ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2zwsA1 - ECOD Domain | ECOD

ECOD/Domains/e2zwsA1

e2zwsA1

UID: 001002454

RepresentativePDB

Range: A:1-511
PDB: 2ZWS chain A(all domains)
UniProt: Q9I596 (all domains)
Gene: PA0845

Molecule: Neutral ceramidase

3D Structure

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Related Domains

Browse other domains in Ceramidase_alk →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMocoBD/DmpA-related(231)

HH-groupMocoBD/DmpA-related(231.1)

TT-groupNeutral ceramidase large domain(231.1.3)

FFamilyCeramidase_alk(231.1.3.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796
Magnesium ionMG
metal
Zinc ionZN

Pfam Families

PF04734Ceramidase_alk

Neutral/alkaline non-lysosomal ceramidase, N-terminal

ClanCL0635DmpA_ArgJ

External Links

ECOD PDB View: 2ZWS RCSB PDB: 2ZWS PDBe: 2ZWS UniProt: Q9I596

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 2 additives (Formic acid, Glycerin)

Formic acidFMT
DrugBank DB01942
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.