3 101.1.4 141-240 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002991219 Q87SN6_nD2 2008.1.1 56-95 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002991220 Q87SN6_nD1 108.1.1 6-55 'EF-hand' 'EF-hand-related' 'EF-hand' 'alpha arrays' 002991221 Q87LE9_nD1 1075.5.1 6-30 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991222 Q87LE9_nD2 1075.1.1 36-260 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991223 Q87R59_nD1 243.1.1 166-290 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002991224 Q87JI3_nD1 4.1.1 66-80,131-200 'SH3' 'SH3' 'SH3' 'beta barrels' 002991225 Q87T78_nD1 7516.1.1 1-260 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002991226 Q87JS8_nD1 2002.1.1 71-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991227 Q87JS8_nD2 604.34.1 366-465 'Helical bundle domain in arginine decarboxylase' 'Helical bundle domain in arginine decarboxylase' 'Spectrin repeat-like' 'alpha bundles' 002991228 Q87JS8_nD3 1.1.7 11-70,351-365,466-640 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991229 Q87FH9_nD1 2002.1.1 1-395 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991230 Q87PB7_nD1 2002.1.1 1-335 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991231 Q87JU2_nD1 109.4.1 26-390 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991232 Q87NZ2_nD1 2004.1.1 1-265 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991233 Q87NZ2_nD2 282.1.1 266-395 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002991234 Q87R07_nD1 604.39.1 1-220 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002991235 Q87LQ9_nD1 242.3.1 1-115 'DNA repair protein MutS, domain I' 'DNA repair protein MutS, domain I' 'Homing endonucleases-like' 'a+b two layers' 002991236 Q87LQ9_nD2 2484.1.1 116-265 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991237 Q87LQ9_nD4 2004.1.1 566-853 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991238 Q87LQ9_nD3 601.23.1 271-565 'DNA repair protein MutS, domain III' 'DNA repair protein MutS, domain III' 'Four-helical up-and-down bundle' 'alpha bundles' 002991239 Q87JQ2_nD1 109.2.1 31-355 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002991240 Q87S71_nD1 101.1.6 6-103 'TrpR' 'HTH' 'HTH' 'alpha arrays' 002991241 Q87M95_nD2 129.1.1 171-295 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002991242 Q87M95_nD1 2003.1.1 1-170 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991243 Q87I10_nD1 7577.1.1 16-290 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991244 Q87I10_nD2 3016.1.1 6-15,276-355 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991245 Q87G48_nD1 192.8.1 26-80 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002991246 Q87IN4_nD1 5082.1.1 6-215 'Cation efflux protein transmembrane domain-like' 'Cation efflux protein transmembrane domain-like' 'Cation efflux protein transmembrane domain-like' 'alpha bundles' 002991247 Q87IN4_nD2 327.7.1 216-298 'Cation efflux protein cytoplasmic domain-like' 'Cation efflux protein cytoplasmic domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002991248 Q87NN7_nD1 159.1.2 1-94 'MazG-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002991249 Q87FT1_nD2 2007.2.5 96-290 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991250 Q87FT1_nD1 304.110.1 6-95 'Acylphosphatase-like' 'Acylphosphatase-like' 'Alpha-beta plaits' 'a+b two layers' 002991251 Q87TH0_nD2 6051.4.1 56-95 'Class 2 N-terminal docking domain' 'Class 2 N-terminal docking domain' 'Docking domains in modular polyketide synthases' 'alpha duplicates or obligate multimers' 002991252 Q87TH0_nD1 3473.1.1 1-55 'Twin-arginine transport (Tat) system component TatA' 'Twin-arginine transport (Tat) system component TatA' 'Twin-arginine transport (Tat) system component TatA' 'extended segments' 002991253 Q87TR5_nD2 3877.1.1 331-540 'Membrane protein insertase YidC' 'Membrane protein insertase YidC-related' 'Membrane protein insertase YidC-related' 'alpha bundles' 002991254 Q87TR5_nD1 12.3.1 61-330 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002991255 Q87PU1_nD1 5084.1.1 26-203 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002991256 Q87IW3_nD1 286.1.1 1-120 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002991257 Q87IW3_nD2 286.1.1 121-263 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002991258 Q87RD1_nD1 2484.1.1 1-110 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991259 Q87RD1_nD2 2484.1.1 111-230 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991260 Q87HQ7_nD1 2004.1.1 26-70 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991261 Q87HQ7_nD2 2004.1.1 71-100,126-365 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991262 Q87TQ0_nD1 7577.1.1 1-415 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991263 Q87M77_nD1 2002.1.1 21-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991264 Q87GS8_nD1 101.1.2 11-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002991265 Q87GS8_nD2 3016.1.1 111-475 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991266 Q87KY7_nD1 5064.1.1 1-120 'Photosystem I reaction center subunit XI, PsaL' 'Photosystem I reaction center subunit XI, PsaL' 'Photosystem I reaction center subunit XI, PsaL' 'alpha bundles' 002991267 Q87NY4_nD1 2007.1.3 1-120 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991268 Q87NY4_nD2 101.1.2 126-218 'winged' 'HTH' 'HTH' 'alpha arrays' 002991269 Q87Q78_nD2 222.1.1 111-235 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002991270 Q87Q78_nD1 222.1.1 1-110 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002991271 Q87PT8_nD2 602.3.1 186-310 'TssK neck domain' 'TssK neck domain' 'L-aspartase middle domain-like' 'alpha arrays' 002991272 Q87PT8_nD1 4166.1.1 1-185 'Lactophage receptor-binding protein N-terminal domain-like' 'Lactophage receptor-binding protein N-terminal domain-like' 'Lactophage receptor-binding protein N-terminal domain-like' 'beta sandwiches' 002991273 Q87PT8_nD3 10.47.1 311-440 'TssK C-terminal domain' 'TssK C-terminal domain' 'jelly-roll' 'beta sandwiches' 002991274 Q87R33_nD3 11.1.4 281-290,326-345,411-460 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991275 Q87R33_nD2 109.4.1 291-325 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991276 Q87R33_nD1 109.4.1 1-180,201-280,346-380 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991277 Q87LW0_nD4 2.1.1 501-580 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991278 Q87LW0_nD3 101.1.2 351-500 'winged' 'HTH' 'HTH' 'alpha arrays' 002991279 Q87LW0_nD6 7045.1.1 616-805 'C-terminal domain of RNA helicase HrpB' 'C-terminal domain of RNA helicase HrpB' 'C-terminal domain of RNA helicase HrpB' 'a+b complex topology' 002991280 Q87LW0_nD1 2004.1.1 1-180 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991281 Q87LW0_nD5 64.5.1 581-615 'Connector region of RNA helicase HrpB' 'Connector region of RNA helicase HrpB' 'WW domain-like' 'beta meanders' 002991282 Q87LW0_nD2 2004.1.1 181-350 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991283 Q87GG3_nD1 243.3.1 31-110 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002991284 Q87GG3_nD2 301.3.1 116-265 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002991285 Q87LU3_nD4 147.1.1 321-370 'Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex' 'Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex' 'Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex' 'alpha arrays' 002991286 Q87LU3_nD3 325.1.7 191-280 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991287 Q87LU3_nD1 325.1.7 1-85 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991288 Q87LU3_nD5 323.1.1 381-625 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002991289 Q87LU3_nD2 325.1.7 91-190 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991290 Q87SW2_nD1 6028.1.1 21-110 'Ribosome modulation factor' 'Ribosome modulation factor' 'Ribosome modulation factor' 'alpha bundles' 002991291 Q87PC4_nD1 6028.1.1 6-50 'Ribosome modulation factor' 'Ribosome modulation factor' 'Ribosome modulation factor' 'alpha bundles' 002991292 Q87NF6_nD1 101.1.2 61-129 'winged' 'HTH' 'HTH' 'alpha arrays' 002991293 Q87GA3_nD1 1.1.9 6-105 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991294 Q87N56_nD1 7503.1.1 26-190 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002991295 Q87IW7_nD1 2004.1.1 1-225,296-308 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991296 Q87IW7_nD2 304.4.1 226-295 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002991297 Q87P45_nD1 5041.1.1 6-80 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002991298 Q87TI5_nD1 601.14.1 1-143 'Hemerythrin' 'Hemerythrin' 'Four-helical up-and-down bundle' 'alpha bundles' 002991299 Q87MS5_nD1 708.1.2 16-145 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002991300 Q87NC7_nD1 2003.1.1 1-415 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991301 Q87T91_nD1 7558.1.1 11-315 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002991302 Q9X9K2_nD1 518.1.1 6-75 'Chemotaxis receptor methyltransferase CheR, N-terminal domain' 'Chemotaxis receptor methyltransferase CheR, N-terminal domain' 'Chemotaxis receptor methyltransferase CheR, N-terminal domain' 'alpha arrays' 002991303 Q9X9K2_nD2 2003.1.5 76-275 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991304 Q87I26_nD1 109.2.1 16-480 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002991305 Q87T58_nD1 7512.1.1 1-160 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991306 Q87T58_nD2 7512.1.1 161-345 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991307 Q87LF7_nD2 375.1.4 101-150 'Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002991308 Q87LF7_nD1 304.38.1 11-100 'Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain' 'Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002991309 Q87I97_nD1 2006.1.1 1-205 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991310 Q87KE6_nD1 208.1.1 1-180 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002991311 Q87LB2_nD4 5060.2.1 246-375 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002991312 Q87LB2_nD3 4177.1.1 176-225,376-405 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002991313 Q87LB2_nD2 5060.2.1 61-175 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002991314 Q87LB2_nD1 3115.1.1 1-45 'RplX-like' 'RplX-like' 'GP2-like' 'a+b two layers' 002991315 Q87PS1_nD1 1076.1.1 6-50 'Hypothetical protein RPA3313' 'Hypothetical protein RPA3313' 'Hypothetical protein RPA3313' 'alpha bundles' 002991316 Q87PS1_nD2 192.2.1 51-170 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002991317 Q87Q24_nD1 3694.1.1 46-145 'Tail specific protease helical domain' 'Tail specific protease helical domain' 'Tail specific protease helical domain' 'alpha bundles' 002991318 Q87Q24_nD2 7.1.1 146-245 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002991319 Q87Q24_nD3 2486.1.1 246-490 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002991320 Q87G07_nD2 3016.1.1 396-468 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991321 Q87G07_nD1 7577.1.1 36-395 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991322 Q87G89_nD1 3156.1.1 26-150 'Cupredoxin-related' 'Cupredoxin-related' 'Cupredoxin-like' 'beta sandwiches' 002991323 Q87ST0_nD1 2487.1.1 1-195 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002991324 Q87T49_nD2 304.58.1 61-290 'FepE-like' 'FepE-like' 'Alpha-beta plaits' 'a+b two layers' 002991325 Q87T49_nD1 3470.1.1 31-60,291-320 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002991326 Q87IZ1_nD1 2007.2.1 11-205 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991327 Q87FM8_nD2 4168.1.1 291-350 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991328 Q87FM8_nD5 3755.4.1 351-375,596-625 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'YscO-like' 'alpha bundles' 002991329 Q87FM8_nD1 223.1.1 6-270 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991330 Q87FM8_nD3 3755.3.1 376-435,536-595 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002991331 Q87FM8_nD4 3291.1.1 451-535 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002991332 Q87PA9_nD1 223.1.1 6-155 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991333 Q87GS1_nD1 2485.1.1 1-35 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002991334 Q87FP5_nD1 1.1.3 1-45 'AbrB' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991335 Q87LN5_nD1 71.1.1 26-220 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002991336 Q87LN5_nD2 881.4.1 221-315 'C-terminal domain in sigma-E factor regulatory protein rseB' 'C-terminal domain in sigma-E factor regulatory protein rseB' 'Mog1p/PsbP-like' 'a+b three layers' 002991337 Q87KD3_nD1 195.1.1 1-130 'NusB-like' 'NusB-like' 'NusB-like' 'alpha complex topology' 002991338 Q87KD3_nD2 2003.1.5 131-425 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991339 Q87TL1_nD4 2007.1.2 201-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991340 Q87TL1_nD3 2007.1.2 91-200,331-360 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991341 Q87TL1_nD2 101.1.4 46-90 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002991342 Q87TL1_nD1 101.1.2 21-45 'winged' 'HTH' 'HTH' 'alpha arrays' 002991343 Q87JS0_nD1 304.8.1 16-110 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002991344 Q87NL3_nD1 3567.1.1 6-175 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002991345 Q87QY1_nD1 213.1.1 6-230 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991346 Q87RD4_nD2 211.1.1 111-199 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002991347 Q87RD4_nD1 211.1.1 1-110 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002991348 Q87M14_nD1 213.1.1 1-165 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991349 Q87JF3_nD2 10.18.1 246-495 'VPA0735-like' 'VPA0735-like' 'jelly-roll' 'beta sandwiches' 002991350 Q87JF3_nD1 10.18.1 36-245 'VPA0735-like' 'VPA0735-like' 'jelly-roll' 'beta sandwiches' 002991351 Q87I79_nD2 304.14.1 276-360 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002991352 Q87I79_nD1 109.4.1 6-230 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991353 Q87T79_nD1 7512.1.1 36-310 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991354 Q87LQ5_nD1 7527.1.1 1-240 'SurE-like/CoA-transferase family III (CaiB/BaiF)' 'SurE-like/CoA-transferase family III (CaiB/BaiF)' 'SurE-like/CoA-transferase family III (CaiB/BaiF)' 'a/b three-layered sandwiches' 002991355 Q87L54_nD1 2002.1.1 11-875 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991356 Q87SU1_nD3 604.39.1 126-260 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002991357 Q87SU1_nD1 283.1.1 6-85 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002991358 Q87SU1_nD2 103.1.1 86-120 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002991359 Q87LL1_nD2 7533.1.1 171-385 'Phosphoglycerate kinase domain 2' 'Phosphoglycerate kinase domain 2' 'Phosphoglycerate kinase domain 2' 'a/b three-layered sandwiches' 002991360 Q87LL1_nD1 7532.1.1 1-170 'Phosphoglycerate kinase domain 1' 'Phosphoglycerate kinase domain 1' 'Phosphoglycerate kinase domain 1' 'a/b three-layered sandwiches' 002991361 Q87SC7_nD1 7090.1.1 1-125 'Glycyl radical domain' 'Glycyl radical domain' 'Glycyl radical domain' 'extended segments' 002991362 Q87N33_nD1 5084.1.1 26-195 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002991363 Q87MC9_nD1 101.1.2 6-55 'winged' 'HTH' 'HTH' 'alpha arrays' 002991364 Q87RH6_nD2 7014.1.1 66-200 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002991365 Q87RH6_nD1 7014.1.1 1-65,201-245 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002991366 Q87QS9_nD2 3843.1.1 36-140 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'alpha complex topology' 002991367 Q87QS9_nD1 4953.1.1 11-35 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002991368 Q87MY3_nD1 221.1.1 1-80 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991369 Q87JN5_nD1 4076.3.1 21-70 'GINS/PriA/YqbF domain' 'GINS/PriA/YqbF domain' 'L9 N-domain-like' 'a+b two layers' 002991370 Q87PX8_nD1 1084.1.1 26-60 'Photosystem II reaction center W protein, chloroplastic' 'Photosystem II reaction center W protein, chloroplastic' 'Photosystem II reaction center W protein, chloroplastic' 'extended segments' 002991371 Q87QU4_nD1 632.11.1 1-100 'AF1782-like' 'AF1782-like' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002991372 Q87NA5_nD2 4177.1.1 71-170 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002991373 Q87NA5_nD1 3937.1.1 1-70 'Connexin 26' 'Connexin 26' 'Connexin 26' 'alpha bundles' 002991374 Q87J57_nD1 872.3.1 26-105 'YbjQ-like' 'YbjQ-like' 'Dodecin subunit-like' 'a+b two layers' 002991375 Q87KN6_nD1 101.1.1 6-80 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991376 Q87KN6_nD2 191.1.1 81-210 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002991377 Q87IY2_nD1 213.1.1 1-175 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991378 Q87T61_nD2 7512.1.1 191-335 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991379 Q87T61_nD1 7512.1.1 1-190 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991380 Q87KA9_nD1 56.1.1 6-85 'Epsilon subunit of F1F0-ATP synthase-N' 'Epsilon subunit of F1F0-ATP synthase-N' 'Epsilon subunit of F1F0-ATP synthase-N' 'beta sandwiches' 002991381 Q87KA9_nD2 192.6.1 91-135 'Epsilon subunit of F1F0-ATP synthase C-terminal domain' 'Epsilon subunit of F1F0-ATP synthase C-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002991382 Q87SJ8_nD1 5085.1.1 21-435 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002991383 Q87SZ3_nD1 5061.1.1 16-435 'Preprotein translocase SecY subunit' 'Preprotein translocase SecY subunit' 'Preprotein translocase SecY subunit' 'alpha complex topology' 002991384 Q87G34_nD1 3646.1.1 11-90,116-275 'T-component of energy-coupling factor (ECF) transporters' 'T-component of energy-coupling factor (ECF) transporters' 'T-component of energy-coupling factor (ECF) transporters' 'alpha complex topology' 002991385 Q87IE5_nD1 101.1.9 1-110 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002991386 Q87T84_nD1 375.1.1 6-55 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002991387 Q87S37_nD1 1.1.12 61-180 'barrel domain in QueA-like proteins' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991388 Q87S37_nD2 4013.1.1 1-60,181-345 'a/b domain in QueA-like proteins (Pfam 02547)' 'a/b domain in QueA-like proteins (Pfam 02547)' 'a/b domain in QueA-like proteins (Pfam 02547)' 'a/b three-layered sandwiches' 002991389 Q87IS7_nD1 3226.1.1 36-103 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002991390 Q87TJ3_nD1 2005.1.1 1-140 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002991391 O82855_nD1 1075.5.1 6-230 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991392 O82855_nD2 1075.5.1 231-455 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991393 Q87IZ6_nD1 198.3.1 1-70 'PAS factor' 'PAS factor' 'Saposin-like' 'alpha arrays' 002991394 Q87MJ3_nD1 304.4.1 1-135 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002991395 Q87MJ3_nD2 304.4.1 136-295 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002991396 Q87MD9_nD3 230.3.1 141-260 'Elongation factor Ts (EF-Ts), dimerisation domain' 'Elongation factor Ts (EF-Ts), dimerisation domain' 'T-fold' 'a+b two layers' 002991397 Q87MD9_nD2 230.3.1 56-135 'Elongation factor Ts (EF-Ts), dimerisation domain' 'Elongation factor Ts (EF-Ts), dimerisation domain' 'T-fold' 'a+b two layers' 002991398 Q87MD9_nD1 103.1.1 6-55 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002991399 Q87G78_nD1 6158.1.1 1-90 'Nucleoporin p58/p45 helical region' 'Nucleoporin p58/p45 helical region' 'Nucleoporin p58/p45 helical region' 'alpha bundles' 002991400 Q87G78_nD2 4.1.1 96-170 'SH3' 'SH3' 'SH3' 'beta barrels' 002991401 Q87G78_nD3 304.39.1 171-285 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002991402 Q87IF3_nD1 139.1.1 96-120 'Cytochrome c3-like' 'Cytochrome c3-like' 'Multiheme cytochromes' 'few secondary structure elements' 002991403 Q87FT9_nD2 7523.1.1 91-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991404 Q87FT9_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002991405 Q87QJ9_nD1 2005.1.1 6-275 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002991406 Q87QJ9_nD2 140.1.1 276-460 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002991407 Q87IZ4_nD1 101.1.2 46-150 'winged' 'HTH' 'HTH' 'alpha arrays' 002991408 Q87LH9_nD1 2002.3.1 1-245 'Glycoside hydrolase/deacetylase' 'Glycoside hydrolase/deacetylase' 'TIM beta/alpha-barrel' 'a/b barrels' 002991409 Q87RH2_nD1 5050.1.1 1-220 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991410 Q87RH2_nD2 5050.1.1 236-460 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991411 Q87KB0_nD1 7516.1.1 1-245 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002991412 Q87KB0_nD2 208.1.1 246-435 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002991413 Q87QZ4_nD1 103.1.1 12-50 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002991414 Q87I20_nD1 5067.1.1 1-45,67-160 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002991415 Q87L76_nD1 5084.5.1 36-254 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991416 Q79YZ0_nD1 3747.1.1 1-135 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002991417 Q87LC4_nD1 7504.1.1 6-189 'ITPase-like' 'ITPase-like' 'ITPase-like' 'a/b three-layered sandwiches' 002991418 Q87S45_nD1 2002.1.1 1-210,231-245 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991419 Q87KA3_nD1 5045.1.1 11-265 'F1F0 ATP synthase subunit A' 'F1F0 ATP synthase subunit A' 'F1F0 ATP synthase subunit A' 'alpha bundles' 002991420 Q87FE2_nD2 4.1.1 111-175 'SH3' 'SH3' 'SH3' 'beta barrels' 002991421 Q87FE2_nD1 5058.1.1 16-85 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002991422 Q87G16_nD3 4.1.1 181-250 'SH3' 'SH3' 'SH3' 'beta barrels' 002991423 Q87G16_nD4 304.39.1 251-355 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002991424 Q87G16_nD2 5058.1.1 96-180 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002991425 Q87G16_nD1 5058.1.1 16-95 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002991426 Q87S35_nD1 6055.1.1 21-45 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002991427 Q87S35_nD2 4.1.1 46-105 'SH3' 'SH3' 'SH3' 'beta barrels' 002991428 Q87IA0_nD1 3355.1.1 6-450 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002991429 Q87IM3_nD1 2004.1.1 11-220 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991430 Q87IM3_nD2 2004.1.1 221-395 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991431 Q87ML7_nD1 3466.1.1 46-235 'Phospholipid translocation channel MlaA' 'Phospholipid translocation channel MlaA' 'Phospholipid translocation channel MlaA' 'alpha arrays' 002991432 Q87K94_nD1 2004.1.1 21-290 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991433 Q87FQ0_nD1 306.1.1 21-95 'Glucose permease domain IIB' 'Glucose permease domain IIB' 'Glucose permease domain IIB-like' 'a+b two layers' 002991434 Q87P77_nD3 5001.1.1 391-460 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002991435 Q87P77_nD2 180.1.1 171-390 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'alpha bundles' 002991436 Q87P77_nD1 221.4.1 11-160 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002991437 Q87MV7_nD2 298.1.1 131-350 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002991438 Q87MV7_nD1 2003.1.1 1-130,351-370 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991439 Q87SY6_nD1 6055.1.1 36-70 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002991440 Q87SY6_nD2 101.15.1 116-199 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002991441 Q87M66_nD1 2.1.1 6-110 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991442 Q87SK8_nD1 2004.1.1 1-190 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991443 Q87SK8_nD2 148.1.3 191-270 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002991444 Q87SK8_nD4 144.1.1 456-525 'PGBD-like' 'PGBD-like' 'PGBD-like' 'alpha arrays' 002991445 Q87SK8_nD3 219.1.1 346-455,526-535 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002991446 Q87JV5_nD2 3331.1.1 6-15,66-130 'Uncharacterized protein yibL' 'Uncharacterized protein yibL' 'Uncharacterized protein yibL' 'a+b two layers' 002991447 Q87JV5_nD1 3711.1.1 16-65 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'alpha bundles' 002991448 Q87P04_nD3 1.1.7 26-40,241-325 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991449 Q87P04_nD1 325.1.7 41-80,206-240 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991450 Q87P04_nD2 5086.1.1 81-205 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991451 Q87R15_nD2 7591.1.1 211-310 'Tetraacyldisaccharide 4'-kinase C-terminal domain' 'Tetraacyldisaccharide 4'-kinase C-terminal domain' 'Tetraacyldisaccharide 4'-kinase C-terminal domain' 'a/b three-layered sandwiches' 002991452 Q87R15_nD1 2004.1.1 11-210,311-335 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991453 Q87IN7_nD1 5059.1.1 6-295 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002991454 Q87J09_nD2 107.1.1 251-410 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002991455 Q87J09_nD1 107.1.1 36-245 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002991456 Q87JC2_nD2 7523.1.1 81-293 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991457 Q87JC2_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002991458 Q87TP4_nD1 328.5.1 6-80 'SirA-like' 'SirA-like' 'IF3-like' 'a+b two layers' 002991459 Q87QN5_nD1 7577.1.1 46-290 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991460 Q87QN5_nD2 3016.1.1 291-380 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991461 Q87SJ7_nD1 221.4.1 11-205 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002991462 Q87JY8_nD1 2006.1.1 1-235 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991463 Q87S23_nD1 221.1.1 1-105 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991464 Q87JQ5_nD2 310.3.1 101-203 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002991465 Q87JQ5_nD1 7010.1.1 6-95 'Activation-binding domain of RNA polymerase II mediator' 'Activation-binding domain of RNA polymerase II mediator' 'Activation-binding domain of RNA polymerase II mediator' 'alpha arrays' 002991466 Q87PR6_nD1 3236.1.1 6-415 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002991467 Q87T99_nD1 UNASSIGNED 36-125 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002991468 Q87T99_nD2 1075.3.1 6-35,126-340 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991469 Q87HX4_nD2 11.1.1 96-185 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991470 Q87HX4_nD5 284.2.1 631-750 'Chitinase insertion domain' 'Chitinase insertion domain' 'FKBP-like' 'a+b two layers' 002991471 Q87HX4_nD1 64.3.1 31-85 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002991472 Q87HX4_nD6 11.1.5 841-980 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991473 Q87HX4_nD7 64.3.1 1001-1054 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002991474 Q87HX4_nD3 11.1.1 196-280 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991475 Q87HX4_nD4 2002.1.1 281-630,731-835 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991476 Q87GX1_nD1 3711.1.1 36-285 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'alpha bundles' 002991477 Q87NH4_nD2 1076.1.1 66-90 'Hypothetical protein RPA3313' 'Hypothetical protein RPA3313' 'Hypothetical protein RPA3313' 'alpha bundles' 002991478 Q87NH4_nD1 5074.1.1 31-65 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'Bacterial light-harvesting complex subunits' 'extended segments' 002991479 Q87KF8_nD1 5050.1.1 1-180 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991480 Q87KF8_nD2 5050.1.1 186-380 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991481 Q87FM4_nD1 2007.1.14 26-175 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991482 Q87FM4_nD2 2007.1.14 176-305 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991483 Q87RV1_nD1 331.20.1 11-125 'Curlin genes transcriptional regulator' 'Curlin genes transcriptional regulator' 'TBP-like' 'a+b two layers' 002991484 Q87HY0_nD4 4168.1.1 321-400 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991485 Q87HY0_nD7 225.1.1 631-790 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991486 Q87HY0_nD3 601.4.1 141-260 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991487 Q87HY0_nD5 223.1.1 406-545 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991488 Q87HY0_nD2 601.4.1 51-140,261-300 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991489 Q87HY0_nD6 605.1.1 561-630 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991490 Q87HY0_nD1 601.4.1 16-50 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991491 Q87FN7_nD2 12.1.1 456-535 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002991492 Q87FN7_nD1 2002.1.1 36-455 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991493 Q87SL0_nD2 7014.1.1 66-210 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002991494 Q87SL0_nD1 7014.1.1 1-60,211-265 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002991495 Q87GY9_nD4 2002.5.1 501-763 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002991496 Q87GY9_nD3 304.48.1 326-500 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002991497 Q87GY9_nD1 223.1.1 16-295 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991498 Q87GY9_nD2 223.1.1 6-15,296-325 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991499 Q87LS3_nD1 235.1.1 26-200 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002991500 Q87RM0_nD2 304.3.1 61-125 'HMA, heavy metal-associated domain' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002991501 Q87RM0_nD5 5073.1.3 241-395,506-580,856-910 'Potassium-transporting ATPase subunit KdpB transmembrane domain' 'Calcium ATPase transmembrane domain-related' 'Calcium ATPase transmembrane domain-related' 'alpha bundles' 002991502 Q87RM0_nD1 304.3.1 6-60 'HMA, heavy metal-associated domain' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002991503 Q87RM0_nD6 267.1.1 611-725 'Metal cation-transporting ATPase, ATP-binding domain' 'Metal cation-transporting ATPase, ATP-binding domain' 'Metal cation-transporting ATPase, ATP-binding domain' 'a+b complex topology' 002991504 Q87RM0_nD7 2006.1.1 496-505,581-610,726-855 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991505 Q87RM0_nD3 304.3.1 171-240 'HMA, heavy metal-associated domain' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002991506 Q87RM0_nD4 10.13.1 396-495 'Calcium ATPase, transduction domain A' 'Calcium ATPase, transduction domain A' 'jelly-roll' 'beta sandwiches' 002991507 Q87J69_nD1 236.1.1 1-165,291-345 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002991508 Q87J69_nD2 2003.1.1 166-290 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991509 Q87G59_nD1 2004.1.1 1-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991510 Q87ND6_nD2 4014.1.1 161-345 'a+b domain in type II DNA topoisomerase' 'a+b domain in type II DNA topoisomerase' 'a+b domain in type II DNA topoisomerase' 'a+b two layers' 002991511 Q87ND6_nD1 101.1.2 11-160 'winged' 'HTH' 'HTH' 'alpha arrays' 002991512 Q87ND6_nD4 5.2.1 526-840 'beta-pinwheel' 'beta-pinwheel' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002991513 Q87ND6_nD3 4016.1.1 346-525 'alpha-helical domain in type II DNA topoisomerase' 'alpha-helical domain in type II DNA topoisomerase' 'alpha-helical domain in type II DNA topoisomerase' 'alpha bundles' 002991514 Q87NK7_nD1 213.1.1 16-170 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991515 Q87QV1_nD1 2484.1.1 1-165 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991516 Q87TM3_nD1 3291.1.1 31-55 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002991517 Q87JR3_nD1 5051.1.1 6-415 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002991518 Q87P18_nD1 11.1.1 31-135 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991519 Q87PL7_nD1 219.1.1 31-155 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002991520 Q87IG5_nD2 7523.1.1 81-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991521 Q87IG5_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002991522 Q87KV0_nD1 5050.1.1 6-190 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991523 Q87KV0_nD2 5050.1.1 191-390 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991524 Q87HN1_nD1 2004.1.1 6-235,456-483 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991525 Q87HN1_nD2 2007.1.1 241-450 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991526 Q87FD5_nD1 306.1.1 6-85 'Glucose permease domain IIB' 'Glucose permease domain IIB' 'Glucose permease domain IIB-like' 'a+b two layers' 002991527 Q87FD5_nD2 3227.1.1 111-210,231-480 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002991528 Q87LP7_nD4 143.2.1 496-560 'Ribosomal protein L20' 'Ribosomal protein L20' 'PABP domain-like' 'alpha arrays' 002991529 Q87LP7_nD3 221.1.1 391-495 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991530 Q87LP7_nD5 1077.1.1 591-660 'RelA zinc-finger domain' 'RelA zinc-finger domain' 'RelA zinc-finger domain' 'few secondary structure elements' 002991531 Q87LP7_nD2 316.1.1 206-375 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002991532 Q87LP7_nD6 304.8.1 661-739 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002991533 Q87LP7_nD1 131.1.1 11-205 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002991534 Q87L14_nD1 3148.1.1 38-120 'putative secreted protein PA3611' 'putative secreted protein PA3611' 'putative secreted protein PA3611' 'a+b two layers' 002991535 Q87L28_nD1 2004.1.1 1-540 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991536 Q87L28_nD2 3755.3.1 541-639 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002991537 Q05939_nD1 9.1.1 26-170 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002991538 Q87QR2_nD3 331.2.1 336-475,511-520 'Phosphoglucomutase, C-terminal domain' 'Phosphoglucomutase, C-terminal domain' 'TBP-like' 'a+b two layers' 002991539 Q87QR2_nD4 601.20.1 531-665 'Apolipophorin-III' 'Apolipophorin-III' 'Four-helical up-and-down bundle' 'alpha bundles' 002991540 Q87QR2_nD1 2008.1.1 1-190 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002991541 Q87QR2_nD2 295.1.1 206-335 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain-like' 'a+b two layers' 002991542 Q87MG3_nD1 2484.1.1 6-190 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991543 Q87KX9_nD1 4.1.1 1-65 'SH3' 'SH3' 'SH3' 'beta barrels' 002991544 Q87KX9_nD2 2.1.1 66-130 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991545 Q87KX9_nD3 2.1.1 131-188 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991546 Q87HM5_nD1 2484.1.1 1-30 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991547 Q87TM0_nD1 5054.1.1 41-95 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002991548 Q87TM0_nD2 1075.3.1 21-40,96-340 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991549 Q87H22_nD1 221.1.3 72-320 'Sulfite oxidase, middle catalytic domain' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991550 Q87H22_nD2 11.1.1 321-435 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991551 Q87IZ7_nD2 2498.1.1 106-320 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002991552 Q87IZ7_nD1 632.22.1 1-105 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002991553 Q87RW3_nD1 2492.1.1 1-150 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002991554 Q87H81_nD2 2007.1.2 126-255 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991555 Q87H81_nD1 2007.1.2 16-125,256-285 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991556 Q87GG4_nD1 241.1.1 6-135 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002991557 Q87LP4_nD7 2007.1.3 656-795 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991558 Q87LP4_nD5 225.1.1 356-520 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991559 Q87LP4_nD8 601.3.1 816-930 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002991560 Q87LP4_nD2 4168.1.1 196-250 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991561 Q87LP4_nD6 2007.1.3 531-655 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991562 Q87LP4_nD4 605.1.1 296-355 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991563 Q87LP4_nD3 223.1.1 251-280 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991564 Q87LP4_nD1 223.1.1 6-195 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991565 Q87M49_nD1 109.4.1 26-338 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991566 Q87RR2_nD1 7577.1.1 6-415 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991567 Q87GL7_nD1 2485.1.1 6-130 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002991568 Q87GL7_nD2 109.1.1 131-280 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002991569 Q87K81_nD3 1075.1.2 6-50,276-420 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991570 Q87K81_nD1 304.128.1 51-105,231-275 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002991571 Q87K81_nD2 1.1.2 106-230 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991572 Q87JD3_nD1 9.1.1 71-174 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002991573 Q87HC7_nD1 223.9.1 6-230 'Pa0076-like' 'Pa0076-like' 'Profilin-like' 'a+b three layers' 002991574 Q87PP9_nD1 2007.2.1 1-194 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991575 Q87MA5_nD1 327.2.1 1-95 'BolA-like' 'BolA-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002991576 Q87S89_nD1 1046.1.1 11-169 'Lipoprotein signal peptidase' 'Lipoprotein signal peptidase' 'Lipoprotein signal peptidase' 'alpha bundles' 002991577 Q87RM6_nD1 7002.1.1 11-35 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'alpha duplicates or obligate multimers' 002991578 Q87GT6_nD3 4168.1.1 311-360 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991579 Q87GT6_nD7 2007.1.3 756-880 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991580 Q87GT6_nD4 605.1.1 361-450 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991581 Q87GT6_nD2 601.4.1 51-285 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991582 Q87GT6_nD5 225.1.1 451-615 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991583 Q87GT6_nD1 3479.1.1 1-50,286-310 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002991584 Q87GT6_nD6 2007.1.3 616-755 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991585 Q87JP9_nD5 3834.1.1 406-445,611-640 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'TcA alpha pore-forming domain' 'alpha bundles' 002991586 Q87JP9_nD2 601.4.1 11-40,301-325 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991587 Q87JP9_nD6 5086.1.1 446-610 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991588 Q87JP9_nD1 601.4.1 41-165 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991589 Q87JP9_nD4 4168.1.1 1-10,326-390 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991590 Q87JP9_nD7 601.1.1 391-405,641-665 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002991591 Q87JP9_nD3 601.4.1 171-300 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991592 Q87FL9_nD1 5050.1.1 1-190 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991593 Q87FL9_nD2 5050.1.1 191-400 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991594 Q87M29_nD1 375.1.1 1-40 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002991595 Q87M29_nD2 2004.1.1 41-280 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991596 Q87M29_nD3 212.1.1 281-390 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002991597 Q87M29_nD4 3010.1.1 391-459 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'a/b three-layered sandwiches' 002991598 Q87H80_nD1 5065.1.1 21-320 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002991599 Q87QL4_nD4 632.25.1 601-640,676-775 'GBS CAMP factor N-terminal domain' 'GBS CAMP factor N-terminal domain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002991600 Q87QL4_nD3 11.1.4 436-480,506-600 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991601 Q87QL4_nD1 11.1.1 31-255 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991602 Q87QL4_nD2 11.1.4 261-335,426-435 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991603 Q87GY0_nD1 2002.1.1 6-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991604 Q87L81_nD1 2007.6.1 1-550 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991605 Q87KH2_nD1 5.1.8 6-45 'putative conserved lipoprotein NT01CX_1156' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002991606 Q87M22_nD1 2002.1.1 1-258 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991607 Q87RN1_nD2 109.4.1 166-260 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991608 Q87RN1_nD1 219.1.1 6-145 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002991609 Q87FH0_nD2 6155.1.1 71-160 'SWEET transporter' 'SWEET transporter' 'TOG superfamily' 'alpha duplicates or obligate multimers' 002991610 Q87FH0_nD1 3579.1.1 6-70 'NADH-quinone oxidoreductase subunit J' 'NADH-quinone oxidoreductase subunit J' 'NADH-quinone oxidoreductase subunit J' 'extended segments' 002991611 Q87L61_nD2 2.1.1 316-430 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991612 Q87L61_nD1 235.1.1 11-45,66-250 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002991613 Q87L61_nD4 223.3.1 256-315,431-475,571-620,651-845 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002991614 Q87L61_nD3 4019.1.1 476-570 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002991615 Q87I21_nD1 101.1.9 6-135 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002991616 Q87PB8_nD1 1023.1.1 1-90 'Cell division protein ZapC N-terminal domain' 'Cell division protein ZapC N-terminal domain' 'Cell division protein ZapC N-terminal domain' 'beta barrels' 002991617 Q87PB8_nD2 4.1.1 91-165 'SH3' 'SH3' 'SH3' 'beta barrels' 002991618 Q87TC8_nD2 310.3.1 56-164 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002991619 Q87TC8_nD1 6055.1.1 1-50 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002991620 Q87IW0_nD1 3236.1.1 6-345 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002991621 Q87L25_nD1 4137.1.1 1-70 'YehU-like' 'YehU-like' 'YehU-like' 'a+b three layers' 002991622 Q87KB7_nD1 4020.1.1 6-125 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b two layers' 002991623 Q87KB7_nD2 4045.1.1 126-305 'barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b two layers' 002991624 Q87J11_nD1 144.1.1 116-175 'PGBD-like' 'PGBD-like' 'PGBD-like' 'alpha arrays' 002991625 Q87N85_nD1 593.1.1 1-320 'GroEL equatorial domain-like' 'GroEL equatorial domain-like' 'GroEL equatorial domain-like' 'alpha bundles' 002991626 Q87QV9_nD1 206.1.3 6-315 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002991627 Q87G62_nD3 109.4.1 321-510 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991628 Q87G62_nD2 2006.1.6 81-295,591-618 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991629 Q87G62_nD1 3252.2.1 1-75,301-320 'Anaphase-promoting complex subunit 5 N-terminal domain' 'Anaphase-promoting complex subunit 5 N-terminal domain' 'SHQ1 C-terminal domain-like' 'alpha arrays' 002991630 Q87NX1_nD1 5051.1.1 11-470 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002991631 Q87JP2_nD1 377.1.1 12-45 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002991632 Q87IK2_nD1 7523.1.1 21-95,231-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991633 Q87IK2_nD2 7523.1.1 96-230 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991634 Q87HW8_nD1 213.1.1 6-169 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991635 Q87M34_nD1 2007.1.3 11-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991636 Q87M34_nD2 101.1.1 151-200 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991637 Q87M34_nD3 101.1.1 201-250 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991638 Q87RI9_nD1 904.1.1 1-25 'B-box zinc-binding domain' 'B-box zinc-binding domain' 'B-box zinc-binding domain-like' 'few secondary structure elements' 002991639 Q87RI9_nD2 3529.1.1 26-60 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'beta sandwiches' 002991640 Q87RI9_nD4 UNASSIGNED 181-270 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002991641 Q87RI9_nD3 230.5.1 61-180 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002991642 Q87GR4_nD1 2485.1.1 16-180 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002991643 Q87IZ8_nD1 604.8.1 11-90,123-160,216-295 'Smac/diablo' 'Smac/diablo' 'Spectrin repeat-like' 'alpha bundles' 002991644 Q87NQ3_nD1 3939.1.1 6-35 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002991645 Q87FI0_nD3 7523.1.1 371-405 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991646 Q87FI0_nD2 2004.1.1 211-370 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991647 Q87FI0_nD1 2004.1.1 1-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991648 Q87SB4_nD1 243.4.1 46-110 'DsbC/DsbG N-terminal domain-like' 'DsbC/DsbG N-terminal domain-like' 'Cystatin-like' 'a+b two layers' 002991649 Q87SB4_nD2 2485.1.1 111-260 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002991650 Q87LU9_nD1 7558.1.1 11-309 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002991651 Q87FU2_nD1 1.1.7 6-105 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991652 Q87FU2_nD2 7514.1.1 106-254 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002991653 Q87G35_nD1 2004.1.1 1-565 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991654 Q87K57_nD2 7523.1.1 91-299 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991655 Q87K57_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002991656 Q87MC3_nD1 314.1.1 1-240,386-465 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002991657 Q87MC3_nD2 299.1.1 251-385 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'a+b complex topology' 002991658 Q87MC3_nD3 7502.1.1 466-570 'Anticodon-binding domain of Class II aaRS' 'Anticodon-binding domain of Class II aaRS' 'Anticodon-binding domain of Class II aaRS' 'a/b three-layered sandwiches' 002991659 Q87GP8_nD1 101.1.1 6-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991660 Q87GP8_nD2 3567.1.1 101-140 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002991661 Q87S30_nD1 2488.1.1 1-235 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002991662 Q87Q25_nD1 243.5.1 36-130 'Amine oxidase N-terminal region' 'Amine oxidase N-terminal region' 'Cystatin-like' 'a+b two layers' 002991663 Q87K96_nD1 109.4.1 6-140 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991664 Q87RM4_nD1 6066.1.1 6-30 'Transmembrane domain of CD3 zeta chain' 'Transmembrane domain of CD3 zeta chain' 'Transmembrane domain of CD3 zeta chain' 'alpha duplicates or obligate multimers' 002991665 Q87MP3_nD1 2004.1.1 11-285 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991666 Q87MP3_nD2 7570.1.1 286-415 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'a/b three-layered sandwiches' 002991667 Q87Q56_nD1 101.17.1 1-90 'IHF-like DNA-binding proteins' 'IHF-like DNA-binding proteins' 'HTH' 'alpha arrays' 002991668 Q87KL9_nD1 605.1.1 1-85 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991669 Q87LD0_nD4 2004.1.1 431-680 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991670 Q87LD0_nD3 2004.1.1 121-430 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991671 Q87LD0_nD5 3509.1.1 701-969 'RapA C-terminal domain' 'RapA C-terminal domain' 'RapA C-terminal domain' 'a+b complex topology' 002991672 Q87LD0_nD2 4.1.1 56-120 'SH3' 'SH3' 'SH3' 'beta barrels' 002991673 Q87LD0_nD1 4.1.1 1-55 'SH3' 'SH3' 'SH3' 'beta barrels' 002991674 Q87MM1_nD1 142.1.1 16-105 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002991675 Q87MM1_nD2 101.1.1 106-185 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991676 Q87TE1_nD1 2004.11.1 11-225 'PEP carboxykinase N-terminal domain' 'PEP carboxykinase N-terminal domain' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991677 Q87TE1_nD2 2004.1.2 226-540 'PEP carboxykinase catalytic C-terminal domain' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991678 Q87TJ1_nD1 606.1.1 6-105 'Nop N-terminal domain' 'Nop N-terminal domain' 'Nop N-terminal domain' 'alpha complex topology' 002991679 Q87KP5_nD2 313.1.1 206-340 'Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain' 'Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain' 'Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain' 'a+b complex topology' 002991680 Q87KP5_nD1 217.1.1 1-200 'FAD-binding domain' 'FAD-binding domain' 'FAD-binding domain-like' 'a+b complex topology' 002991681 Q87MB4_nD4 302.1.1 246-354 'Lesion bypass DNA polymerase (Y-family), little finger domain' 'Lesion bypass DNA polymerase (Y-family), little finger domain' 'Reverse ferredoxin' 'a+b two layers' 002991682 Q87MB4_nD3 102.1.1 181-245 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991683 Q87MB4_nD1 850.1.1 26-80 'Hypothetical protein Ta1206-like' 'Hypothetical protein Ta1206-like' 'Hypothetical protein Ta1206-like' 'a+b three layers' 002991684 Q87MB4_nD2 304.48.1 6-25,81-180 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002991685 Q87IK6_nD1 7515.1.1 58-605 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002991686 Q87IK6_nD2 10.1.1 611-789 'Concanavalin A-like lectins/glucanases' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002991687 Q87N38_nD2 2007.1.3 166-315 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991688 Q87N38_nD1 2.10.1 21-165 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002991689 Q87G95_nD1 322.1.1 6-90 'HPr-like' 'HPr-like' 'HPr-like' 'a+b two layers' 002991690 Q87G95_nD2 311.1.1 111-255 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002991691 Q87NT7_nD2 321.1.1 126-175,196-460 'Glutamine synthetase/guanido kinase' 'Glutamine synthetase/guanido kinase' 'Glutamine synthetase-like' 'a+b two layers' 002991692 Q87NT7_nD1 239.4.1 16-125 'Glutamine synthetase, N-terminal domain' 'Glutamine synthetase, N-terminal domain' 'Ribosomal protein L25-like' 'beta barrels' 002991693 Q87NM5_nD1 4312.1.1 1-90 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002991694 Q87N04_nD1 3355.1.1 1-515 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002991695 Q87QX5_nD2 7512.1.1 256-470 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991696 Q87QX5_nD1 7512.1.1 6-255,471-485 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002991697 Q87HY8_nD1 2002.5.1 11-265 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002991698 Q79YY7_nD2 4167.1.1 71-205 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'beta complex topology' 002991699 Q79YY7_nD1 3747.1.1 1-70,206-245 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002991700 Q87IX7_nD1 3156.1.1 71-193 'Cupredoxin-related' 'Cupredoxin-related' 'Cupredoxin-like' 'beta sandwiches' 002991701 Q87IL0_nD5 3755.4.1 241-270,481-515 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'YscO-like' 'alpha bundles' 002991702 Q87IL0_nD2 1075.4.1 146-170 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991703 Q87IL0_nD1 223.1.1 11-135 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991704 Q87IL0_nD4 3755.3.1 271-480 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002991705 Q87IL0_nD3 4168.1.1 171-240 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991706 Q87JN4_nD3 4.31.1 136-228 'Central WYL domain of RspWYL1' 'Central WYL domain of RspWYL1' 'SH3' 'beta barrels' 002991707 Q87JN4_nD1 101.1.2 1-60 'winged' 'HTH' 'HTH' 'alpha arrays' 002991708 Q87JN4_nD2 101.1.2 66-135 'winged' 'HTH' 'HTH' 'alpha arrays' 002991709 Q87RX7_nD1 192.15.1 51-195 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002991710 Q87RX7_nD2 11.2.1 196-419 'C2 domain' 'C2 domain' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991711 Q87SW8_nD1 2485.1.1 21-183 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002991712 Q87PL9_nD2 304.48.1 156-315 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002991713 Q87PL9_nD1 223.1.1 1-155 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991714 Q87KY6_nD1 314.1.1 6-323 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002991715 Q87P78_nD2 3012.1.1 86-190 'Cof C2 cap domain' 'Cof C2 cap domain' 'Cof C2 cap domain' 'a+b two layers' 002991716 Q87P78_nD1 2006.1.1 1-85,191-265 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991717 Q87MN1_nD1 6106.1.1 6-40 'Photosystem II protein Y, psbY' 'Photosystem II protein Y, psbY' 'Photosystem II protein Y, psbY' 'extended segments' 002991718 Q87NT4_nD1 304.4.1 1-90 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002991719 Q87FX9_nD1 1.1.10 41-120 'Surface presentation of antigens (SPOA)' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991720 Q87MY6_nD2 1075.3.1 6-25,66-300 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991721 Q87MY6_nD1 150.1.1 26-65 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002991722 Q87MM9_nD1 875.1.1 1-360 'Chorismate synthase, AroC' 'Chorismate synthase, AroC' 'Chorismate synthase, AroC' 'a+b two layers' 002991723 Q87NQ5_nD1 603.1.1 21-129 't-snare proteins' 't-snare proteins' 'STAT-like' 'alpha bundles' 002991724 Q87RR4_nD2 7503.1.1 171-310 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002991725 Q87RR4_nD1 101.1.2 6-120,141-165 'winged' 'HTH' 'HTH' 'alpha arrays' 002991726 Q87RR4_nD3 109.4.1 316-495 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991727 Q87FU1_nD1 222.1.1 1-150 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002991728 Q87N22_nD1 2003.1.1 1-244 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991729 Q79YY5_nD2 3943.1.1 191-280 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'beta sandwiches' 002991730 Q79YY5_nD1 601.51.1 1-190,281-395 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002991731 Q87P61_nD1 605.1.1 61-130 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991732 Q87P61_nD2 3758.1.1 131-165 'Bacterial hemolysins' 'Bacterial hemolysins' 'Bacterial hemolysins-like' 'alpha bundles' 002991733 Q87P61_nD5 150.5.1 371-395 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002991734 Q87P61_nD3 604.12.1 166-265 'MIT domain' 'MIT domain' 'Spectrin repeat-like' 'alpha bundles' 002991735 Q87P61_nD4 109.4.1 266-295 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991736 Q87FX6_nD1 5045.1.1 11-255 'F1F0 ATP synthase subunit A' 'F1F0 ATP synthase subunit A' 'F1F0 ATP synthase subunit A' 'alpha bundles' 002991737 Q87L26_nD1 7579.1.1 6-330 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002991738 Q87HW5_nD1 2006.1.1 1-220 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991739 Q87N92_nD1 2007.1.3 1-120 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991740 Q87N92_nD2 101.1.2 121-225 'winged' 'HTH' 'HTH' 'alpha arrays' 002991741 Q87PY6_nD3 605.1.1 181-315 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991742 Q87PY6_nD1 5011.1.1 6-30 'Bacterial ba3 type cytochrome c oxidase subunit IIa' 'Bacterial ba3 type cytochrome c oxidase subunit IIa' 'Bacterial ba3 type cytochrome c oxidase subunit IIa' 'extended segments' 002991743 Q87PY6_nD2 1.1.16 36-180 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991744 Q87QH3_nD4 1.1.7 26-40,271-340 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991745 Q87QH3_nD3 1.1.7 41-55,186-270 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991746 Q87QH3_nD1 5086.1.1 91-150 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991747 Q87QH3_nD2 325.1.7 56-90,151-185 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991748 Q87HG7_nD1 3473.1.1 1-40 'Twin-arginine transport (Tat) system component TatA' 'Twin-arginine transport (Tat) system component TatA' 'Twin-arginine transport (Tat) system component TatA' 'extended segments' 002991749 Q87HG7_nD2 632.22.1 41-80 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002991750 Q87KJ4_nD1 286.1.1 1-130 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002991751 Q87KJ4_nD2 286.1.1 131-275 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002991752 Q87KI7_nD3 601.13.1 161-225,371-400 'Flagellar export chaperone FliS' 'Flagellar export chaperone FliS' 'Four-helical up-and-down bundle' 'alpha bundles' 002991753 Q87KI7_nD4 633.4.1 226-250,296-370 'Plant invertase/pectin methylesterase inhibitor' 'Plant invertase/pectin methylesterase inhibitor' 'Bromodomain-like' 'alpha bundles' 002991754 Q87KI7_nD1 3465.1.1 66-90 'Subunit PsaX of photosystem I reaction centre' 'Subunit PsaX of photosystem I reaction centre' 'Subunit PsaX of photosystem I reaction centre' 'extended segments' 002991755 Q87KI7_nD2 192.8.1 91-155 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002991756 Q87GP9_nD4 2004.1.1 301-490 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991757 Q87GP9_nD3 101.1.2 166-300 'winged' 'HTH' 