ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kj8A3 - ECOD Domain | ECOD

ECOD/Domains/e1kj8A3

e1kj8A3

UID: 000100146

PDB

Range: A:2-112
PDB: 1KJ8 chain A(all domains)
UniProt: P33221 (all domains)
Gene: purT

Molecule: phosphoribosylglycinamide formyltransferase 2

3D Structure

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Related Domains

Browse other domains in RS_preATP-grasp-like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupPreATP-grasp domain(2003.1.10)

FFamilyRS_preATP-grasp-like(2003.1.10.24)

Ligands

in contact, ≤ 4 Å

Glycinamide RibonucleotideGAR
drugDrugBank DB02236
3-(N-morpholino)propanesulfonic acidMPO
drugDrugBank DB03434

Pfam Families

PF22660RS_preATP-grasp-like

Ribonucleotide synthetase preATP-grasp domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 1KJ8 RCSB PDB: 1KJ8 PDBe: 1KJ8 UniProt: P33221

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

ATPATP

drugDrugBank DB00171within 5 Å only

Chloride ionCL

Sodium ionNA

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.