ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vepX1 - ECOD Domain | ECOD

ECOD/Domains/e3vepX1

e3vepX1

UID: 001005371

PDB

Range: X:1-46
PDB: 3VEP chain X(all domains)
UniProt: P9WJ71 (all domains)
Gene: rsdA

Molecule: Uncharacterized protein Rv3413c/MT3522

3D Structure

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Related Domains

Browse other domains in RsdA_SigD_bd →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNegative regulator RsdA N-terminal domain(3668)

HH-groupNegative regulator RsdA N-terminal domain(3668.1)

TT-groupNegative regulator RsdA N-terminal domain(3668.1.1)

FFamilyRsdA_SigD_bd(3668.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16751RsdA_SigD_bd

Anti-sigma-D factor RsdA to sigma factor binding region

External Links

ECOD PDB View: 3VEP RCSB PDB: 3VEP PDBe: 3VEP UniProt: P9WJ71

Downloads

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