'HTH' 'alpha arrays' 002991758 Q87GP9_nD1 2.1.1 6-95 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991759 Q87GP9_nD6 4.1.1 571-645 'SH3' 'SH3' 'SH3' 'beta barrels' 002991760 Q87GP9_nD5 2004.1.1 491-570,646-670 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991761 Q87GP9_nD2 102.1.1 96-165 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991762 Q87KI6_nD2 109.4.1 231-390 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991763 Q87KI6_nD1 109.4.1 26-230 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991764 Q87GW0_nD1 2003.1.1 1-245 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991765 Q87K67_nD1 3236.2.1 6-410 'Sodium-dependent citrate symporter' 'Sodium-dependent citrate symporter' 'Cation-proton antiporter' 'alpha complex topology' 002991766 Q87SM3_nD1 101.1.9 1-54 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002991767 Q87H12_nD1 2004.1.1 11-270 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991768 Q87RE9_nD2 323.1.1 166-400 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002991769 Q87RE9_nD1 325.1.7 1-80 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991770 Q87NV0_nD2 2002.5.1 1-15,241-495 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002991771 Q87NV0_nD1 223.1.1 16-240 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991772 Q87T45_nD2 1075.5.1 186-390 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991773 Q87T45_nD1 1075.5.1 1-180 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991774 Q87MR4_nD1 304.4.1 1-94 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002991775 Q87N88_nD1 7561.1.1 1-180 'Isochorismatase-like hydrolases' 'Isochorismatase-like hydrolases' 'Isochorismatase-like hydrolases' 'a/b three-layered sandwiches' 002991776 Q87TE5_nD1 5067.1.1 141-170 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002991777 Q87TE5_nD2 5038.1.1 6-60,111-135,186-285 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002991778 Q87QH9_nD1 1075.3.1 1-145,176-315 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002991779 Q87PL8_nD1 4009.1.1 6-110 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha-helical domain in AF1104-like proteins' 'alpha bundles' 002991780 Q87IT9_nD3 325.1.6 261-425 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991781 Q87IT9_nD2 3953.1.1 161-260 'Csd3 N-terminal domain' 'Csd3 N-terminal domain' 'Csd3 N-terminal domain' 'a+b two layers' 002991782 Q87IT9_nD1 101.15.1 71-160 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002991783 Q87KQ8_nD1 261.1.1 41-178 'Hect, E3 ligase catalytic domain' 'Hect, E3 ligase catalytic domain' 'Hect, E3 ligase catalytic domain' 'a+b complex topology' 002991784 Q87MG5_nD2 2496.1.1 421-565 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002991785 Q87MG5_nD1 3226.1.1 16-420 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002991786 Q87RV5_nD1 2011.1.1 6-185,401-490 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002991787 Q87RV5_nD2 304.25.1 186-400 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002991788 Q87T63_nD1 2003.1.1 1-253 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991789 Q87J91_nD1 5085.1.1 21-120,146-495 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002991790 Q87QM6_nD1 268.1.1 16-135 'Sterol carrier protein, SCP-related' 'Sterol carrier protein, SCP-related' 'Sterol carrier protein-like' 'a+b two layers' 002991791 Q87QM6_nD2 2003.1.5 136-418 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991792 Q87H44_nD2 4052.1.1 116-235 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'beta complex topology' 002991793 Q87H44_nD1 4033.1.1 6-115 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'alpha arrays' 002991794 Q87H44_nD3 633.6.1 236-384 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002991795 Q87GF4_nD4 3713.1.1 296-330 'Small terminase central domain' 'Small terminase central domain' 'Small terminase central domain' 'alpha bundles' 002991796 Q87GF4_nD3 7519.1.1 236-260 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'a/b three-layered sandwiches' 002991797 Q87GF4_nD1 1014.1.1 91-115 'AopB' 'AopB' 'AopB' 'alpha arrays' 002991798 Q87GF4_nD2 192.15.1 81-90,116-200 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002991799 Q87IC8_nD1 101.1.2 26-125 'winged' 'HTH' 'HTH' 'alpha arrays' 002991800 Q87RN6_nD1 71.1.1 26-203 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002991801 Q87L68_nD1 2007.1.7 1-175 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991802 Q87L68_nD2 4002.1.1 176-365 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002991803 Q87M88_nD3 9.7.1 61-145 'Metalloprotease inhibitor' 'Metalloprotease inhibitor' 'Lipocalins/Streptavidin' 'beta barrels' 002991804 Q87M88_nD2 3223.1.1 26-55 'Amiloride-sensitive cation channel 2' 'Amiloride-sensitive cation channel 2' 'Amiloride-sensitive cation channel 2' 'beta sandwiches' 002991805 Q87M88_nD1 887.1.1 1-25 'Ribosomal protein L30p/L7e' 'Ribosomal protein L30p/L7e' 'Ribosomal protein L30p/L7e' 'a+b two layers' 002991806 Q87LS8_nD1 837.1.1 1-80 'Ribosomal protein S16' 'Ribosomal protein S16' 'Ribosomal protein S16' 'a+b two layers' 002991807 Q87K16_nD1 2003.6.1 1-305 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002991808 Q87SP7_nD1 11.1.4 31-210 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991809 Q87SP7_nD2 11.1.4 211-349 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991810 Q87HZ9_nD1 325.1.7 66-105,166-200 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002991811 Q87HZ9_nD2 5086.1.1 106-165 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002991812 Q87HZ9_nD4 1.1.7 41-50,286-355 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991813 Q87HZ9_nD3 1.1.7 51-65,201-285 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002991814 Q87QA8_nD2 102.1.1 116-190 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991815 Q87QA8_nD1 241.7.1 6-105 'YgaC/TfoX-N like' 'YgaC/TfoX-N like' 'Type III secretory system chaperone-like' 'a+b two layers' 002991816 Q87QC7_nD1 139.1.1 36-180 'Cytochrome c3-like' 'Cytochrome c3-like' 'Multiheme cytochromes' 'few secondary structure elements' 002991817 Q87KU0_nD1 5050.1.1 6-185 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991818 Q87KU0_nD2 5050.1.1 186-385 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991819 Q87HE6_nD1 7525.1.1 1-170 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'a/b three-layered sandwiches' 002991820 Q87IE9_nD1 2007.1.14 21-160 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991821 Q87IE9_nD2 2007.1.14 161-300 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991822 Q87NY1_nD1 211.1.1 1-120 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002991823 Q87QA5_nD3 225.1.1 321-640 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991824 Q87QA5_nD2 10.12.1 181-320 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002991825 Q87QA5_nD1 2007.1.3 1-175 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991826 Q87Q47_nD1 2003.1.1 6-230 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991827 Q87FJ6_nD1 2485.1.1 1-170 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002991828 Q87KE4_nD1 2007.1.6 6-105 'Aminoacid dehydrogenase-like, N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991829 Q87KE4_nD2 2003.1.1 106-275 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991830 Q87QM4_nD1 813.1.1 21-185 'Chalcone isomerase' 'Chalcone isomerase' 'Chalcone isomerase' 'a+b two layers' 002991831 Q87HC1_nD1 206.1.1 81-360 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002991832 Q87HC1_nD2 3860.1.1 366-405 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002991833 Q87HC1_nD5 109.3.1 616-714 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991834 Q87HC1_nD3 109.4.1 406-545 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991835 Q87HC1_nD4 109.4.1 546-615 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991836 Q87RC6_nD3 102.1.1 311-388 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991837 Q87RC6_nD1 2484.1.1 16-205 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991838 Q87RC6_nD2 102.1.1 211-310 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991839 Q87H18_nD2 327.5.1 316-400 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002991840 Q87H18_nD1 7584.1.1 11-315 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002991841 Q87IV9_nD1 101.1.2 6-113 'winged' 'HTH' 'HTH' 'alpha arrays' 002991842 Q87HT7_nD3 2002.5.1 366-625 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002991843 Q87HT7_nD2 304.48.1 201-365 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002991844 Q87HT7_nD1 223.1.1 6-180 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991845 Q87S29_nD1 101.1.2 1-145 'winged' 'HTH' 'HTH' 'alpha arrays' 002991846 Q87PD3_nD3 2007.2.4 236-265,531-540 'Phosphoinositide phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991847 Q87PD3_nD4 304.8.1 266-450 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002991848 Q87PD3_nD2 601.42.1 96-195 'Helical bundle in ROQ domain' 'Helical bundle in ROQ domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002991849 Q87PD3_nD5 213.1.1 451-530 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991850 Q87PD3_nD1 148.1.3 16-95,196-235 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002991851 Q87PD3_nD6 3018.1.1 556-605 'MesJ substrate recognition domain-like' 'MesJ substrate recognition domain-like' 'MesJ substrate recognition domain-like' 'a+b two layers' 002991852 Q79YV3_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002991853 Q79YV3_nD2 7523.1.1 91-155,266-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991854 Q79YV3_nD3 7523.1.1 156-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991855 Q87RY8_nD1 5084.1.1 31-185 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002991856 Q87KJ7_nD1 2006.1.1 6-238 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002991857 Q87I92_nD1 109.4.1 46-330 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991858 Q87I92_nD2 2498.1.1 331-590 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002991859 Q87I92_nD3 10.1.2 601-705 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002991860 Q87LW6_nD1 5049.1.1 11-405 'Ammonium transporter' 'Ammonium transporter-related' 'Ammonium transporter-related' 'alpha complex topology' 002991861 Q87K58_nD1 101.1.11 23-88 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002991862 Q87I42_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991863 Q87I42_nD2 101.1.2 136-220 'winged' 'HTH' 'HTH' 'alpha arrays' 002991864 Q87P64_nD2 7014.1.1 71-205 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002991865 Q87P64_nD1 7014.1.1 6-65,206-255 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002991866 Q87GQ9_nD3 2008.1.1 96-140,261-480 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002991867 Q87GQ9_nD1 109.4.1 1-79 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991868 Q87GQ9_nD2 141.1.1 126-260,486-534 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002991869 Q87SY3_nD2 101.1.2 141-185 'winged' 'HTH' 'HTH' 'alpha arrays' 002991870 Q87SY3_nD1 10.12.1 6-140 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002991871 Q87KL6_nD1 5001.1.1 16-205 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002991872 Q87TE6_nD1 3684.1.1 21-110,131-213 'PSPTO4464 C-terminal domain-like' 'PSPTO4464 C-terminal domain-like' 'PSPTO4464 C-terminal domain-like' 'alpha complex topology' 002991873 Q87Q96_nD2 821.1.1 66-220 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'a+b three layers' 002991874 Q87Q96_nD1 4.1.1 1-50,241-274 'SH3' 'SH3' 'SH3' 'beta barrels' 002991875 Q87L72_nD1 304.12.1 1-120 'Ribosomal protein S6' 'Ribosomal protein S6' 'Alpha-beta plaits' 'a+b two layers' 002991876 Q87TC1_nD1 101.1.11 86-140 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002991877 Q87T55_nD3 5084.5.4 436-725 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991878 Q87T55_nD1 5084.5.1 26-290 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991879 Q87T55_nD2 327.5.1 316-435 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002991880 Q87I22_nD1 289.1.1 1-165 'Peptide deformylase' 'Peptide deformylase' 'Peptide deformylase' 'a+b complex topology' 002991881 Q87GQ5_nD1 378.1.1 1-160 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002991882 Q87GQ5_nD2 4006.1.1 171-205 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'alpha bundles' 002991883 Q87RA9_nD1 222.1.1 1-145 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002991884 Q87MF5_nD1 107.1.1 21-103 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002991885 Q87SY8_nD1 4198.2.1 46-155 'TTHA1432-like' 'TTHA1432-like' 'TerB-like' 'alpha arrays' 002991886 Q87T12_nD1 7559.1.1 1-200 'Ribosomal protein L4' 'Ribosomal protein L4' 'Ribosomal protein L4' 'a/b three-layered sandwiches' 002991887 Q87NY9_nD1 213.1.1 11-203 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991888 Q87L01_nD1 2484.1.1 6-180 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991889 Q87RF6_nD2 7509.1.1 96-220 'NIF3 (NGG1p interacting factor 3)-like' 'NIF3 (NGG1p interacting factor 3)-like' 'NIF3 (NGG1p interacting factor 3)-like' 'a/b three-layered sandwiches' 002991890 Q87RF6_nD1 7509.1.1 1-95,221-250 'NIF3 (NGG1p interacting factor 3)-like' 'NIF3 (NGG1p interacting factor 3)-like' 'NIF3 (NGG1p interacting factor 3)-like' 'a/b three-layered sandwiches' 002991891 Q87GD0_nD2 101.1.9 101-120,206-395 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002991892 Q87GD0_nD1 375.1.1 16-83,121-205 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002991893 Q87LA9_nD2 148.1.3 1-20,186-270 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002991894 Q87LA9_nD1 2004.1.1 21-185 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991895 Q87ID1_nD1 601.4.1 6-140,286-355 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991896 Q87ID1_nD3 4168.1.1 356-420 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991897 Q87ID1_nD4 223.1.1 421-465 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991898 Q87ID1_nD6 225.1.1 536-695 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991899 Q87ID1_nD2 601.4.1 141-285 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002991900 Q87ID1_nD8 601.3.1 876-985 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002991901 Q87ID1_nD5 605.1.1 466-535 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991902 Q87ID1_nD7 2007.1.3 701-840 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991903 Q87KM5_nD1 2007.2.5 6-105 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991904 Q87IZ3_nD1 220.1.1 6-90 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002991905 Q87SB8_nD1 2003.1.5 6-239 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991906 Q87FL6_nD2 7523.1.1 141-290,376-410 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991907 Q87FL6_nD1 7523.1.1 18-140,291-375 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991908 Q87PR7_nD1 274.1.1 31-163 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002991909 Q87FK8_nD1 5065.1.1 21-329 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002991910 Q87Q88_nD1 11.1.1 36-125 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002991911 Q87Q88_nD2 246.2.1 126-380,411-555 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002991912 Q87Q88_nD3 2007.2.4 381-410 'Phosphoinositide phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991913 Q87R85_nD1 3355.1.1 1-450 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002991914 Q87TB3_nD2 2.1.1 46-145 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002991915 Q87TB3_nD1 102.1.1 6-45,151-175 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002991916 Q87TB3_nD3 2004.1.1 181-685 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991917 Q87RG9_nD2 2003.1.1 381-525 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991918 Q87RG9_nD1 3236.1.1 6-360 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002991919 Q87L83_nD1 101.1.2 6-150 'winged' 'HTH' 'HTH' 'alpha arrays' 002991920 Q87QR5_nD2 221.1.1 96-165 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991921 Q87QR5_nD1 221.1.1 21-95 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991922 Q87QR5_nD3 221.1.1 166-245 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991923 Q87LW9_nD1 2004.1.1 1-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991924 Q87LW9_nD2 2.4.1 241-343 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002991925 Q87Q08_nD3 283.1.1 306-595 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002991926 Q87Q08_nD2 2484.3.1 156-305 'Creatinase/prolidase N-terminal domain' 'Creatinase/prolidase N-terminal domain' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991927 Q87Q08_nD1 2484.3.1 6-155 'Creatinase/prolidase N-terminal domain' 'Creatinase/prolidase N-terminal domain' 'Ribonuclease H-like' 'mixed a+b and a/b' 002991928 Q87HF1_nD1 3355.1.1 21-260,286-510 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002991929 Q87R80_nD1 2486.1.1 6-200 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002991930 Q87P30_nD2 298.4.1 86-205 'V-type ATPase subunit E' 'V-type ATPase subunit E' 'FwdE/GAPDH domain-like' 'a+b two layers' 002991931 Q87P30_nD1 3462.1.1 11-85 'V-type proton ATPase subunit G' 'V-type proton ATPase subunit G' 'V-type proton ATPase subunit G' 'extended segments' 002991932 Q87N62_nD2 5069.1.1 216-355 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002991933 Q87N62_nD1 5069.1.1 11-215,356-365 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002991934 Q87S41_nD1 2002.1.1 16-544 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002991935 Q87MU2_nD1 101.1.2 11-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002991936 Q87MU2_nD2 316.2.1 96-195 'Rv2827c C-terminal domain-like' 'Rv2827c C-terminal domain-like' 'Nucleotidyltransferase-like' 'a+b three layers' 002991937 Q87IM8_nD2 UNASSIGNED 336-370 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002991938 Q87IM8_nD1 5.1.4 16-335,371-579 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002991939 Q87MS3_nD1 12.3.1 6-294 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002991940 Q87SG3_nD2 2004.1.1 111-325 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002991941 Q87SG3_nD1 2003.1.8 6-110 'MurCD/PglD N-terminal domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991942 Q87SG3_nD3 7570.1.1 326-480 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'a/b three-layered sandwiches' 002991943 Q87P86_nD1 301.3.1 81-200 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002991944 Q87SA4_nD1 221.4.1 1-155 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002991945 Q87S14_nD1 109.4.1 1-200 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002991946 Q87NR3_nD1 2008.1.1 66-180 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002991947 Q87NR3_nD2 101.1.2 206-260 'winged' 'HTH' 'HTH' 'alpha arrays' 002991948 Q87S53_nD1 7523.1.1 26-120,261-319 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991949 Q87S53_nD2 7523.1.1 121-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991950 Q87PK2_nD2 7523.1.1 106-220 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991951 Q87PK2_nD1 7523.1.1 26-105,221-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991952 Q87SE3_nD3 2003.1.2 241-400 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991953 Q87SE3_nD2 2003.1.3 141-240,401-470 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002991954 Q87SE3_nD1 187.1.1 1-140 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002991955 Q87MD3_nD1 633.14.1 1-104 'YqcC-like' 'YqcC-like' 'Bromodomain-like' 'alpha bundles' 002991956 Q87QC0_nD2 4052.1.1 171-305 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'beta complex topology' 002991957 Q87QC0_nD5 3151.1.1 656-735 'SPP1 phage GP23.1' 'SPP1 phage GP23.1' 'SPP1 phage GP23.1' 'alpha arrays' 002991958 Q87QC0_nD1 4033.1.1 61-170 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'alpha arrays' 002991959 Q87QC0_nD3 633.6.1 26-35,306-485 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002991960 Q87QC0_nD4 633.6.1 36-60,486-655 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002991961 Q87ND8_nD1 3711.1.1 62-125 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'LTXXQ motif family protein' 'alpha bundles' 002991962 Q87FN8_nD1 5022.1.1 11-45 'Subunit XII of photosystem I reaction centre, PsaM' 'Subunit XII of photosystem I reaction centre, PsaM' 'Subunit XII of photosystem I reaction centre, PsaM' 'extended segments' 002991963 Q87RB1_nD3 5067.1.1 421-465,631-775 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002991964 Q87RB1_nD2 304.28.1 56-265,466-630 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002991965 Q87RB1_nD1 5067.1.1 16-55,266-420 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002991966 Q87TD4_nD1 274.1.1 36-145 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002991967 Q87RL0_nD1 7503.1.1 41-180 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002991968 Q87RY6_nD2 101.1.1 171-215 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002991969 Q87RY6_nD1 7565.1.1 11-165 'Resolvase-like' 'Resolvase-like' 'Resolvase-like' 'a/b three-layered sandwiches' 002991970 Q87I05_nD3 3016.1.1 776-950 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991971 Q87I05_nD2 3016.1.1 391-450 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002991972 Q87I05_nD1 7577.1.1 1-390,471-775 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002991973 Q87QS2_nD4 101.1.8 336-395 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002991974 Q87QS2_nD3 101.1.8 206-335 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002991975 Q87QS2_nD1 252.2.1 6-90 'GCC-box binding domain-like' 'GCC-box binding domain-like' 'DNA-binding domain' 'a+b two layers' 002991976 Q87QS2_nD2 186.1.1 96-205 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002991977 Q87HJ0_nD1 5050.1.1 11-190 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991978 Q87HJ0_nD2 5050.1.1 191-380 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002991979 Q87NF8_nD1 3579.1.1 6-165 'NADH-quinone oxidoreductase subunit J' 'NADH-quinone oxidoreductase subunit J' 'NADH-quinone oxidoreductase subunit J' 'extended segments' 002991980 Q87I89_nD2 7523.1.1 86-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002991981 Q87I89_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002991982 Q87GE5_nD1 3243.1.1 246-484 'VopL dimerization domain' 'VopL dimerization domain' 'VopL dimerization domain' 'alpha complex topology' 002991983 Q87SW5_nD1 3121.1.1 13-95 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002991984 Q87SW5_nD2 3121.1.1 96-185 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002991985 Q87SW5_nD3 3121.1.1 186-260 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'Polypeptide transport-associated (POTRA) domain' 'a+b duplicates or obligate multimers' 002991986 Q87SW5_nD4 5084.5.1 261-570 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002991987 Q87S20_nD1 304.34.1 1-140 'Nucleoside diphosphate kinases' 'Nucleoside diphosphate kinases' 'Alpha-beta plaits' 'a+b two layers' 002991988 Q87H35_nD3 223.1.1 236-365 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991989 Q87H35_nD7 2007.1.3 726-873 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991990 Q87H35_nD4 605.1.1 366-440 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002991991 Q87H35_nD1 223.1.1 6-165 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002991992 Q87H35_nD6 2007.1.3 601-725 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991993 Q87H35_nD2 4168.1.1 166-220 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002991994 Q87H35_nD5 225.1.1 441-595 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002991995 Q87I15_nD1 213.1.1 6-120 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002991996 Q87GM1_nD1 304.14.1 36-125 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002991997 Q87N35_nD1 2007.1.19 6-230,306-380 'FabD/lysophospholipase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002991998 Q87S65_nD1 221.1.2 1-75 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002991999 Q87S65_nD2 304.102.1 76-315 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002992000 Q87PU7_nD1 283.2.1 46-154 'gpW/gp25-like' 'gpW/gp25-like' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002992001 Q87KY8_nD2 191.1.1 46-210 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002992002 Q87KY8_nD1 101.1.1 1-45 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992003 Q87N66_nD2 101.1.3 131-200 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002992004 Q87N66_nD1 2007.1.3 6-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992005 Q87MI2_nD1 2002.1.1 1-290 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992006 Q877N5_nD1 102.2.1 26-155 'H2TH' 'H2TH' 'HhH/H2TH' 'alpha arrays' 002992007 Q87QC2_nD1 4252.1.1 56-250 'AttH-like' 'AttH-like' 'AttH-like' 'beta barrels' 002992008 Q87QC2_nD2 4252.1.1 256-374 'AttH-like' 'AttH-like' 'AttH-like' 'beta barrels' 002992009 Q87NI6_nD1 213.1.1 36-190 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992010 Q87N49_nD1 2002.1.1 1-230 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992011 Q87GL8_nD1 109.61.1 6-45 'Uncharacterized protein PF2048.1' 'Uncharacterized protein PF2048.1' 'Repetitive alpha hairpins' 'alpha superhelices' 002992012 Q87NC5_nD1 3883.1.1 1-180 'CDP-alcohol phosphotransferase helical bundle domain' 'CDP-alcohol phosphotransferase helical bundle domain' 'CDP-alcohol phosphotransferase helical bundle domain' 'alpha bundles' 002992013 Q87LR3_nD4 309.1.2 551-700 'ThrRS/AlaRS editing domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002992014 Q87LR3_nD3 1.1.7 446-550 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992015 Q87LR3_nD1 314.1.1 1-255 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002992016 Q87LR3_nD6 5104.1.1 736-860 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'a+b three layers' 002992017 Q87LR3_nD5 5104.1.1 701-730 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'a+b three layers' 002992018 Q87LR3_nD2 613.1.1 256-445 'Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)' 'Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)' 'Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)' 'alpha complex topology' 002992019 Q87SF1_nD1 1075.4.1 36-75 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992020 Q87SF1_nD2 3478.1.1 201-225 'Histidine kinase receptor ArcB membrane domain' 'Histidine kinase receptor ArcB membrane domain' 'Histidine kinase receptor ArcB membrane domain' 'extended segments' 002992021 Q87SF1_nD3 4207.1.2 226-255 'MED7 hinge region' 'Mediator hinge subcomplex-like' 'Mediator hinge subcomplex-like' 'alpha duplicates or obligate multimers' 002992022 Q87I59_nD1 274.1.1 11-178 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002992023 Q87TD1_nD1 274.1.1 23-209 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002992024 Q87P02_nD1 7523.1.1 41-160 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992025 Q87P02_nD2 1075.1.1 6-35,171-380 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992026 Q87M50_nD1 180.1.1 11-365 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'alpha bundles' 002992027 Q87PY4_nD1 2003.6.1 1-283 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002992028 Q87ST7_nD1 11.1.1 6-120 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992029 Q87J50_nD1 5059.1.1 1-285 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002992030 Q87LA0_nD3 2004.1.1 1-130,251-285,401-940 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992031 Q87LA0_nD1 3325.1.1 131-250 'UvrB-binding domain of UvrA' 'UvrB-binding domain of UvrA' 'UvrB-binding domain of UvrA' 'a+b two layers' 002992032 Q87LA0_nD2 3326.1.1 286-400 'DNA-binding domain in UvrA' 'DNA-binding domain in UvrA' 'DNA-binding domain in UvrA' 'alpha arrays' 002992033 Q87JT0_nD1 5050.1.1 6-195 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992034 Q87JT0_nD2 5050.1.1 201-400 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992035 Q87S15_nD1 314.1.1 1-325 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002992036 Q87S15_nD2 7502.1.1 326-420 'Anticodon-binding domain of Class II aaRS' 'Anticodon-binding domain of Class II aaRS' 'Anticodon-binding domain of Class II aaRS' 'a/b three-layered sandwiches' 002992037 Q87MJ6_nD4 101.1.1 431-485 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992038 Q87MJ6_nD3 148.1.3 131-140,306-395 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992039 Q87MJ6_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992040 Q87MJ6_nD2 2004.1.1 141-305 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992041 Q87RQ0_nD3 1.1.1 226-415 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992042 Q87RQ0_nD7 221.15.1 796-855 'beta-grasp fold domain in leucine-tRNA ligase' 'beta-grasp fold domain in leucine-tRNA ligase' 'beta-Grasp' 'a+b two layers' 002992043 Q87RQ0_nD4 375.1.1 431-485 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992044 Q87RQ0_nD6 140.1.1 626-790 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002992045 Q87RQ0_nD1 375.1.1 151-190 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992046 Q87RQ0_nD2 2005.1.1 1-150,191-225,416-430,486-570,616-625 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002992047 Q87RQ0_nD5 375.14.1 571-615 'Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)' 'Rubredoxin-like domain in leucyl-tRNA synthetase (LS1)' 'Rubredoxin-like' 'few secondary structure elements' 002992048 Q87NG6_nD3 316.1.1 286-475 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002992049 Q87NG6_nD4 601.7.1 476-620 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002992050 Q87NG6_nD1 10.12.1 6-140 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002992051 Q87NG6_nD2 282.1.1 141-285 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002992052 Q87FG1_nD1 2007.2.1 1-45 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992053 Q87QC3_nD4 2498.1.1 401-455 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002992054 Q87QC3_nD3 1075.1.2 21-65,256-395 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992055 Q87QC3_nD7 1075.1.2 456-510,696-835 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992056 Q87QC3_nD5 1.1.2 551-650 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992057 Q87QC3_nD2 1.1.2 111-215 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992058 Q87QC3_nD1 304.128.1 66-110,216-255 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002992059 Q87QC3_nD6 304.128.1 511-550,656-695 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002992060 Q87PF9_nD1 107.1.1 16-205 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002992061 Q87JV8_nD1 2488.1.1 1-199 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002992062 Q87QS1_nD1 2006.1.4 11-175 'PIN domain-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992063 Q87QS1_nD2 101.1.2 176-249 'winged' 'HTH' 'HTH' 'alpha arrays' 002992064 Q87MB0_nD1 3921.1.1 6-195 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'alpha complex topology' 002992065 Q87L24_nD1 2004.1.1 1-289 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992066 Q87S70_nD1 7504.1.1 6-180 'ITPase-like' 'ITPase-like' 'ITPase-like' 'a/b three-layered sandwiches' 002992067 Q87PM3_nD2 603.2.1 31-50,221-340 'STAT' 'STAT' 'STAT-like' 'alpha bundles' 002992068 Q87PM3_nD1 7523.1.1 66-220 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992069 Q79YV9_nD1 192.7.1 26-103 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002992070 Q87H78_nD1 301.1.1 1-139 'L30e-like' 'L30e-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002992071 Q87RS1_nD1 2004.1.1 1-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992072 Q87RS1_nD2 304.8.1 246-344 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002992073 Q87MJ7_nD2 298.4.1 146-265 'V-type ATPase subunit E' 'V-type ATPase subunit E' 'FwdE/GAPDH domain-like' 'a+b two layers' 002992074 Q87MJ7_nD1 3464.1.1 66-140 'Helical region in V-type proton ATPase subunit E' 'Helical region in V-type proton ATPase subunit E' 'Helical region in V-type proton ATPase subunit E' 'extended segments' 002992075 Q87NG8_nD2 3016.1.1 351-414 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002992076 Q87NG8_nD1 7577.1.1 6-350 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002992077 Q87LJ7_nD1 2004.1.1 1-340 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992078 Q87SR1_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992079 Q87SR1_nD2 101.1.2 131-225 'winged' 'HTH' 'HTH' 'alpha arrays' 002992080 Q87SG0_nD2 301.6.1 201-325 'Tubulin C-terminal domain-like' 'Tubulin C-terminal domain-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002992081 Q87SG0_nD1 2003.1.6 1-200 'Tubulin nucleotide-binding domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992082 Q87LD8_nD1 322.1.1 1-85 'HPr-like' 'HPr-like' 'HPr-like' 'a+b two layers' 002992083 Q87RA4_nD1 3226.1.1 1-180 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002992084 Q87MD0_nD1 213.1.1 1-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992085 Q87SP3_nD2 7523.1.1 111-220 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992086 Q87SP3_nD1 7523.1.1 31-110,221-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992087 Q87NI0_nD1 192.1.1 16-65 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002992088 Q87IN6_nD1 213.1.1 16-25,71-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992089 Q87FG0_nD1 375.1.1 1-64 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992090 Q87SQ7_nD1 590.1.1 1-210 'Citrobacter dihydroxyacetone kinase extra ATP-binding domain' 'Citrobacter dihydroxyacetone kinase extra ATP-binding domain' 'Citrobacter dihydroxyacetone kinase extra ATP-binding domain' 'alpha bundles' 002992091 Q87IP0_nD2 4002.1.1 181-380 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha-helical domain in dehydroquinate synthase-like enzymes' 'alpha bundles' 002992092 Q87IP0_nD1 2007.1.7 6-180 'Rossmann-like domain in dehydroquinate synthase-like enzymes' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992093 Q87FC7_nD1 101.1.9 6-405 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002992094 Q87SU0_nD1 1002.1.1 11-155 'Fluoride ion channel' 'Fluoride ion channel' 'Fluoride ion channel' 'alpha complex topology' 002992095 Q87FG6_nD3 101.1.1 251-305 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992096 Q87FG6_nD2 101.1.1 196-250 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992097 Q87FG6_nD1 10.12.1 11-195 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002992098 Q87GB5_nD1 2004.1.1 1-235 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992099 Q87GB5_nD2 2.4.1 236-365 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002992100 Q87HK0_nD1 5050.1.1 6-235 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992101 Q87HK0_nD2 5050.1.1 236-460 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992102 Q87NZ4_nD1 2484.1.1 16-248 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992103 Q87FT8_nD1 304.4.1 1-95 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002992104 Q87FR4_nD1 5040.1.1 71-95 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'Cytochrome c oxidase subunit II-like, transmembrane region' 'extended segments' 002992105 Q87JE6_nD1 7561.1.1 1-215 'Isochorismatase-like hydrolases' 'Isochorismatase-like hydrolases' 'Isochorismatase-like hydrolases' 'a/b three-layered sandwiches' 002992106 Q87IR9_nD1 5038.1.1 31-545 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002992107 Q87G11_nD1 11.1.5 31-180 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992108 Q87Q95_nD1 10.1.2 1-240 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002992109 Q87Q95_nD2 304.48.1 241-435 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002992110 Q79YV7_nD1 223.1.1 6-115 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992111 Q79YV7_nD2 605.1.1 116-185 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002992112 Q79YV7_nD3 225.1.1 186-340 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002992113 Q87IA5_nD1 5050.1.1 6-185 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992114 Q87IA5_nD2 5050.1.1 196-410 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992115 Q87SH5_nD1 2008.1.1 11-120 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002992116 Q87L41_nD1 7545.1.1 1-118 'YchN-like' 'YchN-like' 'YchN-like' 'a/b three-layered sandwiches' 002992117 Q87TD5_nD2 5060.2.1 61-175 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002992118 Q87TD5_nD1 3115.6.1 1-45 'Bacterial RNA polymerase subunit epsilon' 'Bacterial RNA polymerase subunit epsilon' 'GP2-like' 'a+b two layers' 002992119 Q87TD5_nD3 3285.1.1 176-235,386-400 'Alix V domain' 'Alix V domain' 'Alix V domain' 'alpha duplicates or obligate multimers' 002992120 Q87TD5_nD4 5060.2.1 241-385 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002992121 Q87S26_nD1 80.1.1 1-105 'HesB-like domain' 'HesB-like domain' 'HesB-like domain' 'beta complex topology' 002992122 Q87S11_nD2 309.1.2 121-290 'ThrRS/AlaRS editing domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002992123 Q87S11_nD1 1.1.7 1-120 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992124 Q87RA1_nD1 7558.1.1 1-255 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002992125 Q87NW1_nD1 5084.5.1 31-235,256-375 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992126 Q87I27_nD1 2004.1.1 21-203 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992127 Q87JF7_nD1 2002.1.1 1-345 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992128 Q87JJ9_nD1 206.1.1 1-270 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992129 Q87LF8_nD2 2003.1.14 16-30,136-305 'Aspartate/ornithine carbamoyltransferase' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992130 Q87LF8_nD1 2003.1.14 1-135 'Aspartate/ornithine carbamoyltransferase' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992131 Q87N63_nD1 205.1.1 46-245 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002992132 Q87HS9_nD1 2002.3.1 6-245 'Glycoside hydrolase/deacetylase' 'Glycoside hydrolase/deacetylase' 'TIM beta/alpha-barrel' 'a/b barrels' 002992133 Q87IC3_nD1 7515.1.1 31-165,186-508 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002992134 Q87QP2_nD1 2004.1.1 6-165 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992135 Q87QP2_nD2 148.1.3 166-255 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992136 Q87QP2_nD3 138.1.1 256-449 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'alpha arrays' 002992137 Q87PN4_nD1 7512.1.1 1-170,356-375 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002992138 Q87PN4_nD2 7512.1.1 171-355 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002992139 Q87HP2_nD2 2003.1.4 276-458 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992140 Q87HP2_nD1 3892.1.1 6-270 'Transhydrogeanse domain II' 'Transhydrogeanse domain II' 'Transhydrogeanse domain II' 'alpha bundles' 002992141 Q87QA3_nD2 3016.1.1 301-364 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002992142 Q87QA3_nD1 7577.1.1 6-300 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002992143 Q87TH1_nD1 3473.1.1 6-45 'Twin-arginine transport (Tat) system component TatA' 'Twin-arginine transport (Tat) system component TatA' 'Twin-arginine transport (Tat) system component TatA' 'extended segments' 002992144 Q87HV1_nD2 805.1.1 366-580 '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' 'a+b complex topology' 002992145 Q87HV1_nD1 246.2.1 11-365 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002992146 Q87FX1_nD1 3186.1.1 216-325 'C-terminal domain of FliK' 'C-terminal domain of FliK' 'C-terminal domain of FliK' 'a+b two layers' 002992147 Q87GF2_nD1 150.5.1 21-50 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002992148 Q87GF2_nD2 142.1.1 56-185,211-225 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002992149 Q87TD7_nD4 327.16.1 261-345 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992150 Q87TD7_nD3 327.16.1 186-260 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992151 Q87TD7_nD5 327.16.1 346-675 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992152 Q87TD7_nD2 327.16.1 111-185 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992153 Q87TD7_nD1 3070.1.1 26-105 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002992154 Q87N59_nD2 107.1.1 206-345 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002992155 Q87N59_nD1 107.1.1 41-205 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002992156 P22097_nD2 2003.4.1 201-390 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002992157 P22097_nD1 2003.4.1 6-200 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002992158 Q87FY4_nD1 327.16.1 71-130 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992159 Q87FY4_nD2 327.13.1 136-255 'Ring-building motif I in type III secretion system' 'Ring-building motif I in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992160 Q87FY4_nD4 6055.1.1 451-475 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002992161 Q87FY4_nD3 327.13.1 256-310,361-435 'Ring-building motif I in type III secretion system' 'Ring-building motif I in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992162 Q87G55_nD5 3291.1.1 356-455 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002992163 Q87G55_nD2 601.4.1 51-190 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002992164 Q87G55_nD1 5043.2.1 1-45,191-215 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002992165 Q87G55_nD4 UNASSIGNED 271-355,456-540 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992166 Q87G55_nD3 4168.1.1 216-270 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002992167 Q87KW5_nD2 228.1.1 86-200 'Fe,Mn superoxide dismutase (SOD)-C' 'Fe,Mn superoxide dismutase (SOD)-C' 'Fe,Mn superoxide dismutase (SOD)-C' 'a+b three layers' 002992168 Q87KW5_nD1 192.3.1 1-85 'Fe,Mn superoxide dismutase (SOD), N-terminal domain' 'Fe,Mn superoxide dismutase (SOD), N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002992169 Q87PL1_nD2 3223.1.1 41-65 'Amiloride-sensitive cation channel 2' 'Amiloride-sensitive cation channel 2' 'Amiloride-sensitive cation channel 2' 'beta sandwiches' 002992170 Q87PL1_nD1 3390.1.1 6-35 'Photosystem II reaction center protein T, PsbT' 'Photosystem II reaction center protein T, PsbT' 'Photosystem II reaction center protein T, PsbT' 'extended segments' 002992171 Q87T28_nD1 181.1.1 16-90 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G proteins-like' 'alpha bundles' 002992172 Q87I96_nD3 225.1.1 246-420 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002992173 Q87I96_nD4 2007.1.3 426-555 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992174 Q87I96_nD2 605.1.1 151-255 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002992175 Q87I96_nD5 2007.1.3 561-680 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992176 Q87I96_nD1 633.22.1 6-140 'Vitamin K epoxide reductase (VKOR)' 'Vitamin K epoxide reductase (VKOR)' 'Bromodomain-like' 'alpha bundles' 002992177 Q87S38_nD1 1.1.5 27-340 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992178 Q87L51_nD4 2003.1.1 451-600,786-800 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992179 Q87L51_nD3 304.8.1 381-445 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002992180 Q87L51_nD1 7531.1.1 6-290 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002992181 Q87L51_nD5 298.1.1 601-785 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002992182 Q87L51_nD2 304.8.1 306-380 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002992183 Q87MQ1_nD1 7573.1.1 6-180 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002992184 Q87K62_nD3 2008.1.1 186-285 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002992185 Q87K62_nD1 101.1.9 6-70 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002992186 Q87K62_nD2 101.1.9 76-155 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002992187 Q87TA7_nD1 272.1.1 121-205 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'a+b two layers' 002992188 Q87K80_nD1 71.1.1 26-250 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002992189 Q87JP6_nD2 5086.1.1 91-150 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002992190 Q87JP6_nD1 101.1.4 6-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002992191 Q87JP6_nD3 304.48.1 151-335 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002992192 Q87QJ3_nD1 101.1.2 1-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002992193 Q03473_nD1 601.51.1 6-284 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002992194 Q87FR0_nD4 12.1.1 651-755 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002992195 Q87FR0_nD3 2002.1.1 251-650 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992196 Q87FR0_nD1 11.1.1 36-135 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992197 Q87FR0_nD2 11.1.1 136-250 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992198 Q87KQ6_nD1 601.31.1 6-163 'Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ' 'Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ' 'Four-helical up-and-down bundle' 'alpha bundles' 002992199 Q87NP8_nD1 4312.1.1 6-90 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002992200 Q87NH6_nD3 5086.1.1 301-360,431-480 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002992201 Q87NH6_nD4 3291.1.1 361-430 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002992202 Q87NH6_nD1 223.1.1 6-200 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992203 Q87NH6_nD2 4168.1.1 201-255 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002992204 Q87NH6_nD5 632.22.1 256-300,481-540 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002992205 Q87RL7_nD2 3009.1.1 171-195 'Insertion subdomain in DsbA-like' 'Insertion subdomain in DsbA-like' 'Insertion subdomain in DsbA-like' 'alpha arrays' 002992206 Q87RL7_nD1 295.1.1 21-155 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain-like' 'a+b two layers' 002992207 Q87TC5_nD1 221.4.1 6-180 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002992208 Q87RZ8_nD1 7579.1.1 1-255 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002992209 Q87RZ8_nD2 1140.1.1 256-375 'Traversal protein CelTOS' 'Traversal protein CelTOS' 'Traversal protein CelTOS' 'alpha duplicates or obligate multimers' 002992210 Q87QK6_nD1 2002.1.1 1-255 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992211 Q87PT9_nD1 11.1.4 31-155 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992212 Q87MN9_nD2 298.1.1 131-315 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002992213 Q87MN9_nD1 2003.1.1 6-130,316-335 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992214 Q87HF9_nD3 7523.1.1 161-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992215 Q87HF9_nD2 7523.1.1 81-160,266-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992216 Q87HF9_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002992217 Q87K34_nD1 247.1.1 26-288 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002992218 Q87I86_nD1 70.3.1 41-110 'SET domain-like' 'SET domain-like' 'beta-clip' 'beta barrels' 002992219 Q87I86_nD2 1.1.7 111-225 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992220 Q87RN4_nD4 330.3.1 291-355 'Peptidyl-tRNA hydrolase domain-like' 'Peptidyl-tRNA hydrolase domain-like' 'dsRBD-like' 'a+b two layers' 002992221 Q87RN4_nD3 330.3.1 216-290 'Peptidyl-tRNA hydrolase domain-like' 'Peptidyl-tRNA hydrolase domain-like' 'dsRBD-like' 'a+b two layers' 002992222 Q87RN4_nD1 4006.1.1 6-105 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'alpha bundles' 002992223 Q87RN4_nD2 304.116.1 106-210 'Ferredoxin-like domain in release factor' 'Ferredoxin-like domain in release factor' 'Alpha-beta plaits' 'a+b two layers' 002992224 Q87RU1_nD1 514.1.1 6-165 'YutG-like' 'YutG-like' 'YutG-like' 'alpha bundles' 002992225 Q87N02_nD1 635.1.1 6-170 'YgfB-like' 'YgfB-like' 'YgfB-like' 'alpha arrays' 002992226 Q87JS7_nD1 247.1.1 1-253 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002992227 Q87G45_nD3 2007.1.6 166-260 'Aminoacid dehydrogenase-like, N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992228 Q87G45_nD1 101.1.9 6-75 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002992229 Q87G45_nD2 4995.1.1 81-165 'Methionine synthase domain-like' 'Methionine synthase domain-like' 'Methionine synthase domain-like' 'alpha arrays' 002992230 Q87QA7_nD1 5084.2.1 26-180 'OMPT-like' 'OMPT-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002992231 Q87PW4_nD1 11.1.4 16-235,256-300 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992232 Q87PW4_nD2 11.1.1 236-255,301-435 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992233 Q87R32_nD1 11.1.1 21-125 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992234 Q87JE0_nD1 2003.1.5 6-255 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992235 Q87FI9_nD2 101.1.1 91-160 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992236 Q87FI9_nD1 142.1.1 1-90 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002992237 Q87IW1_nD1 10.12.1 11-160 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002992238 Q87IW1_nD2 101.1.1 161-215 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992239 Q87IW1_nD3 101.1.1 216-265 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992240 Q87RW1_nD2 7523.1.1 106-245 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992241 Q87RW1_nD1 7523.1.1 31-120,246-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992242 Q87RW1_nD3 235.1.1 286-470 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002992243 Q87PZ1_nD2 325.1.7 41-75,151-185 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992244 Q87PZ1_nD1 6002.1.1 1-30 'Protein P16' 'Protein P16' 'Protein P16' 'few secondary structure elements' 002992245 Q87PZ1_nD4 1.1.7 186-285 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992246 Q87PZ1_nD3 3922.1.1 76-150 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002992247 Q87JU5_nD1 3758.2.1 11-180 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002992248 Q87HM0_nD4 1.1.7 56-70,216-290 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992249 Q87HM0_nD3 3922.1.1 106-180 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002992250 Q87HM0_nD1 1.1.16 6-30 'Mammalian cell entry (MCE) domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992251 Q87HM0_nD5 1.1.7 46-55,291-350 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992252 Q87HM0_nD2 325.1.7 71-105,181-215 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992253 Q87JX4_nD1 213.1.1 1-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992254 Q87T42_nD1 7011.1.1 26-400 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002992255 Q87MV1_nD2 7515.1.1 241-600 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002992256 Q87MV1_nD1 1151.1.1 11-210 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'alpha bundles' 002992257 Q87IJ9_nD1 2.1.1 6-80 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992258 Q87IJ9_nD2 2.1.1 81-175 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992259 Q87IJ9_nD4 2.1.1 561-650 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992260 Q87IJ9_nD3 2.9.1 176-560 'RNB domain-like' 'RNB domain-like' 'OB-fold' 'beta barrels' 002992261 Q87L38_nD2 284.1.1 116-255 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002992262 Q87L38_nD1 3405.1.1 51-115 'FkpA dimerization domain-like' 'FkpA dimerization domain-like' 'FkpA dimerization domain-like' 'alpha duplicates or obligate multimers' 002992263 Q87I13_nD1 2484.1.1 11-214 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992264 P74956_nD3 212.1.1 591-695 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002992265 P74956_nD4 3010.1.1 696-780 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'C-terminal subdomain in Lon-related proteases catalytic domains' 'a/b three-layered sandwiches' 002992266 P74956_nD1 1.1.9 6-490 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992267 P74956_nD2 148.1.3 491-585 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992268 Q87H08_nD1 2005.1.1 1-175 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002992269 Q87H08_nD2 2003.1.4 176-308 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992270 Q87RX6_nD1 2007.1.4 1-125,271-294 'Phosphofructokinase N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992271 Q87RX6_nD2 4004.1.1 126-270 'NAD kinase beta sandwich domain-like' 'NAD kinase beta sandwich domain-like' 'NAD kinase beta sandwich domain-like' 'beta sandwiches' 002992272 Q87S40_nD1 2002.1.1 6-435 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992273 Q87TL7_nD2 209.1.1 236-334 'C-type lectin-like' 'C-type lectin-like' 'C-type lectin-like' 'a+b complex topology' 002992274 Q87TL7_nD1 304.14.1 41-145 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002992275 Q87P14_nD1 223.1.1 11-185 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992276 Q87P14_nD2 223.1.1 186-260 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992277 Q87P14_nD5 101.1.1 541-585 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992278 Q87P14_nD3 2004.1.1 266-450 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992279 Q87P14_nD4 148.1.3 451-540 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992280 Q87QL7_nD1 2003.6.1 1-430 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002992281 Q87MS2_nD3 223.1.1 221-320 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992282 Q87MS2_nD4 3757.1.1 321-345 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002992283 Q87MS2_nD2 223.1.1 31-220 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992284 Q87MS2_nD5 4168.1.1 346-405 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002992285 Q87MS2_nD6 UNASSIGNED 406-670 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992286 Q87MS2_nD1 223.1.1 1-30 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992287 Q87TB2_nD1 2488.1.1 1-225 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002992288 Q87PJ7_nD1 2004.1.1 1-525 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992289 Q87FF7_nD1 304.9.1 1-79 'RNA-binding domain, RBD' 'RNA-binding domain, RBD' 'Alpha-beta plaits' 'a+b two layers' 002992290 Q87L91_nD4 296.1.1 431-578 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'a+b three layers' 002992291 Q87L91_nD3 304.37.1 351-430 'Sulfite reductase, domains 1 and 3' 'Sulfite reductase, domains 1 and 3' 'Alpha-beta plaits' 'a+b two layers' 002992292 Q87L91_nD2 296.1.1 156-350 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'a+b three layers' 002992293 Q87L91_nD1 304.37.1 11-155 'Sulfite reductase, domains 1 and 3' 'Sulfite reductase, domains 1 and 3' 'Alpha-beta plaits' 'a+b two layers' 002992294 Q87H41_nD1 101.1.9 1-125 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002992295 Q87H68_nD1 3978.1.1 21-270 'Integral membrane Acyl-CoA desaturase' 'Integral membrane Acyl-CoA desaturase' 'Integral membrane Acyl-CoA desaturase' 'alpha complex topology' 002992296 Q87KE3_nD1 867.1.1 6-70,91-305 'Coproporphyrinogen III oxidase' 'Coproporphyrinogen III oxidase' 'Coproporphyrinogen III oxidase' 'a+b three layers' 002992297 Q87II3_nD1 2486.1.1 6-260 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002992298 Q87SS8_nD2 7510.1.1 106-265 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002992299 Q87SS8_nD1 7510.1.1 6-105,266-363 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002992300 Q87TA4_nD1 3939.1.1 31-100 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002992301 Q87TA4_nD2 4177.1.1 101-260 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002992302 Q87TA4_nD3 3758.2.1 261-450 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002992303 Q87H72_nD1 3705.1.1 51-125 'Bacterial chaperone lipoprotein (PulS_OutS)' 'Bacterial chaperone lipoprotein (PulS_OutS)' 'Bacterial chaperone lipoprotein (PulS_OutS)' 'alpha arrays' 002992304 Q87PR9_nD2 2004.1.1 321-575 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992305 Q87PR9_nD1 1075.4.1 1-320 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992306 Q87MZ0_nD1 2485.1.1 1-160 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002992307 Q87MZ0_nD2 109.1.1 161-310 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002992308 Q87J07_nD3 1.1.2 146-225 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992309 