ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3vepJ1 - ECOD Domain | ECOD

ECOD/Domains/e3vepJ1

e3vepJ1

UID: 001005372

PDB

Range: J:1-47
PDB: 3VEP chain J(all domains)
UniProt: P9WJ71 (all domains)
Gene: rsdA

Molecule: Uncharacterized protein Rv3413c/MT3522

3D Structure

Loading viewer...

Related Domains

Browse other domains in RsdA_SigD_bd →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNegative regulator RsdA N-terminal domain(3668)

HH-groupNegative regulator RsdA N-terminal domain(3668.1)

TT-groupNegative regulator RsdA N-terminal domain(3668.1.1)

FFamilyRsdA_SigD_bd(3668.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16751RsdA_SigD_bd

Anti-sigma-D factor RsdA to sigma factor binding region

External Links

ECOD PDB View: 3VEP RCSB PDB: 3VEP PDBe: 3VEP UniProt: P9WJ71

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure