ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sxjE5 - ECOD Domain | ECOD

ECOD/Domains/e1sxjE5

e1sxjE5

UID: 001002410

RepresentativePDB

Range: E:193-255
PDB: 1SXJ chain E(all domains)
UniProt: P38251 (all domains)
Gene: RFC5

Molecule: Activator 1 40 kDa subunit

3D Structure

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Related Domains

Browse other domains in RCF1-5-like_lid →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyRCF1-5-like_lid(148.1.3.42)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930within 5 Å only

Pfam Families

PF21960RCF1-5-like_lid

RCF1/5-like, AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 1SXJ RCSB PDB: 1SXJ PDBe: 1SXJ UniProt: P38251

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.