Q87J07_nD1 3860.1.1 21-100 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002992310 Q87J07_nD2 150.5.1 101-130,231-244 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002992311 Q87QI7_nD3 1.1.2 661-815 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992312 Q87QI7_nD2 2003.2.1 36-180,406-660 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002992313 Q87QI7_nD1 2003.2.1 181-400 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002992314 Q87PD1_nD1 101.1.4 1-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002992315 Q87MT2_nD1 2006.1.3 1-155 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992316 Q87MT2_nD2 264.2.1 221-290,421-490 'Prokaryotic type I DNA topoisomerase beta-barrel domain' 'Prokaryotic type I DNA topoisomerase beta-barrel domain' 'LigT-like' 'beta barrels' 002992317 Q87MT2_nD4 101.1.2 156-215,491-620 'winged' 'HTH' 'HTH' 'alpha arrays' 002992318 Q87MT2_nD3 101.1.2 291-420 'winged' 'HTH' 'HTH' 'alpha arrays' 002992319 Q87PG5_nD1 1079.1.1 1-220 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002992320 Q87PZ9_nD1 11.9.1 1-340 'FAH' 'FAH' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992321 Q87KR6_nD2 101.1.8 166-320 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002992322 Q87KR6_nD1 186.1.1 6-165 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002992323 Q87KR6_nD3 101.1.8 321-390 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002992324 Q87FU5_nD2 1203.1.1 91-165 'Drosophila SD2' 'Shroom domain 2' 'Shroom domain 2' 'alpha bundles' 002992325 Q87FU5_nD1 5014.1.1 6-40 'iron-sulfur subunit (ISP) transmembrane anchor' 'iron-sulfur subunit (ISP) transmembrane anchor' 'iron-sulfur subunit (ISP) transmembrane anchor' 'extended segments' 002992326 Q87FU5_nD4 5054.1.1 356-380 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992327 Q87FU5_nD3 5054.1.1 41-90,166-355 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992328 Q79YW2_nD3 160.1.1 361-439 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002992329 Q79YW2_nD2 2004.1.1 91-360 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992330 Q79YW2_nD1 1.1.7 21-90 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992331 Q87PD4_nD1 605.1.1 6-100 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002992332 Q87R98_nD2 2003.1.5 96-360 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992333 Q87R98_nD1 101.1.2 6-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002992334 Q87R92_nD1 5054.1.1 16-355 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992335 Q87R92_nD2 5054.1.1 356-450 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992336 Q87QK4_nD2 243.1.1 26-130 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002992337 Q87QK4_nD1 4236.1.1 1-25 'Sec-C motif' 'Sec-C motif' 'Sec-C motif' 'few secondary structure elements' 002992338 Q87TH4_nD1 2003.1.5 16-259 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992339 Q79YX0_nD2 5041.1.1 16-65,91-115,141-220 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002992340 Q79YX0_nD1 1075.1.1 66-90 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992341 Q79YX0_nD3 1073.1.1 116-140 'Mitochondrial calcium uniporter (MCU)' 'Mitochondrial calcium uniporter (MCU)' 'Mitochondrial calcium uniporter (MCU)' 'alpha arrays' 002992342 Q79YX0_nD4 4104.1.1 241-350 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'beta sandwiches' 002992343 Q87NR0_nD1 109.4.1 1-220 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992344 Q87FC8_nD3 3433.1.1 281-324 'Plasmid-encoded ParB dimerization domain' 'ParB dimerization domain' 'ParB dimerization domain' 'a+b duplicates or obligate multimers' 002992345 Q87FC8_nD2 101.1.1 151-270 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992346 Q87FC8_nD1 876.1.1 51-150 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'ParB/Sulfiredoxin' 'a+b complex topology' 002992347 Q87KT0_nD3 2492.1.1 396-530 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002992348 Q87KT0_nD1 7543.1.1 6-195 'Methylglyoxal synthase-like' 'Methylglyoxal synthase-like' 'Methylglyoxal synthase-like' 'a/b three-layered sandwiches' 002992349 Q87KT0_nD2 2492.1.1 216-395 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002992350 Q87RM2_nD1 5084.5.1 1-230 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992351 Q87MU5_nD3 101.1.8 266-320 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002992352 Q87MU5_nD1 186.1.1 11-110 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002992353 Q87MU5_nD2 101.1.8 111-265 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002992354 Q87M21_nD1 3415.1.1 1-75,96-425 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002992355 Q87HF7_nD3 2006.1.6 181-230,316-470 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992356 Q87HF7_nD2 UNASSIGNED 256-295 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992357 Q87HF7_nD1 159.1.2 6-165 'MazG-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002992358 Q87QU9_nD1 3755.3.1 1-40,61-120 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002992359 Q87ID4_nD1 220.1.1 1-100 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002992360 Q87ID4_nD2 109.4.1 101-165 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992361 Q87ID4_nD3 2004.1.1 166-685 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992362 Q87TK0_nD1 2003.1.5 6-279 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992363 Q87FT6_nD1 3012.1.1 6-155 'Cof C2 cap domain' 'Cof C2 cap domain' 'Cof C2 cap domain' 'a+b two layers' 002992364 Q87FT6_nD2 101.1.1 161-210 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992365 Q87FT6_nD5 11.1.1 381-478 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992366 Q87FT6_nD3 101.1.1 211-260 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992367 Q87FT6_nD4 11.1.1 261-375 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992368 Q87SY4_nD2 2004.1.1 216-375 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992369 Q87SY4_nD1 2004.1.1 6-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992370 Q87SY4_nD3 304.9.1 376-459 'RNA-binding domain, RBD' 'RNA-binding domain, RBD' 'Alpha-beta plaits' 'a+b two layers' 002992371 Q87Q63_nD1 71.1.1 26-260 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002992372 Q87Q50_nD1 3236.2.1 6-120 'Sodium-dependent citrate symporter' 'Sodium-dependent citrate symporter' 'Cation-proton antiporter' 'alpha complex topology' 002992373 Q87HC3_nD1 11.1.4 26-150 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992374 Q87R30_nD1 206.1.1 11-285 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992375 Q87LC1_nD1 2484.1.1 6-140 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992376 Q87LC1_nD2 2484.1.1 141-345 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992377 Q87KF7_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002992378 Q87KF7_nD2 7523.1.1 91-180,281-310 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992379 Q87KF7_nD3 7523.1.1 181-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992380 Q87N21_nD1 2007.1.19 1-125,196-305 'FabD/lysophospholipase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992381 Q87N21_nD2 304.11.1 126-195 'Probable ACP-binding domain of malonyl-CoA ACP transacylase' 'Probable ACP-binding domain of malonyl-CoA ACP transacylase' 'Alpha-beta plaits' 'a+b two layers' 002992382 Q87LN0_nD1 220.1.1 11-20,66-140 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002992383 Q87G36_nD1 604.12.1 1-175 'MIT domain' 'MIT domain' 'Spectrin repeat-like' 'alpha bundles' 002992384 Q87H14_nD1 5065.1.1 6-285 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002992385 Q87LX5_nD1 2004.1.1 6-265,286-330 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992386 Q87QM8_nD1 2003.1.2 1-425 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992387 Q87J49_nD3 101.1.1 211-260 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992388 Q87J49_nD1 10.12.1 16-150 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002992389 Q87J49_nD2 101.1.1 156-210 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992390 Q87LJ0_nD1 2002.1.1 1-310 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992391 Q87LJ0_nD2 101.19.1 311-385 'C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN' 'C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN' 'HTH' 'alpha arrays' 002992392 Q87P59_nD3 148.1.3 386-430 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992393 Q87P59_nD4 4055.1.1 431-605 'a+b domain in virulence-associated V antigen' 'a+b domain in virulence-associated V antigen' 'a+b domain in virulence-associated V antigen' 'a+b complex topology' 002992394 Q87P59_nD1 159.1.2 26-130 'MazG-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002992395 Q87P59_nD2 UNASSIGNED 131-385 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992396 Q87LT2_nD1 377.1.1 6-50 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002992397 Q87M92_nD1 223.1.1 6-135 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992398 Q87M92_nD2 304.48.1 141-300 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002992399 Q87J08_nD1 2007.1.19 16-549 'FabD/lysophospholipase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992400 Q87HW1_nD1 2004.1.1 6-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992401 Q87HW1_nD2 2004.1.1 211-390 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992402 Q87JJ2_nD1 2007.1.14 38-80 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992403 Q87J52_nD2 11.1.4 266-390 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992404 Q87J52_nD1 11.1.4 76-119,141-265 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992405 Q87H43_nD1 7524.1.1 1-250,471-490 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002992406 Q87H43_nD2 7524.1.1 251-470 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002992407 Q87P60_nD1 109.4.1 1-155 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992408 Q87S17_nD2 10.1.2 236-315 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002992409 Q87S17_nD1 101.1.4 6-90 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002992410 Q87MR2_nD1 379.1.1 17-45,78-95 'Kazal-type serine protease inhibitors' 'Kazal-type serine protease inhibitors' 'Kazal-type serine protease inhibitors-like' 'few secondary structure elements' 002992411 Q87QK7_nD1 2002.1.1 1-240 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992412 Q87KM8_nD1 814.1.1 6-175 'Chorismate lyase' 'Chorismate lyase' 'Chorismate lyase' 'a+b two layers' 002992413 Q87HL1_nD1 2006.1.6 16-170 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992414 Q87HL1_nD2 11.1.1 176-280 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992415 Q87HL1_nD3 11.1.1 281-405 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992416 Q87QG0_nD1 4017.1.1 1-25 'Fe-binding domain in prismane-like proteins' 'Fe-binding domain in prismane-like proteins' 'Fe-binding domain in prismane-like proteins' 'few secondary structure elements' 002992417 Q87QG0_nD2 4044.1.1 26-135 'Helical bundle domain in prismane-like proteins' 'Helical bundle domain in prismane-like proteins' 'Helical bundle domain in prismane-like proteins' 'alpha bundles' 002992418 Q87QG0_nD5 7586.1.1 371-553 'Rossmann-like domain in prismane-like proteins' 'Rossmann-like domain in prismane-like proteins' 'Rossmann-like domain in prismane-like proteins' 'a/b three-layered sandwiches' 002992419 Q87QG0_nD3 4044.1.1 136-230 'Helical bundle domain in prismane-like proteins' 'Helical bundle domain in prismane-like proteins' 'Helical bundle domain in prismane-like proteins' 'alpha bundles' 002992420 Q87QG0_nD4 7586.1.1 231-370 'Rossmann-like domain in prismane-like proteins' 'Rossmann-like domain in prismane-like proteins' 'Rossmann-like domain in prismane-like proteins' 'a/b three-layered sandwiches' 002992421 Q87KQ1_nD2 898.1.1 6-65,156-230 'a+b domain in Ribosomal protein L1' 'a+b domain in Ribosomal protein L1' 'a+b domain in Ribosomal protein L1' 'a+b two layers' 002992422 Q87KQ1_nD1 2007.25.1 66-155 'Rossmann-like domain in Ribosomal protein L1' 'Rossmann-like domain in Ribosomal protein L1' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992423 Q87SZ6_nD1 330.1.1 1-75 'dsRNA-binding domain-like' 'dsRNA-binding domain-like' 'dsRBD-like' 'a+b two layers' 002992424 Q87SZ6_nD2 212.1.1 81-165 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002992425 Q87SL5_nD1 2484.1.1 1-125 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992426 Q87SL5_nD2 2484.1.1 126-335 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992427 Q87FF2_nD3 101.1.1 211-270 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992428 Q87FF2_nD2 101.1.1 156-210 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992429 Q87FF2_nD1 10.12.1 11-155 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002992430 Q87H07_nD3 327.5.1 541-670 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992431 Q87H07_nD2 323.1.1 281-540 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002992432 Q87H07_nD1 7584.1.1 6-300 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002992433 Q87HU6_nD1 5084.5.4 26-413 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992434 Q87IC7_nD1 7515.1.1 26-490 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002992435 Q87JZ9_nD1 4.7.1 6-80 'RNase P subunit p29' 'RNase P subunit p29' 'SH3' 'beta barrels' 002992436 Q87JN8_nD1 375.1.1 6-75 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992437 Q87L04_nD2 2011.1.1 156-405 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002992438 Q87L04_nD5 101.15.1 526-570 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002992439 Q87L04_nD1 319.3.1 26-145 'B2 domain of PilQ' 'B2 domain of PilQ' 'HSP20-like' 'beta sandwiches' 002992440 Q87L04_nD3 101.15.1 406-470 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002992441 Q87L04_nD4 101.15.1 471-520 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002992442 Q87T51_nD1 5084.1.1 41-188 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002992443 Q87RZ6_nD1 65.1.1 36-100,551-565 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'beta sandwiches' 002992444 Q87RZ6_nD2 2002.1.1 101-580 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992445 Q87HU2_nD2 304.136.1 151-250 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002992446 Q87HU2_nD1 101.1.2 6-110 'winged' 'HTH' 'HTH' 'alpha arrays' 002992447 Q87HU2_nD3 7523.1.1 121-150,251-330,531-560 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992448 Q87HU2_nD4 7523.1.1 331-530 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992449 Q87KJ5_nD1 223.1.1 46-225 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992450 Q87KN4_nD1 1075.5.1 6-230 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992451 Q87KN4_nD2 1075.5.1 246-445 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992452 Q87RX3_nD1 2484.1.1 1-180 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992453 Q87RX3_nD2 2484.1.1 181-385 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992454 Q87RX3_nD4 632.7.1 526-610 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002992455 Q87RX3_nD3 511.1.1 386-505 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'beta sandwiches' 002992456 Q87MF3_nD1 2486.1.1 6-315 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002992457 Q87M17_nD1 213.1.1 1-150 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992458 Q87T83_nD1 1151.1.1 11-190 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A' 'alpha bundles' 002992459 Q87T83_nD2 7515.1.1 191-505 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'Alkaline phosphatase-like' 'a/b three-layered sandwiches' 002992460 Q79YW8_nD1 5043.1.1 6-89 'Htr2 transmembrane domain-like' 'Htr2 transmembrane domain-like' 'Sensor proteins transmembrane domains' 'extended segments' 002992461 Q87MA8_nD1 3518.1.1 11-260 'putative RnfG subunit of electron transport complex' 'putative RnfG subunit of electron transport complex' 'putative RnfG subunit of electron transport complex' 'a+b two layers' 002992462 Q87N54_nD1 604.39.1 36-180 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002992463 Q87N54_nD2 3227.1.1 181-205 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002992464 Q87I04_nD1 325.1.7 6-125 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992465 Q87TA0_nD1 1075.3.1 1-30,71-335 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992466 Q87G97_nD2 3227.1.1 176-510 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002992467 Q87G97_nD1 311.1.1 1-150 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002992468 Q87G97_nD3 2007.2.2 516-620 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992469 Q87SR3_nD2 2007.6.1 246-610 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992470 Q87SR3_nD1 210.1.3 1-245 'Class II glutamine amidotransferases' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002992471 Q87HP7_nD1 7523.1.1 6-45 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992472 Q87MH5_nD1 2007.2.1 1-185 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992473 Q87TE2_nD1 6055.1.1 6-50 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002992474 Q87TE2_nD2 7026.1.1 51-250 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'beta meanders' 002992475 Q87TE2_nD4 5084.8.1 346-615 'Usher PapC translocation pore' 'Usher PapC translocation pore' 'Outer membrane meander beta-barrels' 'beta barrels' 002992476 Q87TE2_nD3 79.1.1 251-345 'Phage tail fiber protein trimerization domain' 'Phage tail fiber protein trimerization domain' 'Phage tail fiber protein trimerization domain' 'beta duplicates or obligate multimers' 002992477 Q87N99_nD2 7523.1.1 91-165,266-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992478 Q87N99_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002992479 Q87N99_nD3 7523.1.1 166-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992480 Q87RS4_nD1 304.4.1 1-95 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002992481 Q87RS4_nD2 314.1.1 96-255 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002992482 Q87LF1_nD1 243.1.1 26-205 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002992483 Q87G61_nD2 11.1.1 126-265 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992484 Q87G61_nD1 11.1.1 26-120 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992485 Q87G61_nD4 601.16.1 461-535 'FAT domain of focal adhesion kinase' 'FAT domain of focal adhesion kinase' 'Four-helical up-and-down bundle' 'alpha bundles' 002992486 Q87G61_nD3 11.1.1 266-390 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992487 Q87PH5_nD1 1075.3.1 6-250 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992488 Q87QL6_nD2 560.1.1 96-135 'H-NS histone-like proteins, C-terminal domain' 'H-NS histone-like proteins, C-terminal domain' 'H-NS histone-like proteins, C-terminal domain' 'few secondary structure elements' 002992489 Q87QL6_nD1 559.1.1 6-80 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'alpha duplicates or obligate multimers' 002992490 Q87G29_nD1 206.1.1 6-330 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992491 Q87HA2_nD1 184.1.1 1-70 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'alpha arrays' 002992492 Q87HA2_nD2 7544.1.1 71-315 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'a/b three-layered sandwiches' 002992493 Q87Q90_nD1 5084.4.1 31-269 'Outer membrane phospholipase A (OMPLA)' 'Outer membrane phospholipase A (OMPLA)' 'Outer membrane meander beta-barrels' 'beta barrels' 002992494 Q87TN0_nD3 1.1.7 56-65,201-275 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992495 Q87TN0_nD4 1.1.7 41-55,276-355 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992496 Q87TN0_nD1 325.1.7 66-105,161-200 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992497 Q87TN0_nD2 5086.1.1 106-160 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002992498 Q79YT7_nD2 11.1.1 171-255 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992499 Q79YT7_nD1 11.1.1 31-170 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992500 Q87RT4_nD1 7579.1.1 1-205 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002992501 Q87L93_nD1 101.1.1 6-45 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992502 Q87IN9_nD1 2007.1.1 1-215 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992503 Q87SJ4_nD1 7579.1.1 6-194 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002992504 Q87S10_nD1 375.2.1 1-30 'YfgJ-like' 'YfgJ-like' 'Rubredoxin-like' 'few secondary structure elements' 002992505 Q87S10_nD2 375.2.1 31-70 'YfgJ-like' 'YfgJ-like' 'Rubredoxin-like' 'few secondary structure elements' 002992506 Q87R66_nD1 218.1.1 1-100 'Enolase N-terminal domain-like' 'Enolase N-terminal domain-like' 'Enolase-N/ribosomal protein' 'a+b two layers' 002992507 Q87R66_nD2 2002.1.1 101-329 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992508 Q87QE4_nD2 592.2.1 36-85 'YugE-like' 'YugE-like' 'PWI domain-like' 'alpha arrays' 002992509 Q87QE4_nD1 3864.1.1 6-35 'Mitochondrial 54S ribosomal protein L28' 'Mitochondrial 54S ribosomal protein L28' 'Mitochondrial 54S ribosomal protein L28' 'extended segments' 002992510 Q87P92_nD1 101.1.1 1-105 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992511 Q87TN5_nD2 7523.1.1 81-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992512 Q87TN5_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002992513 Q87G40_nD1 109.4.1 6-494 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992514 Q87GC6_nD1 101.1.4 6-68 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002992515 Q87JM2_nD1 304.7.1 36-120 'Protease propeptides/inhibitors' 'Protease propeptides/inhibitors' 'Alpha-beta plaits' 'a+b two layers' 002992516 Q87JM2_nD2 2499.1.1 126-335,481-565 'Subtilisin-like' 'Subtilisin-like' 'Subtilisin-like' 'a/b three-layered sandwiches' 002992517 Q87JM2_nD3 2487.1.1 336-480 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002992518 Q87JM2_nD4 10.1.2 566-675 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002992519 Q87LI2_nD1 7524.1.1 6-250,441-470 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002992520 Q87LI2_nD2 7524.1.1 251-455 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002992521 Q87KC4_nD1 206.1.1 6-335 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992522 Q87I98_nD1 213.1.1 1-180 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992523 Q87L70_nD1 2003.1.5 6-270 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992524 Q87R49_nD1 222.1.1 6-110 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002992525 Q87R49_nD2 222.1.1 111-285 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002992526 Q87FM2_nD1 3070.2.1 46-170 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002992527 Q87FM2_nD2 5084.5.3 171-678 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992528 Q87MD7_nD1 283.1.1 6-290 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002992529 Q87IV2_nD1 2004.1.1 1-244 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992530 Q87P75_nD1 213.1.1 1-160 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992531 Q87T13_nD1 1.1.7 1-209 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992532 Q87MK1_nD3 2004.1.1 266-480 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992533 Q87MK1_nD2 181.1.1 181-265 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G proteins-like' 'alpha bundles' 002992534 Q87MK1_nD1 2485.3.1 1-30 'Major capsid protein gp5' 'Major capsid protein gp5' 'Thioredoxin-like' 'a+b three layers' 002992535 Q87IJ7_nD1 174.1.1 1-90 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'few secondary structure elements' 002992536 Q87IJ7_nD2 304.48.1 106-265 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002992537 Q87IJ7_nD3 2002.5.1 271-533 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002992538 Q87GU3_nD1 821.1.1 6-95 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'GIY-YIG endonuclease' 'a+b three layers' 002992539 Q87RQ3_nD1 316.1.1 1-105 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002992540 Q87GZ4_nD1 2003.1.9 6-249 'Activating enzymes of the ubiquitin-like proteins' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992541 Q87TA5_nD1 3758.2.1 1-170 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002992542 Q87QB8_nD2 3236.2.1 1-205,381-560 'Sodium-dependent citrate symporter' 'Sodium-dependent citrate symporter' 'Cation-proton antiporter' 'alpha complex topology' 002992543 Q87QB8_nD1 4261.1.1 216-290 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002992544 Q87QB8_nD3 4261.1.1 296-375 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002992545 Q87KN5_nD2 2003.1.2 151-270 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992546 Q87KN5_nD1 2003.1.2 6-150,271-345 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992547 Q87KN5_nD3 244.2.1 346-465 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002992548 Q87NS9_nD1 2.1.1 6-75 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992549 Q87HQ0_nD2 7523.1.1 91-160,246-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992550 Q87HQ0_nD1 101.1.2 6-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002992551 Q87HQ0_nD3 7523.1.1 161-245 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992552 Q87MY5_nD3 7523.1.1 306-530 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992553 Q87MY5_nD1 304.136.1 91-205 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002992554 Q87MY5_nD2 7523.1.1 51-90,206-305,531-555 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992555 Q87TG9_nD1 3563.1.1 16-240 'Twin arginine protein translocation system component TatC' 'Twin arginine protein translocation system component TatC' 'Twin arginine protein translocation system component TatC' 'alpha bundles' 002992556 Q87G94_nD3 101.1.1 231-275 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992557 Q87G94_nD2 101.1.1 166-230 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992558 Q87G94_nD1 10.12.1 1-165 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002992559 Q87SH9_nD1 109.1.1 1-205 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002992560 Q87PS4_nD1 223.1.1 6-155 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992561 Q87PS4_nD2 131.1.1 156-365 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002992562 Q87MM8_nD2 2003.1.5 96-305 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992563 Q87MM8_nD1 6056.1.1 6-95 'SP1917-like' 'SP1917-like' 'SP1917-like' 'alpha arrays' 002992564 Q87FM5_nD1 5065.1.1 16-345 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002992565 Q87LH5_nD1 2007.2.2 1-100 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992566 Q87JW8_nD1 2002.1.1 1-204 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992567 Q87JR0_nD2 7523.1.1 121-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992568 Q87JR0_nD1 7523.1.1 26-120,261-330 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992569 Q87TK9_nD1 5059.1.1 6-105 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002992570 Q87N17_nD1 4051.1.1 6-135 'a+b domain in Capz' 'a+b domain in Capz' 'a+b domain in Capz' 'a+b two layers' 002992571 Q9X9J3_nD1 150.5.1 11-105 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002992572 Q9X9J3_nD2 235.1.1 156-308 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002992573 Q79YV0_nD1 3747.1.1 1-80,101-144 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002992574 Q87J04_nD1 241.1.1 1-145 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002992575 Q87QZ8_nD1 1075.3.1 11-240 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992576 Q87T72_nD1 7577.1.1 1-315 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002992577 Q87T72_nD2 3016.1.1 316-385 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002992578 Q87QW6_nD2 2005.2.1 1-10,51-250 'YdcF' 'YdcF' 'HUP domain-like' 'a/b three-layered sandwiches' 002992579 Q87QW6_nD1 192.5.1 11-50 'HR1 repeat' 'HR1 repeat' 'Long alpha-hairpin' 'alpha bundles' 002992580 Q87JV7_nD2 616.1.1 81-174 'S15/NS1 RNA-binding domain' 'S15/NS1 RNA-binding domain' 'S15/NS1 RNA-binding domain' 'alpha arrays' 002992581 Q87JV7_nD1 148.1.1 6-80 'Histone' 'Histone-related' 'Histone-like' 'alpha arrays' 002992582 Q87R52_nD2 2003.4.1 166-355 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002992583 Q87R52_nD1 2003.4.1 6-160 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002992584 Q87GA8_nD1 7011.1.1 11-255,276-289,316-390 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002992585 Q87R42_nD2 2003.1.2 86-285,481-539 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992586 Q87R42_nD1 304.9.1 1-85 'RNA-binding domain, RBD' 'RNA-binding domain, RBD' 'Alpha-beta plaits' 'a+b two layers' 002992587 Q87R42_nD3 244.1.1 286-480 'FAD-linked reductases-C' 'FAD-linked reductases-C' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002992588 Q87HS3_nD3 7523.1.1 166-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992589 Q87HS3_nD2 7523.1.1 86-165,266-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992590 Q87HS3_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002992591 Q87H46_nD1 2486.1.1 6-360 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002992592 Q87NH3_nD3 3016.1.1 381-463 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002992593 Q87NH3_nD1 101.1.2 1-65 'winged' 'HTH' 'HTH' 'alpha arrays' 002992594 Q87NH3_nD2 7577.1.1 71-380 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002992595 Q87KV3_nD1 109.3.1 6-120 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992596 Q87FN4_nD1 11.1.1 6-115 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992597 Q87FN4_nD2 2002.1.1 116-550 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992598 Q87FN4_nD3 12.1.1 556-663 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002992599 Q87NQ6_nD1 2007.9.1 36-190 'Toll/Interleukin receptor TIR domain' 'Toll/Interleukin receptor TIR domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992600 Q87NQ6_nD2 241.2.1 221-355 'Frataxin-like' 'Frataxin-like' 'Type III secretory system chaperone-like' 'a+b two layers' 002992601 Q87SS4_nD1 180.1.1 6-180 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'alpha bundles' 002992602 Q87KG9_nD1 5059.1.1 6-300 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002992603 Q87LI3_nD3 5086.1.1 266-540 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002992604 Q87LI3_nD1 3488.1.1 6-205 'Putative sensor histidine kinase domain' 'Putative sensor histidine kinase domain' 'Putative sensor histidine kinase domain' 'a+b three layers' 002992605 Q87LI3_nD2 4168.1.1 206-265 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002992606 Q87LD3_nD1 304.102.1 6-238 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002992607 Q87QA4_nD1 5084.5.1 6-415 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992608 Q87NW5_nD1 7523.1.1 26-115,241-300 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992609 Q87NW5_nD2 7523.1.1 116-240 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992610 Q87T07_nD1 327.11.1 6-105 'Prokaryotic type KH domain (KH-domain type II)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992611 Q87T07_nD2 230.2.1 106-215 'Ribosomal protein S3-C' 'Ribosomal protein S3-C' 'T-fold' 'a+b two layers' 002992612 Q87SM9_nD1 378.1.1 1-90 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002992613 Q87IA9_nD1 2006.1.1 26-325 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992614 Q87G15_nD1 62.1.1 22-235 'Carbonic anhydrase' 'Carbonic anhydrase' 'Carbonic anhydrase' 'beta meanders' 002992615 Q87G87_nD2 5054.1.1 136-230 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992616 Q87G87_nD1 5054.1.1 16-135 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992617 Q87G87_nD3 5054.1.1 231-355 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992618 Q87G87_nD4 5054.1.1 356-450 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992619 Q87QT8_nD1 301.3.1 56-174 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002992620 Q87PM1_nD1 206.1.1 21-288 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992621 Q87RF1_nD1 221.1.1 1-105 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002992622 Q87RF1_nD2 187.1.1 106-235 'alpha-helical ferredoxin' 'alpha-helical ferredoxin' 'alpha-helical ferredoxin-like' 'alpha arrays' 002992623 Q87QE9_nD1 2007.2.5 31-185 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992624 Q87QE9_nD2 2007.2.5 186-320 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992625 Q87PX2_nD3 4.1.1 331-403 'SH3' 'SH3' 'SH3' 'beta barrels' 002992626 Q87PX2_nD1 275.1.1 6-65 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002992627 Q87PX2_nD2 131.1.1 101-330 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002992628 Q87JX0_nD2 2003.2.1 176-400 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002992629 Q87JX0_nD1 1001.1.1 41-85 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'a+b two layers' 002992630 Q87JX0_nD4 1.1.2 661-810 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992631 Q87JX0_nD3 2003.2.1 86-175,401-660 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002992632 Q87KH5_nD1 2004.1.1 6-230 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992633 Q87KH5_nD2 2004.1.1 231-400 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992634 Q87P35_nD1 108.1.1 11-110 'EF-hand' 'EF-hand-related' 'EF-hand' 'alpha arrays' 002992635 Q87P35_nD2 219.1.1 131-325 'Cysteine proteinases' 'Cysteine proteinases' 'Cysteine proteinases-like' 'a+b complex topology' 002992636 Q87SN1_nD1 3440.1.1 6-45 'Interferon alpha-inducible protein 27-like protein 1' 'Interferon alpha-inducible protein 27-like protein 1' 'Interferon alpha-inducible protein 27-like protein 1' 'extended segments' 002992637 Q87T38_nD2 206.1.3 116-320 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992638 Q87T38_nD1 2003.1.10 1-115 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992639 Q87QF1_nD1 2007.1.5 1-105 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992640 Q87QF1_nD2 2007.1.5 106-255 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992641 Q87N24_nD1 4020.1.1 1-110 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b two layers' 002992642 Q87N24_nD2 4045.1.1 111-270 'barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'barrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes' 'a+b two layers' 002992643 Q87JH9_nD1 601.51.1 6-299 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002992644 Q87GM2_nD1 2485.1.1 1-155 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002992645 Q87LB9_nD1 274.1.1 41-144 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002992646 Q87TI1_nD1 601.19.1 31-60 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002992647 Q87RI6_nD1 2003.1.1 1-270 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992648 Q87PY7_nD1 2004.1.1 11-268 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992649 Q87QX8_nD1 3135.1.1 6-80 'Uncharacterized protein yciN' 'Uncharacterized protein yciN' 'Uncharacterized protein yciN' 'a+b two layers' 002992650 Q87MM6_nD1 7525.1.1 1-154 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'a/b three-layered sandwiches' 002992651 Q87MB6_nD1 192.1.1 31-100 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002992652 Q87MB6_nD2 284.1.1 101-185 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002992653 Q87NJ5_nD3 2487.2.1 306-490 'FumA C-terminal domain-like' 'FumA C-terminal domain-like' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002992654 Q87NJ5_nD1 2485.4.1 1-150,281-300 'Fumarate hydratase N-terminal domain' 'Fumarate hydratase N-terminal domain' 'Thioredoxin-like' 'a+b three layers' 002992655 Q87NJ5_nD2 2485.4.1 151-280,491-500 'Fumarate hydratase N-terminal domain' 'Fumarate hydratase N-terminal domain' 'Thioredoxin-like' 'a+b three layers' 002992656 Q87IC9_nD2 268.1.1 206-263,291-770 'Sterol carrier protein, SCP-related' 'Sterol carrier protein, SCP-related' 'Sterol carrier protein-like' 'a+b two layers' 002992657 Q87IC9_nD1 107.1.1 16-74,101-135,166-205 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002992658 Q87GJ8_nD1 2004.1.1 11-150 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992659 Q87K78_nD3 225.1.1 201-340 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002992660 Q87K78_nD1 4953.1.1 6-145 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002992661 Q87K78_nD2 605.1.1 151-200 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002992662 Q87GU4_nD1 2007.1.2 26-180,311-340 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992663 Q87GU4_nD2 2007.1.2 181-310,341-360 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992664 Q87MQ6_nD1 5051.1.1 21-440 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002992665 Q87LR4_nD3 304.8.1 321-390 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002992666 Q87LR4_nD2 304.120.1 256-320 'Ferredoxin-like domain in ThiI' 'Ferredoxin-like domain in ThiI' 'Alpha-beta plaits' 'a+b two layers' 002992667 Q87LR4_nD1 7531.1.1 1-255 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002992668 Q87SH6_nD1 2007.6.1 6-190 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992669 Q87SJ0_nD2 7.1.1 266-360 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002992670 Q87SJ0_nD1 1.1.5 21-265 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992671 Q87SJ0_nD3 7.1.1 361-455 'PDZ domain' 'PDZ domain' 'PDZ domain' 'beta barrels' 002992672 Q87K51_nD1 7516.1.1 6-35 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002992673 Q87RJ4_nD3 102.1.1 406-585 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002992674 Q87RJ4_nD4 7568.1.1 596-670 'BRCT domain' 'BRCT domain' 'BRCT domain' 'a/b three-layered sandwiches' 002992675 Q87RJ4_nD2 2.1.1 316-405 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992676 Q87RJ4_nD1 206.1.3 6-315 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992677 Q87MC7_nD1 3355.1.1 21-525 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002992678 Q87LK3_nD1 378.1.1 21-225 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002992679 Q87T77_nD1 7516.1.1 1-250 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002992680 Q87HI8_nD2 1075.5.1 11-20,241-455 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992681 Q87HI8_nD1 1075.5.1 21-240 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992682 Q79YV6_nD1 601.13.1 1-130 'Flagellar export chaperone FliS' 'Flagellar export chaperone FliS' 'Four-helical up-and-down bundle' 'alpha bundles' 002992683 Q87TL0_nD3 7523.1.1 171-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992684 Q87TL0_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002992685 Q87TL0_nD2 7523.1.1 91-170,276-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992686 Q87QP5_nD2 304.4.1 66-160 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002992687 Q87QP5_nD1 101.1.2 1-65 'winged' 'HTH' 'HTH' 'alpha arrays' 002992688 Q87RP4_nD1 2007.1.3 1-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992689 Q87RP4_nD2 2002.1.1 146-380,441-450 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992690 Q87RP4_nD3 2.1.1 381-440 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992691 Q87H01_nD1 101.1.4 1-65 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002992692 Q87H01_nD2 148.1.1 71-130 'Histone' 'Histone-related' 'Histone-like' 'alpha arrays' 002992693 Q87G32_nD1 205.1.1 11-40,111-123,176-275 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002992694 Q87J65_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002992695 Q87J65_nD2 7523.1.1 91-303 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002992696 Q87LH2_nD3 109.4.1 161-195,281-415 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992697 Q87LH2_nD1 1189.1.1 6-160 'VSG (variant surface glycoprotein) N-terminal domain' 'VSG (variant surface glycoprotein) N-terminal domain' 'VSG (variant surface glycoprotein) N-terminal domain' 'a+b complex topology' 002992698 Q87LH2_nD2 325.1.3 201-280 'Pyrimidine nucleoside phosphorylase C-terminal domain' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992699 Q87TP3_nD1 3758.2.1 31-55 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002992700 Q87QX7_nD8 375.1.1 756-815 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992701 Q87QX7_nD5 375.1.1 596-640 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992702 Q87QX7_nD2 101.1.2 286-410 'winged' 'HTH' 'HTH' 'alpha arrays' 002992703 Q87QX7_nD6 375.1.1 641-705 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992704 Q87QX7_nD9 375.1.1 816-870 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992705 Q87QX7_nD7 375.1.1 711-750 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002992706 Q87QX7_nD1 2006.1.3 1-165 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992707 Q87QX7_nD4 101.1.2 166-220,481-595 'winged' 'HTH' 'HTH' 'alpha arrays' 002992708 Q87QX7_nD3 264.2.1 221-285,411-480 'Prokaryotic type I DNA topoisomerase beta-barrel domain' 'Prokaryotic type I DNA topoisomerase beta-barrel domain' 'LigT-like' 'beta barrels' 002992709 Q87QF7_nD1 2.1.1 41-55,111-159 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992710 Q87HN4_nD1 2004.1.1 1-225 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992711 Q87HN4_nD2 2.4.1 231-360 'MOP-like' 'MOP-like' 'OB-fold' 'beta barrels' 002992712 Q87GP6_nD1 186.1.1 16-145 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002992713 Q87GP6_nD2 101.1.8 151-219,256-445 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002992714 Q87GP6_nD5 210.1.2 766-875 'Penicillin acylase, catalytic domain' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002992715 Q87GP6_nD3 101.1.8 476-535 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002992716 Q87GP6_nD4 192.5.1 561-775 'HR1 repeat' 'HR1 repeat' 'Long alpha-hairpin' 'alpha bundles' 002992717 Q87K59_nD1 331.1.1 6-80 'TATA-box binding protein-like' 'TATA-box binding protein-like' 'TBP-like' 'a+b two layers' 002992718 Q87GX0_nD2 101.1.3 141-205 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002992719 Q87GX0_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992720 Q87HU5_nD1 2498.1.1 26-255 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002992721 Q87M00_nD1 327.4.1 1-80 'YhbC-like, N-terminal domain' 'YhbC-like, N-terminal domain' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002992722 Q87M00_nD2 4.1.1 86-150 'SH3' 'SH3' 'SH3' 'beta barrels' 002992723 Q87IM1_nD1 2003.4.1 1-210 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002992724 Q87IM1_nD2 2003.4.1 211-400 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002992725 Q87K47_nD1 3355.1.1 6-255,276-420 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002992726 Q87KB6_nD2 2007.1.20 421-610 'Dehydratase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992727 Q87KB6_nD1 4303.1.1 6-165,186-420 'lvD/EDD N-terminal domain-like' 'lvD/EDD N-terminal domain-like' 'lvD/EDD N-terminal domain-like' 'alpha arrays' 002992728 Q79YY8_nD1 3747.1.1 1-70,396-435 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002992729 Q79YY8_nD2 4167.1.1 71-150,321-395 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'beta complex topology' 002992730 Q79YY8_nD3 4998.1.1 156-320 'Flagellar hook protein flgE D2 domain' 'Flagellar hook protein flgE D2 domain' 'Flagellar hook protein flgE D2 domain-like' 'beta sandwiches' 002992731 Q87I54_nD1 5038.2.1 1-128 'MAPEG domain-like' 'MAPEG domain-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002992732 Q87HH9_nD1 66.1.1 6-109 'ISP domain' 'ISP domain' 'ISP domain' 'beta sandwiches' 002992733 Q87NX7_nD1 5051.1.1 6-445 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002992734 Q87G38_nD2 604.1.1 86-115 'Spectrin repeat' 'Spectrin repeat' 'Spectrin repeat-like' 'alpha bundles' 002992735 Q87G38_nD1 3559.1.1 1-75 'Mediator of RNA polymerase II transcription subunit 22' 'Mediator of RNA polymerase II transcription subunit 22' 'Mediator of RNA polymerase II transcription subunit 22' 'a+b complex topology' 002992736 Q87JV0_nD2 101.1.2 136-220 'winged' 'HTH' 'HTH' 'alpha arrays' 002992737 Q87JV0_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992738 Q87TP1_nD1 236.1.1 1-120,296-325 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002992739 Q87TP1_nD2 2003.1.1 121-295 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992740 Q87G06_nD1 11.1.3 16-170 'Cu,Zn superoxide dismutase-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992741 Q87TL9_nD1 1075.3.1 26-310 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992742 Q87PD6_nD1 129.1.1 46-125 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002992743 Q87PD6_nD2 604.13.1 126-150 'USP8 N-terminal domain-like' 'USP8 N-terminal domain-like' 'Spectrin repeat-like' 'alpha bundles' 002992744 Q87MP5_nD1 150.1.1 6-140 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002992745 Q87LW3_nD1 109.4.1 21-160 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992746 Q87LW3_nD5 7542.1.1 681-865 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002992747 Q87LW3_nD2 2487.1.1 161-370 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002992748 Q87LW3_nD4 7542.1.2 531-680 'Aconitase iron-sulfur domain II' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002992749 Q87LW3_nD3 7542.1.1 371-530 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'Aconitase iron-sulfur domain' 'a/b three-layered sandwiches' 002992750 Q87FI4_nD1 2003.1.1 6-170 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992751 Q87FI4_nD2 279.1.1 171-435 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'a+b complex topology' 002992752 Q87JE5_nD1 221.4.1 1-185 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002992753 Q87JE5_nD2 101.1.2 186-235 'winged' 'HTH' 'HTH' 'alpha arrays' 002992754 Q87TK6_nD1 2004.1.1 1-170 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992755 Q87SP6_nD1 2002.5.1 6-240 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002992756 Q87NX0_nD1 103.4.1 56-80 'Elongation factor TFIIS domain 2/ Kix domain of creb binding protein' 'Elongation factor TFIIS domain 2/ Kix domain of creb binding protein' 'RuvA-C' 'alpha arrays' 002992757 Q87T50_nD3 221.1.4 276-360 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002992758 Q87T50_nD7 221.8.1 781-889 'GfcC' 'GfcC' 'beta-Grasp' 'a+b two layers' 002992759 Q87T50_nD4 221.1.4 361-450,521-540 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002992760 Q87T50_nD2 221.1.4 191-275 'Nqo1 middle domain-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002992761 Q87T50_nD5 221.1.1 451-460,541-640 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002992762 Q87T50_nD1 6016.1.1 121-190 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'Domain 1 of outer membrane lipoprotein Wza' 'a+b two layers' 002992763 Q87T50_nD6 221.8.1 646-780 'GfcC' 'GfcC' 'beta-Grasp' 'a+b two layers' 002992764 Q87HS0_nD1 206.1.3 6-329 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002992765 Q56702_nD2 3019.1.1 176-275 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002992766 Q56702_nD1 601.51.1 1-175,276-378 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002992767 Q87QK2_nD1 2002.5.1 1-190 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002992768 Q87QK2_nD2 131.1.1 191-400 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002992769 Q87FF9_nD1 213.1.1 6-175 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992770 Q87RU5_nD2 7580.1.1 206-369 'RibA-like' 'RibA-like' 'RibA-like' 'a/b three-layered sandwiches' 002992771 Q87RU5_nD1 297.1.1 1-205 'YrdC/RibB' 'YrdC/RibB' 'YrdC/RibB' 'a+b complex topology' 002992772 Q87RQ5_nD4 223.3.1 256-555,576-625 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002992773 Q87RQ5_nD3 3702.1.1 51-85,166-255,486-500 'Penicillin binding protein dimerisation domain' 'Penicillin binding protein dimerisation domain' 'Penicillin binding protein dimerisation domain' 'beta complex topology' 002992774 Q87RQ5_nD2 308.2.1 86-165 'Penicillin binding protein ClpS-like domain' 'Penicillin binding protein ClpS-like domain' 'ClpS-like' 'a+b two layers' 002992775 Q87RQ5_nD1 243.1.1 16-50 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002992776 Q87HN9_nD1 3927.1.1 6-85 'Late competence protein ComFB' 'Late competence protein ComFB' 'Late competence protein ComFB' 'few secondary structure elements' 002992777 Q87FY9_nD1 1.1.5 36-284 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992778 Q87HC9_nD1 109.51.1 6-260 'TssA helical domains' 'TssA helical domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002992779 Q87HC9_nD2 109.51.1 301-370 'TssA helical domains' 'TssA helical domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002992780 Q87QE0_nD1 213.1.1 1-170 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992781 Q87PG7_nD2 2005.1.1 151-310 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002992782 Q87PG7_nD1 2005.1.1 1-150 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002992783 Q87HM9_nD2 9.1.1 56-204 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002992784 Q87HM9_nD1 601.13.1 6-45 'Flagellar export chaperone FliS' 'Flagellar export chaperone FliS' 'Four-helical up-and-down bundle' 'alpha bundles' 002992785 Q87H29_nD1 101.1.2 1-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002992786 Q87H29_nD2 7577.1.1 86-400 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002992787 Q87H29_nD3 3016.1.1 386-470 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002992788 Q79YV2_nD1 579.1.1 56-90 'Anti-sigma factor FlgM' 'Anti-sigma factor FlgM' 'Anti-sigma factor FlgM' 'extended segments' 002992789 Q87HA1_nD1 7550.1.1 41-165 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'a/b three-layered sandwiches' 002992790 Q87HA1_nD2 1137.1.1 166-290 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain-like' 'a+b two layers' 002992791 Q87JW0_nD3 3053.1.1 226-460 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'beta barrels' 002992792 Q87JW0_nD2 512.1.1 96-220 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b two layers' 002992793 Q87JW0_nD1 512.1.1 1-95 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b two layers' 002992794 Q87NY0_nD1 601.16.1 16-130 'FAT domain of focal adhesion kinase' 'FAT domain of focal adhesion kinase' 'Four-helical up-and-down bundle' 'alpha bundles' 002992795 Q87FK6_nD2 2007.1.2 141-285,316-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992796 Q87FK6_nD1 2007.1.2 31-140,286-315 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992797 Q87S56_nD1 3435.1.1 1-300 'Recombination-associated protein rdgC' 'Recombination-associated protein rdgC' 'Recombination-associated protein rdgC' 'a+b two layers' 002992798 Q87IY4_nD1 5084.5.4 21-365 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992799 Q87SQ0_nD2 213.1.1 281-575 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992800 Q87SQ0_nD1 7558.1.1 11-270 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002992801 Q87Q40_nD1 2011.1.1 6-260 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002992802 Q87Q40_nD2 325.2.1 261-340 'Succinylglutamate desuccinylase / Aspartoacylase C-terminal domain' 'Succinylglutamate desuccinylase / Aspartoacylase C-terminal domain' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992803 Q87RW8_nD2 274.1.1 36-208 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002992804 Q87RW8_nD1 274.1.1 11-35 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002992805 Q87N47_nD1 633.23.1 1-25 'Claudin' 'Claudin' 'Bromodomain-like' 'alpha bundles' 002992806 Q87N47_nD2 3877.1.2 41-85 'DUF106' 'Membrane protein insertase YidC-related' 'Membrane protein insertase YidC-related' 'alpha bundles' 002992807 Q87TM2_nD1 2004.1.1 1-265,556-565 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992808 Q87TM2_nD2 2004.1.1 271-555 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992809 Q87TE3_nD1 213.1.1 1-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002992810 Q87TE3_nD2 222.1.1 156-305 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002992811 Q87I52_nD1 246.2.1 66-90 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002992812 Q87I52_nD2 246.3.1 43-65,91-230,261-465 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002992813 Q87FG2_nD1 101.1.2 6-60 'winged' 'HTH' 'HTH' 'alpha arrays' 002992814 Q87FG2_nD2 304.4.1 61-150 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002992815 Q87IU9_nD1 101.1.4 6-105 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002992816 Q87J78_nD1 2004.1.1 6-418 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992817 Q87H93_nD1 304.7.1 41-145 'Protease propeptides/inhibitors' 'Protease propeptides/inhibitors' 'Alpha-beta plaits' 'a+b two layers' 002992818 Q87N79_nD1 1.1.2 101-230 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992819 Q87N79_nD2 304.128.1 56-100,231-280 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002992820 Q87N79_nD3 1075.1.2 6-55,281-425 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992821 Q87IR2_nD1 141.1.1 6-295 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002992822 Q87HY4_nD1 2004.1.1 1-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992823 Q87I62_nD1 601.3.1 26-134 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002992824 Q87J90_nD4 5067.1.1 1-40,331-505 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002992825 Q87J90_nD3 304.28.1 136-185,276-330 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002992826 Q87J90_nD1 304.28.1 41-135 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002992827 Q87J90_nD7 304.28.1 656-700,791-840 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002992828 Q87J90_nD8 5067.1.1 506-545,841-1005 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002992829 Q87J90_nD5 304.28.1 546-655 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002992830 Q87J90_nD2 304.28.2 186-270 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002992831 Q87J90_nD6 304.28.2 701-730,751-785 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002992832 Q87HH7_nD1 192.1.1 6-45 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002992833 Q87HH7_nD2 284.1.1 46-130 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002992834 Q87G73_nD2 2004.1.1 316-565 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992835 Q87G73_nD1 1075.4.1 11-310 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002992836 Q87QN4_nD1 2003.1.5 6-268 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992837 Q87NE8_nD1 3719.1.1 36-425 'Imelysin peptidase-like' 'Imelysin peptidase-like' 'Imelysin peptidase-like' 'alpha bundles' 002992838 Q87IL1_nD1 2004.1.1 1-484 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992839 Q87HA0_nD4 1.1.2 621-760 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992840 Q87HA0_nD3 2003.2.1 101-175,376-590,611-620 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002992841 Q87HA0_nD5 244.2.1 761-855 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002992842 Q87HA0_nD2 2003.2.1 176-375 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002992843 Q87HA0_nD6 101.32.1 861-915 'bacterioferritin-associated ferredoxin' 'bacterioferritin-associated ferredoxin' 'HTH' 'alpha arrays' 002992844 Q87HA0_nD1 1001.1.1 51-100 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'a+b two layers' 002992845 Q87IB6_nD3 11.1.1 301-335 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992846 Q87IB6_nD4 601.7.1 341-415 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002992847 Q87IB6_nD1 11.1.1 36-180 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992848 Q87IB6_nD2 11.1.1 186-300 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992849 Q87FK3_nD3 1.1.7 326-495 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992850 Q87FK3_nD2 2007.1.11 176-325 'L-fucose isomerase, N-terminal and second domains' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992851 Q87FK3_nD1 2007.1.11 6-175 'L-fucose isomerase, N-terminal and second domains' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992852 Q87HX3_nD1 7516.1.1 1-290 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002992853 Q87HX3_nD2 208.1.1 291-400 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002992854 Q87SI0_nD1 107.1.1 26-240 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002992855 Q87MM5_nD3 309.1.1 471-705 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002992856 Q87MM5_nD4 309.1.1 706-925 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002992857 Q87MM5_nD1 309.1.1 6-235 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002992858 Q87MM5_nD2 309.1.1 236-470 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002992859 Q87ML3_nD1 5069.1.1 1-165 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002992860 Q87ML3_nD2 5069.1.1 166-390 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002992861 Q87ML3_nD3 3843.1.1 391-515,616-645 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'alpha complex topology' 002992862 Q87ML3_nD4 5090.1.1 516-615 'Viral glycoprotein, central and dimerisation domains' 'Viral glycoprotein, central and dimerisation domains' 'Viral glycoprotein, central and dimerisation domains-like' 'beta complex topology' 002992863 Q87GV3_nD1 604.5.1 21-175 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002992864 Q87R89_nD1 5076.2.1 6-255 'Putative sulfate permease CysZ' 'Putative sulfate permease CysZ' 'Mitochondrial ADP/ATP carrier-like' 'alpha complex topology' 002992865 Q87HB5_nD1 5027.1.1 36-75 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'extended segments' 002992866 Q87GC9_nD2 304.158.1 391-635 'CRISPR system Cas5 homologs' 'CRISPR system Cas5 homologs' 'Alpha-beta plaits' 'a+b two layers' 002992867 Q87GC9_nD1 3576.2.1 36-375 'Cas8f/Csy1' 'Cas8f/Csy1' 'Cas8-like' 'a+b complex topology' 002992868 Q87HL4_nD2 2003.1.2 41-60,116-265 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992869 Q87HL4_nD1 2003.1.2 1-40,61-115,266-345 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992870 Q87HL4_nD4 2007.2.5 466-565 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992871 Q87HL4_nD3 244.2.1 346-465 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002992872 Q87RT2_nD2 4143.1.1 71-175 'THUMP domain-like' 'THUMP domain-like' 'THUMP domain-like' 'a+b two layers' 002992873 Q87RT2_nD1 304.120.1 1-70 'Ferredoxin-like domain in ThiI' 'Ferredoxin-like domain in ThiI' 'Alpha-beta plaits' 'a+b two layers' 002992874 Q87RT2_nD3 2003.1.5 176-355 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992875 Q87R02_nD1 UNASSIGNED 46-70 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992876 Q87R02_nD2 11.1.4 166-250 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992877 Q87R02_nD4 11.1.4 251-340,466-475 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992878 Q87R02_nD3 11.1.4 36-45,71-155,341-485 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002992879 Q87RE6_nD1 5065.1.1 1-255 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002992880 Q87FL7_nD1 2002.1.1 31-285 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992881 Q87FL7_nD2 1.1.7 11-30,286-400 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992882 Q87G26_nD1 1.1.5 26-135 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992883 Q87G26_nD2 1.1.5 136-240 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002992884 Q87LR7_nD1 2002.1.1 1-295 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992885 Q87LR7_nD2 103.5.1 296-405 'post-HMGL domain-like' 'post-HMGL domain-like' 'RuvA-C' 'alpha arrays' 002992886 Q87LR7_nD5 325.1.7 511-595 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002992887 Q87LR7_nD3 103.5.1 406-455 'post-HMGL domain-like' 'post-HMGL domain-like' 'RuvA-C' 'alpha arrays' 002992888 Q87LR7_nD4 2002.1.1 476-505 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992889 Q87I83_nD1 2007.1.3 21-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992890 Q87I83_nD2 2004.1.1 136-395 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992891 Q87N39_nD3 3584.1.1 526-740 'DNA polymerase III finger domain' 'DNA polymerase III finger domain' 'DNA polymerase III finger domain' 'alpha arrays' 002992892 Q87N39_nD4 102.1.1 741-905 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002992893 Q87N39_nD1 2002.1.1 1-250 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992894 Q87N39_nD2 316.1.1 251-525 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002992895 Q87N39_nD5 2.1.1 906-1010 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002992896 Q87K17_nD1 7579.1.1 6-300 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002992897 Q87LF6_nD1 301.7.1 1-129 'YjgF-like' 'YjgF-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002992898 Q87QV4_nD1 2003.1.5 6-245 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992899 Q87FE7_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992900 Q87FE7_nD2 2004.1.1 141-275 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992901 Q87FE7_nD3 148.1.3 276-355 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992902 Q87FE7_nD4 101.1.1 356-400 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992903 Q87RU3_nD1 195.1.1 6-150 'NusB-like' 'NusB-like' 'NusB-like' 'alpha complex topology' 002992904 Q87M67_nD1 810.1.1 1-180 'BtrG-like (Pfam 03674)' 'BtrG-like (Pfam 03674)' 'BtrG-like (Pfam 03674)' 'a+b two layers' 002992905 Q87Q35_nD2 5050.1.1 201-400 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992906 Q87Q35_nD1 5050.1.1 6-200 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002992907 Q87IE8_nD1 5065.1.1 6-310 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002992908 Q87MH6_nD1 2485.1.1 1-115 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002992909 Q87LJ3_nD1 306.4.1 1-95 'YggU-like' 'YggU-like' 'Glucose permease domain IIB-like' 'a+b two layers' 002992910 Q87MD6_nD3 131.2.1 331-610 'Poly A polymerase C-terminal region-like' 'Poly A polymerase C-terminal region-like' 'PDEase-like' 'alpha complex topology' 002992911 Q87MD6_nD4 109.4.1 616-685 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992912 Q87MD6_nD2 601.7.1 171-325 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002992913 Q87MD6_nD5 304.8.1 671-795 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002992914 Q87MD6_nD1 316.1.1 1-170 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002992915 Q87MD6_nD6 304.8.1 796-874 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002992916 Q87QZ5_nD1 246.3.1 1-268 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002992917 Q87S80_nD2 2484.1.1 161-320 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992918 Q87S80_nD1 2484.1.1 6-160,321-370 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992919 Q87NZ7_nD2 3016.1.1 311-415 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002992920 Q87NZ7_nD1 7577.1.1 6-310 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002992921 Q87FV9_nD1 2002.1.1 1-195 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002992922 Q87Q76_nD3 321.2.1 351-565 'C-terminal domain in urocanase' 'C-terminal domain in urocanase' 'Glutamine synthetase-like' 'a+b two layers' 002992923 Q87Q76_nD1 4022.1.1 11-145 'N-terminal a+b domain in urocanase (Pfam 01175)' 'N-terminal a+b domain in urocanase (Pfam 01175)' 'N-terminal a+b domain in urocanase (Pfam 01175)' 'a+b two layers' 002992924 Q87Q76_nD2 2003.1.1 146-350 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992925 Q87QW2_nD2 UNASSIGNED 406-465,936-980 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992926 Q87QW2_nD5 3291.1.1 616-645,816-830 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002992927 Q87QW2_nD8 192.2.1 346-360,1026-1045 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002992928 Q87QW2_nD6 3291.1.1 556-615,831-875 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002992929 Q87QW2_nD10 2004.1.1 1-220,1236-1485 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992930 Q87QW2_nD9 3755.3.1 286-345,1046-1125 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002992931 Q87QW2_nD7 874.1.1 646-815 'Smc hinge domain' 'Smc hinge domain' 'Smc hinge domain' 'a+b duplicates or obligate multimers' 002992932 Q87QW2_nD1 192.2.1 466-510,911-935 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002992933 Q87QW2_nD11 UNASSIGNED 226-285,1126-1235 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992934 Q87QW2_nD3 3755.4.1 361-405,986-1025 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'YscO-like' 'alpha bundles' 002992935 Q87QW2_nD4 3755.3.1 511-555,876-910 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002992936 Q87L30_nD1 2007.2.1 6-195 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992937 Q87MD1_nD1 243.3.1 6-99 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002992938 Q87PP5_nD1 5051.1.1 41-560 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002992939 Q87NQ4_nD2 5054.1.1 91-160 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002992940 Q87NQ4_nD1 129.1.1 11-85 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002992941 Q87HE3_nD3 192.8.1 421-490,526-600 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002992942 Q87HE3_nD4 3755.3.1 336-420,601-695 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002992943 Q87HE3_nD2 192.2.1 491-525 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002992944 Q87HE3_nD5 UNASSIGNED 261-335,696-780 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002992945 Q87HE3_nD1 2004.1.1 1-260,781-1015 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992946 Q87NT2_nD1 211.1.1 1-85 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002992947 Q87HM1_nD1 246.3.1 21-293 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002992948 Q87NT9_nD1 2007.1.1 6-248 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992949 Q87FZ6_nD1 5069.1.1 11-65,136-230,376-415,441-460 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002992950 Q87FZ6_nD2 243.3.1 66-135,251-375 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002992951 Q87M79_nD1 3502.1.1 6-75 'uncharacterized conserved protein' 'uncharacterized conserved protein' 'uncharacterized conserved protein' 'alpha bundles' 002992952 Q87FD3_nD1 2007.1.1 1-220 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992953 Q87G44_nD3 108.1.1 236-305 'EF-hand' 'EF-hand-related' 'EF-hand' 'alpha arrays' 002992954 Q87G44_nD1 2007.1.5 6-155,306-315 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992955 Q87G44_nD2 196.1.1 156-235 'Regulator of G-protein signaling, RGS' 'Regulator of G-protein signaling, RGS' 'Regulator of G-protein signaling, RGS' 'alpha bundles' 002992956 Q87Q57_nD1 3236.1.1 6-290 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002992957 Q87M83_nD1 2004.1.1 1-825 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992958 Q87M83_nD2 2008.1.1 831-1160 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002992959 Q87M15_nD1 10.1.2 31-145 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002992960 Q87S54_nD1 4120.1.1 6-55 'Tim10/DDP' 'Tim10/DDP' 'Tim10/DDP' 'few secondary structure elements' 002992961 Q87S54_nD2 223.1.1 91-210 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002992962 Q87S54_nD3 605.1.1 211-270 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002992963 Q87S54_nD4 225.1.1 276-430 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002992964 Q87HV2_nD3 7105.1.1 481-515 'Helical domain in class 2 OLD protein' 'Helical domain in class 2 OLD protein' 'Helical domain in class 2 OLD protein' 'alpha arrays' 002992965 Q87HV2_nD1 2004.1.1 1-370 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992966 Q87HV2_nD2 2006.1.3 371-540 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002992967 Q87TJ4_nD1 5059.1.1 1-285 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002992968 Q87SB0_nD3 148.1.3 311-385 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992969 Q87SB0_nD4 101.1.1 391-440 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992970 Q87SB0_nD1 2007.1.3 1-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992971 Q87SB0_nD2 2004.1.1 141-310 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992972 Q87JK7_nD1 5084.1.1 26-183 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002992973 Q87PR3_nD2 2484.1.1 211-465 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992974 Q87PR3_nD1 2484.1.1 6-210 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002992975 Q87PR3_nD3 511.1.1 466-605 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'beta sandwiches' 002992976 Q87PR3_nD4 109.4.1 621-930 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002992977 Q87LZ9_nD1 3660.1.1 1-30,51-75 'Protein-export membrane protein secG' 'Protein-export membrane protein secG' 'Protein-export membrane protein secG' 'alpha bundles' 002992978 Q87LK9_nD1 3070.2.1 36-165 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002992979 Q87LK9_nD2 5084.5.3 26-35,166-650 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002992980 Q87T39_nD1 7012.1.1 1-178 'Monotopic phosphoglycosyl transferase (PGT)-like' 'Monotopic phosphoglycosyl transferase (PGT)-like' 'Monotopic phosphoglycosyl transferase (PGT)-like' 'a+b complex topology' 002992981 Q87QE7_nD1 2007.1.3 6-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992982 Q87QE7_nD2 101.1.3 131-195 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002992983 Q87QF0_nD1 2003.1.2 216-360 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992984 Q87QF0_nD2 2003.1.3 6-215,361-580 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002992985 Q87FD9_nD1 2011.1.1 6-235 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002992986 Q87PS8_nD1 131.1.1 11-225 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002992987 Q87PS8_nD2 131.1.1 226-420 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002992988 Q87H74_nD1 4091.1.1 26-213 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'beta complex topology' 002992989 Q87I18_nD1 5084.4.1 46-310 'Outer membrane phospholipase A (OMPLA)' 'Outer membrane phospholipase A (OMPLA)' 'Outer membrane meander beta-barrels' 'beta barrels' 002992990 Q87GN9_nD2 101.1.2 126-235 'winged' 'HTH' 'HTH' 'alpha arrays' 002992991 Q87GN9_nD1 2007.1.3 6-125 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992992 Q87R54_nD1 5084.1.1 21-190 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002992993 Q87FY2_nD3 148.1.3 296-375 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002992994 Q87FY2_nD4 101.1.1 376-435 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002992995 Q87FY2_nD1 2007.1.3 1-125 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002992996 Q87FY2_nD2 2004.1.1 126-295 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002992997 Q87RM1_nD1 2485.1.1 21-145 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002992998 Q87NI3_nD1 4312.1.1 6-40 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002992999 Q87QT9_nD1 7503.1.1 36-160 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002993000 Q87QT9_nD2 5.1.3 26-35,161-450 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002993001 Q87N16_nD1 7504.1.1 1-193 'ITPase-like' 'ITPase-like' 'ITPase-like' 'a/b three-layered sandwiches' 002993002 Q87L78_nD1 2002.1.1 6-235 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993003 Q87L78_nD2 1.1.7 236-355 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993004 Q87S72_nD2 235.1.1 481-648 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002993005 Q87S72_nD1 109.4.1 36-480 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993006 Q87IY7_nD1 5084.5.1 36-263 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993007 Q87RJ9_nD1 322.1.1 1-80 'HPr-like' 'HPr-like' 'HPr-like' 'a+b two layers' 002993008 Q87MG0_nD1 247.1.1 1-250 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002993009 Q87PC0_nD3 2003.1.5 161-390 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993010 Q87PC0_nD4 2003.1.5 396-705 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993011 Q87PC0_nD2 4143.1.1 61-160 'THUMP domain-like' 'THUMP domain-like' 'THUMP domain-like' 'a+b two layers' 002993012 Q87PC0_nD1 304.120.1 1-60 'Ferredoxin-like domain in ThiI' 'Ferredoxin-like domain in ThiI' 'Alpha-beta plaits' 'a+b two layers' 002993013 Q87M41_nD2 274.1.1 51-170 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002993014 Q87M41_nD1 5027.1.1 26-50 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'Preprotein translocase SecE subunit' 'extended segments' 002993015 Q87M41_nD3 UNASSIGNED 243-284,317-333,356-400 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002993016 Q87MB8_nD5 11.1.1 336-425 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993017 Q87MB8_nD2 11.1.1 86-175 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993018 Q87MB8_nD6 11.1.1 431-520 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993019 Q87MB8_nD1 64.3.1 21-80 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002993020 Q87MB8_nD4 64.3.1 276-335 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002993021 Q87MB8_nD7 2002.1.1 521-845 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993022 Q87MB8_nD3 11.1.1 176-265 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993023 Q87JR9_nD1 5.1.3 66-678 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002993024 Q87KD4_nD2 270.1.1 211-315 'FMT C-terminal domain-related' 'FMT C-terminal domain-related' 'FMT C-terminal domain-like' 'beta barrels' 002993025 Q87KD4_nD1 7571.1.1 6-210 'Formyltransferase' 'Formyltransferase' 'Formyltransferase' 'a/b three-layered sandwiches' 002993026 Q87QD6_nD1 243.3.1 41-135 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002993027 Q87PU0_nD2 4006.1.1 361-440,486-500 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'Release factor (Pfam 00472) N-terminal alpha helical domain' 'alpha bundles' 002993028 Q87PU0_nD1 73.1.1 1-110 'SMAD/FHA domain' 'SMAD/FHA domain' 'SMAD/FHA domain' 'beta sandwiches' 002993029 Q87PU0_nD3 3443.1.1 441-485 'Get5 carboxyl domain' 'Get5 carboxyl domain' 'Get5 carboxyl domain' 'alpha duplicates or obligate multimers' 002993030 Q87LG2_nD1 304.13.1 1-130 'Hypothetical protein VC0424' 'Hypothetical protein VC0424' 'Alpha-beta plaits' 'a+b two layers' 002993031 Q87GB0_nD1 2004.1.1 41-295 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993032 Q87QI6_nD3 12.1.1 501-579 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002993033 Q87QI6_nD2 2002.1.1 171-500 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993034 Q87QI6_nD1 12.3.1 1-170 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002993035 Q87JU1_nD2 174.1.1 6-40,141-205 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'few secondary structure elements' 002993036 Q87JU1_nD1 881.1.1 46-140 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'Mog1p/PsbP-like' 'a+b three layers' 002993037 Q87MW8_nD1 102.1.2 1-210 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993038 Q87HV4_nD3 7523.1.1 161-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993039 Q87HV4_nD2 7523.1.1 81-160,271-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993040 Q87HV4_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993041 Q87GL2_nD1 5000.2.1 36-180 'Diphtheria toxin, middle domain' 'Diphtheria toxin, middle domain' 'Toxins' membrane translocation domains' 'alpha arrays' 002993042 Q87RB0_nD1 71.1.1 16-205 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002993043 Q87TD9_nD1 221.1.2 6-105 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002993044 Q87QG6_nD1 4085.1.1 1-60 'RbcX-like' 'RbcX-like' 'RbcX-like' 'alpha arrays' 002993045 Q87QG6_nD2 300.1.1 76-295 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002993046 Q87QG6_nD3 300.1.1 66-100,296-480 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002993047 Q87SH7_nD1 3261.1.1 31-110 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002993048 Q87SH7_nD2 3261.1.1 116-185 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002993049 Q87TR7_nD1 2007.2.1 1-144 'Flavoproteins' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993050 Q87GW7_nD1 304.8.1 6-80 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002993051 Q87HN0_nD1 2.1.1 36-123 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993052 Q87Q16_nD2 2003.1.1 106-300 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993053 Q87Q16_nD1 3692.1.1 1-105,301-320 'Ornithine cyclodeaminase-like enzymes dimerization domain' 'Ornithine cyclodeaminase-like enzymes dimerization domain' 'Ornithine cyclodeaminase-like enzymes dimerization domain' 'a+b two layers' 002993054 Q87Q02_nD2 304.25.1 176-285 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002993055 Q87Q02_nD1 2011.1.1 6-175,286-368 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002993056 O51859_nD4 3675.1.1 566-730 'DNA gyrase subunit B insertion domain' 'DNA gyrase subunit B insertion domain' 'DNA gyrase subunit B insertion domain' 'a+b complex topology' 002993057 O51859_nD3 2006.1.3 401-560,731-800 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002993058 O51859_nD2 212.1.1 221-395 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002993059 O51859_nD1 225.1.1 6-220 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002993060 Q87FV5_nD1 213.1.1 1-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993061 Q87Q46_nD1 7553.1.1 1-335 'Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)' 'Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)' 'Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)' 'a/b three-layered sandwiches' 002993062 Q87MW5_nD1 3009.1.1 1-205 'Insertion subdomain in DsbA-like' 'Insertion subdomain in DsbA-like' 'Insertion subdomain in DsbA-like' 'alpha arrays' 002993063 Q87KU7_nD2 7584.1.1 251-515 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002993064 Q87KU7_nD1 7584.1.1 6-250 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'Rossmann-like domain in Acetyl-CoA synthetase-like proteins' 'a/b three-layered sandwiches' 002993065 Q87KU7_nD3 327.5.1 516-645 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993066 Q87RA3_nD1 132.1.1 1-85 'Acyl-carrier protein (ACP)' 'Acyl-carrier protein (ACP)' 'ACP-like' 'alpha bundles' 002993067 Q87NX6_nD1 11.1.1 26-170 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993068 Q87SH8_nD1 4.1.2 6-110 'Stringent starvation protein B, SspB' 'SH3' 'SH3' 'beta barrels' 002993069 Q87PC1_nD1 2485.1.1 1-75 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002993070 Q87ML9_nD1 5084.5.3 1-25 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993071 Q87ML9_nD2 5084.5.4 26-415 'Outer membrane protein transport protein' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993072 Q87IV6_nD1 311.1.1 1-145 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002993073 Q87K32_nD2 3012.1.1 86-190 'Cof C2 cap domain' 'Cof C2 cap domain' 'Cof C2 cap domain' 'a+b two layers' 002993074 Q87K32_nD1 2006.1.1 6-85,191-265 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002993075 Q87FQ8_nD2 7512.1.1 471-810 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002993076 Q87FQ8_nD1 7512.1.1 11-240,261-470 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002993077 Q87G23_nD1 109.4.1 1-160 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993078 Q87HN3_nD1 1075.3.1 6-220 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993079 Q87L03_nD1 2004.1.1 1-150 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993080 Q87PI6_nD1 4177.1.1 6-138 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002993081 Q87FC9_nD2 2004.1.1 151-355 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993082 Q87FC9_nD1 2004.1.1 11-150 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993083 Q87FC9_nD4 101.1.1 601-680 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993084 Q87FC9_nD3 213.1.1 341-600 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993085 Q87PP3_nD1 7012.1.1 11-210 'Monotopic phosphoglycosyl transferase (PGT)-like' 'Monotopic phosphoglycosyl transferase (PGT)-like' 'Monotopic phosphoglycosyl transferase (PGT)-like' 'a+b complex topology' 002993086 Q87MX6_nD2 2004.1.1 416-590 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993087 Q87MX6_nD1 2004.1.1 6-415,591-670 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993088 Q87KZ2_nD1 2003.1.1 11-190 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993089 Q87KZ2_nD2 129.1.1 191-345 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002993090 Q87LB7_nD1 5106.1.1 6-30 'PetG subunit of the cytochrome b6f complex' 'PetG subunit of the cytochrome b6f complex' 'PetG subunit of the cytochrome b6f complex' 'extended segments' 002993091 Q87LB7_nD2 274.1.1 36-180 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002993092 Q87IM0_nD1 896.1.1 6-75 'Signal recognition particle alu RNA binding heterodimer SRP9/14-related' 'Signal recognition particle alu RNA binding heterodimer SRP9/14-related' 'SRP9/14-like' 'a+b two layers' 002993093 Q87ND2_nD1 221.1.1 1-85 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002993094 Q87TP9_nD3 2002.1.1 421-445 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993095 Q87TP9_nD2 2002.1.1 121-420,446-690 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993096 Q87TP9_nD1 3597.1.1 21-120 'Starch specific carbohydrate-binding modules' 'Starch specific carbohydrate-binding modules' 'Starch specific carbohydrate-binding modules' 'beta sandwiches' 002993097 Q87JB8_nD1 101.1.9 1-125 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002993098 Q87FI1_nD1 1.1.15 1-225 'PK beta-barrel domain-like' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993099 Q87HT6_nD1 2003.1.1 6-399 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993100 Q87HT2_nD1 2003.1.3 11-470 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993101 Q87NF9_nD1 3355.1.1 1-425 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002993102 Q87LL5_nD1 1079.1.1 6-205 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002993103 Q87K33_nD3 7523.1.1 161-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993104 Q87K33_nD2 7523.1.1 91-160,261-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993105 Q87K33_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002993106 Q87HK2_nD3 7523.1.1 161-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993107 Q87HK2_nD2 7523.1.1 91-160,266-294 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993108 Q87HK2_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002993109 Q87GR5_nD1 297.1.1 1-210 'YrdC/RibB' 'YrdC/RibB' 'YrdC/RibB' 'a+b complex topology' 002993110 Q87KA4_nD1 5046.1.1 26-135 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002993111 Q87NZ6_nD1 213.1.1 16-180 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993112 P59570_nD1 5084.6.1 21-265 'Tsx-like channel' 'Tsx-like channel' 'Outer membrane meander beta-barrels' 'beta barrels' 002993113 Q87KW1_nD1 3355.1.1 6-310,331-435 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002993114 Q87K00_nD2 5050.1.1 211-490 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993115 Q87K00_nD1 5050.1.1 1-210 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993116 Q87JB3_nD1 2003.1.5 6-195 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993117 Q87FP6_nD1 2003.6.1 1-285 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002993118 Q87Q64_nD1 304.28.1 46-230,436-460 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002993119 Q87Q64_nD2 5067.1.1 6-45,231-395 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002993120 Q87Q64_nD3 304.28.1 461-605 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002993121 Q87Q64_nD4 5067.1.1 396-435,606-770 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002993122 Q87MS7_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993123 Q87G30_nD1 213.1.1 1-160 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993124 Q87RZ3_nD1 2002.1.1 1-279 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993125 Q87LV4_nD2 131.2.1 181-425 'Poly A polymerase C-terminal region-like' 'Poly A polymerase C-terminal region-like' 'PDEase-like' 'alpha complex topology' 002993126 Q87LV4_nD1 316.1.1 21-180 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002993127 Q87LK5_nD1 5076.2.1 36-260 'Putative sulfate permease CysZ' 'Putative sulfate permease CysZ' 'Mitochondrial ADP/ATP carrier-like' 'alpha complex topology' 002993128 Q87MI5_nD1 307.1.1 1-225 'Hedgehog/DD-peptidase' 'Hedgehog/DD-peptidase' 'Hedgehog/DD-peptidase' 'a+b two layers' 002993129 Q87GH9_nD1 603.1.1 26-85 't-snare proteins' 't-snare proteins' 'STAT-like' 'alpha bundles' 002993130 Q87T95_nD1 605.1.1 11-75 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002993131 Q87T95_nD2 6055.1.1 81-125 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002993132 Q87IL2_nD3 2002.5.1 236-485 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002993133 Q87IL2_nD2 3379.1.1 6-20,221-235 'Photosystem II reaction center protein ycf12' 'Photosystem II reaction center protein ycf12' 'Photosystem II reaction center protein ycf12' 'extended segments' 002993134 Q87IL2_nD1 223.1.1 21-220 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993135 Q87K74_nD3 4168.1.1 221-280 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002993136 Q87K74_nD4 3755.4.1 281-320,506-545 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain' 'YscO-like' 'alpha bundles' 002993137 Q87K74_nD1 3479.1.1 6-180 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002993138 Q87K74_nD2 5043.2.1 196-220 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002993139 Q87K74_nD5 3755.3.1 321-505 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002993140 Q87MC5_nD1 4987.1.1 1-60 'Ribosomal protein L31p' 'Ribosomal protein L31p' 'Ribosomal protein L31p' 'few secondary structure elements' 002993141 Q87R88_nD1 206.1.1 6-480 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002993142 Q87SA8_nD1 2002.1.1 1-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993143 Q87FJ2_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993144 Q87FJ2_nD2 7523.1.1 86-160,266-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993145 Q87FJ2_nD3 7523.1.1 161-265,306-315 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993146 Q87HI1_nD2 1137.1.1 126-250 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain-like' 'a+b two layers' 002993147 Q87HI1_nD1 7550.1.1 11-125 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'a/b three-layered sandwiches' 002993148 Q87RD9_nD1 2004.1.1 1-175 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993149 Q87RD9_nD2 3290.1.1 176-255 'Cytosolic helical domain in ferrous iron transport protein B' 'Cytosolic helical domain in ferrous iron transport protein B' 'Cytosolic helical domain in ferrous iron transport protein B' 'alpha complex topology' 002993150 Q87RD9_nD5 7002.1.1 716-745 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'alpha duplicates or obligate multimers' 002993151 Q87RD9_nD3 5001.1.1 306-345,601-620 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002993152 Q87RD9_nD4 3415.1.1 271-305,351-585,651-715,746-755 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002993153 Q87PU5_nD1 2498.5.1 16-150 'GroEL-intermediate domain like' 'GroEL-intermediate domain like' 'Zincin-like' 'mixed a+b and a/b' 002993154 Q87PU5_nD2 327.2.1 151-305,331-343 'BolA-like' 'BolA-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993155 Q87MT7_nD1 101.1.4 1-84 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002993156 Q87PT1_nD1 7097.1.1 31-90 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002993157 Q87PT1_nD2 7097.1.1 91-160 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002993158 Q87JU6_nD2 632.7.1 101-250 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002993159 Q87JU6_nD1 3939.1.1 26-100 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002993160 Q87JU6_nD3 3758.2.1 251-435 'Biopolymer transport protein ExbB' 'Biopolymer transport protein ExbB' 'Bacterial hemolysins-like' 'alpha bundles' 002993161 Q87L43_nD1 2.1.1 16-120 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993162 Q87K02_nD1 5084.1.1 26-214 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002993163 Q87QB3_nD2 3016.1.1 436-540 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002993164 Q87QB3_nD1 7577.1.1 11-435 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002993165 Q87HV3_nD1 604.39.1 1-155 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002993166 Q87FL2_nD1 3227.1.1 6-385 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002993167 Q87FL2_nD2 306.1.1 401-480 'Glucose permease domain IIB' 'Glucose permease domain IIB' 'Glucose permease domain IIB-like' 'a+b two layers' 002993168 Q87I63_nD1 2007.1.3 6-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993169 Q87I63_nD2 109.4.1 146-540 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993170 Q87QH5_nD2 310.3.1 41-65 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002993171 Q87QH5_nD1 3928.1.1 6-30 'Cell division protein CrgA' 'Cell division protein CrgA' 'Cell division protein CrgA' 'alpha bundles' 002993172 Q87JM8_nD1 2485.1.1 21-183 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002993173 Q87IW8_nD1 7523.1.1 46-145 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993174 Q87IW8_nD2 1075.1.1 1-45,166-365 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993175 Q87RP7_nD2 217.2.1 206-290 'CorC/HlyC domain-like' 'CorC/HlyC domain-like' 'FAD-binding domain-like' 'a+b complex topology' 002993176 Q87RP7_nD1 282.1.1 38-205 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002993177 Q87JU8_nD2 5084.5.3 31-40,156-695 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993178 Q87JU8_nD1 3070.2.1 41-155 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002993179 Q87LT9_nD2 2002.1.1 126-290 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993180 Q87LT9_nD1 325.1.4 6-125 'Nicotinate/Quinolinate PRTase N-terminal domain-like' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993181 Q87IR8_nD1 6055.1.1 11-40 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002993182 Q87IR8_nD2 11.1.1 51-175 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993183 Q87LV9_nD1 2.1.1 1-80 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993184 Q87LV9_nD2 2008.1.1 81-238 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002993185 Q87K76_nD1 2498.1.1 6-210 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002993186 Q87MN0_nD1 1111.1.1 1-195 'Trimeric intracellular cation (TRIC) channel' 'Trimeric intracellular cation (TRIC) channel' 'Trimeric intracellular cation (TRIC) channel' 'alpha complex topology' 002993187 Q87K13_nD1 5084.5.1 21-225 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993188 Q87NX4_nD1 2498.1.1 21-508 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002993189 Q87MS4_nD2 298.1.1 146-315 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002993190 Q87MS4_nD1 2003.1.1 1-145,316-330 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993191 Q87H16_nD1 2007.1.2 26-150,286-380 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993192 Q87H16_nD2 2007.1.2 151-285,381-414 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993193 Q87NS3_nD1 5011.1.1 1-25 'Bacterial ba3 type cytochrome c oxidase subunit IIa' 'Bacterial ba3 type cytochrome c oxidase subunit IIa' 'Bacterial ba3 type cytochrome c oxidase subunit IIa' 'extended segments' 002993194 Q87T26_nD1 4018.1.1 6-110,271-335 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b two layers' 002993195 Q87T26_nD2 7587.1.2 111-270 'Rossmann-like domain in glpX-like bacterial fructose-1,6-bisphosphatase' 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'a/b three-layered sandwiches' 002993196 Q87LE6_nD2 282.1.1 201-320 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002993197 Q87LE6_nD1 2007.6.1 1-200 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993198 Q87MQ9_nD2 101.1.1 181-250 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993199 Q87MQ9_nD1 223.1.1 36-160 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993200 Q87LJ6_nD1 2002.1.1 1-230 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993201 Q87RS5_nD1 4205.1.1 6-180 'SMI1/KNR4-like' 'SMI1/KNR4-like' 'SMI1/KNR4-like' 'a+b two layers' 002993202 Q87KF0_nD1 2002.1.1 6-605 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993203 Q87SL9_nD1 101.1.4 6-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002993204 Q87QI2_nD1 2004.1.1 1-260 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993205 Q87JB7_nD1 191.1.1 6-130 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002993206 Q87MG2_nD1 2484.1.1 1-150 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993207 Q87S46_nD1 2004.1.1 1-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993208 Q87FM0_nD1 3264.1.1 1-140,161-180 'N-terminal domain of alcaligin biosynthesis protein C' 'N-terminal domain of alcaligin biosynthesis protein C' 'N-terminal domain of alcaligin biosynthesis protein C' 'a+b two layers' 002993209 Q87FM0_nD2 206.1.1 141-160,181-605 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002993210 Q87QG3_nD1 304.102.1 1-220 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002993211 Q87NF5_nD1 148.1.1 16-60 'Histone' 'Histone-related' 'Histone-like' 'alpha arrays' 002993212 Q87NF5_nD2 220.1.1 1-10,61-220 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002993213 Q87RX5_nD2 706.1.1 141-198 'Head domain of nucleotide exchange factor GrpE' 'Head domain of nucleotide exchange factor GrpE' 'Head domain of nucleotide exchange factor GrpE' 'beta complex topology' 002993214 Q87RX5_nD1 192.15.1 11-140 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002993215 Q87GI9_nD1 237.1.1 28-220 'ADP-ribosylation' 'ADP-ribosylation' 'ADP-ribosylation' 'a+b complex topology' 002993216 Q87RR3_nD1 5050.1.1 11-185 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993217 Q87GJ5_nD1 288.1.1 92-365 'CNF1/YfiH-like putative cysteine hydrolases' 'CNF1/YfiH-like putative cysteine hydrolases' 'CNF1/YfiH-like putative cysteine hydrolases' 'a+b four layers' 002993218 Q87PV3_nD2 11.1.1 12-85,248-325 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993219 Q87PV3_nD1 UNASSIGNED 86-165 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002993220 Q87K18_nD1 7560.1.1 1-210 'Ribose/Galactose isomerase RpiB/AlsB' 'Ribose/Galactose isomerase RpiB/AlsB' 'Ribose/Galactose isomerase RpiB/AlsB' 'a/b three-layered sandwiches' 002993221 Q87RZ0_nD2 246.1.1 211-505 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002993222 Q87RZ0_nD1 213.1.1 6-205 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993223 Q87M78_nD1 3610.1.1 1-165 'Tetrahydrodipicolinate N-succinyletransferase N-terminal domain' 'Tetrahydrodipicolinate N-succinyletransferase N-terminal domain' 'Tetrahydrodipicolinate N-succinyletransferase N-terminal domain' 'a+b complex topology' 002993224 Q87M78_nD2 208.1.1 166-343 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002993225 Q87GD8_nD1 101.1.3 1-75 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002993226 Q87NG5_nD1 2484.1.1 16-243 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993227 Q87TJ7_nD5 223.1.1 486-605 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993228 Q87TJ7_nD2 2007.1.2 141-265,296-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993229 Q87TJ7_nD6 304.48.1 606-780 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993230 Q87TJ7_nD1 2007.1.2 26-140,266-295 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993231 Q87TJ7_nD4 223.1.1 361-485 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993232 Q87TJ7_nD7 2002.5.1 786-1045 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002993233 Q87TJ7_nD3 4154.1.1 326-360 'E2F-DP heterodimerization region' 'E2F-DP heterodimerization region' 'E2F-DP heterodimerization region' 'beta duplicates or obligate multimers' 002993234 Q87M53_nD1 5051.1.1 6-355 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002993235 Q87H42_nD1 7581.1.1 6-270 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002993236 Q87H42_nD2 7581.1.1 271-390 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002993237 Q87RM8_nD1 221.1.2 6-60 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002993238 Q87RM8_nD2 304.102.1 66-235 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002993239 Q87HN2_nD1 7523.1.1 16-250 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993240 Q87RK7_nD1 579.1.1 41-100 'Anti-sigma factor FlgM' 'Anti-sigma factor FlgM' 'Anti-sigma factor FlgM' 'extended segments' 002993241 Q79YZ1_nD1 3747.1.1 1-130 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002993242 Q79YW7_nD2 5.1.5 66-110 '8-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002993243 Q79YW7_nD1 3538.1.1 36-60 'MerF' 'MerF' 'MerF' 'extended segments' 002993244 Q87SZ7_nD1 2484.1.1 6-115 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993245 Q79YW1_nD1 531.1.1 21-340 'C-terminal domain of FliG' 'C-terminal domain of FliG' 'Domains of FliG' 'alpha arrays' 002993246 Q87M99_nD1 142.1.1 11-125 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002993247 Q87M99_nD2 101.1.1 126-190 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993248 Q87ID0_nD1 192.17.1 6-40 'Rabenosyn-5 Rab-binding domain-like' 'Rabenosyn-5 Rab-binding domain-like' 'Long alpha-hairpin' 'alpha bundles' 002993249 Q87HA6_nD1 5010.1.1 1-35 'Bacterial aa3 type cytochrome c oxidase subunit IV' 'Bacterial aa3 type cytochrome c oxidase subunit IV' 'Bacterial aa3 type cytochrome c oxidase subunit IV' 'extended segments' 002993250 Q87J67_nD2 109.1.1 76-209 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002993251 Q87J67_nD1 2485.1.1 1-75 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002993252 Q87P83_nD1 301.3.1 71-190 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002993253 Q87Q75_nD1 2006.1.5 11-335 'Arginase/deacetylase' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002993254 Q87QA2_nD1 2003.4.1 6-245 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002993255 Q87QA2_nD2 2003.4.1 246-440 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002993256 Q87RQ1_nD1 7503.1.1 21-165 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002993257 Q87JF0_nD2 2003.1.7 66-240 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993258 Q87JF0_nD1 101.1.2 1-65 'winged' 'HTH' 'HTH' 'alpha arrays' 002993259 Q87N58_nD3 375.1.1 226-260 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993260 Q87N58_nD4 633.23.1 261-420 'Claudin' 'Claudin' 'Bromodomain-like' 'alpha bundles' 002993261 Q87N58_nD2 633.23.1 46-210 'Claudin' 'Claudin' 'Bromodomain-like' 'alpha bundles' 002993262 Q87N58_nD1 375.1.1 6-45 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993263 Q87FN0_nD2 325.1.6 141-285 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993264 Q87FN0_nD1 3922.1.1 21-125 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002993265 Q87FN0_nD3 1115.1.1 126-140,271-315 'Csd1/Csd2 helical domain' 'Csd1/Csd2 helical domain' 'Csd1/Csd2 helical domain' 'alpha arrays' 002993266 Q87T09_nD1 838.1.1 1-90 'Ribosomal protein S19' 'Ribosomal protein S19' 'Ribosomal protein S19' 'a+b two layers' 002993267 Q87LS9_nD1 1.1.7 11-100 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993268 Q87LS9_nD2 4.6.1 106-180 'PRC-barrel domain' 'PRC-barrel domain' 'SH3' 'beta barrels' 002993269 Q87T86_nD1 102.1.1 16-90 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993270 Q87T86_nD2 2492.1.1 96-224 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002993271 Q87N42_nD1 2003.1.1 1-248 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993272 Q87ID9_nD1 310.2.1 1-95 'Ribosome recycling factor, RRF' 'Ribosome recycling factor, RRF' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002993273 Q87Q42_nD1 2498.1.1 6-595 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002993274 Q87TN4_nD1 2003.1.1 6-210 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993275 Q87TN4_nD2 129.1.1 211-494 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002993276 Q87NP2_nD2 300.1.1 131-270 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002993277 Q87NP2_nD1 110.1.1 1-120 'DEATH domain' 'DEATH domain' 'DEATH domain' 'alpha arrays' 002993278 Q87KL4_nD1 5043.2.1 6-30 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002993279 Q87S01_nD1 2003.1.3 1-418 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993280 Q87IH1_nD2 304.6.1 211-460 'FAD-linked oxidases, C-terminal domain' 'FAD-linked oxidases, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002993281 Q87IH1_nD1 217.1.1 6-210 'FAD-binding domain' 'FAD-binding domain' 'FAD-binding domain-like' 'a+b complex topology' 002993282 Q87TK1_nD2 244.2.1 341-455 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD/NAD-linked reduatases, dimerisation (C-terminal) domain' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002993283 Q87TK1_nD1 2003.1.2 6-340 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993284 Q87SW1_nD1 2.5.1 1-175 'Inorganic pyrophosphatase' 'Inorganic pyrophosphatase' 'OB-fold' 'beta barrels' 002993285 Q87L39_nD2 101.1.6 166-235 'TrpR' 'HTH' 'HTH' 'alpha arrays' 002993286 Q87L39_nD1 223.1.1 26-160 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993287 Q87Q87_nD1 206.1.2 6-365 'SAICAR synthase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002993288 Q87LL2_nD1 2002.1.1 1-175,196-358 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993289 Q87JN1_nD1 2006.1.1 1-224 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002993290 Q87M91_nD1 244.3.1 6-140 'SufE/NifU' 'SufE/NifU' 'FAD-linked reductases, C-terminal domain-like' 'a+b two layers' 002993291 Q87IF4_nD1 5046.1.1 6-30 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002993292 Q87TF9_nD1 107.1.1 21-105 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002993293 Q87TF9_nD2 107.1.1 106-205 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002993294 Q87K36_nD2 3755.1.1 106-275 'Putative type III secretion protein YscO-related' 'Putative type III secretion protein YscO-related' 'YscO-like' 'alpha bundles' 002993295 Q87K36_nD1 325.1.7 6-105,276-345 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993296 Q87K36_nD3 304.102.1 351-559 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002993297 Q87JI6_nD3 4167.1.1 66-140,281-360 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'beta complex topology' 002993298 Q87JI6_nD1 3747.1.1 1-60,361-395 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002993299 Q87JI6_nD2 4998.1.1 146-280 'Flagellar hook protein flgE D2 domain' 'Flagellar hook protein flgE D2 domain' 'Flagellar hook protein flgE D2 domain-like' 'beta sandwiches' 002993300 Q87PH8_nD2 375.1.1 116-150 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993301 Q87PH8_nD1 2003.1.4 1-115,151-240 'DHS-like NAD/FAD-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993302 Q87NM4_nD1 213.1.1 1-130 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993303 Q87TJ8_nD2 304.4.1 116-200 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002993304 Q87TJ8_nD1 101.1.2 31-115 'winged' 'HTH' 'HTH' 'alpha arrays' 002993305 Q87I01_nD2 1.1.8 286-370 'Aminomethyltransferase beta-barrel domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993306 Q87I01_nD1 304.107.1 6-280 'Aminomethyltransferase folate-binding domain' 'Aminomethyltransferase folate-binding domain' 'Alpha-beta plaits' 'a+b two layers' 002993307 Q87GR9_nD1 101.1.4 1-80 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002993308 Q87GR9_nD2 101.1.2 81-225 'winged' 'HTH' 'HTH' 'alpha arrays' 002993309 Q87G46_nD2 182.1.1 201-470 'Cryptochrome/photolyase FAD-binding domain' 'Cryptochrome/photolyase FAD-binding domain-related' 'Cryptochrome/photolyase FAD-binding domain-related' 'alpha complex topology' 002993310 Q87G46_nD1 2005.1.1 1-200 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993311 Q87ID7_nD1 150.5.1 6-100 'ESAT-6 like' 'ESAT-6 like' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002993312 Q87RG0_nD1 7579.1.1 1-255 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002993313 Q9AJH1_nD1 2003.1.5 6-110,216-315 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993314 Q9AJH1_nD2 102.1.1 116-215 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993315 Q87SA3_nD4 2002.1.1 416-745 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993316 Q87SA3_nD3 2487.1.1 171-190,316-415 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002993317 Q87SA3_nD2 607.1.1 191-310 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain' 'alpha arrays' 002993318 Q87SA3_nD1 223.1.1 1-170 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993319 Q87P34_nD1 241.1.1 21-150 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002993320 Q87KV9_nD2 101.1.3 146-205 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002993321 Q87KV9_nD1 2007.1.3 6-145 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993322 Q87P97_nD1 1075.1.2 186-250 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993323 Q87P97_nD2 1075.3.1 46-180,251-395 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993324 Q87JS1_nD2 101.1.1 176-225 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993325 Q87JS1_nD1 10.12.1 1-175 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002993326 Q87JS1_nD3 101.1.1 226-288 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993327 Q87MD5_nD2 192.14.1 96-125 'Siah interacting protein N terminal domain-like' 'Siah interacting protein N terminal domain-like' 'Long alpha-hairpin' 'alpha bundles' 002993328 Q87MD5_nD1 220.1.1 1-90 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002993329 Q87SI3_nD1 3860.1.1 6-40 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002993330 Q87MT5_nD1 2003.1.1 1-229 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993331 Q87HB2_nD1 4111.1.1 1-134 'AF0104/ALDC/Ptd012-like' 'AF0104/ALDC/Ptd012-like' 'AF0104/ALDC/Ptd012-like' 'a+b two layers' 002993332 Q87PU2_nD2 109.4.1 236-355 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993333 Q87PU2_nD1 109.51.1 11-195 'TssA helical domains' 'TssA helical domains' 'Repetitive alpha hairpins' 'alpha superhelices' 002993334 Q87PU2_nD4 857.1.1 391-430 'Cell division protein ZapA-like' 'Cell division protein ZapA-like' 'Cell division protein ZapA-like' 'a+b duplicates or obligate multimers' 002993335 Q87PU2_nD3 632.22.1 356-390 'Cell division protein EzrA repeats' 'Cell division protein EzrA repeats' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002993336 Q87I48_nD1 221.4.1 6-150 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002993337 Q87T08_nD1 218.2.1 1-110 'Ribosomal protein L22' 'Ribosomal protein L22' 'Enolase-N/ribosomal protein' 'a+b two layers' 002993338 Q87FV7_nD1 213.1.1 1-150 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993339 Q87ME8_nD1 222.1.1 6-150 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002993340 Q87HG1_nD1 5059.1.1 41-100 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002993341 Q87JW6_nD1 150.1.2 1-220 'Heme oxygenase/Ribonucleotide reductase' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002993342 Q87ST9_nD1 7501.1.1 1-160 'Dihydrofolate reductases' 'Dihydrofolate reductases' 'Dihydrofolate reductases' 'a/b three-layered sandwiches' 002993343 Q87TC0_nD7 2.1.1 641-725 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993344 Q87TC0_nD3 4342.1.1 106-320 'Tex N-terminal region-like' 'Tex N-terminal region-like' 'Tex N-terminal region-like' 'alpha complex topology' 002993345 Q87TC0_nD4 2484.1.1 321-475 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993346 Q87TC0_nD2 632.13.1 66-105 'Tex bundle domain-like' 'Tex bundle domain-like' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002993347 Q87TC0_nD5 102.1.1 476-560 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993348 Q87TC0_nD1 101.26.1 6-65 'Tex N-terminal domain' 'Tex N-terminal domain' 'HTH' 'alpha arrays' 002993349 Q87TC0_nD6 102.1.1 561-630 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993350 Q87GD4_nD1 5054.1.1 21-94 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002993351 Q87SA7_nD1 896.1.1 1-100 'Signal recognition particle alu RNA binding heterodimer SRP9/14-related' 'Signal recognition particle alu RNA binding heterodimer SRP9/14-related' 'SRP9/14-like' 'a+b two layers' 002993352 Q87KN8_nD1 2003.1.5 11-369 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993353 Q87JF2_nD1 304.3.2 1-155 'Peptide methionine sulfoxide reductase' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002993354 Q87KA6_nD1 1.1.7 36-105 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993355 Q87KA6_nD2 2004.1.1 106-390 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993356 Q87KA6_nD3 160.1.1 391-523 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002993357 Q87LR5_nD1 4313.1.1 1-60 'CsrA-like' 'CsrA-like' 'CsrA-like' 'beta duplicates or obligate multimers' 002993358 Q87PC8_nD2 101.1.11 91-130 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002993359 Q87PC8_nD1 3577.1.1 1-85 'Macrodomain Ter protein MatP' 'Macrodomain Ter protein MatP' 'Macrodomain Ter protein MatP' 'alpha arrays' 002993360 Q87MX0_nD1 3518.1.1 6-200 'putative RnfG subunit of electron transport complex' 'putative RnfG subunit of electron transport complex' 'putative RnfG subunit of electron transport complex' 'a+b two layers' 002993361 Q87MR3_nD4 4.1.1 386-455 'SH3' 'SH3' 'SH3' 'beta barrels' 002993362 Q87MR3_nD3 5058.1.1 266-385 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002993363 Q87MR3_nD1 109.4.1 41-100 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993364 Q87MR3_nD5 304.39.1 456-555 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002993365 Q87MR3_nD2 603.1.1 101-265 't-snare proteins' 't-snare proteins' 'STAT-like' 'alpha bundles' 002993366 Q87HA9_nD1 2004.1.1 1-260 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993367 Q87G49_nD2 2004.1.1 221-390 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993368 Q87G49_nD1 2004.1.1 1-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993369 Q87PU4_nD1 101.1.2 1-60 'winged' 'HTH' 'HTH' 'alpha arrays' 002993370 Q87PU4_nD2 304.4.1 61-145 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002993371 Q87HW0_nD1 2002.5.1 1-260 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002993372 Q87LT5_nD2 3457.1.1 11-45,106-285 'GxGD membrane protease' 'GxGD membrane protease' 'GxGD membrane protease' 'alpha bundles' 002993373 Q87LT5_nD1 375.1.1 68-105 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993374 Q87LP1_nD2 377.1.1 86-235 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002993375 Q87LP1_nD1 2.1.1 6-85 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993376 Q87RU4_nD1 2007.1.13 6-155 'Lumazine synthase' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993377 Q87JI5_nD2 4167.1.1 71-200 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'beta complex topology' 002993378 Q87JI5_nD1 3747.1.1 1-70,201-240 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002993379 Q87GZ5_nD1 3052.1.1 51-145 'MoeA domain II' 'MoeA domain II' 'MoeA domain II' 'a+b complex topology' 002993380 Q87GZ5_nD2 275.1.1 26-50,146-175 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002993381 Q87GZ5_nD4 70.1.1 331-410 'MoeA C-terminal domain-like' 'MoeA C-terminal domain-like' 'beta-clip' 'beta barrels' 002993382 Q87GZ5_nD3 7541.1.1 11-25,176-330 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'Molybdenum cofactor biosynthesis proteins' 'a/b three-layered sandwiches' 002993383 Q87HN6_nD2 304.48.1 156-320 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993384 Q87HN6_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993385 Q87RJ0_nD2 2.1.1 91-153 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993386 Q87RJ0_nD1 3843.1.1 6-75 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'alpha complex topology' 002993387 Q87MP1_nD1 304.102.1 1-260 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002993388 Q87MR1_nD1 142.1.1 6-55 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002993389 Q87TG2_nD1 2006.1.4 6-170 'PIN domain-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002993390 Q87TG2_nD5 304.48.1 696-720,846-930 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993391 Q87TG2_nD2 102.1.1 171-290,321-520 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993392 Q87TG2_nD4 4964.1.1 721-845 'helical bundle in Bacillus stearothermophilus-like DNA polymerase I' 'helical bundle in Bacillus stearothermophilus-like DNA polymerase I' 'helical bundle in Bacillus stearothermophilus-like DNA polymerase I' 'alpha arrays' 002993393 Q87TG2_nD3 4970.1.1 521-695 '"fingers" domain in bacteriophage RB69-like DNA polymerase I' '"fingers" domain in bacteriophage RB69-like DNA polymerase I' '"fingers" domain in bacteriophage RB69-like DNA polymerase I' 'alpha bundles' 002993394 P22096_nD2 7544.1.1 66-330 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain' 'a/b three-layered sandwiches' 002993395 P22096_nD1 184.1.1 1-65 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'Nucleoside phosphorylase/phosphoribosyltransferase-N' 'alpha arrays' 002993396 Q87KD7_nD3 101.1.2 301-370 'winged' 'HTH' 'HTH' 'alpha arrays' 002993397 Q87KD7_nD1 102.1.1 6-80 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993398 Q87KD7_nD2 7563.1.1 81-300 'MCP/YpsA-related' 'MCP/YpsA-related' 'MCP/YpsA-related' 'a/b three-layered sandwiches' 002993399 Q87M20_nD1 2002.1.1 1-255 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993400 Q87H25_nD1 286.1.1 1-115 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002993401 Q87H25_nD2 286.1.1 116-250 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'Diaminopimelate epimerase-like' 'a+b complex topology' 002993402 Q87IE6_nD1 2004.1.1 1-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993403 Q87LD1_nD1 5051.1.1 11-420 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002993404 Q87MM0_nD2 881.4.1 116-240 'C-terminal domain in sigma-E factor regulatory protein rseB' 'C-terminal domain in sigma-E factor regulatory protein rseB' 'Mog1p/PsbP-like' 'a+b three layers' 002993405 Q87MM0_nD1 564.1.1 1-50 'N-terminal, cytoplasmic domain of anti-sigma factors' 'N-terminal, cytoplasmic domain of anti-sigma factors' 'N-terminal, cytoplasmic domain of anti-sigma factors' 'alpha arrays' 002993406 Q87TG0_nD1 2004.1.1 1-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993407 Q87TC4_nD1 80.1.1 1-100 'HesB-like domain' 'HesB-like domain' 'HesB-like domain' 'beta complex topology' 002993408 Q87TC4_nD2 327.6.1 106-185 'Fe-S cluster assembly (FSCA) domain-like' 'Fe-S cluster assembly (FSCA) domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993409 Q87LL4_nD1 299.1.1 6-163 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'a+b complex topology' 002993410 Q87J77_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993411 Q87J77_nD2 7523.1.1 81-160,256-285 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993412 Q87J77_nD3 7523.1.1 161-255 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993413 Q87KR3_nD1 3813.1.1 1-195 'DUF416' 'DUF416' 'DUF416' 'alpha bundles' 002993414 Q87FS7_nD1 304.103.1 1-240 'FMN-dependent nitroreductase-like' 'FMN-dependent nitroreductase-like' 'Alpha-beta plaits' 'a+b two layers' 002993415 Q87I73_nD2 7523.1.1 81-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993416 Q87I73_nD1 101.1.2 6-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993417 Q87HR8_nD1 306.3.1 26-103 'eIF1-like' 'eIF1-like' 'Glucose permease domain IIB-like' 'a+b two layers' 002993418 Q87Q71_nD1 5084.1.1 26-325 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002993419 Q87T21_nD1 2004.1.1 6-330 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993420 Q87T21_nD2 148.1.3 331-443 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002993421 Q87RI5_nD1 2003.1.1 1-300 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993422 Q87L75_nD2 523.1.1 56-150 'Ribosomal protein L9 C-domain' 'Ribosomal protein L9 C-domain' 'Ribosomal protein L9 C-domain' 'a+b two layers' 002993423 Q87L75_nD1 4076.1.1 1-55 'L9 N-domain-like' 'L9 N-domain-like' 'L9 N-domain-like' 'a+b two layers' 002993424 Q87NP5_nD1 2008.1.1 36-189,216-345 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002993425 Q87LB3_nD1 274.1.1 6-150 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002993426 Q87PD0_nD1 272.1.1 36-120 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'a+b two layers' 002993427 Q87KQ4_nD2 4010.1.1 21-150,451-575 'N-terminal domain in beta subunit of DNA dependent RNA-polymerase' 'N-terminal domain in beta subunit of DNA dependent RNA-polymerase' 'N-terminal domain in beta subunit of DNA dependent RNA-polymerase' 'a+b complex topology' 002993428 Q87KQ4_nD8 3681.1.1 941-1040 'Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit' 'Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit' 'Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit' 'a+b complex topology' 002993429 Q87KQ4_nD5 4042.1.1 581-710 'barrel domain in beta subunit of DNA dependent RNA-polymerase' 'barrel domain in beta subunit of DNA dependent RNA-polymerase' 'barrel domain in beta subunit of DNA dependent RNA-polymerase' 'a+b complex topology' 002993430 Q87KQ4_nD6 325.1.7 711-790 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993431 Q87KQ4_nD10 4043.1.1 1241-1340 'C-terminal domain in beta subunit of DNA dependent RNA-polymerase' 'C-terminal domain in beta subunit of DNA dependent RNA-polymerase' 'C-terminal domain in beta subunit of DNA dependent RNA-polymerase' 'a+b complex topology' 002993432 Q87KQ4_nD9 1.1.2 791-830,1061-1240 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993433 Q87KQ4_nD7 325.1.7 831-890,911-940,1041-1060 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993434 Q87KQ4_nD1 275.1.1 236-290 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002993435 Q87KQ4_nD3 275.1.1 226-235,291-340 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002993436 Q87KQ4_nD4 4041.1.1 151-225,341-450 'insertion domain in beta subunit of DNA dependent RNA-polymerase' 'insertion domain in beta subunit of DNA dependent RNA-polymerase' 'insertion domain in beta subunit of DNA dependent RNA-polymerase' 'a+b complex topology' 002993437 Q87R77_nD3 284.1.1 226-260,371-485 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002993438 Q87R77_nD4 284.1.1 191-200,486-575 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002993439 Q87R77_nD1 589.1.1 41-190,576-610 'Porin chaperone SurA, peptide-binding domain' 'Triger factor/SurA peptide-binding domain-like' 'Triger factor/SurA peptide-binding domain-like' 'alpha arrays' 002993440 Q87R77_nD2 284.1.1 271-365 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002993441 Q87HH2_nD2 2.1.1 136-220 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993442 Q87HH2_nD5 11.1.1 566-670 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993443 Q87HH2_nD1 616.1.1 56-135 'S15/NS1 RNA-binding domain' 'S15/NS1 RNA-binding domain' 'S15/NS1 RNA-binding domain' 'alpha arrays' 002993444 Q87HH2_nD6 11.1.1 676-785 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993445 Q87HH2_nD3 2498.1.1 236-430 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002993446 Q87HH2_nD7 11.1.1 791-880 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993447 Q87HH2_nD4 5090.2.1 431-560 'Immune inhibitor A metallopeptidase C-terminal domain' 'Immune inhibitor A metallopeptidase C-terminal domain' 'Viral glycoprotein, central and dimerisation domains-like' 'beta complex topology' 002993448 Q87FY7_nD3 160.1.1 371-445 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'C-terminal domain of alpha and beta subunits of F1 ATP synthase' 'alpha superhelices' 002993449 Q87FY7_nD2 2004.1.1 101-370 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993450 Q87FY7_nD1 1.1.7 21-100 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993451 Q87NU2_nD1 7524.1.1 11-135 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002993452 Q87KY1_nD1 5069.1.3 11-125 'Fumarate reductase respiratory complex transmembrane subunits' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002993453 Q87S24_nD4 632.7.1 521-615 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'Heat shock protein 70kD (HSP70), C-terminal subdomain' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002993454 Q87S24_nD3 511.1.1 391-500 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'Heat shock protein 70kD (HSP70), peptide-binding domain' 'beta sandwiches' 002993455 Q87S24_nD2 2484.1.1 191-380 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993456 Q87S24_nD1 2484.1.1 21-190,381-390 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993457 Q87JQ8_nD1 2003.1.3 1-408 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993458 Q87RG5_nD1 3227.1.1 6-420 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002993459 Q87RG5_nD2 306.1.1 436-510 'Glucose permease domain IIB' 'Glucose permease domain IIB' 'Glucose permease domain IIB-like' 'a+b two layers' 002993460 Q87QD2_nD2 304.124.1 126-240 'Phage tail protein-like' 'Phage tail protein-like' 'Alpha-beta plaits' 'a+b two layers' 002993461 Q87QD2_nD1 563.1.1 31-125 'N-terminal domain of the delta subunit of the F1F0-ATP synthase' 'N-terminal domain of the delta subunit of the F1F0-ATP synthase' 'ATPD N-terminal domain-like' 'alpha bundles' 002993462 Q87JB4_nD1 1.1.9 1-155 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993463 Q79YY6_nD2 4167.1.1 81-225 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'Flagellar hook protein flgE D1 domain' 'beta complex topology' 002993464 Q79YY6_nD1 3747.1.1 1-80,226-260 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002993465 Q87L73_nD1 2.1.1 1-100 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993466 Q87I66_nD3 7523.1.1 201-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993467 Q87I66_nD1 101.1.2 21-120 'winged' 'HTH' 'HTH' 'alpha arrays' 002993468 Q87I66_nD2 7523.1.1 121-200,296-329 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993469 Q87H95_nD1 101.1.1 26-95 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993470 Q87QU6_nD1 5069.1.1 16-525 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002993471 Q87H10_nD2 205.1.1 446-540 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002993472 Q87H10_nD1 2003.1.2 6-445 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993473 Q9LCJ0_nD3 7514.1.1 266-405 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002993474 Q9LCJ0_nD2 1.1.7 131-265 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993475 Q9LCJ0_nD1 221.1.1 1-125 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002993476 Q87QP7_nD1 2003.1.5 1-398 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993477 Q87QP7_nD2 206.1.3 281-335 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002993478 Q87GI4_nD2 330.15.1 166-253 'VtrA protein periplasmic domain' 'VtrA protein periplasmic domain' 'dsRBD-like' 'a+b two layers' 002993479 Q87GI4_nD1 101.1.2 1-155 'winged' 'HTH' 'HTH' 'alpha arrays' 002993480 Q87KZ7_nD5 3291.1.1 436-535 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002993481 Q87KZ7_nD2 3757.1.1 6-25,266-295 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002993482 Q87KZ7_nD1 223.1.1 26-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993483 Q87KZ7_nD4 UNASSIGNED 351-435,536-620 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002993484 Q87KZ7_nD3 4168.1.1 296-350 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002993485 Q87R94_nD2 2004.1.1 216-405 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993486 Q87R94_nD1 2004.1.1 1-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993487 Q87JX3_nD1 2003.1.1 1-243 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993488 Q87LU5_nD1 3226.1.1 1-410 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002993489 Q87LU5_nD2 2496.1.1 411-555 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002993490 Q87HZ4_nD1 2003.6.1 6-20,41-315 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002993491 Q87N78_nD3 1075.1.2 1-50,261-400 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993492 Q87N78_nD2 1.1.2 106-215 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993493 Q87N78_nD1 304.128.1 56-105,216-260 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002993494 Q87N41_nD1 2004.1.1 26-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993495 Q87G56_nD1 7523.1.1 18-273 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993496 Q87SY7_nD2 284.1.1 76-205 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002993497 Q87SY7_nD1 3405.1.1 6-75 'FkpA dimerization domain-like' 'FkpA dimerization domain-like' 'FkpA dimerization domain-like' 'alpha duplicates or obligate multimers' 002993498 Q87KE1_nD1 2007.1.9 1-160 'N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993499 Q87M38_nD3 1.1.7 116-220 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993500 Q87M38_nD2 70.3.1 41-105 'SET domain-like' 'SET domain-like' 'beta-clip' 'beta barrels' 002993501 Q87M38_nD1 5014.1.1 6-30 'iron-sulfur subunit (ISP) transmembrane anchor' 'iron-sulfur subunit (ISP) transmembrane anchor' 'iron-sulfur subunit (ISP) transmembrane anchor' 'extended segments' 002993502 Q87HG8_nD1 7579.1.1 1-260 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002993503 Q87GS0_nD1 131.1.1 1-210 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002993504 Q87MW1_nD1 2003.1.1 1-225 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993505 Q87I77_nD1 274.1.1 36-195 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002993506 Q87FX7_nD1 5043.1.1 1-89 'Htr2 transmembrane domain-like' 'Htr2 transmembrane domain-like' 'Sensor proteins transmembrane domains' 'extended segments' 002993507 Q87JY7_nD1 109.4.1 1-178 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993508 Q87TH8_nD1 5054.1.1 26-95,136-335 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002993509 Q87FV3_nD3 7523.1.1 176-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993510 Q87FV3_nD1 101.1.2 6-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002993511 Q87FV3_nD2 7523.1.1 96-175,291-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993512 Q87TJ0_nD2 1.10.1 191-260,326-345 'HI0933 barrel domain-like' 'HI0933 barrel domain-like' 'cradle loop barrel' 'beta barrels' 002993513 Q87TJ0_nD1 2003.1.2 6-190,346-395 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993514 Q87TJ0_nD3 102.2.1 261-325 'H2TH' 'H2TH' 'HhH/H2TH' 'alpha arrays' 002993515 Q87QB2_nD1 5041.1.1 16-170 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'F1F0 ATP synthase subunit C' 'extended segments' 002993516 Q87S57_nD2 1.1.7 371-465 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993517 Q87S57_nD1 2002.1.1 6-205,266-370 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993518 Q87SB5_nD2 101.1.8 121-300 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002993519 Q87SB5_nD1 186.1.1 6-120 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002993520 Q87QV0_nD1 2004.1.1 6-185 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993521 Q87QV0_nD2 4168.1.1 186-215,236-270 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002993522 Q87QV0_nD3 5046.1.1 291-330 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002993523 Q87MV3_nD1 233.1.1 1-190 'MHC antigen-recognition domain' 'MHC antigen-recognition domain' 'MHC antigen-recognition domain' 'a+b two layers' 002993524 Q87MV3_nD2 3208.1.1 191-285 'RNA polymerase-associated protein Gp33' 'RNA polymerase-associated protein Gp33' 'RNA polymerase-associated protein Gp33' 'alpha arrays' 002993525 Q87MV3_nD3 1133.1.1 286-330 'Immunomodulator A46 N-terminal domain' 'Immunomodulator A46 N-terminal domain' 'Immunomodulator A46 N-terminal domain' 'beta sandwiches' 002993526 Q87TE0_nD2 4203.1.1 231-280 'HSP33 redox switch-like' 'HSP33 redox switch-like' 'HSP33 redox switch-like' 'few secondary structure elements' 002993527 Q87TE0_nD1 848.1.1 1-230 'Hsp33 domain' 'Hsp33 domain' 'Hsp33 domain' 'a+b complex topology' 002993528 Q87PA3_nD2 5058.1.1 236-300 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002993529 Q87PA3_nD1 109.3.1 61-225 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993530 Q87PA3_nD3 11.1.5 1-60,226-235,301-450 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993531 Q87SB2_nD1 304.116.1 1-120 'Ferredoxin-like domain in release factor' 'Ferredoxin-like domain in release factor' 'Alpha-beta plaits' 'a+b two layers' 002993532 Q87SB2_nD2 330.3.1 121-205 'Peptidyl-tRNA hydrolase domain-like' 'Peptidyl-tRNA hydrolase domain-like' 'dsRBD-like' 'a+b two layers' 002993533 Q87SB2_nD3 330.3.1 206-260 'Peptidyl-tRNA hydrolase domain-like' 'Peptidyl-tRNA hydrolase domain-like' 'dsRBD-like' 'a+b two layers' 002993534 Q87J22_nD2 2007.1.3 151-304 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993535 Q87J22_nD1 2.10.1 11-150 'CheW' 'CheW' 'OB-fold' 'beta barrels' 002993536 Q87KM6_nD1 327.16.1 1-65 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993537 Q87KM6_nD2 5081.1.1 96-280 'Rhomboid-like' 'Rhomboid-like' 'Rhomboid-like' 'alpha bundles' 002993538 Q87NG0_nD2 3488.1.1 31-195 'Putative sensor histidine kinase domain' 'Putative sensor histidine kinase domain' 'Putative sensor histidine kinase domain' 'a+b three layers' 002993539 Q87NG0_nD1 3479.1.1 1-30,196-225 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002993540 Q87NG0_nD3 605.1.1 231-315 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002993541 Q87NG0_nD4 225.1.1 316-450 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002993542 Q87FT7_nD1 304.103.1 1-215 'FMN-dependent nitroreductase-like' 'FMN-dependent nitroreductase-like' 'Alpha-beta plaits' 'a+b two layers' 002993543 Q87I34_nD1 142.1.1 6-75 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002993544 Q87K95_nD1 2004.1.1 1-310 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993545 Q87P62_nD3 603.5.1 246-325 'FlgN-like' 'FlgN-like' 'STAT-like' 'alpha bundles' 002993546 Q87P62_nD2 1014.1.1 146-175 'AopB' 'AopB' 'AopB' 'alpha arrays' 002993547 Q87P62_nD1 UNASSIGNED 66-125 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002993548 Q87LT3_nD1 4946.1.1 11-175 'helical domain in YacF-like proteins' 'helical domain in YacF-like proteins' 'helical domain in YacF-like proteins' 'alpha bundles' 002993549 Q87LT3_nD2 4287.1.1 1-10,176-245 'beta sandwich domain in YacF-like proteins' 'beta sandwich domain in YacF-like proteins' 'beta sandwich domain in YacF-like proteins' 'beta sandwiches' 002993550 Q87JS3_nD3 7523.1.1 156-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993551 Q87JS3_nD2 7523.1.1 86-155,271-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993552 Q87JS3_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993553 Q87PH4_nD1 1075.3.1 1-285 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993554 Q87NX5_nD2 1079.1.1 71-95,186-210 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'Transmembrane reductase CcdA' 'alpha complex topology' 002993555 Q87NX5_nD1 5051.1.1 6-70,101-185 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002993556 Q87PY1_nD1 327.16.1 26-120 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993557 Q87K15_nD1 2002.1.1 1-205 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993558 Q87KF2_nD1 2003.1.9 6-255 'Activating enzymes of the ubiquitin-like proteins' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993559 Q87IB5_nD1 2492.1.1 1-140 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002993560 Q87GR1_nD3 102.1.4 211-335 'Nop C-terminal domain' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993561 Q87GR1_nD2 606.1.1 111-210 'Nop N-terminal domain' 'Nop N-terminal domain' 'Nop N-terminal domain' 'alpha complex topology' 002993562 Q87GR1_nD1 2484.1.1 6-110 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993563 Q87SR9_nD1 304.8.1 1-80 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002993564 Q87SR9_nD2 304.8.1 81-155 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002993565 Q87IC0_nD1 2006.1.6 11-35,61-320 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002993566 Q87GZ0_nD2 2007.2.5 146-275 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993567 Q87GZ0_nD1 2007.2.5 1-145 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993568 Q87NE0_nD1 139.2.1 47-180 'Di-heme elbow motif' 'Di-heme elbow motif' 'Multiheme cytochromes' 'few secondary structure elements' 002993569 Q87FI7_nD1 3479.1.1 6-40 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'Histidine kinase receptor QseC membrane domain' 'extended segments' 002993570 P40606_nD3 192.15.1 241-315 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002993571 P40606_nD2 230.5.1 61-205 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002993572 P40606_nD1 3529.1.1 21-60 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'beta sandwiches' 002993573 Q87SU5_nD1 141.1.1 6-333 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002993574 Q87FV4_nD2 5050.1.1 191-395 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993575 Q87FV4_nD1 5050.1.1 1-190 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993576 Q87JG9_nD1 2007.2.5 16-115 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993577 Q87N40_nD5 UNASSIGNED 351-385 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002993578 Q87N40_nD2 304.48.1 1-20,71-165 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993579 Q87N40_nD1 850.1.1 21-70 'Hypothetical protein Ta1206-like' 'Hypothetical protein Ta1206-like' 'Hypothetical protein Ta1206-like' 'a+b three layers' 002993580 Q87N40_nD6 270.2.1 403-465 'lantibiotic immunity protein SpaI' 'lantibiotic immunity protein SpaI' 'FMT C-terminal domain-like' 'beta barrels' 002993581 Q87N40_nD4 302.1.1 226-335 'Lesion bypass DNA polymerase (Y-family), little finger domain' 'Lesion bypass DNA polymerase (Y-family), little finger domain' 'Reverse ferredoxin' 'a+b two layers' 002993582 Q87N40_nD3 102.1.1 166-225 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002993583 Q87JP4_nD1 2005.1.1 1-225 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993584 Q87JP4_nD2 182.1.1 216-514 'Cryptochrome/photolyase FAD-binding domain' 'Cryptochrome/photolyase FAD-binding domain-related' 'Cryptochrome/photolyase FAD-binding domain-related' 'alpha complex topology' 002993585 Q87P55_nD1 109.4.1 1-114 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993586 Q87NN4_nD1 159.1.2 6-80 'MazG-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002993587 Q87R17_nD4 247.1.1 486-745 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002993588 Q87R17_nD3 5001.1.1 186-465 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002993589 Q87R17_nD1 3236.1.1 6-70 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002993590 Q87R17_nD2 2.1.1 71-180 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993591 Q79YX7_nD2 3454.1.1 363-435 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'GspC HR domain/PilP-like' 'beta barrels' 002993592 Q79YX7_nD1 2004.1.1 1-128,162-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993593 Q87I38_nD1 136.1.1 16-430 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'alpha complex topology' 002993594 Q87I38_nD2 136.1.1 436-724 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'alpha complex topology' 002993595 Q87PQ7_nD2 246.2.1 126-190,251-269,296-645 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002993596 Q87PQ7_nD1 11.1.1 11-125 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993597 Q87LL3_nD3 304.39.1 186-288 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Mechanosensitive channel protein MscS (YggB), C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002993598 Q87LL3_nD2 4.1.1 121-185 'SH3' 'SH3' 'SH3' 'beta barrels' 002993599 Q87LL3_nD1 5058.1.1 31-115 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002993600 Q87QW7_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993601 Q87QW7_nD2 101.1.2 136-235 'winged' 'HTH' 'HTH' 'alpha arrays' 002993602 Q87M61_nD1 12.3.1 1-343 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002993603 Q87I90_nD2 101.1.1 206-270 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993604 Q87I90_nD1 2007.1.1 6-205 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993605 Q87I90_nD3 101.1.1 271-320 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993606 Q87RH3_nD1 2007.1.14 16-320 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993607 Q87L82_nD1 866.1.1 1-153 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002993608 Q87JH4_nD1 192.29.1 23-85 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'Long alpha-hairpin' 'alpha bundles' 002993609 Q87JE9_nD1 211.1.1 6-115 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002993610 Q87RC8_nD1 7579.1.1 1-284 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002993611 Q87P16_nD1 3477.1.1 28-65 'ExsE' 'ExsE' 'ExsE' 'extended segments' 002993612 Q87JW2_nD1 2003.6.1 6-280 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002993613 Q87GM9_nD1 101.1.2 6-138 'winged' 'HTH' 'HTH' 'alpha arrays' 002993614 Q87KD9_nD3 375.1.1 111-150 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993615 Q87KD9_nD4 375.1.1 151-189 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993616 Q87KD9_nD1 375.1.1 21-55 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993617 Q87KD9_nD2 375.1.1 61-100 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002993618 Q87IS2_nD1 213.1.1 6-140 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993619 Q87PK4_nD1 2004.1.1 1-230 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993620 Q87K84_nD1 109.4.1 26-220 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993621 Q87P76_nD3 64.3.1 391-435 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002993622 Q87P76_nD4 64.3.1 461-515 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002993623 Q87P76_nD1 1.1.5 36-265 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993624 Q87P76_nD2 11.1.1 271-385 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993625 Q87JN0_nD1 221.4.1 1-179 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002993626 Q87HY1_nD2 7523.1.1 131-255 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993627 Q87HY1_nD1 7523.1.1 21-130,256-315 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993628 Q87HY1_nD3 6157.1.1 316-430 'GKAP homology domain 1' 'GKAP homology domain 1' 'GKAP homology domain 1' 'alpha bundles' 002993629 Q87FY6_nD3 298.4.1 126-235 'V-type ATPase subunit E' 'V-type ATPase subunit E' 'FwdE/GAPDH domain-like' 'a+b two layers' 002993630 Q87FY6_nD2 3464.1.1 76-110 'Helical region in V-type proton ATPase subunit E' 'Helical region in V-type proton ATPase subunit E' 'Helical region in V-type proton ATPase subunit E' 'extended segments' 002993631 Q87FY6_nD1 7519.1.1 46-75 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'ATP synthase (F1-ATPase), gamma subunit' 'a/b three-layered sandwiches' 002993632 Q87TK2_nD1 101.1.2 11-100 'winged' 'HTH' 'HTH' 'alpha arrays' 002993633 Q87TK2_nD2 7523.1.1 101-310 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993634 Q87J31_nD1 5065.1.1 6-340 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002993635 Q87QQ3_nD1 2005.1.1 11-335 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993636 Q87LY4_nD1 80.1.1 6-110 'HesB-like domain' 'HesB-like domain' 'HesB-like domain' 'beta complex topology' 002993637 Q87P66_nD1 605.1.1 16-75 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002993638 Q87P66_nD2 3843.1.1 86-155 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'NADH-quinone oxidoreductase subunit K' 'alpha complex topology' 002993639 Q87GR3_nD1 633.7.1 6-148 'Bacillus cereus metalloprotein-like' 'Bacillus cereus metalloprotein-like' 'Bromodomain-like' 'alpha bundles' 002993640 Q87KW9_nD2 327.7.1 211-300 'Cation efflux protein cytoplasmic domain-like' 'Cation efflux protein cytoplasmic domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993641 Q87KW9_nD1 5082.1.1 6-210 'Cation efflux protein transmembrane domain-like' 'Cation efflux protein transmembrane domain-like' 'Cation efflux protein transmembrane domain-like' 'alpha bundles' 002993642 Q87JG0_nD2 191.1.1 71-175 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002993643 Q87JG0_nD1 101.1.1 1-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993644 Q87KG8_nD2 101.1.1 166-265 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993645 Q87KG8_nD1 10.12.1 6-165 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002993646 Q87P43_nD1 4336.1.1 11-225 'YheA/YmcA-like' 'YheA/YmcA-like' 'YheA/YmcA-like' 'alpha duplicates or obligate multimers' 002993647 Q87P43_nD2 4104.1.1 226-345 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'EscU C-terminal domain-like' 'beta sandwiches' 002993648 P66368_nD1 2484.1.1 16-125 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993649 Q87I32_nD1 211.1.1 1-65 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002993650 Q87I32_nD2 211.1.1 66-125 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002993651 Q87RG4_nD1 2005.1.1 11-260 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993652 Q87RG4_nD2 239.1.1 341-455 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'beta barrels' 002993653 Q87RG4_nD3 239.1.1 261-340,456-555 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'beta barrels' 002993654 Q87HR9_nD1 214.1.1 1-50 'SH2' 'SH2' 'SH2' 'a+b two layers' 002993655 Q87HR9_nD2 223.2.1 71-120 'profilin-like' 'profilin-like' 'Profilin-like' 'a+b three layers' 002993656 Q87KD6_nD1 101.15.1 36-90 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002993657 Q87KD6_nD2 1.1.7 136-230 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993658 Q87KD6_nD3 1.1.7 246-355 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993659 P40609_nD2 1.1.7 151-250 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993660 P40609_nD1 106.1.1 1-150 'Globin-like' 'Globin-like' 'Globin-like' 'alpha arrays' 002993661 P40609_nD3 7514.1.1 251-390 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002993662 Q877N6_nD1 6169.1.1 6-35 'Transmembrane segment of lysosome-associated membrane glycoprotein 2' 'Transmembrane segment of lysosome-associated membrane glycoprotein 2' 'Transmembrane segment of lysosome-associated membrane glycoprotein 2' 'extended segments' 002993663 Q87JH5_nD1 2002.1.1 1-335 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993664 Q87M76_nD1 5050.1.1 36-250 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993665 Q87M76_nD2 5050.1.1 266-460 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993666 Q87NV3_nD3 101.1.1 221-270 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993667 Q87NV3_nD2 101.1.1 171-220 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993668 Q87NV3_nD1 10.12.1 1-170 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002993669 Q87TI4_nD4 4004.1.1 356-545 'NAD kinase beta sandwich domain-like' 'NAD kinase beta sandwich domain-like' 'NAD kinase beta sandwich domain-like' 'beta sandwiches' 002993670 Q87TI4_nD3 2007.1.4 236-355 'Phosphofructokinase N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993671 Q87TI4_nD1 6072.1.1 1-70 'Transmembrane domain of envelope protein E' 'Transmembrane domain of envelope protein E' 'Transmembrane domain of envelope protein E' 'alpha arrays' 002993672 Q87TI4_nD2 2007.2.3 71-235 '(Phosphotyrosine protein) phosphatases II' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993673 Q87QL3_nD2 148.1.3 211-275 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002993674 Q87QL3_nD1 2004.1.1 11-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993675 Q87QL3_nD3 101.1.1 276-315 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993676 Q87RF8_nD4 331.2.1 441-545 'Phosphoglucomutase, C-terminal domain' 'Phosphoglucomutase, C-terminal domain' 'TBP-like' 'a+b two layers' 002993677 Q87RF8_nD3 7528.1.1 321-440 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002993678 Q87RF8_nD1 7528.1.1 1-205 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002993679 Q87RF8_nD2 7528.1.1 206-320 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002993680 Q87J70_nD1 10.12.1 6-160 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002993681 Q87MU3_nD3 3967.1.1 261-335 'Mitoribosomal protein mS26' 'Mitoribosomal protein mS26' 'Mitoribosomal protein mS26' 'extended segments' 002993682 Q87MU3_nD1 101.1.2 11-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002993683 Q87MU3_nD2 192.8.1 111-260 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002993684 Q87J66_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002993685 Q87J66_nD2 7523.1.1 81-160,276-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993686 Q87J66_nD3 7523.1.1 131-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993687 Q87RU2_nD1 301.2.1 6-140 'PurM N-terminal domain-like' 'PurM N-terminal domain-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002993688 Q87RU2_nD2 304.111.1 141-315 'PurM C-terminal domain-like' 'PurM C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993689 Q87LA8_nD3 327.16.1 141-160,206-270 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993690 Q87LA8_nD4 327.16.1 271-310,331-380,401-525 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993691 Q87LA8_nD2 3070.1.1 161-200 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002993692 Q87LA8_nD1 3070.1.1 71-140 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002993693 Q87KI9_nD3 330.4.1 231-305 'Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain' 'Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain' 'dsRBD-like' 'a+b two layers' 002993694 Q87KI9_nD1 7523.1.1 6-100,201-230 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993695 Q87KI9_nD2 7523.1.1 101-200 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993696 Q87QK0_nD1 75.1.1 1-164 'Cyclophilin-like' 'Cyclophilin-like' 'Cyclophilin-like' 'beta barrels' 002993697 Q87RT6_nD1 304.120.1 1-80 'Ferredoxin-like domain in ThiI' 'Ferredoxin-like domain in ThiI' 'Alpha-beta plaits' 'a+b two layers' 002993698 Q87RT6_nD2 4143.1.1 81-175 'THUMP domain-like' 'THUMP domain-like' 'THUMP domain-like' 'a+b two layers' 002993699 Q87RT6_nD3 2005.1.1 176-395 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993700 Q87RT6_nD4 2007.2.5 396-480 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993701 Q87GS9_nD1 5051.1.1 6-420 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002993702 Q87S77_nD1 164.1.1 6-85 'Chorismate mutase II' 'Chorismate mutase II' 'Chorismate mutase II' 'alpha bundles' 002993703 Q87S77_nD2 2003.1.1 91-250 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993704 Q87S77_nD3 129.1.1 251-375 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002993705 Q87NU6_nD2 7524.1.1 256-460 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002993706 Q87NU6_nD1 7524.1.1 6-255,446-475 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002993707 Q87II6_nD2 7581.1.1 271-408 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002993708 Q87II6_nD1 7581.1.1 6-270 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002993709 Q87K60_nD1 2003.1.7 1-260 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993710 Q87LA5_nD2 2484.1.1 161-305 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993711 Q87LA5_nD1 2484.1.1 1-160 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993712 Q87LA5_nD4 310.3.1 366-475 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002993713 Q87LA5_nD3 3939.1.1 306-340 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002993714 Q87FT2_nD1 213.1.1 6-160 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993715 Q87RD3_nD1 304.8.1 1-80 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002993716 Q87RD3_nD2 7571.1.1 81-275 'Formyltransferase' 'Formyltransferase' 'Formyltransferase' 'a/b three-layered sandwiches' 002993717 Q87ML4_nD1 2485.1.1 31-180 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002993718 Q87IZ0_nD1 2005.1.1 1-140 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993719 Q87K37_nD2 1075.5.1 226-445 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993720 Q87K37_nD1 1075.5.1 11-225 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993721 Q87QJ2_nD1 5048.1.1 6-280 'Aquaporin-like' 'Aquaporin-like' 'Aquaporin-like' 'alpha complex topology' 002993722 Q87R31_nD1 7503.1.1 36-190 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002993723 Q87HU8_nD1 378.1.1 1-110 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002993724 Q87HU8_nD2 4.1.1 116-185 'SH3' 'SH3' 'SH3' 'beta barrels' 002993725 Q87HG2_nD1 5050.1.1 21-195 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993726 Q87HG2_nD2 159.1.2 196-235 'MazG-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002993727 Q87NM7_nD1 601.15.1 21-210 'Proteasome activator reg(alpha)' 'Proteasome activator reg(alpha)' 'Four-helical up-and-down bundle' 'alpha bundles' 002993728 Q87II5_nD2 7524.1.1 251-470 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002993729 Q87II5_nD1 7524.1.1 1-250,471-490 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002993730 Q87KW6_nD5 225.1.1 316-465 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002993731 Q87KW6_nD2 223.1.1 41-180 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002993732 Q87KW6_nD1 605.1.1 11-40 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002993733 Q87KW6_nD4 605.1.1 246-310 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002993734 Q87KW6_nD3 4168.1.1 181-245 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002993735 Q87KN2_nD2 4.11.1 71-205 'LexA/Signal peptidase' 'LexA/Signal peptidase' 'SH3' 'beta barrels' 002993736 Q87KN2_nD1 101.1.2 6-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002993737 Q79YW3_nD1 3755.1.1 6-120 'Putative type III secretion protein YscO-related' 'Putative type III secretion protein YscO-related' 'YscO-like' 'alpha bundles' 002993738 Q87MR6_nD1 101.1.11 1-95 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002993739 Q87JM5_nD3 1.1.7 41-55,216-310 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993740 Q87JM5_nD4 1.1.7 31-40,311-380 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993741 Q87JM5_nD2 325.1.7 56-90,181-215 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993742 Q87JM5_nD1 5086.1.1 91-180 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002993743 Q87TM8_nD1 2004.1.1 6-670 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993744 Q87KE5_nD1 4152.1.1 6-85 'Shew3726-like' 'Shew3726-like' 'Shew3726-like' 'a+b two layers' 002993745 Q87QD1_nD1 5084.5.3 46-660 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993746 Q87SK0_nD2 316.1.1 1-285,451-815 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002993747 Q87SK0_nD1 601.7.1 291-440 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002993748 Q87SK0_nD3 601.7.1 816-945 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002993749 Q87IE7_nD1 5065.1.1 1-315 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002993750 Q87KJ3_nD2 1.1.7 1-30,286-415 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993751 Q87KJ3_nD1 2002.1.1 31-285 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993752 Q87NJ1_nD1 873.1.1 1-179 'H-NOX domain' 'H-NOX domain' 'H-NOX domain' 'a+b complex topology' 002993753 Q87K77_nD3 4.8.1 216-260 'Chromo domain-like' 'Chromo domain-like' 'SH3' 'beta barrels' 002993754 Q87K77_nD1 2007.1.3 1-150 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993755 Q87K77_nD2 4.8.1 156-215 'Chromo domain-like' 'Chromo domain-like' 'SH3' 'beta barrels' 002993756 Q87IF0_nD2 101.1.2 146-225 'winged' 'HTH' 'HTH' 'alpha arrays' 002993757 Q87IF0_nD1 10.12.1 11-145 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002993758 Q87GN2_nD2 5050.1.1 196-404 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993759 Q87GN2_nD1 5050.1.1 6-190 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002993760 Q87JS6_nD1 1.1.1 6-140 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993761 Q87QL2_nD3 304.5.1 221-298 'GlnB-like' 'GlnB-like' 'Alpha-beta plaits' 'a+b two layers' 002993762 Q87QL2_nD1 7523.1.1 1-100,191-220 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993763 Q87QL2_nD2 7523.1.1 101-190 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993764 Q87M06_nD1 212.1.1 6-145 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002993765 Q87M06_nD6 327.11.2 551-620 'Eukaryotic type KH-domain (KH-domain type I)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993766 Q87M06_nD5 245.1.1 461-550 'Ribonuclease PH domain 2' 'Ribonuclease PH domain 2' 'Ribonuclease PH domain 2-like' 'a+b two layers' 002993767 Q87M06_nD2 245.1.1 146-235 'Ribonuclease PH domain 2' 'Ribonuclease PH domain 2' 'Ribonuclease PH domain 2-like' 'a+b two layers' 002993768 Q87M06_nD4 212.1.1 326-460 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002993769 Q87M06_nD7 2.1.1 621-705 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993770 Q87M06_nD3 101.11.1 236-325 'Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3' 'Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3' 'HTH' 'alpha arrays' 002993771 Q87IT0_nD1 5084.5.1 21-323 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002993772 Q87HB1_nD1 66.1.1 6-110 'ISP domain' 'ISP domain' 'ISP domain' 'beta sandwiches' 002993773 Q87T76_nD2 7512.1.1 156-345 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002993774 Q87T76_nD1 7512.1.1 1-155 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002993775 Q87J88_nD2 7523.1.1 91-160,261-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993776 Q87J88_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002993777 Q87J88_nD3 7523.1.1 161-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993778 Q87IN2_nD1 2003.1.5 1-195 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993779 Q87SR2_nD1 304.133.1 36-145 '26 kDa periplasmic immunogenic protein' '26 kDa periplasmic immunogenic protein' 'Alpha-beta plaits' 'a+b two layers' 002993780 Q87KF4_nD1 2002.1.1 1-255 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993781 Q87H56_nD2 282.1.1 271-390 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002993782 Q87H56_nD1 2004.1.1 1-270 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993783 Q87P80_nD1 2005.1.1 1-225 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002993784 Q87FD8_nD2 2007.6.1 81-283 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993785 Q87FD8_nD1 101.1.1 1-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002993786 Q87J39_nD1 9.1.1 71-160 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002993787 Q87NM3_nD2 1063.1.1 136-160 'Tegument protein U14' 'Tegument protein U14' 'Tegument protein U14' 'alpha complex topology' 002993788 Q87NM3_nD1 601.1.2 6-135,161-220 'I/LWEQ domain (Pfam 01608)' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002993789 Q87K11_nD1 5051.1.1 1-445,466-535,561-570 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002993790 Q87K11_nD2 2004.1.1 536-560 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993791 Q87SV4_nD1 2004.1.1 1-234 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993792 Q87QB9_nD1 2003.1.1 1-400 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993793 Q87HL7_nD1 5054.1.1 6-135 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002993794 Q87H66_nD1 324.1.1 1-155 'OsmC-like' 'OsmC-like' 'OsmC-like' 'a+b two layers' 002993795 Q87L50_nD1 7577.1.1 6-250 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002993796 Q87L50_nD2 3016.1.1 251-385 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002993797 Q87NE3_nD2 5069.1.1 166-500,596-620 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002993798 Q87NE3_nD1 5069.1.1 1-165 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002993799 Q87NE3_nD3 5090.1.1 501-595 'Viral glycoprotein, central and dimerisation domains' 'Viral glycoprotein, central and dimerisation domains' 'Viral glycoprotein, central and dimerisation domains-like' 'beta complex topology' 002993800 Q87G04_nD2 101.1.2 156-253 'winged' 'HTH' 'HTH' 'alpha arrays' 002993801 Q87G04_nD1 2007.1.3 16-155 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993802 Q87MV4_nD2 5000.3.1 121-200 'Bcl-2 inhibitors of programmed cell death' 'Bcl-2 inhibitors of programmed cell death' 'Toxins' membrane translocation domains' 'alpha arrays' 002993803 Q87MV4_nD1 601.4.1 1-120,201-260 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002993804 Q87MV4_nD3 601.3.1 311-429 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002993805 Q87TC6_nD1 4018.1.1 6-155 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b two layers' 002993806 Q87TC6_nD2 7587.1.1 156-275 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'a/b three-layered sandwiches' 002993807 Q87KH6_nD1 2485.1.1 6-108 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002993808 Q87T00_nD1 377.1.1 1-100 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002993809 Q87R00_nD1 2004.1.1 1-255 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993810 Q87RC1_nD1 235.1.1 21-323 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002993811 Q87N29_nD1 3227.1.1 6-385 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002993812 Q87N29_nD2 306.1.1 401-475 'Glucose permease domain IIB' 'Glucose permease domain IIB' 'Glucose permease domain IIB-like' 'a+b two layers' 002993813 Q87MU9_nD1 559.1.1 31-115 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'alpha duplicates or obligate multimers' 002993814 Q87LZ7_nD1 7528.1.1 6-155 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002993815 Q87LZ7_nD2 7528.1.1 156-255 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002993816 Q87LZ7_nD3 7528.1.1 256-370 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'Phosphoglucomutase, first 3 domains' 'a/b three-layered sandwiches' 002993817 Q87LZ7_nD4 331.2.1 371-445 'Phosphoglucomutase, C-terminal domain' 'Phosphoglucomutase, C-terminal domain' 'TBP-like' 'a+b two layers' 002993818 Q87R68_nD1 7579.1.1 6-264 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002993819 Q87IK5_nD1 2002.1.1 11-400 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993820 Q87QC6_nD2 331.3.1 326-485 'Bet v1-like' 'Bet v1-like' 'TBP-like' 'a+b two layers' 002993821 Q87QC6_nD1 2003.1.1 1-325 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993822 Q87I80_nD1 5106.1.1 1-30 'PetG subunit of the cytochrome b6f complex' 'PetG subunit of the cytochrome b6f complex' 'PetG subunit of the cytochrome b6f complex' 'extended segments' 002993823 Q87I80_nD5 4207.1.1 261-288 'RNA polymerase II holoenzyme component SRB7 (MED21)' 'Mediator hinge subcomplex-like' 'Mediator hinge subcomplex-like' 'alpha duplicates or obligate multimers' 002993824 Q87I80_nD2 532.2.1 51-80 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002993825 Q87I80_nD4 5060.2.1 131-260 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002993826 Q87I80_nD3 603.1.1 81-130 't-snare proteins' 't-snare proteins' 'STAT-like' 'alpha bundles' 002993827 Q79YZ5_nD4 304.24.1 396-485 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993828 Q79YZ5_nD3 304.24.1 306-395 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002993829 Q79YZ5_nD1 2004.1.1 6-200 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993830 Q79YZ5_nD5 6045.1.1 486-605 'C-terminal domain of BipA' 'C-terminal domain of BipA' 'C-terminal domain of BipA' 'a+b complex topology' 002993831 Q79YZ5_nD2 1.1.7 201-305 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993832 Q87KB4_nD2 7523.1.1 91-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993833 Q87KB4_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002993834 P66346_nD1 304.44.1 6-103 'Ribosomal protein S10' 'Ribosomal protein S10' 'Alpha-beta plaits' 'a+b two layers' 002993835 Q87N46_nD1 101.17.1 1-55,76-90 'IHF-like DNA-binding proteins' 'IHF-like DNA-binding proteins' 'HTH' 'alpha arrays' 002993836 Q87GA0_nD1 109.1.1 1-200 'Glutathione S-transferase (GST)-C' 'Glutathione S-transferase (GST)-C' 'Repetitive alpha hairpins' 'alpha superhelices' 002993837 Q87RK5_nD1 3747.1.1 1-70,606-645 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002993838 Q87RK5_nD2 601.52.1 71-335,416-435,541-605 'Flagellar hook-associated protein 1 helical domain' 'Flagellar hook-associated protein 1 helical domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002993839 Q87RK5_nD3 3943.1.1 336-415 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'beta sandwiches' 002993840 Q87RK5_nD4 3943.1.1 436-540 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'beta sandwiches' 002993841 Q87L66_nD3 327.16.1 251-320 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993842 Q87L66_nD4 327.16.1 321-575 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993843 Q87L66_nD1 319.3.1 36-140 'B2 domain of PilQ' 'B2 domain of PilQ' 'HSP20-like' 'beta sandwiches' 002993844 Q87L66_nD2 3070.1.1 156-230 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002993845 Q87MI9_nD1 101.1.2 6-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002993846 Q87LZ3_nD1 328.4.1 1-98 'YhbY-like' 'YhbY-like' 'IF3-like' 'a+b two layers' 002993847 Q87IF6_nD1 2484.1.1 1-205 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993848 Q87IF6_nD2 2484.1.1 206-445 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993849 Q87LX3_nD2 2484.1.1 116-270 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993850 Q87LX3_nD1 2484.1.1 1-110 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993851 Q87P84_nD1 5085.1.1 21-435 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002993852 Q87KM1_nD1 181.1.1 101-190 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G proteins-like' 'alpha bundles' 002993853 Q87KM1_nD2 2004.1.1 191-400 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993854 Q87J20_nD1 284.1.1 1-93 'FKBP-like' 'FKBP-like' 'FKBP-like' 'a+b two layers' 002993855 Q87NR7_nD1 3227.1.1 46-70 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002993856 Q87NR7_nD2 101.35.1 71-155 'DNA repair regulatory protein RecX' 'DNA repair regulatory protein RecX' 'HTH' 'alpha arrays' 002993857 Q87LN6_nD2 5058.1.1 81-135 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002993858 Q87LN6_nD1 2.1.1 1-75 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993859 Q87FX4_nD5 3254.1.1 501-585 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'helical domain in flagellar biosynthesis protein flhA' 'alpha arrays' 002993860 Q87FX4_nD2 109.4.1 281-325 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993861 Q87FX4_nD6 3255.1.1 591-695 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b domain in flagellar biosynthesis protein flhA' 'a/b three-layered sandwiches' 002993862 Q87FX4_nD1 UNASSIGNED 21-265 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002993863 Q87FX4_nD4 3253.1.1 431-480 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'ferredoxin-like domain in flagellar biosynthesis protein flhA' 'a+b two layers' 002993864 Q87FX4_nD3 2485.1.1 346-430,481-500 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002993865 Q87M51_nD1 3226.1.1 1-375 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002993866 Q87PY5_nD2 304.25.1 251-315,336-410 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002993867 Q87PY5_nD1 2011.1.1 41-250,411-509 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002993868 Q87PU6_nD5 327.7.1 231-240,451-575 'Cation efflux protein cytoplasmic domain-like' 'Cation efflux protein cytoplasmic domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993869 Q87PU6_nD2 11.1.5 131-215,241-290 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993870 Q87PU6_nD1 5063.1.1 6-60 'Photosystem I reaction center subunit X, PsaK' 'Photosystem I reaction center subunit X, PsaK' 'Photosystem I reaction center subunit X, PsaK' 'alpha bundles' 002993871 Q87PU6_nD4 11.1.5 296-410 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993872 Q87PU6_nD3 1.16.1 81-130,411-440 'Baseplate wedge protein gp6 domain I' 'Baseplate wedge protein gp6 domain I' 'cradle loop barrel' 'beta barrels' 002993873 Q87R58_nD1 5086.1.1 96-150 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002993874 Q87R58_nD2 325.1.7 56-95,151-190 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993875 Q87R58_nD3 1.1.7 46-55,191-265 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993876 Q87R58_nD4 1.1.7 31-45,271-340 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993877 Q87J27_nD1 272.1.1 166-245 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'TolA/TonB C-terminal domain' 'a+b two layers' 002993878 Q87NV2_nD1 1.1.7 1-85 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993879 Q87NV2_nD2 309.1.2 86-213 'ThrRS/AlaRS editing domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002993880 Q87K87_nD2 4007.1.1 81-130,206-238 'a+b domain in YebC-like proteins' 'a+b domain in YebC-like proteins' 'a+b domain in YebC-like proteins' 'a+b two layers' 002993881 Q87K87_nD1 4003.1.1 1-75 'Helical bundle domain in YebC-like proteins' 'Helical bundle domain in YebC-like proteins' 'Helical bundle domain in YebC-like proteins' 'alpha arrays' 002993882 Q87K87_nD3 304.117.1 131-200 'Ferredoxin-like domain in YebC' 'Ferredoxin-like domain in YebC' 'Alpha-beta plaits' 'a+b two layers' 002993883 Q87TJ6_nD1 2003.1.5 1-255 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993884 Q87H48_nD1 2003.1.1 1-245 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993885 Q87T88_nD2 2007.1.3 36-60 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993886 Q87T88_nD1 316.1.1 1-30 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002993887 Q87LM5_nD1 2003.1.2 1-395 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993888 Q87M89_nD2 1.1.2 21-120,256-355 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993889 Q87M89_nD1 239.1.1 121-255 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'beta barrels' 002993890 Q87T66_nD1 2003.1.1 6-125,296-315 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993891 Q87T66_nD2 298.1.1 126-295,316-335 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002993892 Q87MF7_nD1 246.3.1 31-280 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002993893 Q87TE8_nD2 321.1.1 101-469 'Glutamine synthetase/guanido kinase' 'Glutamine synthetase/guanido kinase' 'Glutamine synthetase-like' 'a+b two layers' 002993894 Q87TE8_nD1 239.4.1 1-100 'Glutamine synthetase, N-terminal domain' 'Glutamine synthetase, N-terminal domain' 'Ribosomal protein L25-like' 'beta barrels' 002993895 Q87M16_nD1 7557.1.1 36-130 'DNA polymerase III psi subunit' 'DNA polymerase III psi subunit' 'DNA polymerase III psi subunit' 'a/b three-layered sandwiches' 002993896 Q87QY7_nD2 7510.1.1 6-160,566-740 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002993897 Q87QY7_nD1 7510.1.1 166-560 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'Isocitrate/Isopropylmalate dehydrogenase-like' 'a/b three-layered sandwiches' 002993898 Q87FH3_nD1 2002.1.1 6-470 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993899 Q87KU4_nD2 206.1.3 111-330 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002993900 Q87KU4_nD1 2003.1.10 1-110 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993901 Q87KU4_nD3 325.1.1 331-445 'CO dehydrogenase molybdoprotein N-domain-like' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993902 Q87SX2_nD3 1075.1.2 1-45,286-419 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993903 Q87SX2_nD2 304.128.1 46-105,236-285 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002993904 Q87SX2_nD1 1.1.2 106-210 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002993905 Q87HM7_nD1 7577.1.1 1-325 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002993906 Q87HM7_nD2 3016.1.1 326-395 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002993907 Q87TC9_nD3 310.3.1 301-404 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002993908 Q87TC9_nD2 304.109.1 251-280 'Ribosomal proteins S24e, L23 and L15e' 'Ribosomal proteins S24e, L23 and L15e' 'Alpha-beta plaits' 'a+b two layers' 002993909 Q87TC9_nD1 2484.1.1 6-235 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993910 Q87HD1_nD1 2499.2.1 36-375 'Domain III of tail sheath protein Gp18' 'Domain III of tail sheath protein Gp18' 'Subtilisin-like' 'a/b three-layered sandwiches' 002993911 Q87HD1_nD2 283.2.1 376-495 'gpW/gp25-like' 'gpW/gp25-like' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002993912 Q87M94_nD1 2007.1.1 1-195 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993913 Q87MX1_nD1 5049.1.3 6-348 'Na(+)-translocating NADH-quinone reductase subunit B' 'Ammonium transporter-related' 'Ammonium transporter-related' 'alpha complex topology' 002993914 Q87R03_nD2 5051.1.1 461-505 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002993915 Q87R03_nD1 3226.1.1 32-460 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002993916 Q87M90_nD1 2003.1.9 6-269 'Activating enzymes of the ubiquitin-like proteins' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993917 Q87L99_nD1 7011.1.1 21-55,76-320,346-440 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002993918 Q87L99_nD2 109.4.1 41-75,321-340,441-585 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993919 Q87NB2_nD2 101.1.2 146-230 'winged' 'HTH' 'HTH' 'alpha arrays' 002993920 Q87NB2_nD1 10.12.1 6-145 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002993921 Q87HD3_nD1 109.4.1 1-90 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993922 Q87HD3_nD2 4.21.1 91-260 'ImpE-like' 'ImpE-like' 'SH3' 'beta barrels' 002993923 Q87JB6_nD1 3860.1.1 53-105 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002993924 Q87JB6_nD2 109.4.1 126-298 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993925 Q87FH5_nD1 3355.1.1 6-425 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002993926 Q87QI3_nD1 358.3.1 6-125 'Putative uncharacterized protein TTHA0547' 'Putative uncharacterized protein TTHA0547' 'SRCR-like' 'a+b complex topology' 002993927 Q87QH4_nD1 604.1.1 101-125 'Spectrin repeat' 'Spectrin repeat' 'Spectrin repeat-like' 'alpha bundles' 002993928 Q87N14_nD1 2.1.1 36-120 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993929 Q87N14_nD5 3617.1.1 401-505 'Thioredoxin-like domain in RNase E' 'Thioredoxin-like domain in RNase E' 'Thioredoxin-like domain in RNase E' 'a+b three layers' 002993930 Q87N14_nD2 212.1.1 121-210 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002993931 Q87N14_nD4 246.3.1 276-400 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002993932 Q87N14_nD3 2484.1.1 1-30,211-275 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002993933 Q87TR2_nD1 2004.1.1 1-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993934 Q87PT4_nD2 7097.1.1 116-180 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002993935 Q87PT4_nD1 7097.1.1 56-83,106-115 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002993936 Q87RN3_nD2 2003.1.5 81-285 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993937 Q87RN3_nD1 6056.1.1 6-80 'SP1917-like' 'SP1917-like' 'SP1917-like' 'alpha arrays' 002993938 Q87L21_nD1 213.1.1 1-270 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002993939 Q87L21_nD2 1.13.1 271-339 'Arginine N-succinyltransferase alpha chain C-terminal domain' 'Arginine N-succinyltransferase alpha chain C-terminal domain' 'cradle loop barrel' 'beta barrels' 002993940 Q87P42_nD3 7523.1.1 166-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993941 Q87P42_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002993942 Q87P42_nD2 7523.1.1 91-165,276-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002993943 Q87MI6_nD2 304.25.1 181-295 'Bacterial exopeptidase dimerisation domain' 'Bacterial exopeptidase dimerisation domain' 'Alpha-beta plaits' 'a+b two layers' 002993944 Q87MI6_nD1 2011.1.1 1-180,296-378 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002993945 Q87MH2_nD1 3226.1.1 1-395 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002993946 Q87MA4_nD2 2003.1.5 181-375 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993947 Q87MA4_nD1 2003.1.5 1-180 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993948 Q87TI8_nD1 3261.1.1 21-100 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002993949 Q87TI8_nD2 3261.1.1 106-183 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'amino-terminal domain of OmpATb' 'a+b two layers' 002993950 Q87SB9_nD2 2004.1.1 221-380 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993951 Q87SB9_nD1 2004.1.1 6-220 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993952 Q87LL7_nD1 304.133.1 41-145 '26 kDa periplasmic immunogenic protein' '26 kDa periplasmic immunogenic protein' 'Alpha-beta plaits' 'a+b two layers' 002993953 Q87LL7_nD2 304.133.1 26-40,146-230 '26 kDa periplasmic immunogenic protein' '26 kDa periplasmic immunogenic protein' 'Alpha-beta plaits' 'a+b two layers' 002993954 Q87I17_nD1 181.1.1 26-120 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G-proteins' 'Domain of the SRP/SRP receptor G proteins-like' 'alpha bundles' 002993955 Q87N45_nD6 2.1.1 441-555 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993956 Q87N45_nD1 2.1.1 16-85 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993957 Q87N45_nD2 2.1.1 91-180 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993958 Q87N45_nD5 2.1.1 351-440 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993959 Q87N45_nD3 2.1.1 181-265 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993960 Q87N45_nD4 2.1.1 266-350 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002993961 Q87LZ0_nD3 4019.1.1 56-75,281-350 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002993962 Q87LZ0_nD4 223.3.1 16-55,351-470 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002993963 Q87LZ0_nD2 4334.1.1 161-235 'Inserted beta sandwich domain in Dac-like proteins' 'Inserted beta sandwich domain in Dac-like proteins' 'Inserted beta sandwich domain in Dac-like proteins' 'beta complex topology' 002993964 Q87LZ0_nD1 2494.2.1 81-160,236-280 'Inserted a+b domain in Dac-like proteins' 'Inserted a+b domain in Dac-like proteins' 'DTD-like' 'a/b three-layered sandwiches' 002993965 Q87GE9_nD1 327.16.1 21-80 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993966 Q87GE9_nD2 327.13.1 86-175 'Ring-building motif I in type III secretion system' 'Ring-building motif I in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002993967 Q87FN5_nD2 109.4.1 221-265 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002993968 Q87FN5_nD1 10.1.2 21-205 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002993969 Q87SN0_nD2 640.2.1 91-120 'SidM C-terminal P4M domain' 'SidM C-terminal P4M domain' 'Methane monooxygenase hydrolase gamma subunit-like' 'alpha arrays' 002993970 Q87SN0_nD1 101.1.4 6-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002993971 Q87FQ1_nD1 11.1.5 26-145 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002993972 Q87GN4_nD2 298.1.1 131-255 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002993973 Q87GN4_nD1 2003.1.1 1-130,261-305 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993974 Q87MG1_nD1 2003.1.5 1-225 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002993975 Q87NG7_nD1 5084.2.1 36-220 'OMPT-like' 'OMPT-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002993976 Q87NR4_nD1 243.1.1 6-125 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002993977 Q87LG5_nD1 4953.1.1 1-115 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'L-aspartase C-terminal domain-like' 'alpha arrays' 002993978 Q87HK5_nD1 2007.2.5 1-134 'Rhodanese/Cell cycle control phosphatase' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993979 Q87S93_nD1 604.9.1 1-85 'Ribosomal protein S20' 'Ribosomal protein S20' 'Spectrin repeat-like' 'alpha bundles' 002993980 Q87HF6_nD2 148.1.3 226-320 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002993981 Q87HF6_nD1 2004.1.1 11-225 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993982 Q87HF6_nD3 3293.1.1 346-465 'LARA domain' 'LARA domain' 'LARA domain' 'beta barrels' 002993983 Q87HF6_nD4 603.1.1 321-345,466-553 't-snare proteins' 't-snare proteins' 'STAT-like' 'alpha bundles' 002993984 Q87G22_nD2 2004.1.1 266-540 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993985 Q87G22_nD1 2004.1.1 6-260 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002993986 Q87GB8_nD1 1075.3.1 6-295 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002993987 Q87IZ5_nD2 12.1.1 376-449 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002993988 Q87IZ5_nD1 2002.1.1 1-375 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993989 Q87S76_nD1 3939.1.1 41-110 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'XRCC4 C-terminal oligomerization domain' 'alpha duplicates or obligate multimers' 002993990 Q87S76_nD2 325.1.6 136-315 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002993991 Q87IY1_nD1 4.1.1 1-50 'SH3' 'SH3' 'SH3' 'beta barrels' 002993992 Q87PM0_nD2 866.1.1 136-323 'CheC-like' 'CheC-like' 'CheC-like' 'a+b duplicates or obligate multimers' 002993993 Q87PM0_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002993994 Q03476_nD1 5043.2.1 6-30 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002993995 Q03476_nD2 230.6.1 66-165 '40S ribosomal protein S3A C-terminal domain' '40S ribosomal protein S3A C-terminal domain' 'T-fold' 'a+b two layers' 002993996 Q87GY5_nD1 2002.1.1 1-315 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002993997 Q87NM6_nD1 101.1.11 26-95 'Ribbon-helix-helix' 'HTH' 'HTH' 'alpha arrays' 002993998 Q87ID5_nD2 5079.1.1 16-160,371-530 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'Magnesium transporter MgtE membrane domain' 'alpha duplicates or obligate multimers' 002993999 Q87ID5_nD1 604.5.1 6-15,166-355 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002994000 Q87ID5_nD3 604.5.1 536-715 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002994001 Q87PT0_nD1 6158.1.1 1-80 'Nucleoporin p58/p45 helical region' 'Nucleoporin p58/p45 helical region' 'Nucleoporin p58/p45 helical region' 'alpha bundles' 002994002 Q87PD7_nD1 2004.1.1 16-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994003 Q87KX0_nD1 2007.1.4 1-140,261-300 'Phosphofructokinase N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994004 Q87KX0_nD2 7572.1.1 141-260 'Phosphofructokinase C-terminal domain' 'Phosphofructokinase C-terminal domain' 'Phosphofructokinase C-terminal domain' 'a/b three-layered sandwiches' 002994005 Q87QQ5_nD1 3236.1.1 16-325 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002994006 Q87MN7_nD1 7581.1.1 1-250 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002994007 Q87MN7_nD2 7581.1.1 251-400 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002994008 Q87SF9_nD1 212.1.1 1-300 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002994009 Q87MZ8_nD1 2004.1.1 1-260 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994010 Q87P94_nD1 3890.1.1 16-220 'Transmembrane Bax inhibitor motif (TMBIM) proteins' 'Transmembrane Bax inhibitor motif (TMBIM) proteins' 'Transmembrane Bax inhibitor motif (TMBIM) proteins' 'alpha bundles' 002994011 Q87S64_nD1 288.1.1 6-240 'CNF1/YfiH-like putative cysteine hydrolases' 'CNF1/YfiH-like putative cysteine hydrolases' 'CNF1/YfiH-like putative cysteine hydrolases' 'a+b four layers' 002994012 Q87KQ2_nD1 304.60.1 1-160 'Ribosomal protein L10-like' 'Ribosomal protein L10-like' 'Alpha-beta plaits' 'a+b two layers' 002994013 Q87IY8_nD2 7579.1.1 51-140,481-754 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994014 Q87IY8_nD1 5.1.4 141-480 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002994015 Q87NW2_nD1 7523.1.1 36-155 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994016 Q87L62_nD2 2484.1.1 166-330 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994017 Q87L62_nD1 2484.1.1 1-165 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994018 Q87NJ6_nD1 5028.1.1 26-60 'Sec-beta subunit' 'Sec-beta subunit' 'Sec-beta subunit' 'extended segments' 002994019 Q87M59_nD1 312.1.1 6-85,106-345 'HIT-related' 'HIT-related' 'HIT-like' 'a+b three layers' 002994020 Q87JZ6_nD1 12.3.1 31-295 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002994021 Q87JZ6_nD2 109.2.1 296-895 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002994022 Q87P21_nD1 241.1.1 1-130 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002994023 Q87FU6_nD1 5054.1.1 16-230 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002994024 Q87FY8_nD1 3755.1.1 1-145 'Putative type III secretion protein YscO-related' 'Putative type III secretion protein YscO-related' 'YscO-like' 'alpha bundles' 002994025 Q87SK6_nD1 4.1.1 21-90 'SH3' 'SH3' 'SH3' 'beta barrels' 002994026 Q87SK6_nD2 192.8.1 91-160 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002994027 Q87SK6_nD3 7100.1.1 161-190 'Notch transmembrane helix' 'Notch transmembrane helix' 'Notch transmembrane helix' 'extended segments' 002994028 Q87RD2_nD2 2004.1.1 1-240,381-635 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994029 Q87RD2_nD1 3636.1.1 241-375 'XPD arch domain' 'XPD arch domain' 'XPD arch domain' 'a+b two layers' 002994030 Q87JX5_nD1 2006.1.1 11-164 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994031 Q79YX5_nD1 101.1.4 6-100 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002994032 Q87G39_nD1 109.4.1 1-525 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994033 Q87TH3_nD2 604.1.1 171-200 'Spectrin repeat' 'Spectrin repeat' 'Spectrin repeat-like' 'alpha bundles' 002994034 Q87TH3_nD1 268.1.1 6-115 'Sterol carrier protein, SCP-related' 'Sterol carrier protein, SCP-related' 'Sterol carrier protein-like' 'a+b two layers' 002994035 Q87LD9_nD2 7572.1.1 161-280 'Phosphofructokinase C-terminal domain' 'Phosphofructokinase C-terminal domain' 'Phosphofructokinase C-terminal domain' 'a/b three-layered sandwiches' 002994036 Q87LD9_nD1 2004.1.1 1-160 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994037 Q87L18_nD2 2.1.1 181-300 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994038 Q87L18_nD5 11.1.1 846-950 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994039 Q87L18_nD1 11.1.1 26-170 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994040 Q87L18_nD3 2.1.1 301-360,381-460 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994041 Q87L18_nD4 246.3.1 361-380,461-733,756-845 'DNase I-like' 'DNase I-like' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002994042 Q87HV8_nD1 315.1.1 6-45 'Tautomerase/MIF' 'Tautomerase/MIF' 'Tautomerase/MIF-like' 'a+b two layers' 002994043 Q87HV8_nD2 192.2.1 46-75 'Prefoldin' 'Prefoldin' 'Long alpha-hairpin' 'alpha bundles' 002994044 Q87KZ0_nD1 3860.1.1 16-50 'Myosin VI lever arm' 'Myosin VI lever arm' 'Myosin VI lever arm' 'alpha bundles' 002994045 Q87KZ0_nD2 3755.3.1 51-210 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002994046 Q87KZ0_nD3 325.1.6 231-368 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994047 Q87II8_nD3 633.6.1 241-385 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002994048 Q87II8_nD1 4033.1.1 6-125 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'alpha arrays' 002994049 Q87II8_nD2 4052.1.1 126-240 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'beta complex topology' 002994050 Q87QU8_nD2 102.1.1 66-145 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002994051 Q87QU8_nD1 2.1.1 1-65 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994052 Q87QU8_nD3 103.1.1 151-204 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C, UBA, CRAL/TRIO-N, HBS1' 'RuvA-C' 'alpha arrays' 002994053 Q87T34_nD3 2003.1.12 286-385 'UDPG/MGDP dehydrogenase C-terminal domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994054 Q87T34_nD1 2003.1.1 1-205 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994055 Q87T34_nD2 129.1.1 206-285 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002994056 P46235_nD2 211.1.1 71-130 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994057 P46235_nD1 211.1.1 6-70 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994058 Q87I93_nD1 2002.5.1 1-248 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002994059 Q87NW6_nD1 109.4.1 26-240 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994060 Q87LZ5_nD1 4263.2.1 31-95 'FtsH Periplasmic Domain' 'FtsH Periplasmic Domain' 'TTHA1528-like' 'a+b two layers' 002994061 Q87LZ5_nD2 2004.1.1 1-25,111-325 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994062 Q87LZ5_nD4 4070.1.1 401-605 'FtsH protease domain-like' 'FtsH protease domain-like' 'FtsH protease domain-like' 'alpha arrays' 002994063 Q87LZ5_nD3 148.1.3 326-400 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994064 Q87GL6_nD2 191.1.1 76-185 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002994065 Q87GL6_nD1 101.1.1 6-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994066 Q87SP4_nD1 3291.1.1 6-70 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002994067 Q87RS3_nD1 7523.1.1 31-110,226-269 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994068 Q87RS3_nD2 7523.1.1 111-225 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994069 Q87Q29_nD1 2003.1.1 1-348 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994070 Q87II1_nD1 2003.1.1 1-170 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994071 Q87II1_nD2 129.1.1 171-295 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002994072 Q87JZ3_nD2 7523.1.1 81-145,246-275 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994073 Q87JZ3_nD1 101.1.2 1-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002994074 Q87JZ3_nD3 7523.1.1 146-245 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994075 Q87IA2_nD3 4198.1.1 506-610 'TerB-like' 'TerB-like' 'TerB-like' 'alpha arrays' 002994076 Q87IA2_nD2 4198.1.1 381-495 'TerB-like' 'TerB-like' 'TerB-like' 'alpha arrays' 002994077 Q87IA2_nD1 2498.1.1 6-335 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002994078 Q87S78_nD1 2002.1.1 6-350 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994079 Q87MZ2_nD3 109.4.1 206-295,346-424 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994080 Q87MZ2_nD2 5001.1.1 146-205,311-330 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002994081 Q87MZ2_nD1 5067.1.1 1-145 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002994082 Q87S04_nD1 3543.1.1 6-190 'Acid-activated urea channel' 'Acid-activated urea channel' 'Acid-activated urea channel' 'alpha complex topology' 002994083 Q87R96_nD1 235.1.1 81-240 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002994084 Q87LP0_nD2 327.11.1 201-315 'Prokaryotic type KH domain (KH-domain type II)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994085 Q87LP0_nD1 2004.1.1 6-200 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994086 Q87IA3_nD1 5059.1.1 1-110 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002994087 Q87H96_nD1 109.4.1 26-635 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994088 Q87K82_nD1 2004.1.1 1-230 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994089 Q87N28_nD1 2002.1.1 1-255 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994090 Q87NH9_nD1 2.1.1 6-70 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994091 Q87J48_nD1 2011.1.1 21-305 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002994092 Q87PV8_nD1 148.1.2 1-160 'double Clp-N' 'Histone-related' 'Histone-like' 'alpha arrays' 002994093 Q87PV8_nD2 2004.1.1 166-355 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994094 Q87PV8_nD3 148.1.3 356-580,796-890 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994095 Q87PV8_nD4 2004.1.1 581-795 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994096 Q87K04_nD1 10.12.1 6-103 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994097 Q87J61_nD4 304.48.1 311-458 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994098 Q87J61_nD3 375.1.1 181-210,251-285 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994099 Q87J61_nD2 375.1.1 211-250 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994100 Q87J61_nD1 101.1.2 11-180,286-305 'winged' 'HTH' 'HTH' 'alpha arrays' 002994101 P59562_nD1 304.36.1 6-95 'YajQ-like' 'YajQ-like' 'Alpha-beta plaits' 'a+b two layers' 002994102 P59562_nD2 304.36.1 96-160 'YajQ-like' 'YajQ-like' 'Alpha-beta plaits' 'a+b two layers' 002994103 Q87GL1_nD1 2003.1.1 6-239 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994104 Q87PH9_nD1 5049.1.1 26-420 'Ammonium transporter' 'Ammonium transporter-related' 'Ammonium transporter-related' 'alpha complex topology' 002994105 Q87GI2_nD1 241.1.1 1-124 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002994106 Q87TB6_nD1 2007.1.3 6-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994107 Q87TB6_nD2 101.1.2 136-235 'winged' 'HTH' 'HTH' 'alpha arrays' 002994108 Q87I65_nD2 101.1.3 131-200 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002994109 Q87I65_nD1 2007.1.3 6-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994110 Q87JX2_nD1 213.1.1 6-170 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002994111 Q87K23_nD4 601.7.1 471-620 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002994112 Q87K23_nD3 316.1.1 276-470 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002994113 Q87K23_nD1 10.12.1 6-140 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994114 Q87K23_nD2 282.1.1 146-275 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002994115 Q87PG6_nD1 10.12.1 11-160 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994116 Q87PG6_nD2 101.1.2 161-245 'winged' 'HTH' 'HTH' 'alpha arrays' 002994117 Q87LQ3_nD1 301.5.1 1-158 '2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF' '2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF' 'Bacillus chorismate mutase-like' 'a+b three layers' 002994118 Q87S63_nD1 148.1.2 1-155 'double Clp-N' 'Histone-related' 'Histone-like' 'alpha arrays' 002994119 Q87S63_nD2 2004.1.1 161-340 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994120 Q87S63_nD5 148.1.3 766-855 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994121 Q87S63_nD3 148.1.3 341-545 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994122 Q87S63_nD4 2004.1.1 546-765 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994123 Q87R18_nD1 5086.1.1 31-165 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994124 Q87I57_nD1 7014.1.1 6-235 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002994125 Q87LZ1_nD1 5084.5.1 11-335 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002994126 Q87J76_nD2 101.1.2 86-130 'winged' 'HTH' 'HTH' 'alpha arrays' 002994127 Q87J76_nD1 327.11.2 6-80 'Eukaryotic type KH-domain (KH-domain type I)' 'KH-domains' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994128 Q87JI9_nD1 235.1.1 51-215 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002994129 Q87JI0_nD1 3747.1.1 1-65,416-455 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'Flagellar hook protein FlgE D0 domain' 'a+b two layers' 002994130 Q87JI0_nD2 601.52.1 66-415 'Flagellar hook-associated protein 1 helical domain' 'Flagellar hook-associated protein 1 helical domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002994131 Q87R36_nD3 2008.1.1 246-380 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002994132 Q87R36_nD2 101.1.2 161-245 'winged' 'HTH' 'HTH' 'alpha arrays' 002994133 Q87R36_nD1 7592.1.1 1-150 'CARF (CRISPR-associated Rossmann fold) domains' 'CARF (CRISPR-associated Rossmann fold) domains' 'CARF (CRISPR-associated Rossmann fold) domains' 'a/b three-layered sandwiches' 002994134 Q87T70_nD1 2002.1.1 1-285 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994135 Q87T70_nD2 70.3.1 291-355 'SET domain-like' 'SET domain-like' 'beta-clip' 'beta barrels' 002994136 Q87QT6_nD1 7588.1.1 16-110,301-345 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'a/b three-layered sandwiches' 002994137 Q87QT6_nD2 7588.1.1 111-200 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'a/b three-layered sandwiches' 002994138 Q87QT6_nD3 7588.1.1 201-300 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase' 'a/b three-layered sandwiches' 002994139 Q87MG9_nD1 7571.1.1 1-210 'Formyltransferase' 'Formyltransferase' 'Formyltransferase' 'a/b three-layered sandwiches' 002994140 Q87NV1_nD3 11.1.1 271-355 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994141 Q87NV1_nD4 11.1.1 356-440 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994142 Q87NV1_nD6 209.1.1 546-730 'C-type lectin-like' 'C-type lectin-like' 'C-type lectin-like' 'a+b complex topology' 002994143 Q87NV1_nD1 11.1.1 96-180 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994144 Q87NV1_nD2 11.1.1 186-270 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994145 Q87NV1_nD5 11.1.1 441-525 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994146 Q87K75_nD1 75.1.1 1-164 'Cyclophilin-like' 'Cyclophilin-like' 'Cyclophilin-like' 'beta barrels' 002994147 Q87P58_nD1 105.1.1 6-50 'HLH, helix-loop-helix DNA-binding domain' 'HLH, helix-loop-helix DNA-binding domain' 'HLH-like' 'alpha duplicates or obligate multimers' 002994148 Q87GS2_nD2 65.1.1 1-50,366-420 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'Composite domain of metallo-dependent hydrolases' 'beta sandwiches' 002994149 Q87GS2_nD1 2002.1.1 51-365 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994150 Q87TP8_nD1 304.20.1 1-220 'PAP/Archaeal CCA-adding enzyme, C-terminal domain' 'PAP/Archaeal CCA-adding enzyme, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002994151 Q87TP8_nD2 101.1.9 221-325 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002994152 Q87TP8_nD3 131.1.1 326-530 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002994153 Q87TP8_nD4 140.1.1 531-685 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002994154 Q87HM3_nD1 2002.1.1 1-150 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994155 Q87PE4_nD3 10.1.2 281-365 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002994156 Q87PE4_nD2 10.1.2 46-60,96-275 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002994157 Q87PE4_nD1 633.12.1 21-45 'Ta0600-like' 'Ta0600-like' 'Bromodomain-like' 'alpha bundles' 002994158 Q87Q11_nD1 601.1.1 6-145 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994159 Q87HI7_nD1 4979.1.1 1-130 'C-terminal domain of Hypothetical protein MPN330' 'C-terminal domain of Hypothetical protein MPN330' 'C-terminal domain of Hypothetical protein MPN330-like' 'alpha arrays' 002994160 Q87FE9_nD1 1.1.5 6-210 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994161 Q87JT1_nD2 7579.1.1 16-110,446-720 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994162 Q87JT1_nD1 5.1.4 111-445 '7-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002994163 Q87S51_nD4 300.1.1 501-695 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002994164 Q87S51_nD3 300.1.1 316-500 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002994165 Q87S51_nD2 4114.1.1 106-315 'PHP14-like' 'PHP14-like' 'PHP14-like' 'a+b two layers' 002994166 Q87S51_nD1 604.14.1 6-105 'PPK N-terminal domain-like' 'PPK N-terminal domain-like' 'Spectrin repeat-like' 'alpha bundles' 002994167 Q87ND5_nD1 2003.1.5 6-235 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994168 Q87RI1_nD1 304.5.1 1-110 'GlnB-like' 'GlnB-like' 'Alpha-beta plaits' 'a+b two layers' 002994169 Q87IM4_nD1 3294.1.1 6-70 'FAS type I helical domain' 'FAS type I helical domain' 'FAS type I helical domain' 'alpha complex topology' 002994170 Q87PV4_nD1 109.4.1 16-155 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994171 Q87QQ6_nD1 101.1.2 1-150 'winged' 'HTH' 'HTH' 'alpha arrays' 002994172 Q87IC5_nD3 109.4.1 236-245,451-765 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994173 Q87IC5_nD1 139.2.1 36-225,271-445 'Di-heme elbow motif' 'Di-heme elbow motif' 'Multiheme cytochromes' 'few secondary structure elements' 002994174 Q87IC5_nD2 109.4.1 246-270 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994175 Q87LJ4_nD1 4051.1.1 1-185 'a+b domain in Capz' 'a+b domain in Capz' 'a+b domain in Capz' 'a+b two layers' 002994176 Q87IQ0_nD1 304.48.1 21-260,281-470 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994177 Q87PW8_nD2 7523.1.1 106-190,291-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994178 Q87PW8_nD1 101.1.2 16-105 'winged' 'HTH' 'HTH' 'alpha arrays' 002994179 Q87PW8_nD3 7523.1.1 191-290 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994180 Q87RP6_nD1 2498.1.1 1-150 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002994181 Q87IQ1_nD1 2003.1.5 6-50 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994182 Q87HI9_nD3 101.1.1 241-295 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994183 Q87HI9_nD1 10.12.1 31-190 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994184 Q87HI9_nD2 101.1.1 191-240 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994185 Q87TH5_nD3 2008.1.1 181-410 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002994186 Q87TH5_nD4 601.7.1 411-440 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002994187 Q87TH5_nD2 192.8.1 71-170 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002994188 Q87TH5_nD5 3409.1.1 441-470 'Vacuolar protein sorting-associated protein 30 BARA domain' 'Vacuolar protein sorting-associated protein 30 BARA domain' 'Vacuolar protein sorting-associated protein 30 BARA domain' 'a+b duplicates or obligate multimers' 002994189 Q87TH5_nD1 5046.1.1 16-70 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002994190 Q87GA2_nD1 101.1.1 6-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994191 Q87GA2_nD2 191.1.1 71-195 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002994192 Q87HA5_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994193 Q87HA5_nD2 103.12.1 136-190 'ANTAR domain' 'ANTAR domain' 'RuvA-C' 'alpha arrays' 002994194 Q87JZ7_nD1 101.1.4 1-210,241-250 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002994195 Q87NK5_nD1 211.1.1 6-80 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994196 Q87NK5_nD2 211.1.1 81-135 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994197 Q87QJ6_nD1 2003.1.1 1-275 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994198 P22848_nD1 246.2.1 26-360 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002994199 P22848_nD2 805.1.1 366-550 '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' '5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain' 'a+b complex topology' 002994200 Q87RE4_nD2 2007.1.14 166-290 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994201 Q87RE4_nD1 2007.1.14 21-165 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994202 Q87JV9_nD1 512.1.1 6-30,51-220 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b two layers' 002994203 Q87JV9_nD2 3053.1.1 226-445 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'beta barrels' 002994204 Q87M43_nD1 283.2.1 16-90 'gpW/gp25-like' 'gpW/gp25-like' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002994205 Q87QD0_nD2 139.1.1 196-325 'Cytochrome c3-like' 'Cytochrome c3-like' 'Multiheme cytochromes' 'few secondary structure elements' 002994206 Q87QD0_nD1 139.2.1 41-195 'Di-heme elbow motif' 'Di-heme elbow motif' 'Multiheme cytochromes' 'few secondary structure elements' 002994207 Q87L87_nD1 6169.1.1 46-73 'Transmembrane segment of lysosome-associated membrane glycoprotein 2' 'Transmembrane segment of lysosome-associated membrane glycoprotein 2' 'Transmembrane segment of lysosome-associated membrane glycoprotein 2' 'extended segments' 002994208 Q87JY1_nD1 7500.1.1 46-265 'Glycerate kinase I (Pfam 02595) domain II' 'Glycerate kinase I (Pfam 02595) domain II' 'Glycerate kinase I (Pfam 02595) domain II' 'a/b three-layered sandwiches' 002994209 Q87JY1_nD2 2007.19.1 1-45,271-375 'Glycerate kinase I (Pfam 02595) domain I' 'Glycerate kinase I (Pfam 02595) domain I' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994210 Q87JW3_nD1 2004.1.1 6-245 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994211 Q87QA6_nD1 2007.1.3 1-160 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994212 Q87I78_nD1 283.1.1 6-165 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002994213 Q87R39_nD4 267.1.1 471-590 'Metal cation-transporting ATPase, ATP-binding domain' 'Metal cation-transporting ATPase, ATP-binding domain' 'Metal cation-transporting ATPase, ATP-binding domain' 'a+b complex topology' 002994214 Q87R39_nD3 5073.1.2 146-255,371-430,736-760 'Copper efflux ATPase transmembrane domain' 'Calcium ATPase transmembrane domain-related' 'Calcium ATPase transmembrane domain-related' 'alpha bundles' 002994215 Q87R39_nD5 2006.1.1 431-470,591-735 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994216 Q87R39_nD2 10.13.1 256-370 'Calcium ATPase, transduction domain A' 'Calcium ATPase, transduction domain A' 'jelly-roll' 'beta sandwiches' 002994217 Q87R39_nD1 304.3.1 71-135 'HMA, heavy metal-associated domain' 'HMA-related' 'Alpha-beta plaits' 'a+b two layers' 002994218 Q87QD9_nD1 239.1.1 1-90 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'beta barrels' 002994219 Q87HP4_nD1 2007.1.3 1-115 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994220 Q87HP4_nD2 101.1.2 116-220 'winged' 'HTH' 'HTH' 'alpha arrays' 002994221 Q87QD8_nD2 150.3.1 11-40,156-190 '4-helical cytokines' '4-helical cytokines' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002994222 Q87QD8_nD5 225.1.1 301-449 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994223 Q87QD8_nD1 223.1.1 41-155 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994224 Q87QD8_nD3 4168.1.1 191-250 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002994225 Q87QD8_nD4 605.1.1 251-295 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994226 Q87KV7_nD1 3681.1.1 6-85 'Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit' 'Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit' 'Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit' 'a+b complex topology' 002994227 Q87S95_nD1 101.1.2 1-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002994228 Q87S52_nD3 131.1.1 311-500 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002994229 Q87S52_nD2 2484.1.1 131-310 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994230 Q87S52_nD1 2484.1.1 6-130 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994231 Q87P08_nD2 298.1.1 186-490 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002994232 Q87P08_nD1 2003.1.1 6-185 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994233 Q87PT5_nD1 7097.1.1 16-110 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002994234 Q87PT5_nD2 7097.1.1 6-15,111-190 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'Uncharacterized protein MXAN_0049' 'a+b two layers' 002994235 Q87R47_nD1 101.1.7 1-100 'Methylated DNA-protein cysteine methyltransferase-C' 'HTH' 'HTH' 'alpha arrays' 002994236 Q87I53_nD1 180.1.1 11-183 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'Acid phosphatase/Vanadium-dependent haloperoxidase' 'alpha bundles' 002994237 Q87IU4_nD1 5051.1.1 16-55 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002994238 Q87IU4_nD2 3415.1.1 56-75,96-275,301-454 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002994239 Q87PJ9_nD4 4168.1.1 341-400 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002994240 Q87PJ9_nD3 223.1.1 51-60,206-325 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994241 Q87PJ9_nD5 605.1.1 441-515 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994242 Q87PJ9_nD2 223.1.1 61-205 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994243 Q87PJ9_nD6 225.1.1 516-670 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994244 Q87PJ9_nD1 3757.1.1 11-50,326-340 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002994245 Q87KH3_nD1 604.39.1 11-195 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002994246 Q87HI0_nD1 5048.1.1 6-265 'Aquaporin-like' 'Aquaporin-like' 'Aquaporin-like' 'alpha complex topology' 002994247 Q87MZ6_nD2 2007.1.2 146-260,291-315 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994248 Q87MZ6_nD1 2007.1.2 26-145,261-290 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994249 Q87NJ9_nD3 2004.1.1 196-375 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994250 Q87NJ9_nD4 148.1.3 376-455 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994251 Q87NJ9_nD2 223.1.1 76-195 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994252 Q87NJ9_nD5 101.1.1 456-510 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994253 Q87NJ9_nD1 304.8.1 1-75 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002994254 Q87LG7_nD1 2004.1.1 1-145 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994255 Q87FH4_nD1 2003.1.1 1-280 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994256 Q87FH4_nD2 129.1.1 286-488 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002994257 Q87GU7_nD1 325.1.7 41-80,196-230 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994258 Q87GU7_nD2 5086.1.1 101-170 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994259 Q87GU7_nD4 1.1.7 6-40,231-345 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994260 Q87GU7_nD3 5086.1.1 81-100,171-195 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994261 Q87GE8_nD1 192.29.1 16-85 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'Long alpha-hairpin' 'alpha bundles' 002994262 Q87GN7_nD1 3513.1.1 26-50,106-125 'Putative lipoprotein LppA' 'Putative lipoprotein LppA' 'Putative lipoprotein LppA' 'a+b two layers' 002994263 Q87TB9_nD5 1.1.1 491-620 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994264 Q87TB9_nD2 1.1.1 36-85,121-215 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994265 Q87TB9_nD1 4326.1.1 86-120 'ERH-like' 'ERH-like' 'ERH-like' 'a+b two layers' 002994266 Q87TB9_nD4 1.1.1 356-485 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994267 Q87TB9_nD3 1.1.1 216-355 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994268 Q87RA0_nD1 7581.1.1 6-190 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002994269 Q87IU1_nD1 708.1.2 6-130 'Mss4-like' 'ETN0001 domain-like' 'ETN0001 domain-like' 'beta complex topology' 002994270 Q87G63_nD2 2006.1.6 86-295 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994271 Q87G63_nD1 6002.1.1 11-30,56-80,301-325 'Protein P16' 'Protein P16' 'Protein P16' 'few secondary structure elements' 002994272 Q87R04_nD1 2500.1.1 1-758 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'Ten stranded beta/alpha barrel' 'a/b barrels' 002994273 Q87J24_nD1 1.1.5 6-170 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994274 Q87GR7_nD1 5050.1.1 1-200 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994275 Q87GR7_nD2 5050.1.1 201-415 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994276 Q87GR7_nD3 7558.1.1 416-615 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'Glycerol-3-phosphate (1)-acyltransferase' 'a/b three-layered sandwiches' 002994277 Q87P26_nD1 532.2.1 51-200 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002994278 Q87JT2_nD1 5084.5.1 16-349 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002994279 Q87J16_nD1 192.15.1 16-115 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002994280 Q87J16_nD2 101.1.2 116-200 'winged' 'HTH' 'HTH' 'alpha arrays' 002994281 Q87RJ5_nD1 331.7.1 181-315 'Cell-division protein ZipA, C-terminal domain' 'Cell-division protein ZipA, C-terminal domain' 'TBP-like' 'a+b two layers' 002994282 Q87RP1_nD1 4320.1.1 11-40 'Taf5 N-terminal domain-like' 'Taf5 N-terminal domain-like' 'Taf5 N-terminal domain-like' 'alpha superhelices' 002994283 Q87SZ4_nD1 2490.3.1 6-45,66-144 'Ribosomal proteins L15p and L18e' 'Ribosomal proteins L15p and L18e' 'Ribosomal protein L13/L15p/L18e/L32e' 'a/b three-layered sandwiches' 002994284 Q87QY3_nD1 4019.1.1 86-240 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002994285 Q87QY3_nD2 223.3.1 26-85,241-345 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002994286 Q87RX2_nD1 650.1.1 1-85 'Chaperone J-domain' 'Chaperone J-domain' 'Chaperone J-domain' 'alpha bundles' 002994287 Q87RX2_nD2 361.1.1 146-210 'DnaJ/Hsp40 cysteine-rich domain' 'DnaJ/Hsp40 cysteine-rich domain' 'DnaJ/Hsp40 cysteine-rich domain' 'few secondary structure elements' 002994288 Q87RX2_nD3 67.1.1 116-145,211-255 'HSP40/DnaJ peptide-binding domain' 'HSP40/DnaJ peptide-binding domain' 'HSP40/DnaJ peptide-binding domain' 'beta sandwiches' 002994289 Q87RX2_nD4 67.1.1 256-380 'HSP40/DnaJ peptide-binding domain' 'HSP40/DnaJ peptide-binding domain' 'HSP40/DnaJ peptide-binding domain' 'beta sandwiches' 002994290 Q87SX3_nD1 2.1.1 26-164 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994291 Q87IB8_nD1 2006.1.6 101-310 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994292 Q87IB8_nD2 6055.1.1 71-95,316-345 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002994293 Q87GC5_nD1 101.1.2 6-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002994294 Q87GC5_nD2 192.8.1 101-175 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002994295 Q87H02_nD1 2002.1.1 1-300 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994296 Q87FP8_nD1 5052.1.1 6-405 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'Proton glutamate symport protein' 'alpha complex topology' 002994297 Q87GU8_nD1 5067.1.1 11-335 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002994298 Q87Q33_nD1 2485.1.1 1-75 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002994299 Q87QP0_nD1 144.1.1 41-135 'PGBD-like' 'PGBD-like' 'PGBD-like' 'alpha arrays' 002994300 Q87QP0_nD2 235.1.1 141-328 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002994301 Q87LX1_nD3 12.6.1 736-800 'Glycoside hydrolase family 127 middle domain-related' 'Glycoside hydrolase family 127 middle domain-related' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002994302 Q87LX1_nD1 12.3.1 1-285 'supersandwich' 'supersandwich' 'Glycosyl hydrolase domain-like' 'beta sandwiches' 002994303 Q87LX1_nD2 109.2.1 286-735 'alpha/alpha toroid' 'alpha/alpha toroid' 'Repetitive alpha hairpins' 'alpha superhelices' 002994304 Q87MA3_nD1 7503.1.1 21-189 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002994305 Q87RV9_nD1 4325.1.1 6-60 'YegP-like' 'YegP-like' 'YegP-like' 'mixed a+b and a/b' 002994306 Q87RV9_nD2 807.1.1 61-95 'Allophycocyanin linker chain (domain)' 'Allophycocyanin linker chain (domain)' 'Allophycocyanin linker chain (domain)' 'a+b two layers' 002994307 Q87FT4_nD1 4019.1.1 56-170 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha-helical domain in beta-lactamase/transpeptidase-like proteins' 'alpha complex topology' 002994308 Q87FT4_nD2 223.3.1 26-55,171-275 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'a+b domain in beta-lactamase/transpeptidase-like proteins' 'Profilin-like' 'a+b three layers' 002994309 Q87FT4_nD3 51.1.1 276-380 'Penicillin-binding protein associated domain' 'Penicillin-binding protein associated domain' 'Penicillin-binding protein associated domain' 'beta sandwiches' 002994310 Q87QN8_nD1 377.1.1 31-70 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002994311 Q87NX9_nD1 3755.3.1 51-150 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002994312 Q87NX9_nD2 5086.1.1 151-244 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994313 Q87GA9_nD2 7512.1.1 156-345 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994314 Q87GA9_nD1 7512.1.1 1-155 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994315 Q87M97_nD1 1.1.9 1-198 'PUA domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994316 Q87LY1_nD1 2003.1.5 6-150 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994317 Q87LY1_nD2 2003.1.5 151-340 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994318 Q87Q01_nD1 211.1.1 6-155 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994319 Q87Q01_nD2 211.1.1 161-215 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994320 Q87Q01_nD3 211.1.1 216-350 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994321 Q87IT4_nD1 296.1.1 1-110 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'Sulfite reductase hemoprotein (SiRHP), domains 2 and 4' 'a+b three layers' 002994322 Q87MP2_nD1 2486.1.1 26-290 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002994323 Q87PB2_nD1 9.16.1 41-135 'Hypothetical protein Atu4866' 'Hypothetical protein Atu4866' 'Lipocalins/Streptavidin' 'beta barrels' 002994324 Q87PB2_nD2 9.23.1 136-230 'Hypothetical protein BT_0869' 'Hypothetical protein BT_0869' 'Lipocalins/Streptavidin' 'beta barrels' 002994325 Q56725_nD1 3236.1.1 6-380 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002994326 Q87QB1_nD1 3236.1.1 1-300 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter (CPA)' 'Cation-proton antiporter' 'alpha complex topology' 002994327 Q87LU1_nD2 628.1.1 76-255 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002994328 Q87LU1_nD1 101.1.2 1-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002994329 Q87JX1_nD1 139.1.1 11-175 'Cytochrome c3-like' 'Cytochrome c3-like' 'Multiheme cytochromes' 'few secondary structure elements' 002994330 Q87JX1_nD2 107.1.1 181-364 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002994331 Q87PJ1_nD1 629.1.1 1-190 'TorD-like (Pfam 06192)' 'TorD-like (Pfam 06192)' 'TorD-like (Pfam 06192)' 'alpha bundles' 002994332 Q87J10_nD1 604.8.1 6-100 'Smac/diablo' 'Smac/diablo' 'Spectrin repeat-like' 'alpha bundles' 002994333 Q87HV5_nD2 282.1.1 306-470 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002994334 Q87HV5_nD1 5048.1.1 6-290 'Aquaporin-like' 'Aquaporin-like' 'Aquaporin-like' 'alpha complex topology' 002994335 Q87PZ2_nD1 601.37.1 156-270 'Photosystem II lipoprotein Psb27' 'Photosystem II lipoprotein Psb27' 'Four-helical up-and-down bundle' 'alpha bundles' 002994336 Q87PZ2_nD2 3282.1.1 6-155,291-450 'LidA' 'LidA' 'LidA' 'a+b complex topology' 002994337 Q87GA1_nD2 2003.1.1 126-310 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994338 Q87GA1_nD1 236.1.1 6-125,311-344 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002994339 Q87FM7_nD1 2004.1.1 1-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994340 Q87LA3_nD1 2.1.1 6-115 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994341 Q87J58_nD1 314.1.1 6-235 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'Class II aaRS and biotin synthetases' 'a+b three layers' 002994342 Q87I47_nD1 213.1.1 6-160 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002994343 Q79YT5_nD1 601.13.1 1-125 'Flagellar export chaperone FliS' 'Flagellar export chaperone FliS' 'Four-helical up-and-down bundle' 'alpha bundles' 002994344 Q87IH7_nD1 5039.1.1 11-200 'Cytochrome c oxidase subunit III-like' 'Cytochrome c oxidase subunit III-like' 'Cytochrome c oxidase subunit III-like' 'alpha bundles' 002994345 Q87PW9_nD1 205.1.1 51-95 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002994346 Q87PW9_nD2 2002.1.1 1-50,96-290 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994347 Q87FF6_nD1 213.1.1 1-189 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002994348 Q87RN0_nD1 2002.1.1 1-280 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994349 Q87H53_nD1 2003.1.2 6-580 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994350 Q87PA8_nD2 2004.1.1 346-598 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994351 Q87PA8_nD1 1075.4.1 11-345 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994352 Q87LD6_nD1 512.1.1 6-235 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)' 'a+b two layers' 002994353 Q87LD6_nD2 3053.1.1 236-445 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'barrel domain in putative modulator of DNA gyrase, PmbA/TldD' 'beta barrels' 002994354 Q87JT8_nD1 11.1.1 26-100 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994355 Q87HC5_nD3 301.3.1 286-433 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002994356 Q87HC5_nD1 3706.1.1 51-210 'Conserved type six secretion component TssL-related' 'Conserved type six secretion component TssL-related' 'Conserved type six secretion component TssL-related' 'alpha bundles' 002994357 Q87HC5_nD2 109.4.1 236-270 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994358 Q87NZ8_nD1 10.12.1 1-125 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994359 Q87GW5_nD1 139.2.1 51-145 'Di-heme elbow motif' 'Di-heme elbow motif' 'Multiheme cytochromes' 'few secondary structure elements' 002994360 Q87KN9_nD2 5084.5.3 156-350,371-624 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002994361 Q87KN9_nD1 3070.2.1 26-155 'TonB-dependent receptor plug domain' 'TonB-dependent receptor plug domain' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002994362 Q87LJ8_nD1 2004.1.1 1-350 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994363 Q87G41_nD1 375.1.4 81-130 'Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994364 Q87G41_nD2 2484.1.1 6-80,131-485 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994365 Q87SN9_nD2 316.2.1 76-170 'Rv2827c C-terminal domain-like' 'Rv2827c C-terminal domain-like' 'Nucleotidyltransferase-like' 'a+b three layers' 002994366 Q87SN9_nD1 101.1.2 6-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002994367 Q87KC3_nD1 2485.1.1 26-200 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002994368 Q87QF4_nD1 1075.3.1 6-555 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994369 Q87SL4_nD1 7579.1.1 1-270 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994370 Q87KD2_nD3 2003.1.1 231-360 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994371 Q87KD2_nD4 4261.1.1 366-455 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002994372 Q87KD2_nD2 4261.1.1 141-225 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002994373 Q87KD2_nD1 2003.1.1 1-125 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994374 Q87HF0_nD2 325.1.7 261-330 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994375 Q87HF0_nD1 2011.1.1 6-260 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002994376 Q87QB0_nD1 131.1.1 26-305 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002994377 Q87GW3_nD1 5058.1.1 36-170 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002994378 Q87GW3_nD2 7579.1.1 171-585 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994379 Q87G85_nD1 2007.1.3 1-120 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994380 Q87G85_nD2 101.1.2 126-225 'winged' 'HTH' 'HTH' 'alpha arrays' 002994381 Q87IC4_nD3 7523.1.1 151-250 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994382 Q87IC4_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002994383 Q87IC4_nD2 7523.1.1 86-150,251-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994384 Q87JW7_nD1 2003.6.1 1-263 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002994385 Q87N44_nD1 2004.1.1 6-225 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994386 Q87J32_nD1 2004.1.1 1-255 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994387 Q87QZ3_nD2 192.8.1 106-180 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Eukaryotic DNA topoisomerase I, dispensable insert domain' 'Long alpha-hairpin' 'alpha bundles' 002994388 Q87QZ3_nD1 632.16.1 1-95 'N-terminal domain of a replication restart primosome factor PriC' 'N-terminal domain of a replication restart primosome factor PriC' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002994389 Q87R99_nD1 331.4.1 26-130 'Kinase associated domain 1, KA1' 'Kinase associated domain 1, KA1' 'TBP-like' 'a+b two layers' 002994390 Q87JK1_nD1 5084.1.1 21-185 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002994391 Q87JK1_nD2 301.3.1 201-320 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002994392 Q87LS0_nD1 3896.1.1 21-80,116-153 'Intramembrane CDP-DAG synthetase' 'Intramembrane CDP-DAG synthetase-related' 'Intramembrane CDP-DAG synthetase-related' 'alpha duplicates or obligate multimers' 002994393 Q87II4_nD1 4033.1.1 6-115 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'alpha arrays' 002994394 Q87II4_nD2 4052.1.1 116-235 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'beta complex topology' 002994395 Q87II4_nD3 633.6.1 236-384 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002994396 P22098_nD2 2002.1.1 281-480 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994397 P22098_nD1 2002.1.1 26-280 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994398 Q87G65_nD3 UNASSIGNED 241-275 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002994399 Q87G65_nD2 2006.1.6 6-45,91-308 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994400 Q87G65_nD1 109.16.1 56-90 'TROVE domain-like' 'TROVE domain-like' 'Repetitive alpha hairpins' 'alpha superhelices' 002994401 Q87FW8_nD1 4.1.1 1-70 'SH3' 'SH3' 'SH3' 'beta barrels' 002994402 Q87TM9_nD1 101.1.1 6-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994403 Q87TM9_nD2 191.1.1 71-193 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002994404 Q87HU0_nD1 10.12.1 1-279 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994405 Q87Q93_nD2 2005.1.1 46-210 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002994406 Q87Q93_nD1 7524.1.1 16-45 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002994407 Q87MZ1_nD1 11.1.1 26-140 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994408 Q87JT7_nD1 5010.1.1 11-35 'Bacterial aa3 type cytochrome c oxidase subunit IV' 'Bacterial aa3 type cytochrome c oxidase subunit IV' 'Bacterial aa3 type cytochrome c oxidase subunit IV' 'extended segments' 002994409 Q87JT7_nD2 274.1.1 56-170 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002994410 Q87MC0_nD1 101.1.1 6-63 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994411 Q87SU4_nD1 4186.1.1 1-70,91-103 'Ribosomal protein L21p' 'Ribosomal protein L21p' 'Ribosomal protein L21p' 'beta barrels' 002994412 Q87JA4_nD1 2006.1.1 1-219 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994413 Q87KN3_nD1 2003.1.5 26-280 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994414 Q87J03_nD1 5069.1.1 11-184 'Transmembrane di-heme cytochromes' 'Transmembrane heme-binding four-helical bundle' 'Transmembrane heme-binding four-helical bundle' 'alpha bundles' 002994415 Q87TL3_nD2 5084.5.1 186-350 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002994416 Q87TL3_nD1 11.1.4 36-185 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994417 Q87TL3_nD3 9.1.1 351-490 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002994418 Q87I69_nD2 2002.5.1 131-388 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002994419 Q87I69_nD1 2007.1.3 1-130 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994420 Q87NS2_nD1 102.1.2 12-280 'DNA-glycosylase' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002994421 P40607_nD1 2004.1.1 1-438 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994422 Q87MI0_nD1 2485.1.1 1-155 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002994423 Q87QU3_nD1 222.1.1 1-135 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002994424 Q87R11_nD1 2004.1.1 16-330 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994425 Q87R11_nD2 148.1.3 331-485 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994426 Q87R11_nD3 601.1.1 496-590 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994427 Q87R11_nD4 2004.1.1 486-495,596-635 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994428 Q87TG4_nD1 213.1.1 1-140 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002994429 Q87PX7_nD1 213.1.1 1-155 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002994430 Q87TQ1_nD1 319.1.1 16-135 'HSP20-like chaperones' 'HSP20-like chaperones' 'HSP20-like' 'beta sandwiches' 002994431 Q87H47_nD1 2003.1.1 1-165 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994432 Q87H47_nD2 129.1.1 166-295 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002994433 Q87HJ8_nD4 225.1.1 366-500 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994434 Q87HJ8_nD3 605.1.1 276-360 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994435 Q87HJ8_nD2 109.3.1 181-275 'Ankyrin repeat' 'Ankyrin repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994436 Q87HJ8_nD1 604.39.1 6-160 'S-component of energy-coupling factor (ECF) transporters' 'S-component of energy-coupling factor (ECF) transporters' 'Spectrin repeat-like' 'alpha bundles' 002994437 Q87MY2_nD1 304.42.1 1-159 'Molybdenum cofactor biosynthesis protein C, MoaC' 'Molybdenum cofactor biosynthesis protein C, MoaC' 'Alpha-beta plaits' 'a+b two layers' 002994438 Q87J71_nD1 2003.1.1 1-250 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994439 Q87JC8_nD1 206.1.1 6-285 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002994440 Q87FQ9_nD2 2002.1.1 6-60,161-720 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994441 Q87FQ9_nD1 11.1.1 61-160 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994442 Q87SG9_nD3 7570.1.1 336-490 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'MurD-like peptide ligases, peptide-binding domain' 'a/b three-layered sandwiches' 002994443 Q87SG9_nD1 2493.1.1 6-105 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'MurF and HprK N-domain-like' 'a/b three-layered sandwiches' 002994444 Q87SG9_nD2 2004.1.1 106-335 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994445 Q87J85_nD2 221.1.2 326-419 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002994446 Q87J85_nD1 2005.1.1 6-325 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002994447 Q87RB9_nD1 3415.1.1 1-399 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002994448 Q87QT2_nD2 2003.1.10 171-265 'PreATP-grasp domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994449 Q87QT2_nD1 206.1.3 1-170,266-388 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002994450 Q87J42_nD1 4161.1.1 6-275 'MOSC N-terminal domain-like' 'MOSC N-terminal domain-like' 'MOSC N-terminal domain-like' 'beta complex topology' 002994451 Q87J42_nD2 1.1.7 276-380 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994452 Q87J42_nD4 221.1.1 511-605 'Ubiquitin-like' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002994453 Q87J42_nD3 7514.1.1 386-510 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002994454 Q87JZ5_nD1 7529.1.1 1-170 'Macro domain-like' 'Macro domain-like' 'Macro domain-like' 'a/b three-layered sandwiches' 002994455 Q87TQ5_nD1 2004.1.1 1-359 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994456 Q87GK0_nD1 101.1.1 26-105 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994457 Q87GK0_nD2 2484.1.1 111-280 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994458 Q87LK8_nD1 7574.1.1 1-330 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002994459 Q87LK8_nD2 7574.1.1 331-525 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002994460 Q87LK8_nD3 7522.1.1 526-664 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'a/b three-layered sandwiches' 002994461 Q87LL0_nD2 298.1.1 156-325 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain' 'FwdE/GAPDH domain-like' 'a+b two layers' 002994462 Q87LL0_nD1 2003.1.1 1-155,326-340 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994463 Q87P70_nD1 2002.1.1 1-298 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994464 Q87IY0_nD2 304.48.1 186-345 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994465 Q87IY0_nD1 223.1.1 21-185 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994466 Q87PB0_nD1 505.1.1 6-125 'Repressor of bacterial conjugation FinO' 'Repressor of bacterial conjugation FinO' 'Repressor of bacterial conjugation FinO' 'alpha arrays' 002994467 Q87PB0_nD2 4.1.1 161-209 'SH3' 'SH3' 'SH3' 'beta barrels' 002994468 Q87HR5_nD2 5001.1.1 111-270 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002994469 Q87HR5_nD1 3291.1.1 6-90 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002994470 Q87HR5_nD3 633.6.1 321-349 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002994471 Q87RZ4_nD1 7577.1.1 6-340 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002994472 Q87RZ4_nD2 3016.1.1 341-440 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002994473 Q87S75_nD1 1.1.5 6-115 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994474 O87081_nD2 3019.1.1 176-275 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002994475 O87081_nD1 601.51.1 11-175,276-365 'alpha-helical domain in phase 1 flagellin' 'alpha-helical domain in phase 1 flagellin' 'Four-helical up-and-down bundle' 'alpha bundles' 002994476 Q87JQ6_nD1 7577.1.1 1-465 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002994477 Q87L96_nD2 304.8.1 306-385 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002994478 Q87L96_nD1 7531.1.1 1-305 'Carbamate kinase-like' 'Carbamate kinase-like' 'Carbamate kinase-like' 'a/b three-layered sandwiches' 002994479 Q87L96_nD3 304.8.1 386-450 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002994480 Q87TA6_nD1 2484.6.1 46-130 'Periplasmic domain of ExbD/TolR' 'Periplasmic domain of ExbD/TolR' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994481 Q87KF9_nD1 559.1.1 6-65 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'alpha duplicates or obligate multimers' 002994482 Q87KF9_nD2 559.1.1 66-90 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'H-NS histone-like proteins, N-terminal domain' 'alpha duplicates or obligate multimers' 002994483 Q87R14_nD1 7516.1.1 1-250 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002994484 Q87MQ0_nD2 6055.1.1 76-120 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002994485 Q87MQ0_nD1 5034.1.1 31-75 'Photosystem II reaction center protein K, PsbK' 'Photosystem II reaction center protein K, PsbK' 'Photosystem II reaction center protein K, PsbK' 'extended segments' 002994486 Q87RK1_nD1 325.1.6 16-169 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994487 Q87TG8_nD1 375.1.2 6-38 'Desulforedoxin' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994488 Q87KW4_nD1 2488.1.1 1-155 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002994489 Q87QX4_nD1 7579.1.1 6-125,146-265 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994490 Q87RA5_nD3 327.5.1 346-455 'a+b domain in acetyl-CoA synthetase-like proteins' 'a+b domain in acetyl-CoA synthetase-like proteins' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994491 Q87RA5_nD2 323.1.1 136-345 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002994492 Q87RA5_nD1 323.1.1 1-150 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002994493 Q87M36_nD1 3457.1.1 1-115,146-160 'GxGD membrane protease' 'GxGD membrane protease' 'GxGD membrane protease' 'alpha bundles' 002994494 Q87J41_nD1 2005.1.1 1-275 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002994495 Q87G81_nD1 2004.1.1 1-260 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994496 Q56705_nD3 3943.1.1 71-105,436-485 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'beta sandwiches' 002994497 Q56705_nD4 601.1.2 206-225,321-370,396-425 'I/LWEQ domain (Pfam 01608)' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994498 Q56705_nD2 192.7.1 271-295 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002994499 Q56705_nD5 601.52.1 371-395 'Flagellar hook-associated protein 1 helical domain' 'Flagellar hook-associated protein 1 helical domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002994500 Q56705_nD1 3019.1.1 106-205,426-435 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002994501 Q56705_nD6 601.50.1 11-70,486-665 'Flagellar cap protein FliD helical bundle domain' 'Flagellar cap protein FliD helical bundle domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002994502 Q87MV0_nD3 101.1.8 246-440 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002994503 Q87MV0_nD2 186.1.1 136-240 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002994504 Q87MV0_nD1 3826.1.1 1-85 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'Copper-sensitive operon repressor (CsoR)' 'alpha bundles' 002994505 Q87N96_nD3 304.48.1 256-415 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994506 Q87N96_nD4 2002.5.1 416-685 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002994507 Q87N96_nD1 223.1.1 11-125 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994508 Q87N96_nD2 223.1.1 126-250 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994509 Q87N96_nD5 282.1.1 686-815 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002994510 Q87LW7_nD2 7523.1.1 121-250,311-335 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994511 Q87LW7_nD1 7523.1.1 21-120,251-310 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994512 Q87HL2_nD3 207.6.1 316-485 'Serralysin-like metalloprotease-C' 'Serralysin-like metalloprotease-C' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002994513 Q87HL2_nD2 11.1.1 191-305 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994514 Q87HL2_nD1 224.1.1 6-80,106-185 'Gelsolin-like' 'Gelsolin-like' 'Gelsolin-like' 'a+b three layers' 002994515 Q87RH7_nD1 2485.1.1 1-85 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002994516 Q87NF2_nD3 4091.1.1 296-525 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'beta complex topology' 002994517 Q87NF2_nD2 144.1.1 181-295 'PGBD-like' 'PGBD-like' 'PGBD-like' 'alpha arrays' 002994518 Q87NF2_nD1 235.1.2 48-180 'Scaffolding domain of YcbB' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002994519 Q87FD6_nD1 2007.6.1 6-225 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994520 Q87FD6_nD2 103.13.1 226-295 'C-terminal lid domain of glucokinase regulatory protein' 'C-terminal lid domain of glucokinase regulatory protein' 'RuvA-C' 'alpha arrays' 002994521 Q87JP3_nD1 2003.1.1 1-235 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994522 Q87IJ4_nD3 3755.3.1 271-435 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002994523 Q87IJ4_nD2 223.1.1 141-270 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994524 Q87IJ4_nD1 223.1.1 6-135 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994525 Q87Q85_nD1 377.1.1 6-60 'LIM domain-like' 'LIM domain-like' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002994526 Q87GK7_nD1 5084.5.1 21-375 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002994527 Q87Q65_nD1 101.1.1 46-280 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994528 Q87MH9_nD1 5054.1.1 36-190 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002994529 Q87MH9_nD2 5054.1.1 196-340 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002994530 Q87QT5_nD3 4261.1.1 256-345 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002994531 Q87QT5_nD2 2003.1.1 106-255 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994532 Q87QT5_nD1 5054.1.1 6-105 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'Voltage-gated ion channels' 'alpha complex topology' 002994533 Q87QR1_nD5 3291.1.1 301-515 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002994534 Q87QR1_nD2 601.4.1 41-180 'Histidine kinase associated sensor domains' 'Histidine kinase associated sensor domains' 'Four-helical up-and-down bundle' 'alpha bundles' 002994535 Q87QR1_nD1 5043.2.1 6-40,181-210 'NarQ transmembrane domain' 'NarQ transmembrane domain' 'Sensor proteins transmembrane domains' 'extended segments' 002994536 Q87QR1_nD4 3922.1.1 271-300,516-540 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'Helical domain in structural maintenance of chromosomes protein 3' 'alpha bundles' 002994537 Q87QR1_nD3 4168.1.1 211-270 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002994538 Q87IT7_nD2 7523.1.1 91-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994539 Q87IT7_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002994540 Q87TF6_nD1 192.15.1 86-145 'Endosomal sorting complex assembly domains' 'Endosomal sorting complex assembly domains' 'Long alpha-hairpin' 'alpha bundles' 002994541 Q87IG0_nD2 7522.1.1 191-325 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'a/b three-layered sandwiches' 002994542 Q87IG0_nD1 7574.1.1 6-190 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002994543 Q87RI0_nD1 282.1.1 1-135 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002994544 Q87RQ6_nD1 7011.1.1 18-365 'RodA transmembrane domain' 'RodA transmembrane domain' 'RodA transmembrane domain' 'alpha bundles' 002994545 Q87IA7_nD2 109.4.1 156-375 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994546 Q87IA7_nD1 109.4.1 71-155 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994547 Q87PM2_nD2 1.1.7 96-203 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994548 Q87PM2_nD1 1.1.7 1-90 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994549 Q87IU5_nD5 5086.1.1 376-575 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994550 Q87IU5_nD2 3757.1.1 1-30,266-295 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002994551 Q87IU5_nD1 223.1.1 61-175 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994552 Q87IU5_nD4 3755.3.1 296-375,576-620 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002994553 Q87IU5_nD3 223.1.1 31-60,176-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994554 Q87JV2_nD1 2002.1.1 1-235 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994555 Q87JS2_nD1 101.1.1 16-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994556 Q87TM1_nD3 7523.1.1 271-490 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994557 Q87TM1_nD2 7523.1.1 21-55,181-270,491-515 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994558 Q87TM1_nD1 304.136.1 56-155 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002994559 Q87R21_nD3 1075.1.2 6-60,266-405 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994560 Q87R21_nD2 1.1.2 101-220 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994561 Q87R21_nD1 304.128.1 61-100,221-260 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002994562 Q87KK5_nD2 131.1.1 206-405 'HD-domain/PDEase-like' 'HD-domain/PDEase-like' 'PDEase-like' 'alpha complex topology' 002994563 Q87KK5_nD1 2002.5.1 1-200 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002994564 Q87PL0_nD1 3978.1.1 11-228,251-265 'Integral membrane Acyl-CoA desaturase' 'Integral membrane Acyl-CoA desaturase' 'Integral membrane Acyl-CoA desaturase' 'alpha complex topology' 002994565 Q87H50_nD3 304.48.1 456-490,546-680 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994566 Q87H50_nD2 109.4.1 416-455 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994567 Q87H50_nD1 109.4.1 6-400 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994568 Q87SL7_nD1 375.1.1 1-100 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994569 Q87SL7_nD2 4023.1.1 121-245 'N-terminal a+b domain in DNA primase core' 'N-terminal a+b domain in DNA primase core' 'N-terminal a+b domain in DNA primase core' 'a+b two layers' 002994570 Q87SL7_nD5 507.1.1 451-580 'DnaB helicase N-terminal domain-related' 'DnaB helicase N-terminal domain-related' 'DnaB helicase N-terminal domain-related' 'alpha arrays' 002994571 Q87SL7_nD3 2006.1.3 246-375 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994572 Q87SL7_nD4 4973.1.1 376-440 'helical domain in DNA primase DnaG catalytic core' 'helical domain in DNA primase DnaG catalytic core' 'helical domain in DNA primase DnaG catalytic core' 'alpha bundles' 002994573 Q87N94_nD4 4168.1.1 361-420 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002994574 Q87N94_nD3 223.1.1 41-70,226-325 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994575 Q87N94_nD1 223.1.1 71-225 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994576 Q87N94_nD6 3291.1.1 526-600 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'Charged multivesicular body protein 3 (CHMP3)-related' 'alpha bundles' 002994577 Q87N94_nD5 5086.1.1 421-525,601-690 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994578 Q87N94_nD2 192.1.1 6-40,326-360 'GreA transcript cleavage protein, N-terminal domain' 'GreA transcript cleavage protein, N-terminal domain' 'Long alpha-hairpin' 'alpha bundles' 002994579 Q87NI4_nD1 4312.1.1 6-50 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002994580 Q87MH4_nD1 633.10.1 11-130 'IVS-encoded protein-like' 'IVS-encoded protein-like' 'Bromodomain-like' 'alpha bundles' 002994581 Q87KX1_nD2 1075.5.1 246-460 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994582 Q87KX1_nD1 1075.5.1 11-245 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994583 Q87H59_nD3 4060.1.1 176-204 'NSP3 homodimer' 'NSP3 homodimer' 'NSP3 homodimer' 'a+b duplicates or obligate multimers' 002994584 Q87H59_nD2 230.5.1 56-175 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002994585 Q87H59_nD1 3529.1.1 21-55 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'Major vault protein (MVP) structural repeat domain' 'beta sandwiches' 002994586 Q87LY3_nD1 7577.1.1 6-320 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002994587 Q87LY3_nD2 3016.1.1 321-430 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002994588 Q87RY9_nD2 7523.1.1 96-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994589 Q87RY9_nD1 101.1.2 6-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002994590 Q87SK9_nD2 131.2.1 121-370,391-400 'Poly A polymerase C-terminal region-like' 'Poly A polymerase C-terminal region-like' 'PDEase-like' 'alpha complex topology' 002994591 Q87SK9_nD1 316.1.1 1-120 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002994592 Q87QF5_nD1 2004.1.1 1-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994593 Q87JG6_nD2 593.1.1 6-135,411-530 'GroEL equatorial domain-like' 'GroEL equatorial domain-like' 'GroEL equatorial domain-like' 'alpha bundles' 002994594 Q87JG6_nD1 2498.5.1 136-190,376-410 'GroEL-intermediate domain like' 'GroEL-intermediate domain like' 'Zincin-like' 'mixed a+b and a/b' 002994595 Q87JG6_nD3 2487.1.1 191-375 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002994596 Q87RH4_nD2 375.1.1 121-155 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994597 Q87RH4_nD1 2004.1.1 1-120,156-214 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994598 Q87RE8_nD2 2007.3.1 241-385 'Succinyl-CoA synthetase domains' 'Succinyl-CoA synthetase domains' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994599 Q87RE8_nD1 206.1.3 1-235 'ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002994600 Q877T5_nD1 2004.1.1 6-205 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994601 Q877T5_nD2 1.1.7 206-300 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994602 Q877T5_nD3 1.1.8 301-394 'Aminomethyltransferase beta-barrel domain' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994603 Q87T41_nD1 10.12.1 1-180 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994604 Q87JB2_nD2 300.1.1 286-505 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002994605 Q87JB2_nD1 300.1.1 36-285 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'Phospholipase D/nuclease' 'a+b three layers' 002994606 Q87J35_nD1 391.1.1 46-85 'Fibronectin type I module' 'Fibronectin type I module-like' 'Fibronectin type I module-like' 'few secondary structure elements' 002994607 Q87IP9_nD1 71.1.1 21-245 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'Lipoprotein localization factors LolAB' 'beta meanders' 002994608 Q87PY8_nD1 2496.1.1 6-95 'SpoIIaa-like' 'SpoIIaa-like' 'SpoIIaa-like' 'a/b three-layered sandwiches' 002994609 Q87PY8_nD2 5073.1.2 106-130 'Copper efflux ATPase transmembrane domain' 'Calcium ATPase transmembrane domain-related' 'Calcium ATPase transmembrane domain-related' 'alpha bundles' 002994610 Q87PY8_nD3 1075.1.1 141-350 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994611 Q87J18_nD2 77.1.1 126-284 'Outer surface protein' 'Outer surface protein' 'open-sided beta-meander' 'beta meanders' 002994612 Q87J18_nD1 378.1.1 36-110 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'His-Me finger endonucleases' 'few secondary structure elements' 002994613 Q79YW0_nD2 327.16.1 81-130 'Ring-building motif II in type III secretion system' 'Ring-building motif II in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994614 Q79YW0_nD1 6055.1.1 51-75 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'Preprotein translocase subunit YajC' 'extended segments' 002994615 Q79YW0_nD3 327.13.1 136-260 'Ring-building motif I in type III secretion system' 'Ring-building motif I in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994616 Q79YW0_nD4 327.13.1 261-320,367-450 'Ring-building motif I in type III secretion system' 'Ring-building motif I in type III secretion system' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994617 Q87HD8_nD1 1.1.5 1-159 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994618 Q87J34_nD1 3313.1.1 16-99 'Uncharacterized protein VC_A0919' 'Uncharacterized protein VC_A0919' 'Uncharacterized protein VC_A0919' 'a+b two layers' 002994619 Q87QQ2_nD1 4990.1.1 91-185 'Lipase chaperone LifO-like' 'Lipase chaperone LifO-like' 'Lipase chaperone LifO-like' 'alpha arrays' 002994620 Q87QQ2_nD2 4990.1.1 166-335 'Lipase chaperone LifO-like' 'Lipase chaperone LifO-like' 'Lipase chaperone LifO-like' 'alpha arrays' 002994621 Q87PF5_nD2 605.1.1 201-280 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994622 Q87PF5_nD1 223.1.1 1-200 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994623 Q87PF5_nD4 2007.1.3 446-575 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994624 Q87PF5_nD3 225.1.1 281-440 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994625 Q87PR1_nD2 706.1.1 141-185 'Head domain of nucleotide exchange factor GrpE' 'Head domain of nucleotide exchange factor GrpE' 'Head domain of nucleotide exchange factor GrpE' 'beta complex topology' 002994626 Q87PR1_nD1 3456.1.1 86-140 'NADH-quinone oxidoreductase subunit A' 'NADH-quinone oxidoreductase subunit A' 'NADH-quinone oxidoreductase subunit A' 'extended segments' 002994627 Q87FF5_nD1 5051.1.1 1-490 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002994628 Q87RY7_nD2 192.29.1 61-220 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'bMERB domain (bivalent Mical/EHBP Rab binding)' 'Long alpha-hairpin' 'alpha bundles' 002994629 Q87RY7_nD1 3569.1.1 26-60 'Epidermal growth factor receptor transmembrane-juxtamembrane segment' 'Epidermal growth factor receptor transmembrane-juxtamembrane segment' 'Epidermal growth factor receptor transmembrane-juxtamembrane segment-like' 'extended segments' 002994630 Q87QN0_nD1 243.1.1 1-135 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002994631 Q87RS7_nD1 109.4.1 31-480 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994632 Q87RS7_nD2 304.48.1 496-755 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994633 Q87QQ8_nD4 1.1.7 36-50,301-375 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994634 Q87QQ8_nD3 1.1.7 51-60,211-300 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994635 Q87QQ8_nD1 325.1.7 61-100,171-210 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994636 Q87QQ8_nD2 5086.1.1 101-170 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002994637 Q87RW7_nD1 274.1.1 6-110 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002994638 Q87RW7_nD2 207.10.1 116-163,202-420 'Arctic yeast antifreeze protein' 'Arctic yeast antifreeze protein' 'Single-stranded right-handed beta-helix' 'beta duplicates or obligate multimers' 002994639 Q87JL8_nD1 311.1.1 1-145 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002994640 Q87J68_nD1 2002.1.1 6-374 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994641 Q87PI9_nD4 1.1.2 786-950 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994642 Q87PI9_nD3 2003.2.1 116-190,386-775 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002994643 Q87PI9_nD1 1001.1.1 61-115 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'Formate dehydrogenase/DMSO reductase, domain 1' 'a+b two layers' 002994644 Q87PI9_nD2 2003.2.1 191-385 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Formate dehydrogenase/DMSO reductase, domains 2 and 3' 'Rossmann-like' 'a/b three-layered sandwiches' 002994645 Q87IB7_nD3 109.4.1 371-555 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994646 Q87IB7_nD1 109.4.1 1-40,66-90,291-310 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994647 Q87IB7_nD2 2006.1.6 96-285 'vWA-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994648 Q87HP0_nD1 4152.2.1 21-93 'Uncharacterized protein CV_2116' 'Uncharacterized protein CV_2116' 'Shew3726-like' 'a+b two layers' 002994649 Q87J79_nD2 7507.1.1 236-354 'Glutaminase/Asparaginase C-terminal domain' 'Glutaminase/Asparaginase C-terminal domain' 'Glutaminase/Asparaginase C-terminal domain' 'a/b three-layered sandwiches' 002994650 Q87J79_nD1 7546.1.1 26-235 'Glutaminase/Asparaginase N-terminal domain' 'Glutaminase/Asparaginase N-terminal domain' 'Glutaminase/Asparaginase N-terminal domain' 'a/b three-layered sandwiches' 002994651 Q87RY3_nD1 252.2.1 21-85 'GCC-box binding domain-like' 'GCC-box binding domain-like' 'DNA-binding domain' 'a+b two layers' 002994652 Q87RY3_nD2 603.2.1 101-250 'STAT' 'STAT' 'STAT-like' 'alpha bundles' 002994653 Q87RY3_nD4 101.1.8 391-595 'DNA breaking-rejoining enzymes' 'HTH' 'HTH' 'alpha arrays' 002994654 Q87RY3_nD3 186.1.1 256-390 'lambda integrase-N' 'lambda integrase-N' 'lambda integrase-N-like' 'alpha arrays' 002994655 Q87L20_nD2 3016.1.1 326-403 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002994656 Q87L20_nD1 7577.1.1 1-325 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002994657 Q87QH1_nD4 5067.1.1 16-55,346-525 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002994658 Q87QH1_nD3 304.28.1 151-195,286-345 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994659 Q87QH1_nD1 304.28.1 56-150 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994660 Q87QH1_nD7 304.28.1 676-720,811-875 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994661 Q87QH1_nD8 5067.1.1 526-565,876-1030 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002994662 Q87QH1_nD5 304.28.1 566-675 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994663 Q87QH1_nD2 304.28.2 196-225,246-280 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994664 Q87QH1_nD6 304.28.2 721-810 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994665 Q79YT6_nD2 7523.1.1 151-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994666 Q79YT6_nD1 7523.1.1 41-150,266-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994667 Q87KW7_nD1 2007.1.3 1-115 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994668 Q87KW7_nD2 101.1.2 116-229 'winged' 'HTH' 'HTH' 'alpha arrays' 002994669 Q87TK3_nD1 2011.2.1 16-285 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002994670 Q87G84_nD1 601.1.1 11-115 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994671 Q87G84_nD2 605.1.1 121-190 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994672 Q87G84_nD3 225.1.1 191-348 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994673 P0A2W2_nD1 132.1.1 6-75 'Acyl-carrier protein (ACP)' 'Acyl-carrier protein (ACP)' 'ACP-like' 'alpha bundles' 002994674 Q87KV1_nD5 225.1.1 856-1005 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994675 Q87KV1_nD2 108.1.1 531-605 'EF-hand' 'EF-hand-related' 'EF-hand' 'alpha arrays' 002994676 Q87KV1_nD6 2007.1.3 1011-1143 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994677 Q87KV1_nD1 5051.1.1 1-525 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002994678 Q87KV1_nD4 4168.1.1 766-855 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002994679 Q87KV1_nD3 223.1.1 621-765 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994680 Q87JE4_nD2 2002.4.1 146-410 'Nicotinate/Quinolinate PRTase C-terminal domain-like' 'Nicotinate/Quinolinate PRTase C-terminal domain-like' 'TIM beta/alpha-barrel' 'a/b barrels' 002994681 Q87JE4_nD1 325.1.4 6-145 'Nicotinate/Quinolinate PRTase N-terminal domain-like' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994682 Q87KS0_nD1 375.1.1 36-75 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002994683 Q87RA6_nD1 222.1.1 6-120 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase' 'Thioesterase/thiol ester dehydrase-isomerase-like' 'a+b two layers' 002994684 Q87JA6_nD2 7579.1.1 201-460 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994685 Q87JA6_nD1 4312.1.1 107-190 'RelE-like' 'RelE-like' 'RelE-like' 'a+b two layers' 002994686 Q87JP7_nD1 2002.1.1 36-194 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994687 Q87RZ2_nD1 3355.1.1 36-465 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002994688 Q87KJ0_nD4 2484.1.1 531-700 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994689 Q87KJ0_nD3 3203.1.1 416-530 'Putative oxidoreductase' 'Putative oxidoreductase' 'Putative oxidoreductase' 'a+b two layers' 002994690 Q87KJ0_nD5 214.1.1 731-830 'SH2' 'SH2' 'SH2' 'a+b two layers' 002994691 Q87KJ0_nD2 601.7.1 236-405 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002994692 Q87KJ0_nD1 316.1.1 6-65,91-235 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002994693 Q87GI5_nD1 148.1.1 6-60,103-135 'Histone' 'Histone-related' 'Histone-like' 'alpha arrays' 002994694 Q87PX3_nD3 2002.5.1 346-595 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002994695 Q87PX3_nD1 223.1.1 31-175 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994696 Q87PX3_nD2 304.48.1 176-345 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002994697 Q87KC5_nD4 205.1.1 261-340 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002994698 Q87KC5_nD3 129.1.1 106-130,341-375 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002994699 Q87KC5_nD1 633.23.1 81-105 'Claudin' 'Claudin' 'Bromodomain-like' 'alpha bundles' 002994700 Q87KC5_nD5 11.1.1 376-485 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994701 Q87KC5_nD2 5061.1.1 51-90,131-250 'Preprotein translocase SecY subunit' 'Preprotein translocase SecY subunit' 'Preprotein translocase SecY subunit' 'alpha complex topology' 002994702 Q87SA2_nD1 7014.1.1 6-263 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain' 'alpha bundles' 002994703 Q87LU4_nD1 4126.1.1 1-220 'beta-carbonic anhydrase' 'beta-carbonic anhydrase' 'beta-carbonic anhydrase-like' 'a/b three-layered sandwiches' 002994704 Q87MX9_nD1 7513.1.1 6-295 'CofD-like' 'CofD-like' 'CofD-like' 'a/b three-layered sandwiches' 002994705 Q87QB7_nD1 2485.1.1 1-85 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002994706 Q87P53_nD1 241.1.1 1-123 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002994707 Q87R67_nD1 2486.1.1 11-290 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002994708 Q87MF0_nD1 7512.1.1 6-170 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994709 Q87MF0_nD2 7512.1.1 171-375 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994710 Q87SW0_nD2 7587.1.1 201-335 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'Rossmann-like domain in carbohydrate phosphatases' 'a/b three-layered sandwiches' 002994711 Q87SW0_nD1 4018.1.1 1-200 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b domain in carbohydrate phosphatases' 'a+b two layers' 002994712 Q87G19_nD1 3355.1.1 1-563 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002994713 Q87RB5_nD1 2003.1.1 1-240 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994714 Q87GY1_nD2 5050.1.1 206-390 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994715 Q87GY1_nD1 5050.1.1 1-195 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994716 Q87LG6_nD2 2005.1.1 6-195,361-435,471-605 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002994717 Q87LG6_nD5 3008.1.1 791-880 'A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'a+b three layers' 002994718 Q87LG6_nD6 192.7.1 886-950 'tRNA-binding arm' 'tRNA-binding arm' 'Long alpha-hairpin' 'alpha bundles' 002994719 Q87LG6_nD1 1.1.1 196-360 'acid protease' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994720 Q87LG6_nD3 2005.1.1 436-470 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002994721 Q87LG6_nD4 140.1.1 606-790 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases' 'alpha bundles' 002994722 Q87MJ9_nD2 5073.1.1 231-285 'Calcium ATPase transmembrane domain M' 'Calcium ATPase transmembrane domain-related' 'Calcium ATPase transmembrane domain-related' 'alpha bundles' 002994723 Q87MJ9_nD1 1180.1.1 86-230 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'alpha bundles' 002994724 Q87IM9_nD1 305.2.1 16-110 'Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)' 'Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)' 'DCoH-like' 'a+b two layers' 002994725 Q79YY9_nD2 11.1.1 111-195 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994726 Q79YY9_nD1 192.18.1 66-95 'MxiH-like' 'MxiH-like' 'Long alpha-hairpin' 'alpha bundles' 002994727 Q79YY9_nD3 4.1.1 96-110,196-235 'SH3' 'SH3' 'SH3' 'beta barrels' 002994728 Q87LT6_nD4 5060.2.1 246-380 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002994729 Q87LT6_nD3 4177.1.1 176-225,381-405 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'BAR/IMD domain-like' 'alpha duplicates or obligate multimers' 002994730 Q87LT6_nD2 5060.2.1 61-175 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'Toxin coregulated pilus biosynthesis protein E cytoplasmic domain' 'V-type ATP synthase subunit C' 'alpha bundles' 002994731 Q87LT6_nD1 3115.1.1 6-60 'RplX-like' 'RplX-like' 'GP2-like' 'a+b two layers' 002994732 Q87LA6_nD1 310.3.1 6-210 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002994733 Q87RK8_nD1 603.5.1 1-120 'FlgN-like' 'FlgN-like' 'STAT-like' 'alpha bundles' 002994734 Q87TH6_nD1 5059.1.1 1-290 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002994735 Q87SR7_nD1 101.1.2 6-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002994736 Q87SR7_nD2 628.1.1 76-220 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002994737 Q87K92_nD2 7580.1.1 166-365 'RibA-like' 'RibA-like' 'RibA-like' 'a/b three-layered sandwiches' 002994738 Q87K92_nD1 4308.1.1 16-165 'YbiA-like' 'YbiA-like' 'YbiA-like' 'a+b complex topology' 002994739 Q87J97_nD1 5051.1.1 41-535 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002994740 Q87KG6_nD1 210.1.6 41-585 'Gamma-glutamyltranspeptidase-like' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002994741 Q87LT4_nD1 2004.1.1 1-200 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994742 Q87TI0_nD1 4121.1.1 26-65 'CorA soluble domain-like' 'CorA soluble domain-like' 'CorA soluble domain-like' 'a+b three layers' 002994743 Q87TI0_nD2 3835.1.1 66-155 'Type I hyperactive antifreeze protein' 'Type I hyperactive antifreeze protein' 'Type I hyperactive antifreeze protein' 'alpha bundles' 002994744 Q87PW2_nD2 11.1.4 146-245,391-405,471-480 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994745 Q87PW2_nD5 11.1.4 491-580 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994746 Q87PW2_nD1 130.1.1 11-110 'LEM/SAP HeH motif' 'LEM/SAP HeH motif' 'LEM/SAP HeH motif-like' 'alpha arrays' 002994747 Q87PW2_nD3 11.1.4 301-375 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994748 Q87PW2_nD4 11.1.4 246-290,406-455,481-490 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994749 Q87T73_nD1 2003.1.1 11-390 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994750 Q87K45_nD1 101.1.1 6-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994751 Q87K45_nD2 191.1.1 76-195 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'Tetracyclin repressor-like, C-terminal domain' 'alpha bundles' 002994752 Q87FP7_nD1 274.1.1 11-164 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002994753 Q87J02_nD1 136.1.1 16-430 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'alpha complex topology' 002994754 Q87J02_nD2 136.1.1 436-720 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'Heme-dependent peroxidases' 'alpha complex topology' 002994755 Q87RJ7_nD2 2003.4.1 151-320 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002994756 Q87RJ7_nD1 2003.4.1 6-150 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002994757 Q87I08_nD2 220.1.1 6-25,81-160 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002994758 Q87I08_nD1 605.1.1 31-80 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994759 Q87K44_nD1 7579.1.1 11-285 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'alpha/beta-Hydrolases' 'a/b three-layered sandwiches' 002994760 Q87KF1_nD1 2003.6.1 1-205 'Ribokinase-like' 'Ribokinase-like' 'Rossmann-like' 'a/b three-layered sandwiches' 002994761 Q87KF1_nD2 2002.1.1 221-440 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994762 Q87GV4_nD2 243.3.1 136-223 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002994763 Q87GV4_nD1 4.1.1 61-135 'SH3' 'SH3' 'SH3' 'beta barrels' 002994764 Q87HE4_nD1 243.3.1 46-125 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002994765 Q87LT8_nD1 274.1.1 36-139 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002994766 Q87JV3_nD1 4091.1.1 26-165 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'beta complex topology' 002994767 Q87S03_nD1 2006.1.1 26-325 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994768 Q87QY6_nD1 2.1.1 6-75 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994769 Q87S21_nD1 2011.1.1 6-100 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002994770 Q87S21_nD2 2011.1.1 101-430 'Zn-dependent exopeptidases' 'Zn-dependent exopeptidases' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002994771 P22099_nD1 880.1.1 26-535 'ADC synthase' 'ADC synthase' 'ADC synthase' 'a+b duplicates or obligate multimers' 002994772 Q87J62_nD2 211.1.1 66-135 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994773 Q87J62_nD1 211.1.1 1-65 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002994774 Q87KU9_nD3 316.1.1 281-465 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002994775 Q87KU9_nD4 601.7.1 471-605 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002994776 Q87KU9_nD1 10.12.1 6-130 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994777 Q87KU9_nD2 282.1.1 131-280 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002994778 Q87HF3_nD1 107.1.1 46-125 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002994779 Q87TN3_nD1 1008.1.1 1-75 'BRCC36 C-terminal helical domain' 'BRCC36 C-terminal helical domain' 'BRCC36 C-terminal helical domain' 'alpha bundles' 002994780 Q87FX2_nD1 101.1.2 1-95 'winged' 'HTH' 'HTH' 'alpha arrays' 002994781 Q87M71_nD2 2003.1.7 66-255 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994782 Q87M71_nD1 101.1.2 6-60 'winged' 'HTH' 'HTH' 'alpha arrays' 002994783 Q87TC3_nD1 376.1.1 16-55 'RING/U-box' 'RING/U-box-like' 'RING/U-box-like' 'few secondary structure elements' 002994784 Q87TC3_nD2 7573.1.1 56-240 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002994785 Q87QX6_nD2 208.1.1 291-405 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002994786 Q87QX6_nD1 7516.1.1 1-290 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002994787 Q87MA1_nD1 5050.1.1 11-230 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994788 Q87MA1_nD2 5050.1.1 236-450 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994789 Q87S82_nD1 1134.1.1 21-100 'Eukaryotic C-Ala helical domain' 'C-terminal helical domain of alanine-tRNA ligase' 'C-terminal helical domain of alanine-tRNA ligase' 'alpha bundles' 002994790 Q87KG0_nD1 633.10.1 26-145 'IVS-encoded protein-like' 'IVS-encoded protein-like' 'Bromodomain-like' 'alpha bundles' 002994791 P0A481_nD1 143.2.1 6-115 'Ribosomal protein L20' 'Ribosomal protein L20' 'PABP domain-like' 'alpha arrays' 002994792 Q87H21_nD1 107.1.1 31-145 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002994793 Q87H21_nD2 107.1.1 151-220 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002994794 Q87SM0_nD1 206.1.1 6-470 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002994795 Q87RZ1_nD1 1075.1.2 6-170 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994796 Q87FZ4_nD1 601.2.1 26-129 'Cytochromes' 'Cytochromes' 'Four-helical up-and-down bundle' 'alpha bundles' 002994797 Q87K25_nD3 7523.1.1 161-260 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994798 Q87K25_nD1 101.1.2 1-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002994799 Q87K25_nD2 7523.1.1 91-160,261-289 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994800 Q87L12_nD1 2006.1.1 1-228 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994801 Q87SZ0_nD2 305.1.1 6-50,181-245 'RBP11-like subunits of RNA polymerase' 'RBP11-like subunits of RNA polymerase' 'DCoH-like' 'a+b two layers' 002994802 Q87SZ0_nD1 240.2.1 51-180 'Insert subdomain of RNA polymerase alpha subunit' 'Insert subdomain of RNA polymerase alpha subunit' 'Ribosomal protein TL5/L25 C-terminal domain-like' 'a+b complex topology' 002994803 Q87SZ0_nD3 102.1.1 251-315 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002994804 Q87SR4_nD2 2003.1.7 76-253 'NagB/RpiA/CoA transferase-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994805 Q87SR4_nD1 101.1.2 6-70 'winged' 'HTH' 'HTH' 'alpha arrays' 002994806 Q87SI9_nD1 5046.1.1 31-80 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002994807 Q87GK9_nD1 5065.1.1 6-265 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002994808 Q87S92_nD1 1075.5.1 1-235 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994809 Q87S92_nD2 1075.5.1 256-520 'Multidrug and toxic compound extrusion (MATE) transporter' 'Multidrug and toxic compound extrusion (MATE) transporter' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994810 Q87H88_nD4 2.1.1 236-315 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994811 Q87H88_nD3 2.1.1 171-230 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994812 Q87H88_nD1 2.1.1 36-105 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994813 Q87H88_nD5 2.1.1 316-395 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994814 Q87H88_nD2 2.1.1 106-170 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994815 Q87KY9_nD2 5104.1.1 201-318 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'C-terminal domain in DHH phosphoesterases' 'a+b three layers' 002994816 Q87KY9_nD1 2006.1.2 1-200 'DHH phosphoesterases' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994817 Q87GC8_nD1 304.139.2 1-345 'CRISPR-associated protein Cas7f/Csy3' 'Cas7-related' 'Alpha-beta plaits' 'a+b two layers' 002994818 Q79YW9_nD1 5073.1.1 6-260 'Calcium ATPase transmembrane domain M' 'Calcium ATPase transmembrane domain-related' 'Calcium ATPase transmembrane domain-related' 'alpha bundles' 002994819 Q87FR5_nD1 3415.1.1 11-45,81-225 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002994820 Q87FW9_nD1 220.1.1 26-143 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002994821 Q87NJ7_nD1 7110.1.1 136-265 'Helical insertion of YcjX stress protein' 'Helical insertion of YcjX stress protein' 'Helical insertion of YcjX stress protein' 'alpha arrays' 002994822 Q87NJ7_nD2 2004.1.1 6-135,266-458 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994823 Q87FU0_nD1 130.2.1 1-70 'PF09905 (DUF2132)' 'PF09905 (DUF2132)' 'LEM/SAP HeH motif-like' 'alpha arrays' 002994824 Q87TL4_nD2 101.1.1 111-190 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994825 Q87TL4_nD1 142.1.1 6-110 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002994826 Q87HD5_nD3 1.16.1 86-135,306-315,426-470 'Baseplate wedge protein gp6 domain I' 'Baseplate wedge protein gp6 domain I' 'cradle loop barrel' 'beta barrels' 002994827 Q87HD5_nD4 4081.1.1 316-425 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'beta sandwiches' 002994828 Q87HD5_nD2 4081.1.1 136-305 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'Baculovirus p35 protein-related' 'beta sandwiches' 002994829 Q87HD5_nD5 327.7.1 486-605 'Cation efflux protein cytoplasmic domain-like' 'Cation efflux protein cytoplasmic domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994830 Q87HD5_nD1 6027.1.1 6-65 'Host-nuclease inhibitor protein Gam' 'Host-nuclease inhibitor protein Gam' 'Host-nuclease inhibitor protein Gam' 'alpha arrays' 002994831 Q87IB2_nD1 2.1.1 21-110 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994832 Q87PV5_nD1 109.4.1 16-250 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994833 Q87T32_nD2 2004.1.1 211-400 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994834 Q87T32_nD1 247.1.1 1-210,401-449 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'Metallo-hydrolase/oxidoreductase' 'a+b four layers' 002994835 Q87IG1_nD1 325.1.7 6-80 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994836 Q87IG1_nD2 147.1.1 132-165 'Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex' 'Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex' 'Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex' 'alpha arrays' 002994837 Q87IG1_nD3 323.1.1 166-385 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'CoA-dependent acyltransferases' 'a+b complex topology' 002994838 Q87L00_nD1 2.1.1 31-105 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994839 Q87L00_nD2 2004.1.1 106-345 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994840 Q87SF4_nD1 2487.1.1 6-150 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002994841 Q87SF4_nD2 2007.1.1 156-379 'Class I glutamine amidotransferase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994842 Q87KU8_nD1 2484.1.1 1-205 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994843 Q87MX3_nD3 205.1.1 96-165 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002994844 Q87MX3_nD1 205.1.1 1-25 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002994845 Q87MX3_nD2 3858.1.1 36-90 'Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit' 'Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit' 'Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit' 'few secondary structure elements' 002994846 Q87KF6_nD3 283.1.1 301-595 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002994847 Q87KF6_nD1 2484.3.1 6-150 'Creatinase/prolidase N-terminal domain' 'Creatinase/prolidase N-terminal domain' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994848 Q87KF6_nD2 2484.3.1 156-300 'Creatinase/prolidase N-terminal domain' 'Creatinase/prolidase N-terminal domain' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994849 Q87RS2_nD1 1075.3.1 16-225 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994850 Q87IH8_nD1 5038.1.1 1-660 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'Cytochrome c oxidase subunit I-like' 'alpha superhelices' 002994851 Q87Q49_nD2 4.1.1 216-350 'SH3' 'SH3' 'SH3' 'beta barrels' 002994852 Q87Q49_nD1 2484.1.1 6-215,351-470 'Ribonuclease H-like' 'Ribonuclease H-like' 'Ribonuclease H-like' 'mixed a+b and a/b' 002994853 Q87FJ8_nD1 324.1.1 1-140 'OsmC-like' 'OsmC-like' 'OsmC-like' 'a+b two layers' 002994854 Q87FI2_nD3 101.1.1 226-270 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994855 Q87FI2_nD2 101.1.1 171-225 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002994856 Q87FI2_nD1 10.12.1 16-170 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994857 Q87QT7_nD1 109.4.1 46-110,131-245 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994858 Q87IK4_nD1 101.1.2 6-90 'winged' 'HTH' 'HTH' 'alpha arrays' 002994859 Q87IK4_nD2 7523.1.1 91-320 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994860 Q87T15_nD1 4987.1.1 6-70 'Ribosomal protein L31p' 'Ribosomal protein L31p' 'Ribosomal protein L31p' 'few secondary structure elements' 002994861 Q87G83_nD2 2004.1.1 341-608 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994862 Q87G83_nD1 1075.4.1 1-340 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994863 Q87Q72_nD1 11.1.1 1-140 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994864 Q87Q72_nD2 241.15.1 141-245 'FP (Fbxo7/PI31) dimerization domain' 'FP (Fbxo7/PI31) dimerization domain' 'Type III secretory system chaperone-like' 'a+b two layers' 002994865 Q87QQ7_nD2 304.28.2 181-215,236-275 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994866 Q87QQ7_nD5 304.28.1 566-670 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994867 Q87QQ7_nD8 5067.1.1 511-560,866-1030 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002994868 Q87QQ7_nD6 304.28.2 721-810 'Multidrug efflux transporter AcrB TolC docking domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994869 Q87QQ7_nD7 304.28.1 671-720,811-865 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994870 Q87QQ7_nD1 304.28.1 41-130 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994871 Q87QQ7_nD3 304.28.1 131-180,276-330 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002994872 Q87QQ7_nD4 5067.1.1 1-35,331-505 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002994873 Q87TL2_nD3 164.1.1 391-425 'Chorismate mutase II' 'Chorismate mutase II' 'Chorismate mutase II' 'alpha bundles' 002994874 Q87TL2_nD2 206.1.1 56-320 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002994875 Q87TL2_nD1 206.1.1 6-45 'Protein kinase' 'Protein kinase/SAICAR synthase/ATP-grasp' 'Protein kinase/SAICAR synthase/ATP-grasp' 'a+b complex topology' 002994876 Q87R23_nD4 2004.1.1 476-990 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994877 Q87R23_nD3 2004.1.1 356-470 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994878 Q87R23_nD5 4354.1.1 991-1150 'TRCF domain' 'TRCF domain' 'TRCF domain' 'a+b two layers' 002994879 Q87R23_nD2 2004.1.1 1-130,216-355 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994880 Q87R23_nD1 506.2.1 131-215 'UvrB interaction domain' 'UvrB interaction domain' 'Colicin E3 ribonuclease domain-like' 'beta meanders' 002994881 Q87Q38_nD1 2004.1.1 1-250 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994882 Q87IT6_nD2 5050.1.1 196-390 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994883 Q87IT6_nD1 5050.1.1 6-195 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994884 Q87FM6_nD1 5065.1.1 6-320 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'Type II ABC importer transmembrane domain fold' 'alpha bundles' 002994885 Q87PF6_nD2 1.1.7 196-300 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002994886 Q87PF6_nD1 301.2.1 1-195,301-393 'PurM N-terminal domain-like' 'PurM N-terminal domain-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002994887 Q87IA6_nD3 109.4.1 196-325 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002994888 Q87IA6_nD4 2008.1.1 326-535 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002994889 Q87IA6_nD2 130.1.1 96-140 'LEM/SAP HeH motif' 'LEM/SAP HeH motif' 'LEM/SAP HeH motif-like' 'alpha arrays' 002994890 Q87IA6_nD1 101.1.2 6-95,141-195 'winged' 'HTH' 'HTH' 'alpha arrays' 002994891 Q87LE1_nD1 330.2.1 1-90 'Ribosome binding protein Y (YfiA homologue)' 'Ribosome binding protein Y (YfiA homologue)' 'dsRBD-like' 'a+b two layers' 002994892 Q87QE6_nD1 9.1.1 31-145 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002994893 Q87GN1_nD1 150.1.1 1-140 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002994894 Q87GP2_nD1 11.1.1 1-98 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994895 Q87FG4_nD1 1075.4.1 1-340 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994896 Q87FG4_nD2 2004.1.1 346-615 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994897 Q87JQ3_nD1 3415.1.1 1-400 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'Concentrative nucleoside transporter' 'alpha complex topology' 002994898 Q87R40_nD1 282.1.1 1-135 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002994899 Q87L48_nD1 2007.1.6 6-170 'Aminoacid dehydrogenase-like, N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994900 Q87L48_nD2 2003.1.1 171-425 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994901 Q87MJ2_nD1 174.1.1 6-150 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'Tetraspanin transmembrane domain' 'few secondary structure elements' 002994902 Q87JN3_nD1 304.4.1 1-100 'Dimeric alpha+beta barrel' 'Dimeric alpha+beta barrel' 'Alpha-beta plaits' 'a+b two layers' 002994903 Q87NY7_nD1 150.1.2 1-220 'Heme oxygenase/Ribonucleotide reductase' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002994904 Q87T62_nD2 7512.1.1 166-350 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994905 Q87T62_nD1 7512.1.1 1-165,351-368 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994906 Q87NU3_nD1 2003.1.3 11-400 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994907 Q87T40_nD1 7512.1.1 1-195,391-405 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994908 Q87T40_nD2 7512.1.1 196-390 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002994909 Q87KZ9_nD1 UNASSIGNED 16-44 UNASSIGNED UNASSIGNED UNASSIGNED UNASSIGNED 002994910 Q87KZ9_nD2 325.1.6 81-285 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002994911 Q87T37_nD1 2006.1.1 1-220 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002994912 Q87QV5_nD1 2003.1.5 1-323 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994913 Q87KA0_nD1 2004.1.1 1-255 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994914 Q87KK4_nD1 5050.1.1 6-205 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002994915 Q87G17_nD2 10.12.1 86-110 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994916 Q87G17_nD1 101.1.4 6-85 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002994917 Q87MB3_nD1 3099.1.1 6-75 'Uncharacterized protein CV0237' 'Uncharacterized protein CV0237' 'Uncharacterized protein CV0237' 'alpha arrays' 002994918 Q87T56_nD1 2003.1.1 1-313 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994919 Q87T31_nD1 2002.1.1 1-255 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994920 Q87Q22_nD2 628.1.1 76-215 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'Fatty acid responsive transcription factor FadR, C-terminal domain' 'alpha bundles' 002994921 Q87Q22_nD1 101.1.2 1-75 'winged' 'HTH' 'HTH' 'alpha arrays' 002994922 Q87RV3_nD1 7573.1.1 6-150 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002994923 Q87N27_nD1 2004.1.1 6-170 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994924 Q87N27_nD2 148.1.3 171-205 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994925 Q87N27_nD3 138.1.1 206-320 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'DNA polymerase III clamp loader subunits, C-terminal domain' 'alpha arrays' 002994926 Q87KR1_nD1 7569.1.1 1-190 'Uracil-DNA glycosylase-like' 'Uracil-DNA glycosylase-like' 'Uracil-DNA glycosylase-like' 'a/b three-layered sandwiches' 002994927 Q87PQ8_nD1 4198.1.1 41-164 'TerB-like' 'TerB-like' 'TerB-like' 'alpha arrays' 002994928 Q87NJ2_nD4 2007.1.3 436-565 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994929 Q87NJ2_nD3 225.1.1 271-425 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994930 Q87NJ2_nD2 605.1.1 216-270 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994931 Q87NJ2_nD1 223.1.1 11-195 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994932 Q87GE3_nD4 5084.5.1 171-180,216-230,256-270,336-380,526-575,621-655,681-815 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002994933 Q87GE3_nD3 192.5.1 381-525 'HR1 repeat' 'HR1 repeat' 'Long alpha-hairpin' 'alpha bundles' 002994934 Q87GE3_nD1 601.1.1 61-170,276-335 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994935 Q87GE3_nD5 601.1.1 821-845 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994936 Q87GE3_nD2 5084.1.1 181-255,656-680 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002994937 Q87TD2_nD1 274.1.1 1-109 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002994938 Q87JM9_nD1 10.1.2 26-140 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002994939 Q87HY7_nD1 1075.3.1 56-300 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994940 Q87RN8_nD2 7573.1.1 151-305 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002994941 Q87RN8_nD1 7573.1.1 6-150 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002994942 Q87IP1_nD1 5.1.3 31-373 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002994943 Q87G86_nD1 2003.1.1 1-130 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994944 Q87G86_nD2 4261.1.1 136-215 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002994945 Q87RM3_nD1 11.1.5 26-190 'Common fold of diphtheria toxin/transcription factors/cytochrome f' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994946 Q87RM3_nD2 2498.2.1 196-330 'beta-N-acetylhexosaminidase-like domain' 'beta-N-acetylhexosaminidase-like domain' 'Zincin-like' 'mixed a+b and a/b' 002994947 Q87RM3_nD4 11.1.1 821-883 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994948 Q87RM3_nD3 2002.1.1 331-840 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994949 Q87IQ6_nD1 601.1.1 1-70,96-165 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002994950 Q87IQ6_nD2 4198.1.1 71-95 'TerB-like' 'TerB-like' 'TerB-like' 'alpha arrays' 002994951 Q87TD6_nD2 2004.1.1 81-500 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994952 Q87TD6_nD1 327.8.1 11-75 'GSPII protein E N-terminal domain-like' 'GSPII protein E N-terminal domain-like' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002994953 Q87GD7_nD1 7575.1.1 51-290 'Caspase-like' 'Caspase-like' 'Caspase-like' 'a/b three-layered sandwiches' 002994954 Q87GH5_nD1 3754.1.1 6-44 'Bacterial cell wall synthesis membrane enzyme MraY-related' 'Bacterial cell wall synthesis membrane enzyme MraY-related' 'Bacterial cell wall synthesis membrane enzyme MraY-related' 'alpha bundles' 002994955 Q87GH5_nD2 3877.1.1 56-225 'Membrane protein insertase YidC' 'Membrane protein insertase YidC-related' 'Membrane protein insertase YidC-related' 'alpha bundles' 002994956 Q87SD7_nD3 223.1.1 131-270 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994957 Q87SD7_nD7 601.3.1 651-783 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002994958 Q87SD7_nD4 605.1.1 286-340 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002994959 Q87SD7_nD6 2007.1.3 516-645 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994960 Q87SD7_nD1 5058.1.1 6-95 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002994961 Q87SD7_nD2 148.1.3 96-130 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002994962 Q87SD7_nD5 225.1.1 341-510 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002994963 Q87TK5_nD1 3355.1.1 11-455 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'dicarboxylate/sodium symporter' 'alpha complex topology' 002994964 Q87NK2_nD1 3425.1.1 31-155 'YycH N-terminal domain' 'YycH N-terminal domain' 'Two-component system yycF/yycG regulatory protein yycH-like' 'a+b three layers' 002994965 Q87IQ7_nD1 2485.1.1 11-119 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002994966 Q87NI7_nD3 223.1.1 151-165,326-345 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994967 Q87NI7_nD4 2002.5.1 126-145,346-570 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002994968 Q87NI7_nD1 101.1.2 1-115 'winged' 'HTH' 'HTH' 'alpha arrays' 002994969 Q87NI7_nD2 223.1.1 166-325 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002994970 Q87MA9_nD1 3921.1.1 11-205 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'Na(+)-translocating NADH-quinone reductase subunit D' 'alpha complex topology' 002994971 Q87QA1_nD2 2004.1.1 321-570 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994972 Q87QA1_nD1 1075.4.1 1-320 'Type I ABC exporter transmembrane domain fold' 'Type I ABC exporter transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002994973 Q87MA0_nD1 10.12.1 1-210 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002994974 Q87JR8_nD1 2002.1.1 1-305,326-460 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002994975 Q87PG2_nD2 11.1.1 56-155 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994976 Q87PG2_nD1 7002.1.1 6-35 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'TM trimerization region of envelope glycoprotein B' 'alpha duplicates or obligate multimers' 002994977 Q87NE6_nD1 165.1.1 1-58 'SinR repressor dimerisation domain-like' 'SinR repressor dimerisation domain-like' 'Dimerisation interlock' 'alpha duplicates or obligate multimers' 002994978 Q87RB8_nD2 2003.1.1 121-280 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994979 Q87RB8_nD1 2007.1.6 6-120 'Aminoacid dehydrogenase-like, N-terminal domain' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002994980 Q87ME9_nD1 208.1.1 6-260 'Trimeric LpxA-like enzymes' 'Trimeric LpxA-like enzymes' 'Single-stranded left-handed beta-helix' 'beta duplicates or obligate multimers' 002994981 Q87L60_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002994982 Q87L60_nD2 7523.1.1 81-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002994983 Q87I56_nD1 5059.1.1 6-295 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002994984 Q87GX3_nD1 2492.1.1 1-154 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'Cytidine deaminase-like' 'a+b three layers' 002994985 Q87PH2_nD1 5076.2.1 16-240 'Putative sulfate permease CysZ' 'Putative sulfate permease CysZ' 'Mitochondrial ADP/ATP carrier-like' 'alpha complex topology' 002994986 Q87KB8_nD1 304.8.1 1-90 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002994987 Q87JT5_nD1 2004.1.1 1-244 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002994988 Q87HH0_nD2 601.33.1 171-310 'CHAD domain' 'CHAD domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002994989 Q87HH0_nD1 601.33.1 11-170 'CHAD domain' 'CHAD domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002994990 Q87T04_nD1 2.1.1 6-80 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002994991 Q87M58_nD1 2003.1.1 1-335 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002994992 Q87KP4_nD1 213.1.1 6-145 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002994993 Q87PT6_nD4 5000.4.1 306-390,441-460 'delta-Endotoxin (insectocide), N-terminal domain' 'delta-Endotoxin (insectocide), N-terminal domain' 'Toxins' membrane translocation domains' 'alpha arrays' 002994994 Q87PT6_nD3 4156.1.1 236-295,391-440 'Sec63 N-terminal subdomain-like' 'Sec63 N-terminal subdomain-like' 'Sec63 N-terminal subdomain-like' 'alpha arrays' 002994995 Q87PT6_nD1 3174.3.1 26-150 'PAAR-repeat protein' 'PAAR-repeat protein' 'Ribosomal protein L14-like' 'beta barrels' 002994996 Q87PT6_nD5 601.19.1 526-690 'Apolipoprotein' 'Apolipoprotein' 'Four-helical up-and-down bundle' 'alpha bundles' 002994997 Q87PT6_nD2 11.1.4 161-225,471-485 'Prealbumin-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002994998 Q87IQ5_nD1 2008.1.1 6-180 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002994999 Q87HR6_nD1 101.1.4 1-55 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002995000 Q87HR6_nD2 295.1.1 56-100 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain' 'ssDNA-binding transcriptional regulator domain-like' 'a+b two layers' 002995001 Q87HK9_nD1 5085.1.1 21-70,91-435 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002995002 Q87QS6_nD1 101.1.4 6-70 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002995003 Q87IK7_nD3 7523.1.1 171-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995004 Q87IK7_nD2 7523.1.1 106-170,271-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995005 Q87IK7_nD1 101.1.2 16-105 'winged' 'HTH' 'HTH' 'alpha arrays' 002995006 Q87JJ6_nD2 5050.1.1 226-485 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002995007 Q87JJ6_nD1 5050.1.1 1-225 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'Major facilitator superfamily (MFS) general substrate transporter' 'alpha complex topology' 002995008 Q87HS8_nD5 304.48.1 481-650 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002995009 Q87HS8_nD2 4168.1.1 176-235 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002995010 Q87HS8_nD1 223.1.1 6-175 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995011 Q87HS8_nD4 223.1.1 356-480 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995012 Q87HS8_nD3 223.1.1 236-355 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995013 Q87GA4_nD1 5064.1.1 6-133 'Photosystem I reaction center subunit XI, PsaL' 'Photosystem I reaction center subunit XI, PsaL' 'Photosystem I reaction center subunit XI, PsaL' 'alpha bundles' 002995014 Q87GP4_nD1 2485.1.1 16-199 'Thioredoxin-like' 'Thioredoxin-like' 'Thioredoxin-like' 'a+b three layers' 002995015 Q87GF7_nD1 532.2.1 46-130 'Type III secretion system domains' 'Type III secretion system domains' 'Type III secretion system domain-like' 'alpha arrays' 002995016 Q87G77_nD1 301.3.1 46-175 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002995017 Q87G77_nD2 301.3.1 26-45,181-295 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002995018 Q87KH0_nD4 102.1.1 536-605 'SAM domain-like' 'SAM/DNA-glycosylase' 'HhH/H2TH' 'alpha arrays' 002995019 Q87KH0_nD3 101.1.2 411-515 'winged' 'HTH' 'HTH' 'alpha arrays' 002995020 Q87KH0_nD2 2004.1.1 211-410 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995021 Q87KH0_nD1 2004.1.1 6-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995022 P40605_nD4 5094.1.1 306-330 'OmpH-like' 'OmpH-like' 'OmpH-like' 'a+b duplicates or obligate multimers' 002995023 P40605_nD3 3297.1.1 271-305 'Helical hairpin in Ndc80' 'Helical hairpin in Ndc80' 'Helical hairpin in Ndc80' 'extended segments' 002995024 P40605_nD2 3462.1.1 246-270 'V-type proton ATPase subunit G' 'V-type proton ATPase subunit G' 'V-type proton ATPase subunit G' 'extended segments' 002995025 P40605_nD1 230.5.1 91-245 'Band 7/SPFH domain' 'Band 7/SPFH domain' 'T-fold' 'a+b two layers' 002995026 Q87FP3_nD2 7577.1.1 116-425 'PLP-dependent transferases' 'PLP-dependent transferases' 'PLP-dependent transferases' 'a/b three-layered sandwiches' 002995027 Q87FP3_nD1 2007.1.3 1-115 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995028 Q87FP3_nD3 3016.1.1 426-575 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002995029 Q87FP3_nD4 275.1.1 576-725 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase' 'a+b two layers' 002995030 Q87IA1_nD2 633.5.1 31-165 'LemA-like' 'LemA-like' 'Bromodomain-like' 'alpha bundles' 002995031 Q87IA1_nD1 5046.1.1 1-30,166-180 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'F-type ATP synthase subunit b' 'extended segments' 002995032 Q87GF3_nD1 279.1.1 56-85 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'a+b complex topology' 002995033 Q87NW9_nD1 101.1.3 36-90 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002995034 Q87ST8_nD1 246.2.1 1-265 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002995035 Q87LG0_nD1 232.1.1 1-405 'Pentein' 'Pentein' 'Pentein' 'a+b duplicates or obligate multimers' 002995036 Q87NJ3_nD1 880.1.1 6-454 'ADC synthase' 'ADC synthase' 'ADC synthase' 'a+b duplicates or obligate multimers' 002995037 Q87RT9_nD1 141.1.1 1-294 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002995038 Q87IL3_nD1 101.1.2 11-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002995039 Q87IL3_nD2 223.1.1 1-10,81-244 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995040 Q87QX2_nD1 5001.1.1 31-220 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'Family A G protein-coupled receptor-like' 'alpha bundles' 002995041 Q87QS3_nD1 101.1.2 26-120 'winged' 'HTH' 'HTH' 'alpha arrays' 002995042 Q87G31_nD2 205.1.1 51-60,126-215 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002995043 Q87G31_nD1 205.1.1 61-125 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002995044 Q87LL6_nD3 7523.1.1 166-265 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995045 Q87LL6_nD1 101.1.2 6-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002995046 Q87LL6_nD2 7523.1.1 91-165,266-298 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995047 Q87L35_nD1 210.1.4 6-313 '(Glycosyl)asparaginase' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002995048 Q87MX8_nD1 601.3.1 6-110 'Histidine-containing phosphotransfer domain, HPT domain' 'Histidine-containing phosphotransfer domain, HPT domain' 'Four-helical up-and-down bundle' 'alpha bundles' 002995049 Q87JB0_nD3 1.1.7 56-65,216-305 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995050 Q87JB0_nD4 1.1.7 41-55,306-375 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995051 Q87JB0_nD1 325.1.7 66-105,181-215 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002995052 Q87JB0_nD2 5086.1.1 106-180 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'helical hairpin of HlyD-like secretion proteins' 'alpha bundles' 002995053 Q87MN8_nD3 6096.1.1 286-375 'Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB' 'Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB' 'Dimerization domain of erythronate-4-phosphate dehydrogenase PdxB' 'a+b two layers' 002995054 Q87MN8_nD2 2003.1.1 91-265 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995055 Q87MN8_nD1 2003.1.11 1-90,266-285 'Formate/glycerate dehydrogenase catalytic domain-like' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995056 Q87TQ7_nD4 101.1.6 376-468 'TrpR' 'HTH' 'HTH' 'alpha arrays' 002995057 Q87TQ7_nD3 148.1.3 301-370 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002995058 Q87TQ7_nD1 327.10.1 6-80 'Ribosome-binding factor A (RbfA)-related' 'Ribosome-binding factor A (RbfA)-related' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002995059 Q87TQ7_nD2 2004.1.1 121-300 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995060 Q87I51_nD1 243.3.1 31-125 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002995061 Q87I51_nD2 243.3.1 126-205 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002995062 Q87I51_nD5 11.1.1 636-700 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995063 Q87I51_nD3 2498.1.1 211-505 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002995064 Q87I51_nD4 10.1.2 521-625 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002995065 Q87JG7_nD1 236.1.2 1-95 'GroES' 'GroES-related' 'GroES-like' 'beta barrels' 002995066 Q87MM3_nD4 129.1.1 611-703 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002995067 Q87MM3_nD3 129.1.1 491-605 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002995068 Q87MM3_nD2 2003.1.1 301-490 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995069 Q87MM3_nD1 2486.1.1 1-300 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002995070 Q9LB13_nD2 3755.1.1 56-190 'Putative type III secretion protein YscO-related' 'Putative type III secretion protein YscO-related' 'YscO-like' 'alpha bundles' 002995071 Q9LB13_nD1 243.1.1 1-30 'NTF2-like' 'NTF2-like' 'Cystatin-like' 'a+b two layers' 002995072 Q79YY3_nD1 1.1.5 1-165 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995073 Q87K06_nD3 64.3.1 351-390 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002995074 Q87K06_nD2 3019.1.1 236-340 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'gp11/flagellar cap protein FliD insertion domain' 'beta sandwiches' 002995075 Q87K06_nD1 11.1.1 26-225 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995076 Q87I99_nD2 4207.1.2 306-370 'MED7 hinge region' 'Mediator hinge subcomplex-like' 'Mediator hinge subcomplex-like' 'alpha duplicates or obligate multimers' 002995077 Q87I99_nD1 3978.1.1 6-305 'Integral membrane Acyl-CoA desaturase' 'Integral membrane Acyl-CoA desaturase' 'Integral membrane Acyl-CoA desaturase' 'alpha complex topology' 002995078 Q87QM7_nD1 9.1.1 11-53,77-150,176-220 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002995079 Q87HE1_nD1 7581.1.1 6-150 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002995080 Q87HE1_nD2 7581.1.1 151-275 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002995081 Q87MF4_nD3 865.1.1 321-435 'PheT/TilS domain' 'PheT/TilS domain' 'PheT/TilS domain' 'beta complex topology' 002995082 Q87MF4_nD2 3018.1.1 231-320 'MesJ substrate recognition domain-like' 'MesJ substrate recognition domain-like' 'MesJ substrate recognition domain-like' 'a+b two layers' 002995083 Q87MF4_nD1 2005.1.1 1-230 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002995084 Q87JD6_nD3 7523.1.1 111-160,281-355,546-575 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995085 Q87JD6_nD4 7523.1.1 356-545 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995086 Q87JD6_nD2 304.136.1 161-280 'Oligo-peptide binding protein (OPPA) insertion domain' 'Oligo-peptide binding protein (OPPA) insertion domain' 'Alpha-beta plaits' 'a+b two layers' 002995087 Q87JD6_nD1 101.1.2 1-130 'winged' 'HTH' 'HTH' 'alpha arrays' 002995088 Q87G52_nD2 2498.1.1 101-485 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002995089 Q87G52_nD1 243.3.1 21-100 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002995090 Q87G52_nD4 10.1.2 586-720 'Galactose-binding domain-like' 'Concanavalin A-like' 'jelly-roll' 'beta sandwiches' 002995091 Q87G52_nD3 11.1.1 486-585 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995092 Q87IW9_nD1 243.3.1 11-120 'Cystatin/monellin' 'Cystatin/monellin' 'Cystatin-like' 'a+b two layers' 002995093 Q87H61_nD4 223.1.1 321-465 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995094 Q87H61_nD3 4168.1.1 296-320 'HAMP domain' 'HAMP domain' 'HAMP domain' 'alpha duplicates or obligate multimers' 002995095 Q87H61_nD5 304.48.1 466-645 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Adenylyl and guanylyl cyclase catalytic domain-like' 'Alpha-beta plaits' 'a+b two layers' 002995096 Q87H61_nD2 3757.1.1 16-40,266-295 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'AF1503 pre-HAMP domain' 'extended segments' 002995097 Q87H61_nD1 223.1.1 41-265 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995098 Q87H61_nD6 2002.5.1 646-900 'EAL domain' 'EAL domain' 'TIM beta/alpha-barrel' 'a/b barrels' 002995099 Q87S79_nD1 2002.1.1 1-325 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995100 Q87K52_nD1 2484.2.1 1-70 'Methylated DNA-protein cysteine methyltransferase domain' 'Methylated DNA-protein cysteine methyltransferase domain' 'Ribonuclease H-like' 'mixed a+b and a/b' 002995101 Q87K52_nD2 101.1.7 71-155 'Methylated DNA-protein cysteine methyltransferase-C' 'HTH' 'HTH' 'alpha arrays' 002995102 Q87LB6_nD1 274.1.1 41-160 'Pili subunits' 'Pili subunits' 'Pili subunits' 'a+b two layers' 002995103 Q87L47_nD1 150.1.1 6-158 'Ferritin' 'Ferritin/Heme oxygenase' 'Ferritin/Heme oxygenase/4-helical cytokines' 'alpha bundles' 002995104 Q87R48_nD1 11.1.1 36-144 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995105 Q87J83_nD1 3863.1.1 71-255 'Virulence associated protein B (Vapb)' 'Virulence associated protein B (Vapb)' 'Virulence associated protein B (Vapb)' 'beta barrels' 002995106 Q87MQ3_nD1 245.2.1 11-95 'YbaB' 'YbaB' 'Ribonuclease PH domain 2-like' 'a+b two layers' 002995107 Q87TA8_nD1 109.4.1 1-245 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002995108 Q87TA8_nD2 109.4.1 246-400 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002995109 Q87S67_nD2 7523.1.1 131-240 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995110 Q87S67_nD1 7523.1.1 36-130,241-280 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995111 Q87S67_nD3 235.1.1 286-465 'Lysozyme-like' 'Lysozyme-like' 'Lysozyme-like' 'a+b complex topology' 002995112 Q87L95_nD5 258.1.1 906-1225 'Methionine synthase activation domain-like' 'Methionine synthase activation domain-like' 'Methionine synthase activation domain-like' 'a+b complex topology' 002995113 Q87L95_nD2 2002.1.1 341-640 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995114 Q87L95_nD1 2002.1.1 6-335 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995115 Q87L95_nD4 2007.1.3 746-905 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995116 Q87L95_nD3 4995.1.1 646-740 'Methionine synthase domain-like' 'Methionine synthase domain-like' 'Methionine synthase domain-like' 'alpha arrays' 002995117 Q87P17_nD1 241.1.1 1-140 'Type III secretory system chaperone' 'Type III secretory system chaperone' 'Type III secretory system chaperone-like' 'a+b two layers' 002995118 Q87SP0_nD1 246.2.1 1-70,96-263 'Metallo-dependent phosphatases' 'Metallo-dependent phosphatases' 'Carbon-nitrogen hydrolase-like' 'a+b four layers' 002995119 Q87LE4_nD1 3523.1.1 26-160 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'beta meanders' 002995120 Q87MH0_nD2 304.111.1 171-345 'PurM C-terminal domain-like' 'PurM C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002995121 Q87MH0_nD1 301.2.1 6-170 'PurM N-terminal domain-like' 'PurM N-terminal domain-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002995122 Q87M07_nD1 109.4.1 21-300 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002995123 Q87PN8_nD1 7512.1.1 1-190 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002995124 Q87PN8_nD2 7512.1.1 191-370 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002995125 Q87H57_nD1 304.103.1 21-244 'FMN-dependent nitroreductase-like' 'FMN-dependent nitroreductase-like' 'Alpha-beta plaits' 'a+b two layers' 002995126 Q87RS6_nD1 230.1.1 21-140 'Tetrahydrobiopterin biosynthesis enzymes-like' 'Tetrahydrobiopterin biosynthesis enzymes-like' 'T-fold' 'a+b two layers' 002995127 Q87RS6_nD2 230.1.1 141-280 'Tetrahydrobiopterin biosynthesis enzymes-like' 'Tetrahydrobiopterin biosynthesis enzymes-like' 'T-fold' 'a+b two layers' 002995128 Q87SQ2_nD3 311.1.1 506-645 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'Phoshotransferase/anion transport protein' 'a+b three layers' 002995129 Q87SQ2_nD1 3227.1.1 1-345 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'phosphorylation-coupled saccharide transporter ChbC' 'alpha complex topology' 002995130 Q87SQ2_nD2 2007.2.2 381-495 'Phosphotyrosine protein phosphatases I-like' 'Flavoproteins/Phosphotyrosine protein phosphatases-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995131 Q87L23_nD1 211.1.1 1-135 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002995132 Q87L23_nD2 211.1.1 136-260 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002995133 Q87JW4_nD1 1075.3.1 26-265 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002995134 Q87JP8_nD3 223.1.1 386-495 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995135 Q87JP8_nD2 2498.1.1 131-385 'Metalloproteases ("zincins") catalytic domain' 'Metalloproteases ("zincins") catalytic domain' 'Zincin-like' 'mixed a+b and a/b' 002995136 Q87JP8_nD1 101.1.4 11-80,106-130 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002995137 Q87SC8_nD1 2003.4.1 6-215 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002995138 Q87SC8_nD2 2003.4.1 216-390 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Tryptophan synthase beta subunit-like PLP-dependent enzymes' 'Rossmann-like' 'a/b three-layered sandwiches' 002995139 Q87RL1_nD3 1.1.7 291-375 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995140 Q87RL1_nD1 872.9.1 21-120 'Flagella basal-body protein flgT N-terminal domain' 'Flagella basal-body protein flgT N-terminal domain' 'Dodecin subunit-like' 'a+b two layers' 002995141 Q87RL1_nD2 7503.1.1 121-290 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'TolB, N-terminal domain' 'a/b three-layered sandwiches' 002995142 Q87SG4_nD2 7512.1.1 161-350 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002995143 Q87SG4_nD1 7512.1.1 1-160 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'UDP-Glycosyltransferase/glycogen phosphorylase' 'a/b three-layered sandwiches' 002995144 Q87NE1_nD1 205.1.1 41-220 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002995145 Q87TR3_nD1 3074.1.1 6-44 '50S ribosomal protein L34' '50S ribosomal protein L34' '50S ribosomal protein L34' 'extended segments' 002995146 Q87P06_nD1 223.1.1 6-200 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995147 Q87P06_nD2 223.1.1 206-315 'sensor domains' 'sensor domains' 'Profilin-like' 'a+b three layers' 002995148 Q87P06_nD3 225.1.1 321-365 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002995149 Q87P06_nD4 225.1.1 366-535 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002995150 Q87N15_nD1 221.1.2 6-80 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002995151 Q87N15_nD2 304.102.1 81-310 'Pseudouridine synthase' 'Pseudouridine synthase' 'Alpha-beta plaits' 'a+b two layers' 002995152 Q87FU3_nD1 4085.1.1 6-145 'RbcX-like' 'RbcX-like' 'RbcX-like' 'alpha arrays' 002995153 Q87KG2_nD1 2002.1.1 1-288 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995154 Q87IY3_nD1 5084.3.1 31-265 'Autotransporter' 'Autotransporter' 'Outer membrane meander beta-barrels' 'beta barrels' 002995155 Q87QK5_nD1 239.2.1 6-120 'HisI-like' 'HisI-like' 'Ribosomal protein L25-like' 'beta barrels' 002995156 Q87QK5_nD2 159.1.2 121-210 'MazG-related' 'all-alpha NTP pyrophosphatases' 'all-alpha NTP pyrophosphatases' 'alpha bundles' 002995157 Q87LW5_nD1 304.5.1 1-110 'GlnB-like' 'GlnB-like' 'Alpha-beta plaits' 'a+b two layers' 002995158 Q87H36_nD1 2002.1.1 1-305 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995159 Q87PL5_nD1 221.4.1 6-135 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002995160 Q87FX8_nD1 1180.1.1 51-195 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'Flagellar biosynthetic protein FliP periplasmic domain' 'alpha bundles' 002995161 Q87FX8_nD2 6026.1.1 196-245 'cwf21 domain' 'cwf21 domain' 'cwf21 domain' 'alpha duplicates or obligate multimers' 002995162 Q87R93_nD1 2003.1.1 6-140 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995163 Q87R93_nD2 4261.1.1 141-220 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'TrkA C-terminal domain-like' 'a+b two layers' 002995164 Q87PP4_nD1 2004.1.1 1-129 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995165 Q99289_nD2 2007.5.1 136-418 'SGNH hydrolase' 'SGNH hydrolase' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995166 Q99289_nD1 7092.1.1 31-135 'N-terminal domain of vibrio phospholipase' 'N-terminal domain of vibrio phospholipase' 'N-terminal domain of vibrio phospholipase' 'a+b two layers' 002995167 Q87LY8_nD1 2005.1.1 6-325 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002995168 Q87LY8_nD2 221.1.2 326-395 'Alpha-L RNA-binding motif' 'Ubiquitin-related' 'beta-Grasp' 'a+b two layers' 002995169 Q87TB4_nD1 3226.1.1 21-450 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002995170 Q87SS2_nD2 7523.1.1 106-185,286-315 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995171 Q87SS2_nD1 101.1.2 21-100 'winged' 'HTH' 'HTH' 'alpha arrays' 002995172 Q87SS2_nD3 7523.1.1 186-285 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995173 Q87LY7_nD3 325.1.6 266-425 'Duplicated hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002995174 Q87LY7_nD2 3953.1.1 161-260 'Csd3 N-terminal domain' 'Csd3 N-terminal domain' 'Csd3 N-terminal domain' 'a+b two layers' 002995175 Q87LY7_nD1 101.15.1 71-160 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002995176 Q87PE9_nD1 6159.1.1 11-45 'Nup54 C-terminal interacting domain' 'Nup54 C-terminal interacting domain' 'Nup54 C-terminal interacting domain' 'extended segments' 002995177 Q87RC4_nD1 2004.1.1 1-265 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995178 Q87Q67_nD1 872.3.1 1-105 'YbjQ-like' 'YbjQ-like' 'Dodecin subunit-like' 'a+b two layers' 002995179 Q87JV1_nD1 2003.1.1 1-140 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995180 Q87JV1_nD2 279.1.1 141-315 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'LDH C-terminal domain-like' 'a+b complex topology' 002995181 Q87IS9_nD1 5084.5.1 6-349 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002995182 Q87FS4_nD4 3755.3.1 271-395 'CT398 helical hairpin' 'CT398 helical hairpin' 'YscO-like' 'alpha bundles' 002995183 Q87FS4_nD3 3470.1.1 21-50,421-450 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'Glycophorin-A transmembrane domain' 'extended segments' 002995184 Q87FS4_nD5 2004.1.1 451-719 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995185 Q87FS4_nD2 304.58.1 51-110,206-265,406-420 'FepE-like' 'FepE-like' 'Alpha-beta plaits' 'a+b two layers' 002995186 Q87FS4_nD1 3943.1.1 111-205 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'Flagellar hook-associated protein 1 beta-sandwich domains' 'beta sandwiches' 002995187 Q87Q97_nD1 3016.1.1 6-405 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'C-terminal domain in some PLP-dependent transferases' 'a+b two layers' 002995188 Q87TN8_nD2 304.24.1 136-205 'EF-G C-terminal domain-like' 'EF-G C-terminal domain-like' 'Alpha-beta plaits' 'a+b two layers' 002995189 Q87TN8_nD1 212.1.1 6-135 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002995190 Q87K09_nD2 7514.1.1 121-250 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'Ferredoxin reductase-like, C-terminal NADP-linked domain' 'a/b three-layered sandwiches' 002995191 Q87K09_nD1 1.1.7 6-120 'Alanine racemase-C' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995192 Q87T47_nD1 7516.1.1 1-285 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' 002995193 Q87LS2_nD1 321.1.1 1-515 'Glutamine synthetase/guanido kinase' 'Glutamine synthetase/guanido kinase' 'Glutamine synthetase-like' 'a+b two layers' 002995194 Q87J46_nD1 2002.1.1 6-340 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995195 Q87S09_nD3 325.1.7 406-443 'Single hybrid motif' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'alpha/beta-Hammerhead/Barrel-sandwich hybrid' 'a+b complex topology' 002995196 Q87S09_nD2 2007.1.12 131-390 'Type II 3-dehydroquinate dehydratase' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995197 Q87S09_nD1 2.1.1 6-105 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002995198 Q87PM6_nD2 301.3.1 141-270 'OmpA-like' 'OmpA-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002995199 Q87PM6_nD1 632.11.1 61-135 'AF1782-like' 'AF1782-like' 'immunoglobulin/albumin-binding domain-like' 'alpha bundles' 002995200 Q87SJ3_nD1 225.1.1 6-215 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002995201 Q87SJ3_nD2 212.1.1 216-390 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002995202 Q87SJ3_nD3 2006.1.3 396-605 'Toprim domain' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002995203 P59410_nD2 2003.1.1 151-310 'NAD(P)-binding Rossmann-fold domains' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995204 P59410_nD1 236.1.1 1-150,311-343 'Alcohol dehydrogenase-like, N-terminal domain' 'GroES-related' 'GroES-like' 'beta barrels' 002995205 Q87JK4_nD1 2003.1.3 1-465 'Nucleotide-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995206 Q87M65_nD2 2007.1.2 61-160,291-320 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995207 Q87M65_nD1 101.1.4 1-60 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002995208 Q87M65_nD3 2007.1.2 161-290,321-330 'Periplasmic binding protein-like I' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995209 Q87R22_nD1 1.1.5 6-180 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995210 Q87NB4_nD1 2002.1.1 1-285 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995211 Q87S34_nD3 304.28.1 131-145,216-280,431-445 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002995212 Q87S34_nD4 1.1.5 281-430 'FMN-binding split barrel' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995213 Q87S34_nD1 304.28.1 31-115 'Multidrug efflux transporter AcrB pore domain' 'Ferredoxin domains in multidrug efflux transporter' 'Alpha-beta plaits' 'a+b two layers' 002995214 Q87S34_nD2 310.3.1 146-215 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002995215 Q87S34_nD5 5067.1.1 1-30,116-130,446-615 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'Multidrug efflux transporter AcrB transmembrane domain' 'alpha bundles' 002995216 Q87P25_nD1 109.4.1 6-115 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002995217 Q877K3_nD1 220.1.1 1-80 'PH domain-like' 'PH domain-like' 'PH domain-like' 'beta barrels' 002995218 Q87JX6_nD1 213.1.1 1-170 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002995219 Q87SU8_nD1 101.1.2 6-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002995220 Q87SU8_nD2 306.2.1 81-155 'C-terminal domain of arginine repressor' 'arginine repressor C terminal domain-related' 'Glucose permease domain IIB-like' 'a+b two layers' 002995221 Q87J63_nD1 2004.1.1 6-210 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995222 Q87J63_nD2 2004.1.1 211-405 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995223 Q87MG6_nD5 633.6.1 101-115,551-715 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002995224 Q87MG6_nD2 4033.1.1 116-230 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'Acyl-CoA dehydrogenase N-terminal domain-like' 'alpha arrays' 002995225 Q87MG6_nD6 3151.1.1 716-795 'SPP1 phage GP23.1' 'SPP1 phage GP23.1' 'SPP1 phage GP23.1' 'alpha arrays' 002995226 Q87MG6_nD1 109.4.1 1-85 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002995227 Q87MG6_nD4 633.6.1 86-95,366-550,796-805 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Acyl-CoA dehydrogenase C-terminal domain-like' 'Bromodomain-like' 'alpha bundles' 002995228 Q87MG6_nD3 4052.1.1 231-365 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'Acyl-CoA dehydrogenase middle domain-like' 'beta complex topology' 002995229 Q87LN3_nD2 101.1.1 106-190 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002995230 Q87LN3_nD1 142.1.1 6-100 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain of RNA polymerase sigma factors' 'Sigma2 domain-like' 'alpha complex topology' 002995231 Q87QG5_nD1 5051.1.1 6-475 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002995232 Q87SG7_nD1 3754.1.1 11-360 'Bacterial cell wall synthesis membrane enzyme MraY-related' 'Bacterial cell wall synthesis membrane enzyme MraY-related' 'Bacterial cell wall synthesis membrane enzyme MraY-related' 'alpha bundles' 002995233 Q87PX9_nD1 7525.1.1 1-195 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'Phosphoglycerate mutase-like' 'a/b three-layered sandwiches' 002995234 Q87PZ5_nD1 1075.1.1 131-295,366-410 'ABCG5/ABCG8 transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002995235 Q87QY2_nD1 213.1.1 6-230 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002995236 Q87RX9_nD1 809.1.1 21-110 'beta-lactamase-inhibitor protein, BLIP' 'beta-lactamase-inhibitor protein, BLIP' 'BLIP-like' 'a+b two layers' 002995237 Q87KR4_nD2 282.1.1 161-325 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002995238 Q87KR4_nD1 1075.1.2 1-145 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002995239 Q87KL1_nD1 3542.1.1 6-335 'Presenilin family intramembrane aspartate proteases' 'Presenilin family intramembrane aspartate proteases' 'Presenilin family intramembrane aspartate proteases' 'alpha arrays' 002995240 Q87J12_nD2 2002.1.1 86-375 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995241 Q87J12_nD1 2487.1.1 16-85 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domain' 'The "swivelling" beta/beta/alpha domains' 'a/b three-layered sandwiches' 002995242 Q87HD9_nD2 3070.1.1 111-195 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins' 'N0 domain in phage tail proteins and secretins-like' 'a+b complex topology' 002995243 Q87HD9_nD5 2.7.1 371-610 'Tail-associated lysozyme gp5-N' 'Tail-associated lysozyme gp5-N' 'OB-fold' 'beta barrels' 002995244 Q87HD9_nD1 1.1.13 6-110 'Phage tail proteins' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995245 Q87HD9_nD3 3071.1.1 226-290 'C-terminal insertion domain in phage tail proteins' 'C-terminal insertion domain in phage tail proteins' 'C-terminal insertion domain in phage tail proteins' 'a+b complex topology' 002995246 Q87HD9_nD4 1.1.13 196-225,291-365 'Phage tail proteins' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995247 Q87HF5_nD1 221.4.1 1-189 'Nudix' 'Nudix' 'beta-Grasp' 'a+b two layers' 002995248 Q87FV2_nD1 5059.1.1 1-285 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'Drug/Metabolite transporter' 'alpha bundles' 002995249 Q87GF5_nD1 1014.1.1 51-85 'AopB' 'AopB' 'AopB' 'alpha arrays' 002995250 Q87GF5_nD2 5006.1.1 91-120 'Mitochondrial cytochrome c oxidase subunit VIIa' 'Mitochondrial cytochrome c oxidase subunit VIIa' 'Mitochondrial cytochrome c oxidase subunit VIIa' 'extended segments' 002995251 Q87GF5_nD3 3065.1.1 136-175,201-230 'Fatty acid- and retinoid-binding proteins' 'Fatty acid- and retinoid-binding proteins' 'Fatty acid- and retinoid-binding proteins' 'alpha bundles' 002995252 Q87MR8_nD1 304.110.1 26-50 'Acylphosphatase-like' 'Acylphosphatase-like' 'Alpha-beta plaits' 'a+b two layers' 002995253 Q87PP6_nD1 5084.1.1 21-170 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002995254 Q87TJ5_nD2 239.1.1 131-165 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'Ribosomal protein L25-like' 'beta barrels' 002995255 Q87TJ5_nD1 386.1.1 12-50 'beta-beta-alpha zinc fingers' 'beta-beta-alpha zinc fingers' 'beta-beta-alpha zinc fingers' 'few secondary structure elements' 002995256 P66478_nD1 101.1.1 11-70 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002995257 Q87K31_nD1 5.1.3 31-134 '6-bladed' 'beta-propeller' 'beta-propeller-like' 'beta duplicates or obligate multimers' 002995258 Q87H06_nD1 2002.1.1 6-270,291-348 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995259 Q87J19_nD1 7565.1.1 1-290 'Resolvase-like' 'Resolvase-like' 'Resolvase-like' 'a/b three-layered sandwiches' 002995260 Q87J19_nD2 375.1.9 301-525 'Zinc-nucleated domain of serine integrase' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002995261 Q87NC9_nD1 304.8.1 1-75 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002995262 Q87NC9_nD2 304.8.1 76-170 'ACT-like' 'ACT-like' 'Alpha-beta plaits' 'a+b two layers' 002995263 Q87TF7_nD1 375.1.1 16-50 'Rubredoxin-related' 'Rubredoxin-related' 'Rubredoxin-like' 'few secondary structure elements' 002995264 Q87TF7_nD2 2003.1.5 51-224 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995265 Q87SC9_nD2 304.1.1 176-310 'GHMP Kinase, C-terminal domain' 'GHMP Kinase, C-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002995266 Q87SC9_nD1 212.1.1 1-175 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002995267 Q87L63_nD1 310.3.1 11-50,71-180 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'General secretion pathway protein M (EpsM) periplasmic domain-related' 'RRF/tRNA synthetase additional domain-like' 'a+b two layers' 002995268 Q87FF4_nD1 7524.1.1 6-230 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002995269 Q87TF3_nD1 2002.1.1 1-330 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995270 Q87HD4_nD1 283.2.1 6-150 'gpW/gp25-like' 'gpW/gp25-like' 'Creatinase/aminopeptidase-like' 'a+b duplicates or obligate multimers' 002995271 Q87PQ1_nD1 629.1.1 6-195 'TorD-like (Pfam 06192)' 'TorD-like (Pfam 06192)' 'TorD-like (Pfam 06192)' 'alpha bundles' 002995272 P40611_nD1 101.1.2 11-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002995273 P40611_nD5 2.1.1 651-765 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002995274 P40611_nD2 2.1.1 86-155 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002995275 P40611_nD4 2.9.1 231-650 'RNB domain-like' 'RNB domain-like' 'OB-fold' 'beta barrels' 002995276 P40611_nD3 2.1.1 156-230 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002995277 Q87NE9_nD2 107.1.1 176-190,336-475 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002995278 Q87NE9_nD1 107.1.1 41-230,251-335 'Cytochrome c' 'Cytochrome c' 'Cytochrome c-like' 'alpha arrays' 002995279 Q87N77_nD1 5085.1.1 31-420 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'Outer membrane efflux proteins (OEP)' 'a+b duplicates or obligate multimers' 002995280 Q87ME6_nD1 5094.1.1 26-165 'OmpH-like' 'OmpH-like' 'OmpH-like' 'a+b duplicates or obligate multimers' 002995281 Q87PT7_nD1 3706.1.1 51-225 'Conserved type six secretion component TssL-related' 'Conserved type six secretion component TssL-related' 'Conserved type six secretion component TssL-related' 'alpha bundles' 002995282 Q87PT7_nD2 3928.1.1 231-260 'Cell division protein CrgA' 'Cell division protein CrgA' 'Cell division protein CrgA' 'alpha bundles' 002995283 Q87M25_nD1 2011.2.1 1-235 'Peptidyl-tRNA hydrolase-like' 'Peptidyl-tRNA hydrolase-like' 'Phosphorylase/hydrolase-like' 'a/b three-layered sandwiches' 002995284 Q87TR1_nD1 1075.3.1 1-215 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002995285 Q87SV7_nD1 7564.1.1 11-210 'Homo-oligomeric flavin-containing Cys decarboxylases, HFCD' 'Homo-oligomeric flavin-containing Cys decarboxylases, HFCD' 'Homo-oligomeric flavin-containing Cys decarboxylases, HFCD' 'a/b three-layered sandwiches' 002995286 Q87HE7_nD1 9.1.1 21-173 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002995287 Q87L67_nD1 2004.1.1 6-170 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995288 Q87KG4_nD1 2004.1.1 6-645 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995289 Q87KG4_nD2 4.1.1 666-724 'SH3' 'SH3' 'SH3' 'beta barrels' 002995290 Q87MJ0_nD1 872.3.1 26-110 'YbjQ-like' 'YbjQ-like' 'Dodecin subunit-like' 'a+b two layers' 002995291 Q87SS7_nD2 330.6.1 391-510 '2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain' '2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain' 'dsRBD-like' 'a+b two layers' 002995292 Q87SS7_nD1 2002.1.1 1-380 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995293 Q87QL8_nD1 101.1.4 11-80 'tetra-helical, lambda repressor-like' 'HTH' 'HTH' 'alpha arrays' 002995294 Q87GF0_nD1 101.1.2 1-150 'winged' 'HTH' 'HTH' 'alpha arrays' 002995295 Q87LG1_nD1 5084.5.1 1-25 'Porin' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002995296 Q87N73_nD1 2003.1.5 6-230 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995297 Q87H60_nD3 2.1.1 396-455 'Nucleic acid-binding proteins' 'Nucleic acid-binding proteins' 'OB-fold' 'beta barrels' 002995298 Q87H60_nD2 129.1.1 261-390 '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' '6-phosphogluconate dehydrogenase C-terminal domain-like' 'alpha arrays' 002995299 Q87H60_nD1 2486.1.1 21-260 'ClpP/crotonase' 'ClpP/crotonase' 'ClpP/crotonase' 'a/b three-layered sandwiches' 002995300 Q87MR5_nD1 211.1.1 1-60 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002995301 Q87MR5_nD2 211.1.1 61-125 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase' 'a+b two layers' 002995302 Q87GS3_nD1 5051.1.1 6-410 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'Sodium:neurotransmitter symporter family (SNF)-like' 'alpha complex topology' 002995303 Q87RV6_nD1 6.1.1 26-80 'beta-Trefoil' 'beta-Trefoil' 'beta-Trefoil' 'beta duplicates or obligate multimers' 002995304 Q87RV6_nD2 9.1.1 116-170 'Lipocalins' 'Lipocalins' 'Lipocalins/Streptavidin' 'beta barrels' 002995305 Q87G70_nD2 101.1.3 151-220 'tetra-helical, LuxR-like' 'HTH' 'HTH' 'alpha arrays' 002995306 Q87G70_nD1 2007.1.3 1-150 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995307 Q87RR9_nD1 2006.1.1 1-180 'HAD-like' 'HAD domain-related' 'HAD domain-like' 'a/b three-layered sandwiches' 002995308 Q87L11_nD2 2488.1.1 81-245 'alpha/beta knot' 'alpha/beta knot' 'alpha/beta knot' 'a/b three-layered sandwiches' 002995309 Q87L11_nD1 301.1.1 6-80 'L30e-like' 'L30e-like' 'Bacillus chorismate mutase-like' 'a+b three layers' 002995310 Q87M52_nD3 7523.1.1 176-270 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995311 Q87M52_nD2 7523.1.1 86-175,271-305 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995312 Q87M52_nD1 101.1.2 1-85 'winged' 'HTH' 'HTH' 'alpha arrays' 002995313 Q87T75_nD1 601.1.1 21-130 'alpha-catenin/vinculin' 'alpha-catenin-related' 'Four-helical up-and-down bundle' 'alpha bundles' 002995314 Q87H89_nD2 101.1.2 126-220 'winged' 'HTH' 'HTH' 'alpha arrays' 002995315 Q87H89_nD1 2007.1.3 1-125 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995316 Q87JI1_nD1 5058.1.1 16-105 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'Mechanosensitive channel protein MscS (YggB), transmembrane region' 'alpha bundles' 002995317 Q87LE7_nD1 3745.1.1 1-320 'Sodium/Calcium exchanger' 'Sodium/Calcium exchanger' 'Sodium/Calcium exchanger' 'alpha bundles' 002995318 Q87QT3_nD1 601.37.1 41-170 'Photosystem II lipoprotein Psb27' 'Photosystem II lipoprotein Psb27' 'Four-helical up-and-down bundle' 'alpha bundles' 002995319 Q87NC1_nD1 316.1.1 11-130 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002995320 Q87NC1_nD2 601.7.1 131-250 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002995321 Q87FJ3_nD1 273.1.1 67-208 'PR-1-like' 'PR-1-like' 'PR-1-like' 'a+b three layers' 002995322 P40610_nD1 101.1.2 1-135 'winged' 'HTH' 'HTH' 'alpha arrays' 002995323 P22095_nD1 2002.1.1 1-268 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995324 Q87LS1_nD2 309.1.1 736-940 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002995325 Q87LS1_nD1 309.1.1 26-735 'LuxS/MPP-like metallohydrolase' 'LuxS, MPP, ThrRS/AlaRS common domain' 'LuxS, MPP, ThrRS/AlaRS common domain' 'a+b two layers' 002995326 Q87LE8_nD1 2004.1.1 6-265 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995327 Q87MC2_nD1 4198.1.1 111-220 'TerB-like' 'TerB-like' 'TerB-like' 'alpha arrays' 002995328 Q87NA8_nD2 213.1.1 116-375 'Acyl-CoA N-acyltransferases (Nat)' 'Acyl-CoA N-acyltransferases (Nat)' 'Nat/Ivy' 'a+b three layers' 002995329 Q87NA8_nD1 189.1.1 1-115 'GTPase activation domain, GAP' 'GTPase activation domain, GAP' 'GTPase activation domain, GAP' 'alpha bundles' 002995330 Q87J40_nD1 2005.1.1 1-175 'HUP domains' 'HUP domains' 'HUP domain-like' 'a/b three-layered sandwiches' 002995331 Q87K43_nD4 11.1.1 601-690 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995332 Q87K43_nD3 284.2.1 466-495 'Chitinase insertion domain' 'Chitinase insertion domain' 'FKBP-like' 'a+b two layers' 002995333 Q87K43_nD5 11.1.1 701-785 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995334 Q87K43_nD2 2002.1.1 136-465,496-600 'TIM barrels' 'TIM barrels' 'TIM beta/alpha-barrel' 'a/b barrels' 002995335 Q87K43_nD6 64.3.1 796-845 'Carbohydrate binding domain' 'Carbohydrate binding domain' 'WW domain-like' 'beta meanders' 002995336 Q87K43_nD1 11.1.1 21-135 'Immunoglobulin/Fibronectin type III/E set domains/PapD-like' 'Immunoglobulin-related' 'Immunoglobulin-like beta-sandwich' 'beta sandwiches' 002995337 Q87HP3_nD1 109.43.1 66-150 'Helical insertion in sensor domain of histidine kinase VC_A0565' 'Helical insertion in sensor domain of histidine kinase VC_A0565' 'Repetitive alpha hairpins' 'alpha superhelices' 002995338 Q87HP3_nD5 225.1.1 346-480 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002995339 Q87HP3_nD2 6156.1.1 21-65,151-240 'Sensor domain of histidine kinase VC_A0565' 'Sensor domain of histidine kinase VC_A0565' 'Sensor domain of histidine kinase VC_A0565' 'a+b three layers' 002995340 Q87HP3_nD4 605.1.1 286-340 'Homodimeric domain of signal transducing histidine kinase' 'Homodimeric domain of signal transducing histidine kinase' 'ROP-like' 'alpha duplicates or obligate multimers' 002995341 Q87HP3_nD3 633.15.1 246-270 'alpha-ketoacid dehydrogenase kinase-N' 'alpha-ketoacid dehydrogenase kinase-N' 'Bromodomain-like' 'alpha bundles' 002995342 Q87SA6_nD1 2008.1.1 1-220 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'Restriction endonuclease-like' 'a/b three-layered sandwiches' 002995343 Q87SW4_nD1 7026.1.1 21-115 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'N-terminal region of lipid transporter Vps13' 'beta meanders' 002995344 Q87SW4_nD6 5084.1.1 1181-1250 'OMPA-like' 'OMPA-like' 'Outer membrane meander beta-barrels' 'beta barrels' 002995345 Q87SW4_nD5 5084.5.3 1026-1130 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002995346 Q87SW4_nD2 5084.5.3 141-190,216-300 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002995347 Q87SW4_nD4 5084.5.3 461-475,496-985,1016-1025 'Ligand-gated protein channel' 'Porins' 'Outer membrane meander beta-barrels' 'beta barrels' 002995348 Q87SW4_nD3 77.1.1 301-440,476-495 'Outer surface protein' 'Outer surface protein' 'open-sided beta-meander' 'beta meanders' 002995349 Q87HB6_nD2 210.2.1 156-395 'Protein serine/threonine phosphatase 2C, catalytic domain' 'Protein serine/threonine phosphatase 2C, catalytic domain' 'Ntn/PP2C' 'a+b four layers' 002995350 Q87HB6_nD1 2007.1.3 1-135 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995351 Q87L05_nD4 4337.1.1 486-520,621-669 'DNA mismatch repair protein MutL dimerization subdomain' 'DNA mismatch repair protein MutL dimerization subdomain' 'DNA mismatch repair protein MutL dimerization subdomain' 'a+b two layers' 002995352 Q87L05_nD3 327.19.1 526-620 'DNA mismatch repair protein MutL regulatory subdomain' 'DNA mismatch repair protein MutL regulatory subdomain' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002995353 Q87L05_nD1 225.1.1 6-200 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase' 'ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like' 'a+b two layers' 002995354 Q87L05_nD2 212.1.1 221-330 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'Ribosomal protein S5 domain 2-like' 'a+b two layers' 002995355 Q87LR0_nD1 7520.1.1 1-160 'CinA-like' 'CinA-like' 'CinA-like' 'a/b three-layered sandwiches' 002995356 Q87S47_nD1 604.5.1 6-225 'PhoU-like (Pfam 01895)' 'PhoU-like (Pfam 01895)' 'Spectrin repeat-like' 'alpha bundles' 002995357 Q87R95_nD3 217.2.1 351-435 'CorC/HlyC domain-like' 'CorC/HlyC domain-like' 'FAD-binding domain-like' 'a+b complex topology' 002995358 Q87R95_nD1 7064.1.1 1-175 'Transmembrane domain of VIT1' 'Transmembrane domain of VIT1' 'Transmembrane domain of VIT1' 'alpha bundles' 002995359 Q87R95_nD2 282.1.1 186-345 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002995360 Q87T81_nD1 3504.2.1 6-130 'N-terminal domain of MutM-like DNA repair proteins' 'N-terminal domain of MutM-like DNA repair proteins' 'MutM N-terminal domain-like' 'beta barrels' 002995361 Q87T81_nD2 102.2.1 131-220 'H2TH' 'H2TH' 'HhH/H2TH' 'alpha arrays' 002995362 Q87T81_nD3 377.2.1 221-269 'C-terminal, Zn-finger domain of MutM-like DNA repair proteins' 'C-terminal, Zn-finger domain of MutM-like DNA repair proteins' 'Glucocorticoid receptor-like' 'few secondary structure elements' 002995363 Q87MK5_nD2 7548.1.1 171-369 'Methylesterase CheB, C-terminal domain' 'Methylesterase CheB, C-terminal domain' 'Methylesterase CheB, C-terminal domain' 'a/b three-layered sandwiches' 002995364 Q87MK5_nD1 2007.1.3 1-140 'CheY-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995365 Q87Q21_nD1 7524.1.1 6-505 'ALDH-like' 'ALDH-like' 'ALDH-like' 'a/b three-layered sandwiches' 002995366 Q87SU2_nD1 710.1.1 11-150 'Obg GTP-binding protein N-terminal domain' 'Obg GTP-binding protein N-terminal domain' 'Obg GTP-binding protein N-terminal domain' 'beta complex topology' 002995367 Q87SU2_nD2 2004.1.1 156-364 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995368 Q87SK5_nD1 3226.1.1 6-415 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'Uracil Transporter UraA' 'alpha complex topology' 002995369 Q87KG1_nD2 101.1.2 136-250 'winged' 'HTH' 'HTH' 'alpha arrays' 002995370 Q87KG1_nD1 3552.1.1 6-125 'Pfam family PF09836 N-terminal domain' 'Pfam family PF09836 N-terminal domain' 'Pfam family PF09836 N-terminal domain' 'alpha arrays' 002995371 Q87L42_nD1 7545.1.1 1-90 'YchN-like' 'YchN-like' 'YchN-like' 'a/b three-layered sandwiches' 002995372 Q87KP1_nD1 2007.1.5 6-100 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995373 Q87KP1_nD2 2007.1.5 101-260 'ATC-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995374 Q87G47_nD3 3743.1.1 281-305 'L,D-transpeptidase C-terminal domain' 'L,D-transpeptidase C-terminal domain' 'L,D-transpeptidase C-terminal domain' 'a+b two layers' 002995375 Q87G47_nD1 101.15.1 31-95 'LysM domain' 'LysM domain' 'HTH' 'alpha arrays' 002995376 Q87G47_nD2 4091.1.1 96-280 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'L,D-transpeptidase catalytic domain-like' 'beta complex topology' 002995377 Q87KM0_nD1 2003.1.5 6-195 'S-adenosyl-L-methionine-dependent methyltransferases' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995378 Q87I41_nD1 299.1.1 71-220 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'YbaK/ProRS associated domain' 'a+b complex topology' 002995379 Q87TI7_nD1 5002.1.1 26-50 'Photosystem II reaction centre subunit H, transmembrane region' 'Photosystem II reaction centre subunit H, transmembrane region' 'Photosystem II reaction centre subunit H, transmembrane region' 'extended segments' 002995380 Q87T22_nD1 141.1.1 1-305 'Terpenoid synthases' 'Terpenoid synthases' 'Terpenoid synthases' 'alpha bundles' 002995381 Q87PR4_nD1 322.1.1 6-30 'HPr-like' 'HPr-like' 'HPr-like' 'a+b two layers' 002995382 Q87RD7_nD1 312.1.1 6-148 'HIT-related' 'HIT-related' 'HIT-like' 'a+b three layers' 002995383 Q87HT1_nD1 10.12.1 6-180 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002995384 Q87HT1_nD2 75.1.1 181-305 'Cyclophilin-like' 'Cyclophilin-like' 'Cyclophilin-like' 'beta barrels' 002995385 Q87T19_nD1 304.14.1 101-180 'Sporulation related repeat (SPOR)' 'Sporulation related repeat (SPOR)' 'Alpha-beta plaits' 'a+b two layers' 002995386 Q87LU2_nD3 7522.1.1 701-885 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'TK C-terminal domain-like' 'a/b three-layered sandwiches' 002995387 Q87LU2_nD2 7574.1.1 471-700 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002995388 Q87LU2_nD1 7574.1.1 6-470 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'Thiamin diphosphate-binding fold (THDP-binding)' 'a/b three-layered sandwiches' 002995389 Q87GG8_nD1 101.1.2 1-105 'winged' 'HTH' 'HTH' 'alpha arrays' 002995390 Q87S12_nD1 2004.1.1 1-175 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995391 Q87S12_nD2 2004.1.1 176-385 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995392 Q87S12_nD3 327.9.1 386-480 'Probable GTPase Der, C-terminal domain' 'Probable GTPase Der, C-terminal domain' 'Alpha-lytic protease prodomain-like' 'a+b two layers' 002995393 Q87JM4_nD2 304.128.1 306-360,476-520 'ferredoxin-like domain in periplasmic region of MacB' 'ferredoxin-like domain in periplasmic region of MacB' 'Alpha-beta plaits' 'a+b two layers' 002995394 Q87JM4_nD1 2004.1.1 1-240 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995395 Q87JM4_nD3 1.1.2 361-475 'double psi' 'RIFT-related' 'cradle loop barrel' 'beta barrels' 002995396 Q87JM4_nD4 1075.1.2 256-305,521-654 'MacB transmembrane domain' 'Type II ABC exporter transmembrane domain-related' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002995397 Q87ST3_nD1 3523.1.1 31-215 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'Periplasmic lipopolysaccharide transport protein LptA (YhbN)' 'beta meanders' 002995398 Q87ST3_nD2 5084.10.1 216-775 'LPS-assembly protein LptD' 'LPS-assembly protein LptD' 'Outer membrane meander beta-barrels' 'beta barrels' 002995399 Q87M69_nD1 4121.1.1 1-245 'CorA soluble domain-like' 'CorA soluble domain-like' 'CorA soluble domain-like' 'a+b three layers' 002995400 Q87M69_nD2 5042.1.1 246-305 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'Magnesium transport protein CorA, transmembrane region' 'extended segments' 002995401 P46234_nD1 109.4.1 1-144 'ARM repeat' 'ARM repeat' 'Repetitive alpha hairpins' 'alpha superhelices' 002995402 Q87GH6_nD1 3567.1.1 46-75 'MPER trimer' 'MPER trimer' 'MPER trimer' 'a+b duplicates or obligate multimers' 002995403 Q87QB4_nD2 2007.6.1 76-280 'Ribosomal protein S2/SIS domain' 'Ribosomal protein S2/SIS domain' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995404 Q87QB4_nD1 101.1.1 1-75 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002995405 Q87RB6_nD1 7581.1.1 6-255 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002995406 Q87RB6_nD2 7581.1.1 256-405 'Thiolase-like' 'Thiolase-like' 'Thiolase-like' 'a/b three-layered sandwiches' 002995407 Q87IG3_nD1 2003.1.2 1-455 'FAD/NAD(P)-binding domain' 'Rossmann-related' 'Rossmann-like' 'a/b three-layered sandwiches' 002995408 Q87IG3_nD2 205.1.1 456-550 '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' '4Fe-4S ferredoxin' 'a+b two layers' 002995409 Q87SH3_nD2 1137.1.1 121-235 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain' 'Tetrapyrrole methylase C-terminal domain-like' 'a+b two layers' 002995410 Q87SH3_nD1 7550.1.1 11-120 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'Tetrapyrrole methylase N-terminal domain' 'a/b three-layered sandwiches' 002995411 Q87SH3_nD3 101.1.1 241-285 'tri-helical' 'HTH' 'HTH' 'alpha arrays' 002995412 Q87NZ3_nD4 601.7.1 476-620 'Nucleotidyltransferase substrate binding subunit/domain' 'HEPN' 'Four-helical up-and-down bundle' 'alpha bundles' 002995413 Q87NZ3_nD3 316.1.1 291-475 'Nucleotidyltransferase' 'Nucleotidyltransferase' 'Nucleotidyltransferase-like' 'a+b three layers' 002995414 Q87NZ3_nD2 282.1.1 146-290 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002995415 Q87NZ3_nD1 10.12.1 6-140 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002995416 Q87FW5_nD1 101.1.9 1-135 'Putative DNA-binding domain' 'HTH' 'HTH' 'alpha arrays' 002995417 Q87LX7_nD2 912.1.1 301-325 'HIV-1 VPU cytoplasmic domain' 'HIV-1 VPU cytoplasmic domain' 'HIV-1 VPU cytoplasmic domain' 'few secondary structure elements' 002995418 Q87LX7_nD1 1075.3.1 11-40,86-300 'Type I ABC importer transmembrane domain fold' 'Type I ABC importer transmembrane domain fold' 'Type II ABC exporter transmembrane domain fold' 'alpha bundles' 002995419 Q87G66_nD1 2004.1.1 1-215 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995420 Q87G66_nD2 148.1.3 216-315 'AAA+ ATPase lid domain' 'Histone-related' 'Histone-like' 'alpha arrays' 002995421 Q9ALY5_nD1 10.12.1 11-135 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002995422 Q9ALY5_nD2 101.1.2 136-210 'winged' 'HTH' 'HTH' 'alpha arrays' 002995423 Q87SE7_nD1 2007.1.14 21-140 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995424 Q87SE7_nD2 2007.1.14 141-275 'Chelatase-like' 'Class I glutamine amidotransferase-like' 'Flavodoxin-like' 'a/b three-layered sandwiches' 002995425 Q87QT1_nD1 635.1.1 11-200 'YgfB-like' 'YgfB-like' 'YgfB-like' 'alpha arrays' 002995426 Q87IZ9_nD2 7523.1.1 81-295 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'Periplasmic binding protein-like II' 'a/b three-layered sandwiches' 002995427 Q87IZ9_nD1 101.1.2 1-80 'winged' 'HTH' 'HTH' 'alpha arrays' 002995428 Q87RH1_nD1 304.17.1 1-110 'N-utilization substance G protein NusG, N-terminal domain' 'N-utilization substance G protein NusG, N-terminal domain' 'Alpha-beta plaits' 'a+b two layers' 002995429 Q87RH1_nD2 4.1.1 111-165 'SH3' 'SH3' 'SH3' 'beta barrels' 002995430 Q87N11_nD1 2004.1.1 6-200 'P-loop containing nucleoside triphosphate hydrolases' 'P-loop domains-related' 'P-loop domains-like' 'a/b three-layered sandwiches' 002995431 Q87MP6_nD1 210.1.3 1-250 'Class II glutamine amidotransferases' 'Ntn' 'Ntn/PP2C' 'a+b four layers' 002995432 Q87MP6_nD2 7573.1.1 251-475 'PRTase-like' 'PRTase-like' 'PRTase-like' 'a/b three-layered sandwiches' 002995433 Q87P91_nD1 304.110.1 1-90 'Acylphosphatase-like' 'Acylphosphatase-like' 'Alpha-beta plaits' 'a+b two layers' 002995434 Q87PS9_nD1 10.12.1 1-200 'Double-stranded beta-helix' 'Double-stranded beta-helix' 'jelly-roll' 'beta sandwiches' 002995435 Q87S39_nD1 282.1.1 1-135 'CBS-domain' 'CBS-domain' 'CBS-domain' 'a+b duplicates or obligate multimers' 002995436 Q87PK5_nD1 7516.1.1 1-190 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'Nucleotide-diphospho-sugar transferases' 'a/b three-layered sandwiches' #uid id t_id range t_name h_name x_name